BLASTX nr result
ID: Rheum21_contig00003700
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00003700
(696 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004229388.1| PREDICTED: cytochrome c oxidase subunit 5C-2... 115 2e-23
ref|XP_002515282.1| Cytochrome c oxidase polypeptide Vc, putativ... 113 7e-23
ref|XP_002302765.2| hypothetical protein POPTR_0002s19690g [Popu... 112 9e-23
gb|ESW17141.1| hypothetical protein PHAVU_007G214100g [Phaseolus... 111 2e-22
ref|XP_006387973.1| hypothetical protein POPTR_0440s00200g, part... 111 2e-22
ref|XP_002443358.1| hypothetical protein SORBIDRAFT_08g018180 [S... 110 4e-22
ref|XP_002334244.1| predicted protein [Populus trichocarpa] 110 4e-22
ref|XP_004300448.1| PREDICTED: cytochrome c oxidase subunit 5C-2... 110 6e-22
ref|XP_004962769.1| PREDICTED: cytochrome c oxidase subunit 5C-l... 110 6e-22
ref|XP_002320297.1| hypothetical protein POPTR_0014s11560g [Popu... 110 6e-22
gb|ACG39497.1| cytochrome c oxidase polypeptide Vc [Zea mays] 109 7e-22
ref|NP_001067021.1| Os12g0561000 [Oryza sativa Japonica Group] g... 109 9e-22
gb|AFK48388.1| unknown [Lotus japonicus] 109 9e-22
gb|ADB85086.1| cytochrome c oxidase polypeptide Vc [Jatropha cur... 109 9e-22
sp|Q8VY39.1|CX5C2_HELAN RecName: Full=Cytochrome c oxidase subun... 108 1e-21
ref|XP_003579252.1| PREDICTED: cytochrome c oxidase subunit 5C-l... 108 1e-21
ref|XP_004495903.1| PREDICTED: cytochrome c oxidase subunit 5C-2... 108 1e-21
ref|XP_006574529.1| PREDICTED: cytochrome c oxidase subunit 5C-2... 108 1e-21
gb|EOX95264.1| Cytochrome c oxidase subunit 5C [Theobroma cacao] 108 2e-21
gb|ACU15919.1| unknown [Glycine max] 107 3e-21
>ref|XP_004229388.1| PREDICTED: cytochrome c oxidase subunit 5C-2-like isoform 1
[Solanum lycopersicum] gi|460367052|ref|XP_004229389.1|
PREDICTED: cytochrome c oxidase subunit 5C-2-like
isoform 2 [Solanum lycopersicum]
gi|565364959|ref|XP_006349185.1| PREDICTED: cytochrome c
oxidase subunit 5C-2-like [Solanum tuberosum]
Length = 63
Score = 115 bits (287), Expect = 2e-23
Identities = 53/63 (84%), Positives = 60/63 (95%)
Frame = -2
Query: 614 MAGGRVAHVTLKGPSVVKEIVIASCLGLAAGTLWKMHHWNEQRKVRAFYDMLDKGQISVV 435
MAG R+AH TLKGPSVVKEIVIAS LGLAAG+LWKMHHWNEQRKVR+FYD+L+KG+IS+V
Sbjct: 1 MAGHRIAHATLKGPSVVKEIVIASVLGLAAGSLWKMHHWNEQRKVRSFYDLLEKGEISIV 60
Query: 434 AEE 426
AEE
Sbjct: 61 AEE 63
>ref|XP_002515282.1| Cytochrome c oxidase polypeptide Vc, putative [Ricinus communis]
gi|255559374|ref|XP_002520707.1| Cytochrome c oxidase
polypeptide Vc, putative [Ricinus communis]
gi|223540092|gb|EEF41669.1| Cytochrome c oxidase
polypeptide Vc, putative [Ricinus communis]
gi|223545762|gb|EEF47266.1| Cytochrome c oxidase
polypeptide Vc, putative [Ricinus communis]
Length = 63
Score = 113 bits (282), Expect = 7e-23
Identities = 53/63 (84%), Positives = 57/63 (90%)
Frame = -2
Query: 614 MAGGRVAHVTLKGPSVVKEIVIASCLGLAAGTLWKMHHWNEQRKVRAFYDMLDKGQISVV 435
MAGGR+AH TLKGPSVVKEI I LGLAAG LWKMHHWNEQRKVRAFYD+L+KG+ISVV
Sbjct: 1 MAGGRIAHATLKGPSVVKEICIGIALGLAAGGLWKMHHWNEQRKVRAFYDLLEKGEISVV 60
Query: 434 AEE 426
AEE
Sbjct: 61 AEE 63
>ref|XP_002302765.2| hypothetical protein POPTR_0002s19690g [Populus trichocarpa]
gi|550345404|gb|EEE82038.2| hypothetical protein
POPTR_0002s19690g [Populus trichocarpa]
Length = 73
Score = 112 bits (281), Expect = 9e-23
Identities = 52/64 (81%), Positives = 58/64 (90%)
Frame = -2
Query: 617 DMAGGRVAHVTLKGPSVVKEIVIASCLGLAAGTLWKMHHWNEQRKVRAFYDMLDKGQISV 438
+MAGGRVAHVTLKGPSVVKEI I LGLAAG+LWKMHHWNEQRKVR+FYD+L+KG+I V
Sbjct: 10 EMAGGRVAHVTLKGPSVVKEICIGIALGLAAGSLWKMHHWNEQRKVRSFYDLLEKGEIGV 69
Query: 437 VAEE 426
V EE
Sbjct: 70 VVEE 73
>gb|ESW17141.1| hypothetical protein PHAVU_007G214100g [Phaseolus vulgaris]
Length = 64
Score = 111 bits (277), Expect = 2e-22
Identities = 49/64 (76%), Positives = 58/64 (90%)
Frame = -2
Query: 614 MAGGRVAHVTLKGPSVVKEIVIASCLGLAAGTLWKMHHWNEQRKVRAFYDMLDKGQISVV 435
MAGGR+AH TLKGPSVVKEI+I + LGLAAG++WKMHHWNEQRKVR FYD+L+KG+I VV
Sbjct: 1 MAGGRIAHATLKGPSVVKEIIIGTVLGLAAGSVWKMHHWNEQRKVRTFYDLLEKGEIGVV 60
Query: 434 AEEE 423
EE+
Sbjct: 61 LEEQ 64
>ref|XP_006387973.1| hypothetical protein POPTR_0440s00200g, partial [Populus
trichocarpa] gi|550309083|gb|ERP46887.1| hypothetical
protein POPTR_0440s00200g, partial [Populus trichocarpa]
Length = 111
Score = 111 bits (277), Expect = 2e-22
Identities = 51/64 (79%), Positives = 58/64 (90%)
Frame = -2
Query: 617 DMAGGRVAHVTLKGPSVVKEIVIASCLGLAAGTLWKMHHWNEQRKVRAFYDMLDKGQISV 438
+MAGGRVAHVTLKGPSVVKEI I LGLAAG+LWKMHHWNEQRKVR+FYD+L+KG+I V
Sbjct: 48 EMAGGRVAHVTLKGPSVVKEICIGIALGLAAGSLWKMHHWNEQRKVRSFYDLLEKGEIGV 107
Query: 437 VAEE 426
V +E
Sbjct: 108 VVKE 111
>ref|XP_002443358.1| hypothetical protein SORBIDRAFT_08g018180 [Sorghum bicolor]
gi|241944051|gb|EES17196.1| hypothetical protein
SORBIDRAFT_08g018180 [Sorghum bicolor]
Length = 63
Score = 110 bits (275), Expect = 4e-22
Identities = 52/63 (82%), Positives = 54/63 (85%)
Frame = -2
Query: 614 MAGGRVAHVTLKGPSVVKEIVIASCLGLAAGTLWKMHHWNEQRKVRAFYDMLDKGQISVV 435
MAGGRVAH TLKGPSVVKEI I LGL AG +WKMHHWNEQRK R+FYDMLDKGQISVV
Sbjct: 1 MAGGRVAHATLKGPSVVKEIFIGMTLGLIAGGMWKMHHWNEQRKTRSFYDMLDKGQISVV 60
Query: 434 AEE 426
EE
Sbjct: 61 VEE 63
>ref|XP_002334244.1| predicted protein [Populus trichocarpa]
Length = 63
Score = 110 bits (275), Expect = 4e-22
Identities = 51/63 (80%), Positives = 57/63 (90%)
Frame = -2
Query: 614 MAGGRVAHVTLKGPSVVKEIVIASCLGLAAGTLWKMHHWNEQRKVRAFYDMLDKGQISVV 435
MAGGRVAHVTLKGPSVVKEI I LGLAAG+LWKMHHWNEQRKVR+FYD+L+KG+I VV
Sbjct: 1 MAGGRVAHVTLKGPSVVKEICIGIALGLAAGSLWKMHHWNEQRKVRSFYDLLEKGEIGVV 60
Query: 434 AEE 426
+E
Sbjct: 61 VKE 63
>ref|XP_004300448.1| PREDICTED: cytochrome c oxidase subunit 5C-2-like [Fragaria vesca
subsp. vesca]
Length = 63
Score = 110 bits (274), Expect = 6e-22
Identities = 51/63 (80%), Positives = 57/63 (90%)
Frame = -2
Query: 614 MAGGRVAHVTLKGPSVVKEIVIASCLGLAAGTLWKMHHWNEQRKVRAFYDMLDKGQISVV 435
MAG +VAH TLKGPSVVKEI+I + LGLAAG LWKMHHWNEQRKVR FYD+L+KG+ISVV
Sbjct: 1 MAGHKVAHATLKGPSVVKEIIIGAVLGLAAGGLWKMHHWNEQRKVRTFYDLLEKGEISVV 60
Query: 434 AEE 426
AEE
Sbjct: 61 AEE 63
>ref|XP_004962769.1| PREDICTED: cytochrome c oxidase subunit 5C-like [Setaria italica]
gi|194693600|gb|ACF80884.1| unknown [Zea mays]
gi|194705548|gb|ACF86858.1| unknown [Zea mays]
gi|195605218|gb|ACG24439.1| cytochrome c oxidase
polypeptide Vc [Zea mays] gi|195608682|gb|ACG26171.1|
cytochrome c oxidase polypeptide Vc [Zea mays]
gi|195610044|gb|ACG26852.1| cytochrome c oxidase
polypeptide Vc [Zea mays] gi|195618014|gb|ACG30837.1|
cytochrome c oxidase polypeptide Vc [Zea mays]
gi|195655785|gb|ACG47360.1| cytochrome c oxidase
polypeptide Vc [Zea mays] gi|414868438|tpg|DAA46995.1|
TPA: cytochrome c oxidase polypeptide Vc [Zea mays]
gi|414878119|tpg|DAA55250.1| TPA: cytochrome c oxidase
polypeptide Vc [Zea mays]
Length = 63
Score = 110 bits (274), Expect = 6e-22
Identities = 52/63 (82%), Positives = 54/63 (85%)
Frame = -2
Query: 614 MAGGRVAHVTLKGPSVVKEIVIASCLGLAAGTLWKMHHWNEQRKVRAFYDMLDKGQISVV 435
MAGGRVAH TLKGPSVVKEI I LGL AG +WKMHHWNEQRK R+FYDMLDKGQISVV
Sbjct: 1 MAGGRVAHATLKGPSVVKEIFIGLTLGLIAGGMWKMHHWNEQRKTRSFYDMLDKGQISVV 60
Query: 434 AEE 426
EE
Sbjct: 61 VEE 63
>ref|XP_002320297.1| hypothetical protein POPTR_0014s11560g [Populus trichocarpa]
gi|566203789|ref|XP_006375433.1| hypothetical protein
POPTR_0014s11560g [Populus trichocarpa]
gi|566203792|ref|XP_006375434.1| hypothetical protein
POPTR_0014s11560g [Populus trichocarpa]
gi|118482127|gb|ABK92994.1| unknown [Populus
trichocarpa] gi|118484242|gb|ABK94001.1| unknown
[Populus trichocarpa] gi|118485668|gb|ABK94684.1|
unknown [Populus trichocarpa]
gi|118487717|gb|ABK95683.1| unknown [Populus
trichocarpa] gi|118489690|gb|ABK96646.1| unknown
[Populus trichocarpa x Populus deltoides]
gi|222861070|gb|EEE98612.1| hypothetical protein
POPTR_0014s11560g [Populus trichocarpa]
gi|550323999|gb|ERP53230.1| hypothetical protein
POPTR_0014s11560g [Populus trichocarpa]
gi|550324000|gb|ERP53231.1| hypothetical protein
POPTR_0014s11560g [Populus trichocarpa]
Length = 63
Score = 110 bits (274), Expect = 6e-22
Identities = 50/63 (79%), Positives = 57/63 (90%)
Frame = -2
Query: 614 MAGGRVAHVTLKGPSVVKEIVIASCLGLAAGTLWKMHHWNEQRKVRAFYDMLDKGQISVV 435
MAGGRVAHVTLKGPSVV+E+ I LGL AG+LWKMHHWNEQRKVR+FYD+L+KG+ISVV
Sbjct: 1 MAGGRVAHVTLKGPSVVRELCIGFALGLVAGSLWKMHHWNEQRKVRSFYDLLEKGEISVV 60
Query: 434 AEE 426
EE
Sbjct: 61 VEE 63
>gb|ACG39497.1| cytochrome c oxidase polypeptide Vc [Zea mays]
Length = 77
Score = 109 bits (273), Expect = 7e-22
Identities = 51/64 (79%), Positives = 55/64 (85%)
Frame = -2
Query: 614 MAGGRVAHVTLKGPSVVKEIVIASCLGLAAGTLWKMHHWNEQRKVRAFYDMLDKGQISVV 435
MAGGRVAH TLKGPSVVKEI I LGL AG +WKMHHWNEQRK R+FYDMLDKGQISVV
Sbjct: 1 MAGGRVAHATLKGPSVVKEIFIGLTLGLIAGGMWKMHHWNEQRKTRSFYDMLDKGQISVV 60
Query: 434 AEEE 423
E++
Sbjct: 61 VEDQ 64
>ref|NP_001067021.1| Os12g0561000 [Oryza sativa Japonica Group]
gi|48428177|sp|Q9SXX7.3|COX5C_ORYSJ RecName:
Full=Cytochrome c oxidase subunit 5C; AltName:
Full=Cytochrome c oxidase polypeptide Vc
gi|4850330|dbj|BAA77682.1| cytochrome c oxidase subunit
5c [Oryza sativa Japonica Group]
gi|113649528|dbj|BAF30040.1| Os12g0561000 [Oryza sativa
Japonica Group] gi|125579724|gb|EAZ20870.1| hypothetical
protein OsJ_36508 [Oryza sativa Japonica Group]
Length = 63
Score = 109 bits (272), Expect = 9e-22
Identities = 51/63 (80%), Positives = 54/63 (85%)
Frame = -2
Query: 614 MAGGRVAHVTLKGPSVVKEIVIASCLGLAAGTLWKMHHWNEQRKVRAFYDMLDKGQISVV 435
MAGGR+AH TLKGPSVVKEI I LGL AG LWKMHHWNEQRK R+FYDML+KGQISVV
Sbjct: 1 MAGGRIAHATLKGPSVVKEICIGLTLGLVAGGLWKMHHWNEQRKTRSFYDMLEKGQISVV 60
Query: 434 AEE 426
EE
Sbjct: 61 VEE 63
>gb|AFK48388.1| unknown [Lotus japonicus]
Length = 64
Score = 109 bits (272), Expect = 9e-22
Identities = 50/64 (78%), Positives = 56/64 (87%)
Frame = -2
Query: 614 MAGGRVAHVTLKGPSVVKEIVIASCLGLAAGTLWKMHHWNEQRKVRAFYDMLDKGQISVV 435
MAG R+AH TLKGPSVVKEIVI LGLAAG++WKMHHWNEQRK R FYD+L+KG+I VV
Sbjct: 1 MAGPRIAHATLKGPSVVKEIVIGMVLGLAAGSVWKMHHWNEQRKTRTFYDLLEKGEIGVV 60
Query: 434 AEEE 423
AEEE
Sbjct: 61 AEEE 64
>gb|ADB85086.1| cytochrome c oxidase polypeptide Vc [Jatropha curcas]
Length = 63
Score = 109 bits (272), Expect = 9e-22
Identities = 50/63 (79%), Positives = 56/63 (88%)
Frame = -2
Query: 614 MAGGRVAHVTLKGPSVVKEIVIASCLGLAAGTLWKMHHWNEQRKVRAFYDMLDKGQISVV 435
MAGG++AH TLKGPSVVKEI I LGLAAG LWKMHHWNEQRKVRAFYD+L+KG+ISVV
Sbjct: 1 MAGGKIAHATLKGPSVVKEICIGIALGLAAGGLWKMHHWNEQRKVRAFYDLLEKGEISVV 60
Query: 434 AEE 426
+E
Sbjct: 61 VDE 63
>sp|Q8VY39.1|CX5C2_HELAN RecName: Full=Cytochrome c oxidase subunit 5C-2; AltName:
Full=Cytochrome c oxidase polypeptide Vc-2
gi|18409602|gb|AAL67939.1| cytochrome c oxidase subunit
5c [Helianthus annuus]
Length = 64
Score = 108 bits (271), Expect = 1e-21
Identities = 50/64 (78%), Positives = 56/64 (87%)
Frame = -2
Query: 614 MAGGRVAHVTLKGPSVVKEIVIASCLGLAAGTLWKMHHWNEQRKVRAFYDMLDKGQISVV 435
M GGRVAH LKGPSVVKE+VI + LGLAAG LWKMHHWNEQRK RAFYD+L+KG+ISVV
Sbjct: 1 MGGGRVAHPVLKGPSVVKELVIGTVLGLAAGGLWKMHHWNEQRKTRAFYDLLEKGEISVV 60
Query: 434 AEEE 423
+EE
Sbjct: 61 VDEE 64
>ref|XP_003579252.1| PREDICTED: cytochrome c oxidase subunit 5C-like [Brachypodium
distachyon] gi|357161935|ref|XP_003579253.1| PREDICTED:
cytochrome c oxidase subunit 5C-like [Brachypodium
distachyon] gi|2493852|sp|Q42841.3|COX5C_HORVU RecName:
Full=Cytochrome c oxidase subunit 5C; AltName:
Full=Cytochrome c oxidase polypeptide Vc
gi|1070356|emb|CAA92107.1| cytochrome c oxidase, Vc
subunit [Hordeum vulgare subsp. vulgare]
gi|473894931|gb|EMS48910.1| Cytochrome c oxidase subunit
5C [Triticum urartu] gi|475558729|gb|EMT13154.1|
Cytochrome c oxidase subunit 5C [Aegilops tauschii]
Length = 63
Score = 108 bits (271), Expect = 1e-21
Identities = 51/63 (80%), Positives = 54/63 (85%)
Frame = -2
Query: 614 MAGGRVAHVTLKGPSVVKEIVIASCLGLAAGTLWKMHHWNEQRKVRAFYDMLDKGQISVV 435
MAGGRVAH TLKGPSVVKEI I LGL AG +WKMHHWNEQRK R+FYDML+KGQISVV
Sbjct: 1 MAGGRVAHATLKGPSVVKEIFIGLTLGLVAGGMWKMHHWNEQRKTRSFYDMLEKGQISVV 60
Query: 434 AEE 426
EE
Sbjct: 61 VEE 63
>ref|XP_004495903.1| PREDICTED: cytochrome c oxidase subunit 5C-2-like [Cicer arietinum]
Length = 64
Score = 108 bits (271), Expect = 1e-21
Identities = 48/64 (75%), Positives = 57/64 (89%)
Frame = -2
Query: 614 MAGGRVAHVTLKGPSVVKEIVIASCLGLAAGTLWKMHHWNEQRKVRAFYDMLDKGQISVV 435
MAG R+AH TLKGPSVVKEI+I LG+AAG++WKMHHWNEQRK R FYD+L+KG+ISV+
Sbjct: 1 MAGPRIAHATLKGPSVVKEIIIGITLGIAAGSVWKMHHWNEQRKTRTFYDLLEKGEISVI 60
Query: 434 AEEE 423
AEEE
Sbjct: 61 AEEE 64
>ref|XP_006574529.1| PREDICTED: cytochrome c oxidase subunit 5C-2 [Glycine max]
Length = 64
Score = 108 bits (271), Expect = 1e-21
Identities = 49/64 (76%), Positives = 57/64 (89%)
Frame = -2
Query: 614 MAGGRVAHVTLKGPSVVKEIVIASCLGLAAGTLWKMHHWNEQRKVRAFYDMLDKGQISVV 435
MAG R+AH TLKGPSVVKEI+I LGLAAG++WKMHHWNEQRK R FYD+L+KG+ISVV
Sbjct: 1 MAGPRIAHATLKGPSVVKEIIIGITLGLAAGSVWKMHHWNEQRKTRTFYDLLEKGEISVV 60
Query: 434 AEEE 423
AEE+
Sbjct: 61 AEEQ 64
>gb|EOX95264.1| Cytochrome c oxidase subunit 5C [Theobroma cacao]
Length = 63
Score = 108 bits (270), Expect = 2e-21
Identities = 51/63 (80%), Positives = 54/63 (85%)
Frame = -2
Query: 614 MAGGRVAHVTLKGPSVVKEIVIASCLGLAAGTLWKMHHWNEQRKVRAFYDMLDKGQISVV 435
MAG R+AH TLKGPSVVKEI+I LG AG LWKMHHWNEQRKVRAFYDML+KG ISVV
Sbjct: 1 MAGPRIAHATLKGPSVVKEIIIGITLGFCAGGLWKMHHWNEQRKVRAFYDMLEKGDISVV 60
Query: 434 AEE 426
AEE
Sbjct: 61 AEE 63
>gb|ACU15919.1| unknown [Glycine max]
Length = 64
Score = 107 bits (268), Expect = 3e-21
Identities = 48/64 (75%), Positives = 57/64 (89%)
Frame = -2
Query: 614 MAGGRVAHVTLKGPSVVKEIVIASCLGLAAGTLWKMHHWNEQRKVRAFYDMLDKGQISVV 435
MAG R+AH TL+GPSVVKEI+I LGLAAG++WKMHHWNEQRK R FYD+L+KG+ISVV
Sbjct: 1 MAGPRIAHATLRGPSVVKEIIIGITLGLAAGSVWKMHHWNEQRKTRTFYDLLEKGEISVV 60
Query: 434 AEEE 423
AEE+
Sbjct: 61 AEEQ 64