BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00003887
         (1284 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517816.1| tRNA-dihydrouridine synthase A, putative [Ri...   578   e-162
gb|EOX96665.1| FMN-linked oxidoreductases superfamily protein is...   577   e-162
ref|XP_006439095.1| hypothetical protein CICLE_v10031578mg [Citr...   575   e-161
ref|XP_006439094.1| hypothetical protein CICLE_v10031578mg [Citr...   575   e-161
gb|ESW03385.1| hypothetical protein PHAVU_011G009800g [Phaseolus...   573   e-161
gb|EOX96664.1| FMN-linked oxidoreductases superfamily protein is...   572   e-160
gb|AFK41814.1| unknown [Lotus japonicus]                              567   e-159
ref|XP_003531118.1| PREDICTED: uncharacterized tRNA-dihydrouridi...   567   e-159
ref|XP_004506326.1| PREDICTED: tRNA-dihydrouridine synthase A-li...   563   e-158
ref|XP_002298425.2| hypothetical protein POPTR_0001s27210g [Popu...   561   e-157
ref|XP_002876726.1| hypothetical protein ARALYDRAFT_486864 [Arab...   561   e-157
gb|EXB32766.1| tRNA-dihydrouridine synthase A [Morus notabilis]       560   e-157
ref|XP_003633563.1| PREDICTED: tRNA-dihydrouridine synthase A-li...   559   e-157
emb|CBI24913.3| unnamed protein product [Vitis vinifera]              559   e-157
ref|XP_002277955.1| PREDICTED: tRNA-dihydrouridine synthase A-li...   559   e-157
ref|NP_567149.2| FMN-linked oxidoreductases superfamily protein ...   558   e-156
ref|XP_004306547.1| PREDICTED: tRNA-dihydrouridine synthase A-li...   557   e-156
ref|XP_004306546.1| PREDICTED: tRNA-dihydrouridine synthase A-li...   557   e-156
gb|EMJ19329.1| hypothetical protein PRUPE_ppa007116mg [Prunus pe...   556   e-156
gb|AAM61213.1| unknown [Arabidopsis thaliana]                         556   e-156

>ref|XP_002517816.1| tRNA-dihydrouridine synthase A, putative [Ricinus communis]
            gi|223543088|gb|EEF44623.1| tRNA-dihydrouridine synthase
            A, putative [Ricinus communis]
          Length = 375

 Score =  578 bits (1489), Expect = e-162
 Identities = 268/358 (74%), Positives = 314/358 (87%)
 Frame = +1

Query: 1    WTDNHYRTLARLISKHAWLYTEMVVAETVVYQEGNLDRFLGFSQEQHPIVLQLGGSNLGK 180
            WTD+HYRTLARLISKH+WLYTEM+ AET+VYQ+GNLDRFL FS +QHPIVLQ+GGSNL  
Sbjct: 19   WTDHHYRTLARLISKHSWLYTEMLAAETIVYQQGNLDRFLAFSPQQHPIVLQIGGSNLDN 78

Query: 181  LAKATQLANAYGYDEINFNCGCPSPKVAGHGCFGASLMLDPKFVGEAMSAIGANTDAPVT 360
            LAKAT+LA AYGYDEINFNCGCPSP+VAGHGCFG  LMLDPKFVGEAMS I ANTD PV+
Sbjct: 79   LAKATELATAYGYDEINFNCGCPSPRVAGHGCFGVRLMLDPKFVGEAMSVIAANTDVPVS 138

Query: 361  VKCRIGVDDHDSYNELCEFIYKVSSTSPTKHFILHSRKAILEGLSPAQNRKIPPLKYEYY 540
            VKCRIGVD+HDSYNELC+FIYKVSS SPTKHFI+HSRKA+L G+SPA+NRKIPPLKYEYY
Sbjct: 139  VKCRIGVDNHDSYNELCDFIYKVSSLSPTKHFIIHSRKALLNGISPAENRKIPPLKYEYY 198

Query: 541  FGLLRDFPELMFTINGGINSIEEVSTARKAGAHGVMVGRAAYNNPWQMLRNVDTVVYGAR 720
            F LLRDFP+L FTINGGIN I+EV+ A + GAHGVMVGRAA+NNPW +L +VD+ +YGA 
Sbjct: 199  FALLRDFPDLRFTINGGINCIDEVNLALREGAHGVMVGRAAFNNPWTVLGHVDSAIYGAP 258

Query: 721  TNNITRREVLEAYQVYGDSVLGKHGNNKPNVRDVVKPLLNLFHSESGNALWKRKADAAFK 900
             + +TRR+VLE YQ Y D++LG +GNN+PNVRDVVKPLL LF+SE GN LWKR+ADAAF+
Sbjct: 259  ESGLTRRQVLEQYQAYADAILGTYGNNRPNVRDVVKPLLGLFYSEPGNGLWKRRADAAFQ 318

Query: 901  NCTTVESFFEETLDAIPDSVLDSPFSKMPPTREDLFANVHNLIPPPYEAPRKPELLYA 1074
            +CTT++SFFEETL AIPD+VLDSP ++ P  R+DLF NV  L+PPPY A R+ ++ YA
Sbjct: 319  SCTTIKSFFEETLVAIPDTVLDSPIAEAPSGRQDLFTNVRGLLPPPY-ATREQDVAYA 375


>gb|EOX96665.1| FMN-linked oxidoreductases superfamily protein isoform 2 [Theobroma
            cacao] gi|508704770|gb|EOX96666.1| FMN-linked
            oxidoreductases superfamily protein isoform 2 [Theobroma
            cacao]
          Length = 375

 Score =  577 bits (1488), Expect = e-162
 Identities = 270/358 (75%), Positives = 314/358 (87%)
 Frame = +1

Query: 1    WTDNHYRTLARLISKHAWLYTEMVVAETVVYQEGNLDRFLGFSQEQHPIVLQLGGSNLGK 180
            WTDNHYRTLARLISKHAWLYTEM+ AET+VYQ+GNLDRFL +S EQHPIVLQ+GG+NL  
Sbjct: 19   WTDNHYRTLARLISKHAWLYTEMLAAETIVYQKGNLDRFLAYSPEQHPIVLQIGGNNLEN 78

Query: 181  LAKATQLANAYGYDEINFNCGCPSPKVAGHGCFGASLMLDPKFVGEAMSAIGANTDAPVT 360
            LAKAT+LANAY YDEINFNCGCPSPKVAGHGCFG  LMLDPKFVGEAMS I ANT+ PV+
Sbjct: 79   LAKATELANAYHYDEINFNCGCPSPKVAGHGCFGVRLMLDPKFVGEAMSVIAANTNVPVS 138

Query: 361  VKCRIGVDDHDSYNELCEFIYKVSSTSPTKHFILHSRKAILEGLSPAQNRKIPPLKYEYY 540
            VKCRIGVDDHDSYNELC+FIYKVSS SPT+HFI+HSRKA+L G+SPA NR+IPPLKYEYY
Sbjct: 139  VKCRIGVDDHDSYNELCDFIYKVSSLSPTRHFIIHSRKALLNGISPADNRRIPPLKYEYY 198

Query: 541  FGLLRDFPELMFTINGGINSIEEVSTARKAGAHGVMVGRAAYNNPWQMLRNVDTVVYGAR 720
            + LLRDFP+L FTINGGINS+ EV+ A + GAHGVMVGRAAYN PWQ L +VDT +YG  
Sbjct: 199  YALLRDFPDLKFTINGGINSVVEVNAALREGAHGVMVGRAAYNYPWQTLGHVDTAIYGQP 258

Query: 721  TNNITRREVLEAYQVYGDSVLGKHGNNKPNVRDVVKPLLNLFHSESGNALWKRKADAAFK 900
            ++ +TRR++LE YQ YGDSVLG++G+N+PNVR+V KPLLNLF+SE GN+LWKRKAD+AF+
Sbjct: 259  SSGLTRRKILERYQEYGDSVLGRNGSNRPNVREVAKPLLNLFYSEPGNSLWKRKADSAFQ 318

Query: 901  NCTTVESFFEETLDAIPDSVLDSPFSKMPPTREDLFANVHNLIPPPYEAPRKPELLYA 1074
            +CTT++SFFEETL AIPDSVLDSP + +P   EDLFANV  L+PPPY   R+ E +YA
Sbjct: 319  HCTTMKSFFEETLVAIPDSVLDSPIAGVPSGHEDLFANVQGLLPPPYNV-REQEAVYA 375


>ref|XP_006439095.1| hypothetical protein CICLE_v10031578mg [Citrus clementina]
            gi|567893151|ref|XP_006439096.1| hypothetical protein
            CICLE_v10031578mg [Citrus clementina]
            gi|567893155|ref|XP_006439098.1| hypothetical protein
            CICLE_v10031578mg [Citrus clementina]
            gi|568858647|ref|XP_006482859.1| PREDICTED:
            tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like isoform
            X1 [Citrus sinensis] gi|568858649|ref|XP_006482860.1|
            PREDICTED: tRNA-dihydrouridine(47) synthase
            [NAD(P)(+)]-like isoform X2 [Citrus sinensis]
            gi|568858651|ref|XP_006482861.1| PREDICTED:
            tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like isoform
            X3 [Citrus sinensis] gi|557541291|gb|ESR52335.1|
            hypothetical protein CICLE_v10031578mg [Citrus
            clementina] gi|557541292|gb|ESR52336.1| hypothetical
            protein CICLE_v10031578mg [Citrus clementina]
            gi|557541294|gb|ESR52338.1| hypothetical protein
            CICLE_v10031578mg [Citrus clementina]
          Length = 436

 Score =  575 bits (1483), Expect = e-161
 Identities = 267/358 (74%), Positives = 315/358 (87%)
 Frame = +1

Query: 1    WTDNHYRTLARLISKHAWLYTEMVVAETVVYQEGNLDRFLGFSQEQHPIVLQLGGSNLGK 180
            WTDNHYRTLARLISKHAWLYTEM+ AET++YQ+GNLDRFL FS EQHPIVLQ+GGSNL  
Sbjct: 79   WTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSNLDN 138

Query: 181  LAKATQLANAYGYDEINFNCGCPSPKVAGHGCFGASLMLDPKFVGEAMSAIGANTDAPVT 360
            LAKAT+LANAY YDEIN NCGCPSPKVAGHGCFG SLMLDPKFVGEAMS I ANT+ PV+
Sbjct: 139  LAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVS 198

Query: 361  VKCRIGVDDHDSYNELCEFIYKVSSTSPTKHFILHSRKAILEGLSPAQNRKIPPLKYEYY 540
            VKCRIGVDDHDSYN+LC+FIYKVSS SPT+HFI+HSRKA+L G+SPA+NR IPPLKYEYY
Sbjct: 199  VKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYY 258

Query: 541  FGLLRDFPELMFTINGGINSIEEVSTARKAGAHGVMVGRAAYNNPWQMLRNVDTVVYGAR 720
            + LLRDFP+L FT+NGGIN+++EV+ A + GAH VMVGRAAY NPW  L +VDT +YGA 
Sbjct: 259  YALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYGAP 318

Query: 721  TNNITRREVLEAYQVYGDSVLGKHGNNKPNVRDVVKPLLNLFHSESGNALWKRKADAAFK 900
            ++ +TRR+V+E YQVYGD++LG +GNN+P+VRDV+KPLL+ FHSE GN L+KRKADAAF+
Sbjct: 319  SSGLTRRQVVEKYQVYGDAILGTYGNNRPHVRDVMKPLLHFFHSEPGNGLFKRKADAAFQ 378

Query: 901  NCTTVESFFEETLDAIPDSVLDSPFSKMPPTREDLFANVHNLIPPPYEAPRKPELLYA 1074
             C TV+SF EET+ AIPDSVLDSP  + P  REDLFA+VH+L+PPPY+A R+ E+LYA
Sbjct: 379  TCKTVKSFLEETIVAIPDSVLDSPIEEAPRGREDLFADVHDLLPPPYKA-REQEVLYA 435


>ref|XP_006439094.1| hypothetical protein CICLE_v10031578mg [Citrus clementina]
            gi|568858653|ref|XP_006482862.1| PREDICTED:
            tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like isoform
            X4 [Citrus sinensis] gi|568858655|ref|XP_006482863.1|
            PREDICTED: tRNA-dihydrouridine(47) synthase
            [NAD(P)(+)]-like isoform X5 [Citrus sinensis]
            gi|557541290|gb|ESR52334.1| hypothetical protein
            CICLE_v10031578mg [Citrus clementina]
          Length = 376

 Score =  575 bits (1483), Expect = e-161
 Identities = 267/358 (74%), Positives = 315/358 (87%)
 Frame = +1

Query: 1    WTDNHYRTLARLISKHAWLYTEMVVAETVVYQEGNLDRFLGFSQEQHPIVLQLGGSNLGK 180
            WTDNHYRTLARLISKHAWLYTEM+ AET++YQ+GNLDRFL FS EQHPIVLQ+GGSNL  
Sbjct: 19   WTDNHYRTLARLISKHAWLYTEMLAAETIIYQQGNLDRFLAFSPEQHPIVLQIGGSNLDN 78

Query: 181  LAKATQLANAYGYDEINFNCGCPSPKVAGHGCFGASLMLDPKFVGEAMSAIGANTDAPVT 360
            LAKAT+LANAY YDEIN NCGCPSPKVAGHGCFG SLMLDPKFVGEAMS I ANT+ PV+
Sbjct: 79   LAKATELANAYNYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVGEAMSVIAANTNVPVS 138

Query: 361  VKCRIGVDDHDSYNELCEFIYKVSSTSPTKHFILHSRKAILEGLSPAQNRKIPPLKYEYY 540
            VKCRIGVDDHDSYN+LC+FIYKVSS SPT+HFI+HSRKA+L G+SPA+NR IPPLKYEYY
Sbjct: 139  VKCRIGVDDHDSYNQLCDFIYKVSSLSPTRHFIIHSRKALLNGISPAENRTIPPLKYEYY 198

Query: 541  FGLLRDFPELMFTINGGINSIEEVSTARKAGAHGVMVGRAAYNNPWQMLRNVDTVVYGAR 720
            + LLRDFP+L FT+NGGIN+++EV+ A + GAH VMVGRAAY NPW  L +VDT +YGA 
Sbjct: 199  YALLRDFPDLTFTLNGGINTVDEVNAALRKGAHHVMVGRAAYQNPWYTLGHVDTAIYGAP 258

Query: 721  TNNITRREVLEAYQVYGDSVLGKHGNNKPNVRDVVKPLLNLFHSESGNALWKRKADAAFK 900
            ++ +TRR+V+E YQVYGD++LG +GNN+P+VRDV+KPLL+ FHSE GN L+KRKADAAF+
Sbjct: 259  SSGLTRRQVVEKYQVYGDAILGTYGNNRPHVRDVMKPLLHFFHSEPGNGLFKRKADAAFQ 318

Query: 901  NCTTVESFFEETLDAIPDSVLDSPFSKMPPTREDLFANVHNLIPPPYEAPRKPELLYA 1074
             C TV+SF EET+ AIPDSVLDSP  + P  REDLFA+VH+L+PPPY+A R+ E+LYA
Sbjct: 319  TCKTVKSFLEETIVAIPDSVLDSPIEEAPRGREDLFADVHDLLPPPYKA-REQEVLYA 375


>gb|ESW03385.1| hypothetical protein PHAVU_011G009800g [Phaseolus vulgaris]
          Length = 431

 Score =  573 bits (1477), Expect = e-161
 Identities = 265/347 (76%), Positives = 310/347 (89%)
 Frame = +1

Query: 1    WTDNHYRTLARLISKHAWLYTEMVVAETVVYQEGNLDRFLGFSQEQHPIVLQLGGSNLGK 180
            WTDNHYRTLARLISKHAWLYTEMV AET+V+Q+ NLDRFL +S +QHPIVLQ+GGSN+  
Sbjct: 75   WTDNHYRTLARLISKHAWLYTEMVAAETIVHQKDNLDRFLAYSPDQHPIVLQIGGSNIKN 134

Query: 181  LAKATQLANAYGYDEINFNCGCPSPKVAGHGCFGASLMLDPKFVGEAMSAIGANTDAPVT 360
            LAKAT+LANAY YDEIN NCGCPSPKVAGHGCFG SLML+PKFV EAMSAI A+T+ PV+
Sbjct: 135  LAKATELANAYCYDEINLNCGCPSPKVAGHGCFGVSLMLNPKFVAEAMSAIAASTNVPVS 194

Query: 361  VKCRIGVDDHDSYNELCEFIYKVSSTSPTKHFILHSRKAILEGLSPAQNRKIPPLKYEYY 540
            VKCRIGVDDHDSYNELC+FIY+VSS SPTKHFI+HSRKA+L G+SPA+NR IPPLKYEY+
Sbjct: 195  VKCRIGVDDHDSYNELCDFIYQVSSLSPTKHFIIHSRKALLNGISPAENRSIPPLKYEYF 254

Query: 541  FGLLRDFPELMFTINGGINSIEEVSTARKAGAHGVMVGRAAYNNPWQMLRNVDTVVYGAR 720
            +GLLRDFP+L FTINGGI S+EEV  +++AGAHGVMVGRAAYNNPW +L +VD+ +YG  
Sbjct: 255  YGLLRDFPDLTFTINGGITSVEEVIASQEAGAHGVMVGRAAYNNPWHILGHVDSAIYGTP 314

Query: 721  TNNITRREVLEAYQVYGDSVLGKHGNNKPNVRDVVKPLLNLFHSESGNALWKRKADAAFK 900
            ++ +TRR+VL+ Y  YG+SV+GK+G  +P +RD+VKPLLNLFHSE GN LWKRKADAAFK
Sbjct: 315  SSGLTRRQVLKRYLAYGESVMGKYG-RRPTMRDIVKPLLNLFHSEPGNGLWKRKADAAFK 373

Query: 901  NCTTVESFFEETLDAIPDSVLDSPFSKMPPTREDLFANVHNLIPPPY 1041
            NC+TVESFFEETL AIPDSVLDSP +K+PP R DLFAN+HNL+PPPY
Sbjct: 374  NCSTVESFFEETLVAIPDSVLDSPVTKLPPGRRDLFANIHNLLPPPY 420


>gb|EOX96664.1| FMN-linked oxidoreductases superfamily protein isoform 1 [Theobroma
            cacao]
          Length = 436

 Score =  572 bits (1473), Expect = e-160
 Identities = 270/362 (74%), Positives = 314/362 (86%), Gaps = 4/362 (1%)
 Frame = +1

Query: 1    WTDNHYRTLARLISKHAWLYTEMVVAETVVYQEGNLDRFLGFSQEQHPIVLQLGGSNLGK 180
            WTDNHYRTLARLISKHAWLYTEM+ AET+VYQ+GNLDRFL +S EQHPIVLQ+GG+NL  
Sbjct: 76   WTDNHYRTLARLISKHAWLYTEMLAAETIVYQKGNLDRFLAYSPEQHPIVLQIGGNNLEN 135

Query: 181  LAKATQLANAYGYDEINFNCGCPSPKVAGHGCFGASLMLDPKFVGEAMSAIGANTDAPVT 360
            LAKAT+LANAY YDEINFNCGCPSPKVAGHGCFG  LMLDPKFVGEAMS I ANT+ PV+
Sbjct: 136  LAKATELANAYHYDEINFNCGCPSPKVAGHGCFGVRLMLDPKFVGEAMSVIAANTNVPVS 195

Query: 361  VKCRIGVDDHDSYNELCEFIYKVSSTSPTKHFILHSRKAILEGLSPAQNRKIPPLKYEYY 540
            VKCRIGVDDHDSYNELC+FIYKVSS SPT+HFI+HSRKA+L G+SPA NR+IPPLKYEYY
Sbjct: 196  VKCRIGVDDHDSYNELCDFIYKVSSLSPTRHFIIHSRKALLNGISPADNRRIPPLKYEYY 255

Query: 541  FGLLRDFPELMFTINGGINSIEEVSTARKAGAHGVMVGRAAYNNPWQMLRNVDTVVYGAR 720
            + LLRDFP+L FTINGGINS+ EV+ A + GAHGVMVGRAAYN PWQ L +VDT +YG  
Sbjct: 256  YALLRDFPDLKFTINGGINSVVEVNAALREGAHGVMVGRAAYNYPWQTLGHVDTAIYGQP 315

Query: 721  TNNITRREVLEAYQVYGDSVLGKHGNNKPNVRDVVK----PLLNLFHSESGNALWKRKAD 888
            ++ +TRR++LE YQ YGDSVLG++G+N+PNVR+V K    PLLNLF+SE GN+LWKRKAD
Sbjct: 316  SSGLTRRKILERYQEYGDSVLGRNGSNRPNVREVAKVGNFPLLNLFYSEPGNSLWKRKAD 375

Query: 889  AAFKNCTTVESFFEETLDAIPDSVLDSPFSKMPPTREDLFANVHNLIPPPYEAPRKPELL 1068
            +AF++CTT++SFFEETL AIPDSVLDSP + +P   EDLFANV  L+PPPY   R+ E +
Sbjct: 376  SAFQHCTTMKSFFEETLVAIPDSVLDSPIAGVPSGHEDLFANVQGLLPPPYNV-REQEAV 434

Query: 1069 YA 1074
            YA
Sbjct: 435  YA 436


>gb|AFK41814.1| unknown [Lotus japonicus]
          Length = 425

 Score =  567 bits (1462), Expect = e-159
 Identities = 268/358 (74%), Positives = 313/358 (87%)
 Frame = +1

Query: 1    WTDNHYRTLARLISKHAWLYTEMVVAETVVYQEGNLDRFLGFSQEQHPIVLQLGGSNLGK 180
            WTD+HYRTLARLISKHAWLYTEM+ AET+VYQ+ NLDRFL FS +QHPIVLQ+GGSN+ K
Sbjct: 69   WTDHHYRTLARLISKHAWLYTEMLAAETIVYQQDNLDRFLAFSPDQHPIVLQIGGSNVEK 128

Query: 181  LAKATQLANAYGYDEINFNCGCPSPKVAGHGCFGASLMLDPKFVGEAMSAIGANTDAPVT 360
            LAKAT+LANAYGYDEIN NCGCPSPKVAGHGCFG SLMLDPKFV EAMSAI ANT+ PV+
Sbjct: 129  LAKATELANAYGYDEINLNCGCPSPKVAGHGCFGVSLMLDPKFVAEAMSAITANTNVPVS 188

Query: 361  VKCRIGVDDHDSYNELCEFIYKVSSTSPTKHFILHSRKAILEGLSPAQNRKIPPLKYEYY 540
            VKCRIGVDDHDSY+ELC+FI+KVSS SPTKHFI+HSRKA+L G+SPA+NR IPPLKYEY+
Sbjct: 189  VKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSIPPLKYEYF 248

Query: 541  FGLLRDFPELMFTINGGINSIEEVSTARKAGAHGVMVGRAAYNNPWQMLRNVDTVVYGAR 720
            +GLLRDFP+L FTINGGI S++EV  AR+AGA+GV VGRAAYNNPW +L +VDTV+YGA 
Sbjct: 249  YGLLRDFPDLTFTINGGITSVDEVYAAREAGAYGVTVGRAAYNNPWHILGHVDTVIYGAP 308

Query: 721  TNNITRREVLEAYQVYGDSVLGKHGNNKPNVRDVVKPLLNLFHSESGNALWKRKADAAFK 900
            + ++TRR+VLE Y VYGDSVLGK+G  +P VRD+VKPLLNLFHS  GN LWKRKADAAF+
Sbjct: 309  SCSLTRRQVLEKYIVYGDSVLGKYG-RRPTVRDIVKPLLNLFHSAPGNGLWKRKADAAFR 367

Query: 901  NCTTVESFFEETLDAIPDSVLDSPFSKMPPTREDLFANVHNLIPPPYEAPRKPELLYA 1074
            +CTT++SFFEETL AIPDSVLDSP  +  P R DLFAN+ +L+PPPY    +  ++ A
Sbjct: 368  HCTTIKSFFEETLVAIPDSVLDSPVVEPTPGRRDLFANMDSLLPPPYTTREEAVIICA 425


>ref|XP_003531118.1| PREDICTED: uncharacterized tRNA-dihydrouridine synthase-like protein
            C45G9.2-like [Glycine max]
          Length = 430

 Score =  567 bits (1461), Expect = e-159
 Identities = 267/347 (76%), Positives = 311/347 (89%)
 Frame = +1

Query: 1    WTDNHYRTLARLISKHAWLYTEMVVAETVVYQEGNLDRFLGFSQEQHPIVLQLGGSNLGK 180
            WTD+HYRTLARLISKHAWLYTEM+ AET+V+Q+ NLDRFL +S +QHPIVLQ+GGSN+  
Sbjct: 75   WTDHHYRTLARLISKHAWLYTEMLAAETIVHQKDNLDRFLAYSPDQHPIVLQIGGSNIEN 134

Query: 181  LAKATQLANAYGYDEINFNCGCPSPKVAGHGCFGASLMLDPKFVGEAMSAIGANTDAPVT 360
            LAKAT+LANAY YDEIN NCGCPSPKVAGHGCFG SLML+PKFV EAMSAI A+T+ PV+
Sbjct: 135  LAKATELANAYCYDEINLNCGCPSPKVAGHGCFGVSLMLNPKFVAEAMSAIAASTNVPVS 194

Query: 361  VKCRIGVDDHDSYNELCEFIYKVSSTSPTKHFILHSRKAILEGLSPAQNRKIPPLKYEYY 540
            VKCRIGVDDHDSYNELC+FIY+VSS SPTKHFI+HSRKA+L G+SPA+NR IPPLKYEY+
Sbjct: 195  VKCRIGVDDHDSYNELCDFIYQVSSLSPTKHFIIHSRKALLNGISPAENRSIPPLKYEYF 254

Query: 541  FGLLRDFPELMFTINGGINSIEEVSTARKAGAHGVMVGRAAYNNPWQMLRNVDTVVYGAR 720
            +GLLRDFP+L FTINGGI S++EVS AR+AGAHGVMVGRAAYNNPWQ+L +VD  +YG  
Sbjct: 255  YGLLRDFPDLRFTINGGITSVDEVSAAREAGAHGVMVGRAAYNNPWQILGHVDAAIYGTP 314

Query: 721  TNNITRREVLEAYQVYGDSVLGKHGNNKPNVRDVVKPLLNLFHSESGNALWKRKADAAFK 900
            + ++TRR+VLE Y VYGDSVLGK+G ++P +RD+VKPLL+LFHSE GN LWKRKADAAFK
Sbjct: 315  SCDLTRRQVLERYLVYGDSVLGKYG-HRPTLRDIVKPLLHLFHSEPGNGLWKRKADAAFK 373

Query: 901  NCTTVESFFEETLDAIPDSVLDSPFSKMPPTREDLFANVHNLIPPPY 1041
            NCTT+ESFFEETL AIPDSVLDSP ++ PP R DLFAN+HNL+P PY
Sbjct: 374  NCTTMESFFEETLVAIPDSVLDSPVAEPPPGR-DLFANMHNLLPAPY 419


>ref|XP_004506326.1| PREDICTED: tRNA-dihydrouridine synthase A-like isoform X2 [Cicer
            arietinum]
          Length = 431

 Score =  563 bits (1450), Expect = e-158
 Identities = 263/348 (75%), Positives = 306/348 (87%)
 Frame = +1

Query: 1    WTDNHYRTLARLISKHAWLYTEMVVAETVVYQEGNLDRFLGFSQEQHPIVLQLGGSNLGK 180
            WTDNHYRTLARLISKHAWLYTEM+ AET+V+Q+ NLDRFL +S EQHPIVLQ+GG N+  
Sbjct: 76   WTDNHYRTLARLISKHAWLYTEMLAAETIVHQKDNLDRFLAYSPEQHPIVLQIGGGNVEN 135

Query: 181  LAKATQLANAYGYDEINFNCGCPSPKVAGHGCFGASLMLDPKFVGEAMSAIGANTDAPVT 360
            LAKAT+LANAY YDEIN NCGCPSP+VAGHGCFG  LMLDPKFV EAMSAI ANT+ PV+
Sbjct: 136  LAKATELANAYCYDEINLNCGCPSPRVAGHGCFGVRLMLDPKFVAEAMSAIAANTNVPVS 195

Query: 361  VKCRIGVDDHDSYNELCEFIYKVSSTSPTKHFILHSRKAILEGLSPAQNRKIPPLKYEYY 540
            VKCRIGVDDHDSY+ELC+FI+KVSS SPTKHFI+HSRKA+L G+SPA+NR IPPLKYEY+
Sbjct: 196  VKCRIGVDDHDSYDELCDFIFKVSSLSPTKHFIIHSRKALLNGISPAENRSIPPLKYEYF 255

Query: 541  FGLLRDFPELMFTINGGINSIEEVSTARKAGAHGVMVGRAAYNNPWQMLRNVDTVVYGAR 720
            +GLLRDFP+L FTINGGI SI+EV+ AR+AGAHGVM+GRAAYNNPW +L +VDT +YGA 
Sbjct: 256  YGLLRDFPDLTFTINGGIASIDEVNAAREAGAHGVMIGRAAYNNPWHILGHVDTAIYGAP 315

Query: 721  TNNITRREVLEAYQVYGDSVLGKHGNNKPNVRDVVKPLLNLFHSESGNALWKRKADAAFK 900
            +  +TRR+VLE Y VYGDS+LGK+G +KP VRD+VKPLLNLFHS  GN LWKR ADAAF+
Sbjct: 316  SCGLTRRQVLEKYIVYGDSMLGKYG-HKPTVRDIVKPLLNLFHSAPGNGLWKRNADAAFR 374

Query: 901  NCTTVESFFEETLDAIPDSVLDSPFSKMPPTREDLFANVHNLIPPPYE 1044
            NCTT++SFFEETL AIPDSVLDSP S+  P   DLFAN+ +L+PPPY+
Sbjct: 375  NCTTIKSFFEETLVAIPDSVLDSPISEPSPGSRDLFANIDSLLPPPYQ 422


>ref|XP_002298425.2| hypothetical protein POPTR_0001s27210g [Populus trichocarpa]
            gi|550348297|gb|EEE83230.2| hypothetical protein
            POPTR_0001s27210g [Populus trichocarpa]
          Length = 493

 Score =  561 bits (1446), Expect = e-157
 Identities = 261/360 (72%), Positives = 310/360 (86%), Gaps = 2/360 (0%)
 Frame = +1

Query: 1    WTDNHYRTLARLISKHAWLYTEMVVAETVVYQEGNLDRFLGFSQEQHPIVLQLGGSNLGK 180
            WTDNHYRT+AR+ISKHAWLYTEM+ AET+V+Q+G+LDRFL FS EQHPIVLQ+GG+NL  
Sbjct: 134  WTDNHYRTVARIISKHAWLYTEMLAAETIVHQQGDLDRFLAFSPEQHPIVLQIGGNNLDN 193

Query: 181  LAKATQLANAYGYDEINFNCGCPSPKVAGHGCFGASLMLDPKFVGEAMSAIGANTDAPVT 360
            +AKAT+LAN+YGYDEIN NCGCPSPKVAGHGCFG  LMLDPKFVGEAMS I ANTD PV+
Sbjct: 194  IAKATRLANSYGYDEINLNCGCPSPKVAGHGCFGVRLMLDPKFVGEAMSVIAANTDVPVS 253

Query: 361  VKCRIGVDDHDSYNELCEFIYKVSSTSPTKHFILHSRKAILEGLSPAQNRKIPPLKYEYY 540
            VKCRIG+DDHDSYNELC+FIYKVSS SPTKHFI+HSRKA+L G+SPA NR+IPPLKYEYY
Sbjct: 254  VKCRIGLDDHDSYNELCDFIYKVSSLSPTKHFIIHSRKALLNGISPADNRRIPPLKYEYY 313

Query: 541  FGLLRDFPELMFTINGGINSIEEVSTARKAGAHGVMVGRAAYNNPWQMLRNVDTVVYGAR 720
            + LLRDFP+L FTINGGIN ++EV+ A + GAHGVMVGRAAYN  W  L +VDT +YGA 
Sbjct: 314  YALLRDFPDLRFTINGGINCVDEVNAALREGAHGVMVGRAAYNYLWNTLAHVDTAIYGAP 373

Query: 721  TNNITRREVLEAYQVYGDSVLGKHGNNKPNVRDVVKPLLNLFHSESGNALWKRKADAAF- 897
            ++ +TRR+VLE YQVYGD+VLG +GN++PN+RD++KPL   F+SE GN LWKRKADAAF 
Sbjct: 374  SSGLTRRQVLEQYQVYGDAVLGTYGNSRPNIRDLIKPLFGFFYSEPGNNLWKRKADAAFQ 433

Query: 898  -KNCTTVESFFEETLDAIPDSVLDSPFSKMPPTREDLFANVHNLIPPPYEAPRKPELLYA 1074
             KN TTV+SFFEETL AIPD+VLDS  +++P  R+DLFANV  L+PPPYE   +  ++YA
Sbjct: 434  MKNITTVKSFFEETLVAIPDAVLDSHAAELPSGRKDLFANVRGLLPPPYETREQEVVVYA 493


>ref|XP_002876726.1| hypothetical protein ARALYDRAFT_486864 [Arabidopsis lyrata subsp.
            lyrata] gi|297322564|gb|EFH52985.1| hypothetical protein
            ARALYDRAFT_486864 [Arabidopsis lyrata subsp. lyrata]
          Length = 405

 Score =  561 bits (1445), Expect = e-157
 Identities = 264/359 (73%), Positives = 308/359 (85%), Gaps = 1/359 (0%)
 Frame = +1

Query: 1    WTDNHYRTLARLISKHAWLYTEMVVAETVVYQEGNLDRFLGFSQEQHPIVLQLGGSNLGK 180
            WTDNHYRTLARLI+KHAWLYTEM+ AET+V+Q+ NLDRFL FS +QHPIVLQLGGSN+  
Sbjct: 47   WTDNHYRTLARLITKHAWLYTEMIAAETLVHQQANLDRFLAFSPQQHPIVLQLGGSNVEN 106

Query: 181  LAKATQLANAYGYDEINFNCGCPSPKVAGHGCFGASLMLDPKFVGEAMSAIGANTDAPVT 360
            LAKA +L++AYGYDEIN NCGCPSPKVAGHGCFG  LML PK VGEAMSAI ANT+ PVT
Sbjct: 107  LAKAAKLSDAYGYDEINLNCGCPSPKVAGHGCFGVRLMLKPKLVGEAMSAIAANTNVPVT 166

Query: 361  VKCRIGVDDHDSYNELCEFIYKVSSTSPTKHFILHSRKAILEGLSPAQNRKIPPLKYEYY 540
            VKCRIGVDDHDSY+ELC+FIYKVS+ SPT+HFI+HSRKA+L G+SPA NR+IPPLKYEY+
Sbjct: 167  VKCRIGVDDHDSYDELCDFIYKVSTLSPTRHFIVHSRKALLGGISPADNRRIPPLKYEYF 226

Query: 541  FGLLRDFPELMFTINGGINSIEEVSTARKAGAHGVMVGRAAYNNPWQMLRNVDTVVYGAR 720
            + L+RDFP+L FTINGGI S+ +V+ A K GAHGVMVGRAAYNNPWQML +VDT VYG  
Sbjct: 227  YALVRDFPDLRFTINGGITSVSKVNAALKEGAHGVMVGRAAYNNPWQMLGHVDTAVYGVP 286

Query: 721  TNNITRREVLEAYQVYGDSVLGKHGNNKPNVRDVVKPLLNLFHSESGNALWKRKADAAFK 900
            +  +TRR+VLE YQVYGDSVLG HGN +PNVRD+VKPLLNLFHSE+GN+LWKR+ADAAFK
Sbjct: 287  SRGLTRRQVLEQYQVYGDSVLGTHGNGRPNVRDLVKPLLNLFHSENGNSLWKRRADAAFK 346

Query: 901  NCTTVESFFEETLDAIPDSVLDSPFSKMPPT-REDLFANVHNLIPPPYEAPRKPELLYA 1074
             C +V S  EE+L AIPD VLDSP S  P +  ED+FA+VHN++PPPYEA  +  +L A
Sbjct: 347  ECRSVGSLLEESLRAIPDCVLDSPISGSPESGEEDVFADVHNVLPPPYEAAGEGIILCA 405


>gb|EXB32766.1| tRNA-dihydrouridine synthase A [Morus notabilis]
          Length = 457

 Score =  560 bits (1444), Expect = e-157
 Identities = 272/384 (70%), Positives = 316/384 (82%), Gaps = 26/384 (6%)
 Frame = +1

Query: 1    WTDNHYRTLARLISKHAWLYTEMVVAETVVYQEGNL------------------------ 108
            WTD+HYRTLARLISKHAWLYTEM+ AET+VYQ+ NL                        
Sbjct: 76   WTDHHYRTLARLISKHAWLYTEMLAAETIVYQQHNLHLSMRVFDRSVWKTTRVEKFVYNA 135

Query: 109  -DRFLGFSQEQHPIVLQLGGSNLGKLAKATQLANAYGYDEINFNCGCPSPKVAGHGCFGA 285
             DRFL FS EQHPI+LQ+GG+NL  +AKAT+LAN YGYDEINFNCGCPSPKVAGHGCFG 
Sbjct: 136  QDRFLAFSPEQHPIILQIGGNNLDNIAKATELANPYGYDEINFNCGCPSPKVAGHGCFGV 195

Query: 286  SLMLDPKFVGEAMSAIGANTDAPVTVKCRIGVDDHDSYNELCEFIYKVSSTSPTKHFILH 465
             LMLDPKFV +AMS I ANTDAPV+VKCRIGVDDHDSYNELC+FIYKVSS SPT+HFI+H
Sbjct: 196  RLMLDPKFVAKAMSVIAANTDAPVSVKCRIGVDDHDSYNELCDFIYKVSSLSPTRHFIIH 255

Query: 466  SRKAILEGLSPAQNRKIPPLKYEYYFGLLRDFPELMFTINGGINSIEEVSTARKAGAHGV 645
            SRKA+L G+SPA+NR IPPLKYEY++GLLRDFP+L FTINGGIN+++EV+ ARKAGAHGV
Sbjct: 256  SRKALLNGISPAENRTIPPLKYEYFYGLLRDFPDLRFTINGGINTVDEVNAARKAGAHGV 315

Query: 646  MVGRAAYNNPWQMLRNVDTVVYGARTNNITRREVLEAYQVYGDSVLGKHGNNKPNVRDVV 825
            M+GR AY NPWQ+L  VDT +YGA ++ ITRR+VLE YQ+YGDSVL + G  KPNVRDVV
Sbjct: 316  MIGRTAYYNPWQLLGRVDTAIYGAPSSGITRRQVLEKYQIYGDSVLWRDG-CKPNVRDVV 374

Query: 826  KPLLNLFHSESGNALWKRKADAAFKNCTTVESFFEETLDAIPDSVLDSPFS-KMPPTRED 1002
            KPLL+LFHSE GN LWKRKADAAF++C +++SFFEETL AIPDSVLDSP +  +PP RED
Sbjct: 375  KPLLHLFHSEPGNGLWKRKADAAFQHCMSIKSFFEETLVAIPDSVLDSPIAGPLPPGRED 434

Query: 1003 LFANVHNLIPPPYEAPRKPELLYA 1074
            LFANV +L+PPPY+   + ELL A
Sbjct: 435  LFANVESLLPPPYDQSEQ-ELLCA 457


>ref|XP_003633563.1| PREDICTED: tRNA-dihydrouridine synthase A-like isoform 2 [Vitis
            vinifera]
          Length = 377

 Score =  559 bits (1441), Expect = e-157
 Identities = 263/359 (73%), Positives = 312/359 (86%), Gaps = 1/359 (0%)
 Frame = +1

Query: 1    WTDNHYRTLARLISKHAWLYTEMVVAETVVYQEGNLDRFLGFSQEQHPIVLQLGGSNLGK 180
            WT+NHYRTLARLISKHAWLYTEM+ AET+VYQE NLDRFL FS +QHPIVLQ+GG+NL  
Sbjct: 19   WTNNHYRTLARLISKHAWLYTEMIAAETIVYQEKNLDRFLEFSPDQHPIVLQIGGNNLDN 78

Query: 181  LAKATQLANAYGYDEINFNCGCPSPKVAGHGCFGASLMLDPKFVGEAMSAIGANTDAPVT 360
            +AKAT+LAN+Y YDEIN NCGCPSPKVAGHGCFG  LMLDPKFV EAMS I AN+D PV+
Sbjct: 79   IAKATELANSYCYDEINLNCGCPSPKVAGHGCFGVRLMLDPKFVAEAMSVIAANSDVPVS 138

Query: 361  VKCRIGVDDHDSYNELCEFIYKVSSTSPTKHFILHSRKAILEGLSPAQNRKIPPLKYEYY 540
            VKCRIGVDDHDSYNELC+FIYKVSS SPT+HFI+HSRKA+L G+SPA NRKIPPLKYEYY
Sbjct: 139  VKCRIGVDDHDSYNELCDFIYKVSSQSPTRHFIIHSRKALLNGISPADNRKIPPLKYEYY 198

Query: 541  FGLLRDFPELMFTINGGINSIEEVSTARKAGAHGVMVGRAAYNNPWQMLRNVDTVVYGAR 720
            FGLLRDFP+L FTINGGIN ++EV+ A + GAHGVMVGRAAY+NPW  L +VD+ VYGA 
Sbjct: 199  FGLLRDFPDLRFTINGGINCVDEVNAALRQGAHGVMVGRAAYHNPWYTLGHVDSAVYGAP 258

Query: 721  TNNITRREVLEAYQVYGDSVLGKHGNNKPNVRDVVKPLLNLFHSESGNALWKRKADAAFK 900
             ++++RR+VLE YQVYGDSVL K+G ++P++R+VVKPLL+ F+SE GN LWKRKADAAF 
Sbjct: 259  VSDLSRRQVLEQYQVYGDSVLEKYGPHRPSIREVVKPLLHFFYSEPGNGLWKRKADAAFF 318

Query: 901  NCTTVESFFEETLDAIPDSVLDSPFSKMPPTREDLFANVHNLIPPPYE-APRKPELLYA 1074
            +C T++SF EETL AIPDSVLD+P +K P  REDLFAN+ +L+P PYE + ++ E+LYA
Sbjct: 319  HCKTIKSFLEETLVAIPDSVLDAPVAKAPSGREDLFANLSDLLPLPYETSEQEQEVLYA 377


>emb|CBI24913.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score =  559 bits (1441), Expect = e-157
 Identities = 263/359 (73%), Positives = 312/359 (86%), Gaps = 1/359 (0%)
 Frame = +1

Query: 1    WTDNHYRTLARLISKHAWLYTEMVVAETVVYQEGNLDRFLGFSQEQHPIVLQLGGSNLGK 180
            WT+NHYRTLARLISKHAWLYTEM+ AET+VYQE NLDRFL FS +QHPIVLQ+GG+NL  
Sbjct: 65   WTNNHYRTLARLISKHAWLYTEMIAAETIVYQEKNLDRFLEFSPDQHPIVLQIGGNNLDN 124

Query: 181  LAKATQLANAYGYDEINFNCGCPSPKVAGHGCFGASLMLDPKFVGEAMSAIGANTDAPVT 360
            +AKAT+LAN+Y YDEIN NCGCPSPKVAGHGCFG  LMLDPKFV EAMS I AN+D PV+
Sbjct: 125  IAKATELANSYCYDEINLNCGCPSPKVAGHGCFGVRLMLDPKFVAEAMSVIAANSDVPVS 184

Query: 361  VKCRIGVDDHDSYNELCEFIYKVSSTSPTKHFILHSRKAILEGLSPAQNRKIPPLKYEYY 540
            VKCRIGVDDHDSYNELC+FIYKVSS SPT+HFI+HSRKA+L G+SPA NRKIPPLKYEYY
Sbjct: 185  VKCRIGVDDHDSYNELCDFIYKVSSQSPTRHFIIHSRKALLNGISPADNRKIPPLKYEYY 244

Query: 541  FGLLRDFPELMFTINGGINSIEEVSTARKAGAHGVMVGRAAYNNPWQMLRNVDTVVYGAR 720
            FGLLRDFP+L FTINGGIN ++EV+ A + GAHGVMVGRAAY+NPW  L +VD+ VYGA 
Sbjct: 245  FGLLRDFPDLRFTINGGINCVDEVNAALRQGAHGVMVGRAAYHNPWYTLGHVDSAVYGAP 304

Query: 721  TNNITRREVLEAYQVYGDSVLGKHGNNKPNVRDVVKPLLNLFHSESGNALWKRKADAAFK 900
             ++++RR+VLE YQVYGDSVL K+G ++P++R+VVKPLL+ F+SE GN LWKRKADAAF 
Sbjct: 305  VSDLSRRQVLEQYQVYGDSVLEKYGPHRPSIREVVKPLLHFFYSEPGNGLWKRKADAAFF 364

Query: 901  NCTTVESFFEETLDAIPDSVLDSPFSKMPPTREDLFANVHNLIPPPYE-APRKPELLYA 1074
            +C T++SF EETL AIPDSVLD+P +K P  REDLFAN+ +L+P PYE + ++ E+LYA
Sbjct: 365  HCKTIKSFLEETLVAIPDSVLDAPVAKAPSGREDLFANLSDLLPLPYETSEQEQEVLYA 423


>ref|XP_002277955.1| PREDICTED: tRNA-dihydrouridine synthase A-like isoform 1 [Vitis
            vinifera]
          Length = 433

 Score =  559 bits (1441), Expect = e-157
 Identities = 263/359 (73%), Positives = 312/359 (86%), Gaps = 1/359 (0%)
 Frame = +1

Query: 1    WTDNHYRTLARLISKHAWLYTEMVVAETVVYQEGNLDRFLGFSQEQHPIVLQLGGSNLGK 180
            WT+NHYRTLARLISKHAWLYTEM+ AET+VYQE NLDRFL FS +QHPIVLQ+GG+NL  
Sbjct: 75   WTNNHYRTLARLISKHAWLYTEMIAAETIVYQEKNLDRFLEFSPDQHPIVLQIGGNNLDN 134

Query: 181  LAKATQLANAYGYDEINFNCGCPSPKVAGHGCFGASLMLDPKFVGEAMSAIGANTDAPVT 360
            +AKAT+LAN+Y YDEIN NCGCPSPKVAGHGCFG  LMLDPKFV EAMS I AN+D PV+
Sbjct: 135  IAKATELANSYCYDEINLNCGCPSPKVAGHGCFGVRLMLDPKFVAEAMSVIAANSDVPVS 194

Query: 361  VKCRIGVDDHDSYNELCEFIYKVSSTSPTKHFILHSRKAILEGLSPAQNRKIPPLKYEYY 540
            VKCRIGVDDHDSYNELC+FIYKVSS SPT+HFI+HSRKA+L G+SPA NRKIPPLKYEYY
Sbjct: 195  VKCRIGVDDHDSYNELCDFIYKVSSQSPTRHFIIHSRKALLNGISPADNRKIPPLKYEYY 254

Query: 541  FGLLRDFPELMFTINGGINSIEEVSTARKAGAHGVMVGRAAYNNPWQMLRNVDTVVYGAR 720
            FGLLRDFP+L FTINGGIN ++EV+ A + GAHGVMVGRAAY+NPW  L +VD+ VYGA 
Sbjct: 255  FGLLRDFPDLRFTINGGINCVDEVNAALRQGAHGVMVGRAAYHNPWYTLGHVDSAVYGAP 314

Query: 721  TNNITRREVLEAYQVYGDSVLGKHGNNKPNVRDVVKPLLNLFHSESGNALWKRKADAAFK 900
             ++++RR+VLE YQVYGDSVL K+G ++P++R+VVKPLL+ F+SE GN LWKRKADAAF 
Sbjct: 315  VSDLSRRQVLEQYQVYGDSVLEKYGPHRPSIREVVKPLLHFFYSEPGNGLWKRKADAAFF 374

Query: 901  NCTTVESFFEETLDAIPDSVLDSPFSKMPPTREDLFANVHNLIPPPYE-APRKPELLYA 1074
            +C T++SF EETL AIPDSVLD+P +K P  REDLFAN+ +L+P PYE + ++ E+LYA
Sbjct: 375  HCKTIKSFLEETLVAIPDSVLDAPVAKAPSGREDLFANLSDLLPLPYETSEQEQEVLYA 433


>ref|NP_567149.2| FMN-linked oxidoreductases superfamily protein [Arabidopsis thaliana]
            gi|24030197|gb|AAN41279.1| unknown protein [Arabidopsis
            thaliana] gi|332646975|gb|AEE80496.1| tRNA dihydrouridine
            synthase [Arabidopsis thaliana]
          Length = 419

 Score =  558 bits (1438), Expect = e-156
 Identities = 262/350 (74%), Positives = 304/350 (86%), Gaps = 1/350 (0%)
 Frame = +1

Query: 1    WTDNHYRTLARLISKHAWLYTEMVVAETVVYQEGNLDRFLGFSQEQHPIVLQLGGSNLGK 180
            WTDNHYRTLARLI+KHAWLYTEM+ AET+V+Q+ NLDRFL FS +QHPIVLQLGGSN+  
Sbjct: 62   WTDNHYRTLARLITKHAWLYTEMIAAETLVHQQTNLDRFLAFSPQQHPIVLQLGGSNVEN 121

Query: 181  LAKATQLANAYGYDEINFNCGCPSPKVAGHGCFGASLMLDPKFVGEAMSAIGANTDAPVT 360
            LAKA +L++AYGYDEIN NCGCPSPKVAGHGCFG SLML PK VGEAMSAI ANT+ PVT
Sbjct: 122  LAKAAKLSDAYGYDEINLNCGCPSPKVAGHGCFGVSLMLKPKLVGEAMSAIAANTNVPVT 181

Query: 361  VKCRIGVDDHDSYNELCEFIYKVSSTSPTKHFILHSRKAILEGLSPAQNRKIPPLKYEYY 540
            VKCRIGVD+HDSY+ELC+FIYKVS+ SPT+HFI+HSRKA+L G+SPA NR+IPPLKYEYY
Sbjct: 182  VKCRIGVDNHDSYDELCDFIYKVSTLSPTRHFIVHSRKALLGGISPADNRRIPPLKYEYY 241

Query: 541  FGLLRDFPELMFTINGGINSIEEVSTARKAGAHGVMVGRAAYNNPWQMLRNVDTVVYGAR 720
            + L+RDFP+L FTINGGI S+ +V+ A K GAHGVMVGRAAYNNPWQ L  VDT VYG  
Sbjct: 242  YALVRDFPDLRFTINGGITSVSKVNAALKEGAHGVMVGRAAYNNPWQTLGQVDTAVYGVP 301

Query: 721  TNNITRREVLEAYQVYGDSVLGKHGNNKPNVRDVVKPLLNLFHSESGNALWKRKADAAFK 900
            ++ +TRR+VLE YQVYGDSVLG HGN +PNVRD+VKPLLNLFHSE+GN+LWKR+ADAAFK
Sbjct: 302  SSGLTRRQVLEQYQVYGDSVLGTHGNGRPNVRDLVKPLLNLFHSENGNSLWKRRADAAFK 361

Query: 901  NCTTVESFFEETLDAIPDSVLDSPFSKMPPT-REDLFANVHNLIPPPYEA 1047
             C +V S  EE+L AIPD VLDSP S  P +  ED+FA+VHN++PPPYEA
Sbjct: 362  ECRSVGSLLEESLRAIPDCVLDSPISGSPESGDEDVFADVHNVLPPPYEA 411


>ref|XP_004306547.1| PREDICTED: tRNA-dihydrouridine synthase A-like isoform 2 [Fragaria
            vesca subsp. vesca]
          Length = 380

 Score =  557 bits (1436), Expect = e-156
 Identities = 264/358 (73%), Positives = 309/358 (86%)
 Frame = +1

Query: 1    WTDNHYRTLARLISKHAWLYTEMVVAETVVYQEGNLDRFLGFSQEQHPIVLQLGGSNLGK 180
            WTD HYRT+ARLISKHAWLYTEM+ AET+VYQ+ NLDRFL F  EQHPIVLQ+GGSNL  
Sbjct: 25   WTDVHYRTMARLISKHAWLYTEMLAAETIVYQKDNLDRFLYFPPEQHPIVLQIGGSNLEN 84

Query: 181  LAKATQLANAYGYDEINFNCGCPSPKVAGHGCFGASLMLDPKFVGEAMSAIGANTDAPVT 360
            LAKATQLAN Y YDEINFNCGCPSP+VAGHGCFGA LMLDPKFV EAMS I ANTD PV+
Sbjct: 85   LAKATQLANIYKYDEINFNCGCPSPRVAGHGCFGARLMLDPKFVAEAMSVIAANTDVPVS 144

Query: 361  VKCRIGVDDHDSYNELCEFIYKVSSTSPTKHFILHSRKAILEGLSPAQNRKIPPLKYEYY 540
            VKCRIGVDDHDSYNELC+FIYKVSS SPT+HFI+HSRKA+L G+SPA+NR IPPLKYEY+
Sbjct: 145  VKCRIGVDDHDSYNELCDFIYKVSSQSPTRHFIIHSRKALLNGISPAENRSIPPLKYEYF 204

Query: 541  FGLLRDFPELMFTINGGINSIEEVSTARKAGAHGVMVGRAAYNNPWQMLRNVDTVVYGAR 720
            +GLLRDFP+L FTINGGIN+I+EVS ARKAGAHGVMVGRAA+NNPW  L +VDT +YGA 
Sbjct: 205  YGLLRDFPDLRFTINGGINTIDEVSAARKAGAHGVMVGRAAFNNPWNTLGHVDTAIYGAP 264

Query: 721  TNNITRREVLEAYQVYGDSVLGKHGNNKPNVRDVVKPLLNLFHSESGNALWKRKADAAFK 900
            ++ +TRR++L+ ++ YG++VLGK+G  KPNVRDV KPLL+LF+++ GN+LWKRKADAAF 
Sbjct: 265  SSGVTRRQILKEFEAYGETVLGKYG-LKPNVRDVAKPLLSLFYAQPGNSLWKRKADAAFM 323

Query: 901  NCTTVESFFEETLDAIPDSVLDSPFSKMPPTREDLFANVHNLIPPPYEAPRKPELLYA 1074
            +C T++SFFEETL AIPD VLD+P    P   +D FAN+H L+PPPYE  R+ EL YA
Sbjct: 324  HCKTMKSFFEETLVAIPDFVLDAPVRAPPLGSKDPFANIHTLLPPPYEL-REQELQYA 380


>ref|XP_004306546.1| PREDICTED: tRNA-dihydrouridine synthase A-like isoform 1 [Fragaria
            vesca subsp. vesca]
          Length = 424

 Score =  557 bits (1436), Expect = e-156
 Identities = 264/358 (73%), Positives = 309/358 (86%)
 Frame = +1

Query: 1    WTDNHYRTLARLISKHAWLYTEMVVAETVVYQEGNLDRFLGFSQEQHPIVLQLGGSNLGK 180
            WTD HYRT+ARLISKHAWLYTEM+ AET+VYQ+ NLDRFL F  EQHPIVLQ+GGSNL  
Sbjct: 69   WTDVHYRTMARLISKHAWLYTEMLAAETIVYQKDNLDRFLYFPPEQHPIVLQIGGSNLEN 128

Query: 181  LAKATQLANAYGYDEINFNCGCPSPKVAGHGCFGASLMLDPKFVGEAMSAIGANTDAPVT 360
            LAKATQLAN Y YDEINFNCGCPSP+VAGHGCFGA LMLDPKFV EAMS I ANTD PV+
Sbjct: 129  LAKATQLANIYKYDEINFNCGCPSPRVAGHGCFGARLMLDPKFVAEAMSVIAANTDVPVS 188

Query: 361  VKCRIGVDDHDSYNELCEFIYKVSSTSPTKHFILHSRKAILEGLSPAQNRKIPPLKYEYY 540
            VKCRIGVDDHDSYNELC+FIYKVSS SPT+HFI+HSRKA+L G+SPA+NR IPPLKYEY+
Sbjct: 189  VKCRIGVDDHDSYNELCDFIYKVSSQSPTRHFIIHSRKALLNGISPAENRSIPPLKYEYF 248

Query: 541  FGLLRDFPELMFTINGGINSIEEVSTARKAGAHGVMVGRAAYNNPWQMLRNVDTVVYGAR 720
            +GLLRDFP+L FTINGGIN+I+EVS ARKAGAHGVMVGRAA+NNPW  L +VDT +YGA 
Sbjct: 249  YGLLRDFPDLRFTINGGINTIDEVSAARKAGAHGVMVGRAAFNNPWNTLGHVDTAIYGAP 308

Query: 721  TNNITRREVLEAYQVYGDSVLGKHGNNKPNVRDVVKPLLNLFHSESGNALWKRKADAAFK 900
            ++ +TRR++L+ ++ YG++VLGK+G  KPNVRDV KPLL+LF+++ GN+LWKRKADAAF 
Sbjct: 309  SSGVTRRQILKEFEAYGETVLGKYG-LKPNVRDVAKPLLSLFYAQPGNSLWKRKADAAFM 367

Query: 901  NCTTVESFFEETLDAIPDSVLDSPFSKMPPTREDLFANVHNLIPPPYEAPRKPELLYA 1074
            +C T++SFFEETL AIPD VLD+P    P   +D FAN+H L+PPPYE  R+ EL YA
Sbjct: 368  HCKTMKSFFEETLVAIPDFVLDAPVRAPPLGSKDPFANIHTLLPPPYEL-REQELQYA 424


>gb|EMJ19329.1| hypothetical protein PRUPE_ppa007116mg [Prunus persica]
          Length = 381

 Score =  556 bits (1433), Expect = e-156
 Identities = 262/358 (73%), Positives = 308/358 (86%)
 Frame = +1

Query: 1    WTDNHYRTLARLISKHAWLYTEMVVAETVVYQEGNLDRFLGFSQEQHPIVLQLGGSNLGK 180
            WTDNHYRTLARLISK+AWLYTEM+ AET+VYQ+ NLDRFL +S EQHPIVLQ+GG+NL  
Sbjct: 26   WTDNHYRTLARLISKNAWLYTEMLAAETIVYQKDNLDRFLEYSPEQHPIVLQIGGNNLEN 85

Query: 181  LAKATQLANAYGYDEINFNCGCPSPKVAGHGCFGASLMLDPKFVGEAMSAIGANTDAPVT 360
            LAKAT+LA  Y YDEINFNCGCPSP+VAGHGCFGA LMLDPKFV EAMS I A+TDAPV+
Sbjct: 86   LAKATELAEPYKYDEINFNCGCPSPRVAGHGCFGARLMLDPKFVAEAMSVIAAHTDAPVS 145

Query: 361  VKCRIGVDDHDSYNELCEFIYKVSSTSPTKHFILHSRKAILEGLSPAQNRKIPPLKYEYY 540
            VKCRIGVDDHDSYNELC+FIYKVSS SPT+HFI+HSRKA+L G+SPA+NR IPPLKYEY+
Sbjct: 146  VKCRIGVDDHDSYNELCDFIYKVSSQSPTRHFIIHSRKALLNGISPAENRSIPPLKYEYF 205

Query: 541  FGLLRDFPELMFTINGGINSIEEVSTARKAGAHGVMVGRAAYNNPWQMLRNVDTVVYGAR 720
            +GLLRDFP+L FTINGGIN+++EV+ AR+AGAHGVMVGRAA+  PW  L +VDT +YGA 
Sbjct: 206  YGLLRDFPDLRFTINGGINTVDEVNAARRAGAHGVMVGRAAFQKPWHTLGHVDTAIYGAP 265

Query: 721  TNNITRREVLEAYQVYGDSVLGKHGNNKPNVRDVVKPLLNLFHSESGNALWKRKADAAFK 900
            ++ +TRR++LE +QVYGDS +GK+G  KP VRDV +PLL LFHSE GN +WKRKADAAF 
Sbjct: 266  SSGVTRRQILEKFQVYGDSAVGKYG-RKPTVRDVARPLLGLFHSEPGNGVWKRKADAAFL 324

Query: 901  NCTTVESFFEETLDAIPDSVLDSPFSKMPPTREDLFANVHNLIPPPYEAPRKPELLYA 1074
            +CTT++SFFEETL AIPD VLDSP  +     ED FAN+H L+PP YE+ R+ ELLYA
Sbjct: 325  HCTTMKSFFEETLVAIPDHVLDSPIGEPSSGGEDPFANIHTLLPPAYES-REQELLYA 381


>gb|AAM61213.1| unknown [Arabidopsis thaliana]
          Length = 404

 Score =  556 bits (1433), Expect = e-156
 Identities = 261/350 (74%), Positives = 304/350 (86%), Gaps = 1/350 (0%)
 Frame = +1

Query: 1    WTDNHYRTLARLISKHAWLYTEMVVAETVVYQEGNLDRFLGFSQEQHPIVLQLGGSNLGK 180
            WTDNHYRTLARLI+KHAWLYTEM+ AET+V+Q+ NLDRFL FS +QHPIVLQLGGSN+  
Sbjct: 47   WTDNHYRTLARLITKHAWLYTEMIAAETLVHQQTNLDRFLAFSPQQHPIVLQLGGSNVEN 106

Query: 181  LAKATQLANAYGYDEINFNCGCPSPKVAGHGCFGASLMLDPKFVGEAMSAIGANTDAPVT 360
            LAKA +L++AYGYDEIN NCGCPSPKVAGHGCFG SLML PK VGEAMSAI ANT+ PVT
Sbjct: 107  LAKAAKLSDAYGYDEINLNCGCPSPKVAGHGCFGVSLMLKPKLVGEAMSAIAANTNVPVT 166

Query: 361  VKCRIGVDDHDSYNELCEFIYKVSSTSPTKHFILHSRKAILEGLSPAQNRKIPPLKYEYY 540
            VKCRIGVD+HDSY+ELC+FIYKVS+ SPT+HFI+HSRKA+L G+SPA NR+IPPLKYEYY
Sbjct: 167  VKCRIGVDNHDSYDELCDFIYKVSTLSPTRHFIVHSRKALLGGISPADNRRIPPLKYEYY 226

Query: 541  FGLLRDFPELMFTINGGINSIEEVSTARKAGAHGVMVGRAAYNNPWQMLRNVDTVVYGAR 720
            + L+RDFP+L FTINGGI S+ +V+ A K GAHGVMVGRAAYNNPWQ L +VDT VYG  
Sbjct: 227  YALVRDFPDLRFTINGGITSVSKVNAALKEGAHGVMVGRAAYNNPWQTLGHVDTAVYGVP 286

Query: 721  TNNITRREVLEAYQVYGDSVLGKHGNNKPNVRDVVKPLLNLFHSESGNALWKRKADAAFK 900
            ++ +TRR+VLE YQVYGDSVLG HGN +PNVRD+VKPLLNLFHSE+ N+LWKR+ADAAFK
Sbjct: 287  SSGLTRRQVLEQYQVYGDSVLGTHGNGRPNVRDLVKPLLNLFHSENANSLWKRRADAAFK 346

Query: 901  NCTTVESFFEETLDAIPDSVLDSPFSKMPPT-REDLFANVHNLIPPPYEA 1047
             C +V S  EE+L AIPD VLDSP S  P +  ED+FA+VHN++PPPYEA
Sbjct: 347  ECRSVGSLLEESLRAIPDCVLDSPISGSPESGDEDVFADVHNVLPPPYEA 396