BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00005009
         (415 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002871281.1| structural maintenance of chromosomes family...   109   3e-22
ref|XP_006279856.1| hypothetical protein CARUB_v10028478mg [Caps...   108   7e-22
ref|XP_002866437.1| hypothetical protein ARALYDRAFT_496305 [Arab...   108   1e-21
ref|XP_006355548.1| PREDICTED: structural maintenance of chromos...   107   1e-21
ref|XP_004240011.1| PREDICTED: structural maintenance of chromos...   107   1e-21
ref|NP_196383.1| structural maintenance of chromosomes 6A [Arabi...   107   2e-21
gb|ACQ84165.1| truncated structural maintenance of chromosomes f...   107   2e-21
ref|XP_006394503.1| hypothetical protein EUTSA_v10003566mg [Eutr...   107   2e-21
ref|XP_006286959.1| hypothetical protein CARUB_v10000108mg [Caps...   106   3e-21
ref|NP_200954.1| protein SMC6B [Arabidopsis thaliana] gi|7533391...   106   3e-21
ref|XP_003576935.1| PREDICTED: structural maintenance of chromos...   106   3e-21
ref|XP_006421634.1| hypothetical protein CICLE_v100042042mg, par...   106   4e-21
ref|XP_004956326.1| PREDICTED: structural maintenance of chromos...   105   5e-21
ref|XP_004956325.1| PREDICTED: structural maintenance of chromos...   105   5e-21
ref|XP_006490140.1| PREDICTED: structural maintenance of chromos...   104   1e-20
gb|EXC13936.1| hypothetical protein L484_006634 [Morus notabilis]     103   2e-20
ref|XP_006399247.1| hypothetical protein EUTSA_v10012532mg [Eutr...   103   2e-20
gb|EMT14242.1| Structural maintenance of chromosomes protein 6 [...   103   2e-20
ref|XP_004514508.1| PREDICTED: structural maintenance of chromos...   103   2e-20
gb|AAD54769.1|AF120932_1 SMC-like protein [Arabidopsis thaliana]...   103   3e-20

>ref|XP_002871281.1| structural maintenance of chromosomes family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297317118|gb|EFH47540.1|
           structural maintenance of chromosomes family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1063

 Score =  109 bits (273), Expect = 3e-22
 Identities = 51/59 (86%), Positives = 56/59 (94%)
 Frame = +2

Query: 239 AAGTISRIRVENFMCHSNMEIEFGDYVNFITGQNGSGKSAILTALCVAFGCRPRSTQRA 415
           ++GTI RIR+ENFMCHSN+EIEFGD+VNFITGQNGSGKSAILTALCVAFGCR R TQRA
Sbjct: 18  SSGTIVRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTALCVAFGCRARGTQRA 76


>ref|XP_006279856.1| hypothetical protein CARUB_v10028478mg [Capsella rubella]
           gi|482548560|gb|EOA12754.1| hypothetical protein
           CARUB_v10028478mg [Capsella rubella]
          Length = 1057

 Score =  108 bits (270), Expect = 7e-22
 Identities = 53/76 (69%), Positives = 60/76 (78%)
 Frame = +2

Query: 188 MADSMELGEGSRMSSSAAAGTISRIRVENFMCHSNMEIEFGDYVNFITGQNGSGKSAILT 367
           MA S      S +   + +GTI RI VENFMCHSN++IEFG++VNFITGQNGSGKSAILT
Sbjct: 1   MAKSGSRASDSFIKQRSGSGTILRITVENFMCHSNLQIEFGEWVNFITGQNGSGKSAILT 60

Query: 368 ALCVAFGCRPRSTQRA 415
           ALCVAFGCR R TQRA
Sbjct: 61  ALCVAFGCRARGTQRA 76


>ref|XP_002866437.1| hypothetical protein ARALYDRAFT_496305 [Arabidopsis lyrata subsp.
           lyrata] gi|297312272|gb|EFH42696.1| hypothetical protein
           ARALYDRAFT_496305 [Arabidopsis lyrata subsp. lyrata]
          Length = 1057

 Score =  108 bits (269), Expect = 1e-21
 Identities = 53/72 (73%), Positives = 61/72 (84%), Gaps = 5/72 (6%)
 Frame = +2

Query: 215 GSRMSSS-----AAAGTISRIRVENFMCHSNMEIEFGDYVNFITGQNGSGKSAILTALCV 379
           G+R S S     + +GTI RI+VENFMCHSN++IEFG++VNFITGQNGSGKSAILTALCV
Sbjct: 5   GARASDSFIKQRSGSGTILRIKVENFMCHSNLQIEFGEWVNFITGQNGSGKSAILTALCV 64

Query: 380 AFGCRPRSTQRA 415
           AFGCR R TQRA
Sbjct: 65  AFGCRARGTQRA 76


>ref|XP_006355548.1| PREDICTED: structural maintenance of chromosomes protein 6B-like
           [Solanum tuberosum]
          Length = 1054

 Score =  107 bits (268), Expect = 1e-21
 Identities = 54/76 (71%), Positives = 61/76 (80%)
 Frame = +2

Query: 188 MADSMELGEGSRMSSSAAAGTISRIRVENFMCHSNMEIEFGDYVNFITGQNGSGKSAILT 367
           MAD +  G   R+     AG IS+IR+ENFMCHSN+EI+FGD+VNFITGQNGSGKSAILT
Sbjct: 1   MADRVPTGRPKRLQ----AGIISKIRLENFMCHSNLEIDFGDWVNFITGQNGSGKSAILT 56

Query: 368 ALCVAFGCRPRSTQRA 415
           ALCVAFG R R TQRA
Sbjct: 57  ALCVAFGSRARGTQRA 72


>ref|XP_004240011.1| PREDICTED: structural maintenance of chromosomes protein 6-like
           [Solanum lycopersicum]
          Length = 1054

 Score =  107 bits (268), Expect = 1e-21
 Identities = 54/76 (71%), Positives = 61/76 (80%)
 Frame = +2

Query: 188 MADSMELGEGSRMSSSAAAGTISRIRVENFMCHSNMEIEFGDYVNFITGQNGSGKSAILT 367
           MAD +  G   R+     AG IS+IR+ENFMCHSN+EI+FGD+VNFITGQNGSGKSAILT
Sbjct: 1   MADRVPTGRPKRLQ----AGIISKIRLENFMCHSNLEIDFGDWVNFITGQNGSGKSAILT 56

Query: 368 ALCVAFGCRPRSTQRA 415
           ALCVAFG R R TQRA
Sbjct: 57  ALCVAFGSRARGTQRA 72


>ref|NP_196383.1| structural maintenance of chromosomes 6A [Arabidopsis thaliana]
           gi|75171524|sp|Q9FLR5.1|SMC6A_ARATH RecName:
           Full=Structural maintenance of chromosomes protein 6A
           gi|9759587|dbj|BAB11444.1| SMC-like protein [Arabidopsis
           thaliana] gi|332003807|gb|AED91190.1| structural
           maintenance of chromosomes 6A [Arabidopsis thaliana]
          Length = 1058

 Score =  107 bits (267), Expect = 2e-21
 Identities = 50/59 (84%), Positives = 55/59 (93%)
 Frame = +2

Query: 239 AAGTISRIRVENFMCHSNMEIEFGDYVNFITGQNGSGKSAILTALCVAFGCRPRSTQRA 415
           ++G I RIR+ENFMCHSN+EIEFGD+VNFITGQNGSGKSAILTALCVAFGCR R TQRA
Sbjct: 19  SSGKILRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTALCVAFGCRARGTQRA 77


>gb|ACQ84165.1| truncated structural maintenance of chromosomes family protein 6A
           [Arabidopsis thaliana]
          Length = 876

 Score =  107 bits (267), Expect = 2e-21
 Identities = 50/59 (84%), Positives = 55/59 (93%)
 Frame = +2

Query: 239 AAGTISRIRVENFMCHSNMEIEFGDYVNFITGQNGSGKSAILTALCVAFGCRPRSTQRA 415
           ++G I RIR+ENFMCHSN+EIEFGD+VNFITGQNGSGKSAILTALCVAFGCR R TQRA
Sbjct: 19  SSGKILRIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTALCVAFGCRARGTQRA 77


>ref|XP_006394503.1| hypothetical protein EUTSA_v10003566mg [Eutrema salsugineum]
           gi|557091142|gb|ESQ31789.1| hypothetical protein
           EUTSA_v10003566mg [Eutrema salsugineum]
          Length = 1057

 Score =  107 bits (266), Expect = 2e-21
 Identities = 51/76 (67%), Positives = 61/76 (80%)
 Frame = +2

Query: 188 MADSMELGEGSRMSSSAAAGTISRIRVENFMCHSNMEIEFGDYVNFITGQNGSGKSAILT 367
           MA S      S +   + +GTI RI++ENFMCHSN++IEFG++VNFITGQNGSGKSAILT
Sbjct: 1   MAKSAARPSDSFIKQRSGSGTILRIKLENFMCHSNLQIEFGEWVNFITGQNGSGKSAILT 60

Query: 368 ALCVAFGCRPRSTQRA 415
           ALCVAFGCR + TQRA
Sbjct: 61  ALCVAFGCRAKGTQRA 76


>ref|XP_006286959.1| hypothetical protein CARUB_v10000108mg [Capsella rubella]
           gi|482555665|gb|EOA19857.1| hypothetical protein
           CARUB_v10000108mg [Capsella rubella]
          Length = 1052

 Score =  106 bits (265), Expect = 3e-21
 Identities = 49/56 (87%), Positives = 54/56 (96%)
 Frame = +2

Query: 248 TISRIRVENFMCHSNMEIEFGDYVNFITGQNGSGKSAILTALCVAFGCRPRSTQRA 415
           TI+RIR+ENFMCHSN+EIEFGD+VNFITGQNGSGKSAILTALCVAFGCR + TQRA
Sbjct: 17  TIARIRLENFMCHSNLEIEFGDWVNFITGQNGSGKSAILTALCVAFGCRAKGTQRA 72


>ref|NP_200954.1| protein SMC6B [Arabidopsis thaliana]
           gi|75333915|sp|Q9FII7.1|SMC6B_ARATH RecName:
           Full=Structural maintenance of chromosomes protein 6B;
           AltName: Full=DNA repair protein RAD18; Short=AtRAD18
           gi|10177176|dbj|BAB10445.1| SMC-like protein
           [Arabidopsis thaliana] gi|332010088|gb|AED97471.1|
           protein SMC6B [Arabidopsis thaliana]
          Length = 1057

 Score =  106 bits (265), Expect = 3e-21
 Identities = 52/72 (72%), Positives = 61/72 (84%), Gaps = 5/72 (6%)
 Frame = +2

Query: 215 GSRMSSS-----AAAGTISRIRVENFMCHSNMEIEFGDYVNFITGQNGSGKSAILTALCV 379
           G+R S S     + +G+I RI+VENFMCHSN++IEFG++VNFITGQNGSGKSAILTALCV
Sbjct: 5   GARASDSFIKQRSGSGSILRIKVENFMCHSNLQIEFGEWVNFITGQNGSGKSAILTALCV 64

Query: 380 AFGCRPRSTQRA 415
           AFGCR R TQRA
Sbjct: 65  AFGCRARGTQRA 76


>ref|XP_003576935.1| PREDICTED: structural maintenance of chromosomes protein 6-like
           [Brachypodium distachyon]
          Length = 1039

 Score =  106 bits (265), Expect = 3e-21
 Identities = 49/58 (84%), Positives = 55/58 (94%)
 Frame = +2

Query: 242 AGTISRIRVENFMCHSNMEIEFGDYVNFITGQNGSGKSAILTALCVAFGCRPRSTQRA 415
           AGTISRIR+ENFMCHS++ IE GD+VNFITGQNGSGKSAILTALC+AFGCR +STQRA
Sbjct: 2   AGTISRIRLENFMCHSSLHIELGDHVNFITGQNGSGKSAILTALCIAFGCRAKSTQRA 59


>ref|XP_006421634.1| hypothetical protein CICLE_v100042042mg, partial [Citrus
           clementina] gi|557523507|gb|ESR34874.1| hypothetical
           protein CICLE_v100042042mg, partial [Citrus clementina]
          Length = 484

 Score =  106 bits (264), Expect = 4e-21
 Identities = 53/92 (57%), Positives = 65/92 (70%), Gaps = 4/92 (4%)
 Frame = +2

Query: 152 LVQGTTFLGCAL----MADSMELGEGSRMSSSAAAGTISRIRVENFMCHSNMEIEFGDYV 319
           L   T FLG       M D   + E       + AGTI+R+R+ENFMCHS+++IE G++V
Sbjct: 46  LSSATKFLGLRRGGKRMGDYRFISESGYGPQRSGAGTITRVRLENFMCHSSLQIELGEWV 105

Query: 320 NFITGQNGSGKSAILTALCVAFGCRPRSTQRA 415
           NFITGQNGSGKSAILTALC+AFGCR + TQRA
Sbjct: 106 NFITGQNGSGKSAILTALCIAFGCRAKGTQRA 137


>ref|XP_004956326.1| PREDICTED: structural maintenance of chromosomes protein 6-like
           isoform X2 [Setaria italica]
          Length = 882

 Score =  105 bits (263), Expect = 5e-21
 Identities = 49/59 (83%), Positives = 56/59 (94%)
 Frame = +2

Query: 239 AAGTISRIRVENFMCHSNMEIEFGDYVNFITGQNGSGKSAILTALCVAFGCRPRSTQRA 415
           AAGTISRIR+ENFMCHS++ IE G++VNFITGQNGSGKSAILTALCVAFGCR ++TQRA
Sbjct: 2   AAGTISRIRLENFMCHSSLHIELGEHVNFITGQNGSGKSAILTALCVAFGCRAKNTQRA 60


>ref|XP_004956325.1| PREDICTED: structural maintenance of chromosomes protein 6-like
           isoform X1 [Setaria italica]
          Length = 1040

 Score =  105 bits (263), Expect = 5e-21
 Identities = 49/59 (83%), Positives = 56/59 (94%)
 Frame = +2

Query: 239 AAGTISRIRVENFMCHSNMEIEFGDYVNFITGQNGSGKSAILTALCVAFGCRPRSTQRA 415
           AAGTISRIR+ENFMCHS++ IE G++VNFITGQNGSGKSAILTALCVAFGCR ++TQRA
Sbjct: 2   AAGTISRIRLENFMCHSSLHIELGEHVNFITGQNGSGKSAILTALCVAFGCRAKNTQRA 60


>ref|XP_006490140.1| PREDICTED: structural maintenance of chromosomes protein 6B-like
           [Citrus sinensis]
          Length = 1058

 Score =  104 bits (260), Expect = 1e-20
 Identities = 50/73 (68%), Positives = 61/73 (83%)
 Frame = +2

Query: 197 SMELGEGSRMSSSAAAGTISRIRVENFMCHSNMEIEFGDYVNFITGQNGSGKSAILTALC 376
           S E G G + S    AGTI+R+R+ENFMCHS+++IE G++VNFITGQNGSGKSAILTALC
Sbjct: 7   SSESGYGPQRSG---AGTITRVRLENFMCHSSLQIELGEWVNFITGQNGSGKSAILTALC 63

Query: 377 VAFGCRPRSTQRA 415
           +AFGCR + TQRA
Sbjct: 64  IAFGCRAKGTQRA 76


>gb|EXC13936.1| hypothetical protein L484_006634 [Morus notabilis]
          Length = 1025

 Score =  103 bits (258), Expect = 2e-20
 Identities = 52/67 (77%), Positives = 56/67 (83%), Gaps = 3/67 (4%)
 Frame = +2

Query: 224 MSSSAA---AGTISRIRVENFMCHSNMEIEFGDYVNFITGQNGSGKSAILTALCVAFGCR 394
           MSSS     AG + RIR+ENFMCHSN+EIE GD VNFITGQNGSGKSAILTALCVAFGCR
Sbjct: 5   MSSSIERPKAGIVKRIRLENFMCHSNLEIELGDRVNFITGQNGSGKSAILTALCVAFGCR 64

Query: 395 PRSTQRA 415
            + TQRA
Sbjct: 65  AKGTQRA 71


>ref|XP_006399247.1| hypothetical protein EUTSA_v10012532mg [Eutrema salsugineum]
           gi|557100337|gb|ESQ40700.1| hypothetical protein
           EUTSA_v10012532mg [Eutrema salsugineum]
          Length = 1057

 Score =  103 bits (258), Expect = 2e-20
 Identities = 47/60 (78%), Positives = 55/60 (91%)
 Frame = +2

Query: 236 AAAGTISRIRVENFMCHSNMEIEFGDYVNFITGQNGSGKSAILTALCVAFGCRPRSTQRA 415
           + +G I R+R+ENFMCHSN+EIEFG++VNFITGQNGSGKSAILTALCVAFGCR + TQRA
Sbjct: 17  SGSGKILRLRLENFMCHSNLEIEFGEWVNFITGQNGSGKSAILTALCVAFGCRAKGTQRA 76


>gb|EMT14242.1| Structural maintenance of chromosomes protein 6 [Aegilops tauschii]
          Length = 1210

 Score =  103 bits (258), Expect = 2e-20
 Identities = 47/58 (81%), Positives = 55/58 (94%)
 Frame = +2

Query: 242 AGTISRIRVENFMCHSNMEIEFGDYVNFITGQNGSGKSAILTALCVAFGCRPRSTQRA 415
           AGTISRIR+ENFMCHS++ IE G++VNFITGQNGSGKSAILTALC+AFGCR ++TQRA
Sbjct: 2   AGTISRIRLENFMCHSSLHIELGEHVNFITGQNGSGKSAILTALCIAFGCRAKNTQRA 59


>ref|XP_004514508.1| PREDICTED: structural maintenance of chromosomes protein 6-like
           [Cicer arietinum]
          Length = 1054

 Score =  103 bits (257), Expect = 2e-20
 Identities = 49/66 (74%), Positives = 56/66 (84%)
 Frame = +2

Query: 218 SRMSSSAAAGTISRIRVENFMCHSNMEIEFGDYVNFITGQNGSGKSAILTALCVAFGCRP 397
           SR+S S  AG I ++R+ENFMCHSN E EFG++VN ITGQNGSGKSAILTALCVAFGCR 
Sbjct: 10  SRVSPSLEAGIIKKLRLENFMCHSNHETEFGNHVNVITGQNGSGKSAILTALCVAFGCRA 69

Query: 398 RSTQRA 415
           + TQRA
Sbjct: 70  KGTQRA 75


>gb|AAD54769.1|AF120932_1 SMC-like protein [Arabidopsis thaliana]
           gi|5880616|gb|AAD54770.1|AF120933_1 SMC-like protein
           [Arabidopsis thaliana]
          Length = 1055

 Score =  103 bits (256), Expect = 3e-20
 Identities = 50/72 (69%), Positives = 60/72 (83%), Gaps = 5/72 (6%)
 Frame = +2

Query: 215 GSRMSSS-----AAAGTISRIRVENFMCHSNMEIEFGDYVNFITGQNGSGKSAILTALCV 379
           G+R S S     + +G+I RI+VENFMCHS ++IEFG++VNFITGQNGSGKSAILTALC+
Sbjct: 5   GARASDSFIKQRSGSGSILRIKVENFMCHSYLQIEFGEWVNFITGQNGSGKSAILTALCI 64

Query: 380 AFGCRPRSTQRA 415
           AFGCR R TQRA
Sbjct: 65  AFGCRARGTQRA 76