BLASTX nr result
ID: Rheum21_contig00003250
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00003250
(410 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY01045.1| HMG-Y-related protein B [Theobroma cacao] 84 2e-14
gb|EMJ23090.1| hypothetical protein PRUPE_ppa018145mg [Prunus pe... 84 2e-14
ref|XP_002311516.1| high-mobility-group family protein [Populus ... 82 7e-14
ref|XP_002284720.1| PREDICTED: HMG-Y-related protein A [Vitis vi... 79 6e-13
emb|CAN71833.1| hypothetical protein VITISV_005586 [Vitis vinifera] 79 6e-13
ref|XP_002315870.2| hypothetical protein POPTR_0010s11980g [Popu... 78 1e-12
ref|XP_002527784.1| Histone H1, putative [Ricinus communis] gi|2... 77 3e-12
ref|XP_006469214.1| PREDICTED: HMG-Y-related protein A-like [Cit... 75 9e-12
ref|XP_006448210.1| hypothetical protein CICLE_v10016374mg [Citr... 75 9e-12
gb|EXB90895.1| HMG-Y-related protein A [Morus notabilis] 73 3e-11
ref|XP_004297466.1| PREDICTED: HMG-Y-related protein A-like [Fra... 72 6e-11
ref|XP_004150116.1| PREDICTED: HMG-Y-related protein A-like [Cuc... 72 8e-11
dbj|BAA11767.1| high mobility group protein [Canavalia gladiata]... 72 1e-10
dbj|BAA11766.1| high mobility group protein [Canavalia gladiata]... 69 9e-10
ref|XP_006291855.1| hypothetical protein CARUB_v10018031mg [Caps... 67 2e-09
emb|CAA61747.1| HMGI/Y [Pisum sativum] gi|1435175|emb|CAA67752.1... 66 4e-09
gb|EOY03920.1| High mobility group A isoform 2 [Theobroma cacao] 66 4e-09
gb|EOY03919.1| High mobility group A isoform 1 [Theobroma cacao] 66 4e-09
ref|XP_004490811.1| PREDICTED: HMG-Y-related protein A-like [Cic... 66 6e-09
ref|XP_006416960.1| hypothetical protein EUTSA_v10008756mg [Eutr... 65 9e-09
>gb|EOY01045.1| HMG-Y-related protein B [Theobroma cacao]
Length = 190
Score = 84.0 bits (206), Expect = 2e-14
Identities = 47/104 (45%), Positives = 58/104 (55%)
Frame = -2
Query: 409 IESSNLDLPDDHSTLLSDALEKMKESGQLVFANDNYVKPDLDXXXXXXXXXXXXXXXXXX 230
IES++ DLP HSTLLS L KMK+SGQ+V + +NY+KPD +
Sbjct: 50 IESTHPDLPAAHSTLLSHHLNKMKQSGQIVMSKNNYLKPDPNAPPKRGRGRPPKPKVPLP 109
Query: 229 XXXXXXXXXXRGRPPKAKDPLTPAPEPKKAASVGRPRGRQPKKA 98
RGRPPK KDP P+ +PK + GRPRGR PKKA
Sbjct: 110 PGTVVSPPRPRGRPPKPKDPFAPS-KPKTSGGTGRPRGRPPKKA 152
>gb|EMJ23090.1| hypothetical protein PRUPE_ppa018145mg [Prunus persica]
Length = 188
Score = 84.0 bits (206), Expect = 2e-14
Identities = 45/104 (43%), Positives = 56/104 (53%)
Frame = -2
Query: 409 IESSNLDLPDDHSTLLSDALEKMKESGQLVFANDNYVKPDLDXXXXXXXXXXXXXXXXXX 230
IES+ DLP H+TLL+ L KMK+SG+LV +NY+KPD +
Sbjct: 48 IESTYGDLPPAHATLLAHHLNKMKQSGELVLVKNNYMKPDPNAPPKRGRGRPPKPKVPLP 107
Query: 229 XXXXXXXXXXRGRPPKAKDPLTPAPEPKKAASVGRPRGRQPKKA 98
RGRPPK +DP +P EPK + GRPRGR PKKA
Sbjct: 108 PGTVVSPPRPRGRPPKPRDPFSPQAEPKSPSGTGRPRGRPPKKA 151
>ref|XP_002311516.1| high-mobility-group family protein [Populus trichocarpa]
gi|222851336|gb|EEE88883.1| high-mobility-group family
protein [Populus trichocarpa]
Length = 207
Score = 82.0 bits (201), Expect = 7e-14
Identities = 47/107 (43%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Frame = -2
Query: 409 IESSNLDLPDDHSTLLSDALEKMKESGQLVFANDNYVKPDLDXXXXXXXXXXXXXXXXXX 230
IES++ DLP HSTLLS L KMK+SGQLV +NY+KPD +
Sbjct: 65 IESTHPDLPPAHSTLLSHHLNKMKQSGQLVLVKNNYMKPDPNAPPKRGRGRPPKPKLPTP 124
Query: 229 XXXXXXXXXXRGRPPKAKDPLTPAPEPKK---AASVGRPRGRQPKKA 98
RGRPPK +DP P PKK + GRPRGR PK A
Sbjct: 125 PGTVSGPPRPRGRPPKPRDPFAPVASPKKKTTSTGTGRPRGRPPKNA 171
>ref|XP_002284720.1| PREDICTED: HMG-Y-related protein A [Vitis vinifera]
gi|297737664|emb|CBI26865.3| unnamed protein product
[Vitis vinifera]
Length = 182
Score = 79.0 bits (193), Expect = 6e-13
Identities = 46/104 (44%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Frame = -2
Query: 409 IESSNLDLPDDHSTLLSDALEKMKESGQLVFANDNYVKPDLDXXXXXXXXXXXXXXXXXX 230
IES+ DLP HSTLL+ L KMK+SG LV +NY+KPD +
Sbjct: 45 IESTYGDLPAAHSTLLAHHLNKMKQSGDLVMVKNNYMKPDPNAPPRRGRGRPPKPKVPLP 104
Query: 229 XXXXXXXXXXRGRPPKAKDPLTPAPEPKKAAS-VGRPRGRQPKK 101
RGRPPK +DP P PKKA+S G+PRGR PKK
Sbjct: 105 PGTVLAPPRPRGRPPKPRDPFAPVSPPKKASSGSGKPRGRPPKK 148
>emb|CAN71833.1| hypothetical protein VITISV_005586 [Vitis vinifera]
Length = 182
Score = 79.0 bits (193), Expect = 6e-13
Identities = 46/104 (44%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Frame = -2
Query: 409 IESSNLDLPDDHSTLLSDALEKMKESGQLVFANDNYVKPDLDXXXXXXXXXXXXXXXXXX 230
IES+ DLP HSTLL+ L KMK+SG LV +NY+KPD +
Sbjct: 45 IESTYGDLPAAHSTLLAHHLNKMKQSGDLVMVKNNYMKPDPNAPPRRGRGRPPKPKVPLP 104
Query: 229 XXXXXXXXXXRGRPPKAKDPLTPAPEPKKAAS-VGRPRGRQPKK 101
RGRPPK +DP P PKKA+S G+PRGR PKK
Sbjct: 105 PGTVLAPPRPRGRPPKPRDPFAPVSPPKKASSGSGKPRGRPPKK 148
>ref|XP_002315870.2| hypothetical protein POPTR_0010s11980g [Populus trichocarpa]
gi|118485070|gb|ABK94398.1| unknown [Populus
trichocarpa] gi|550329615|gb|EEF02041.2| hypothetical
protein POPTR_0010s11980g [Populus trichocarpa]
Length = 215
Score = 78.2 bits (191), Expect = 1e-12
Identities = 45/107 (42%), Positives = 54/107 (50%), Gaps = 3/107 (2%)
Frame = -2
Query: 409 IESSNLDLPDDHSTLLSDALEKMKESGQLVFANDNYVKPDLDXXXXXXXXXXXXXXXXXX 230
IES++ DLP H TLLS L K+K+SGQLV +NY+KPD +
Sbjct: 73 IESTHPDLPPAHGTLLSHHLNKLKQSGQLVLVKNNYMKPDPNAPPKRGRGRPPKPKLPTP 132
Query: 229 XXXXXXXXXXRGRPPKAKDPLTPAPEPKK---AASVGRPRGRQPKKA 98
RGRPPK +DP P PKK + GRPRGR PK A
Sbjct: 133 PGSVAGPPRPRGRPPKPRDPFAPVASPKKKTASPGSGRPRGRPPKNA 179
>ref|XP_002527784.1| Histone H1, putative [Ricinus communis] gi|223532819|gb|EEF34594.1|
Histone H1, putative [Ricinus communis]
Length = 199
Score = 76.6 bits (187), Expect = 3e-12
Identities = 44/105 (41%), Positives = 53/105 (50%), Gaps = 3/105 (2%)
Frame = -2
Query: 409 IESSNLDLPDDHSTLLSDALEKMKESGQLVFANDNYVKPDLDXXXXXXXXXXXXXXXXXX 230
+E++ DLP H+TLLS L KMK+SGQLV +NY+KPD +
Sbjct: 57 METTYPDLPPAHTTLLSHHLNKMKQSGQLVLVKNNYMKPDPNAPPKRGRGRPPKPKAPLP 116
Query: 229 XXXXXXXXXXRGRPPKAKDPLTPAPEPKK---AASVGRPRGRQPK 104
RGRPPK +DP P PKK A GRPRGR PK
Sbjct: 117 PGAVIAPPRPRGRPPKPRDPFAPVASPKKKIATAPTGRPRGRPPK 161
>ref|XP_006469214.1| PREDICTED: HMG-Y-related protein A-like [Citrus sinensis]
Length = 210
Score = 75.1 bits (183), Expect = 9e-12
Identities = 44/106 (41%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Frame = -2
Query: 409 IESSNLDLPDDHSTLLSDALEKMKESGQLVFANDNYVKPDLDXXXXXXXXXXXXXXXXXX 230
+ES+ DLP H+TLL+ L KMK+SG+LV +NY+KPD +
Sbjct: 61 MESAYPDLPPAHTTLLAHHLNKMKQSGELVMVKNNYMKPDPNAPPKRGRGRPPKPKDPLP 120
Query: 229 XXXXXXXXXXRGRPPKAKDPLTPAPEPKKAAS--VGRPRGRQPKKA 98
RGRPPK +DP P KK +S GRPRGR PKKA
Sbjct: 121 PGTVLSPPRPRGRPPKPRDPFAPPAASKKKSSGGSGRPRGRPPKKA 166
>ref|XP_006448210.1| hypothetical protein CICLE_v10016374mg [Citrus clementina]
gi|557550821|gb|ESR61450.1| hypothetical protein
CICLE_v10016374mg [Citrus clementina]
Length = 251
Score = 75.1 bits (183), Expect = 9e-12
Identities = 44/106 (41%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Frame = -2
Query: 409 IESSNLDLPDDHSTLLSDALEKMKESGQLVFANDNYVKPDLDXXXXXXXXXXXXXXXXXX 230
+ES+ DLP H+TLL+ L KMK+SG+LV +NY+KPD +
Sbjct: 102 MESAYPDLPPAHTTLLAHHLNKMKQSGELVMVKNNYMKPDPNAPPKRGRGRPPKPKDPLP 161
Query: 229 XXXXXXXXXXRGRPPKAKDPLTPAPEPKKAAS--VGRPRGRQPKKA 98
RGRPPK +DP P KK +S GRPRGR PKKA
Sbjct: 162 PGTVLSPPRPRGRPPKPRDPFAPPAASKKKSSGGSGRPRGRPPKKA 207
>gb|EXB90895.1| HMG-Y-related protein A [Morus notabilis]
Length = 184
Score = 73.2 bits (178), Expect = 3e-11
Identities = 40/104 (38%), Positives = 54/104 (51%)
Frame = -2
Query: 409 IESSNLDLPDDHSTLLSDALEKMKESGQLVFANDNYVKPDLDXXXXXXXXXXXXXXXXXX 230
IE + +LP H+TLL+ L +M++SG+LV + Y+KPD +
Sbjct: 48 IEETCGNLPAAHTTLLAHHLNRMRQSGELVLVKNCYMKPDPNAPPRRGRGRPPKPKAPLP 107
Query: 229 XXXXXXXXXXRGRPPKAKDPLTPAPEPKKAASVGRPRGRQPKKA 98
RGRPPK +DP +P P KK+ GRPRGR PKKA
Sbjct: 108 TGSAVASPRPRGRPPKPRDPFSPPPSQKKSPGSGRPRGRPPKKA 151
>ref|XP_004297466.1| PREDICTED: HMG-Y-related protein A-like [Fragaria vesca subsp.
vesca]
Length = 195
Score = 72.4 bits (176), Expect = 6e-11
Identities = 47/111 (42%), Positives = 58/111 (52%), Gaps = 7/111 (6%)
Frame = -2
Query: 409 IESSNL-DLPDDHSTLLSDALEKMKESGQLVFANDNYVKPDLD---XXXXXXXXXXXXXX 242
IES++ DLP H+TLL+ LEKMK+SG+L F +NY+KPD +
Sbjct: 50 IESTHTTDLPPAHATLLAQHLEKMKQSGELAFVKNNYMKPDPNAPPKRGRGRPPKPKVPG 109
Query: 241 XXXXXXXXXXXXXXRGRPPKAKDPLTPAPEPKKAAS---VGRPRGRQPKKA 98
RGRPPKAKDP P P + + S GRPRGR PKKA
Sbjct: 110 AEGAAAVVSSPPRPRGRPPKAKDPFFPTPIVQSSTSGGGSGRPRGRPPKKA 160
>ref|XP_004150116.1| PREDICTED: HMG-Y-related protein A-like [Cucumis sativus]
gi|449523968|ref|XP_004168995.1| PREDICTED:
HMG-Y-related protein A-like [Cucumis sativus]
Length = 186
Score = 72.0 bits (175), Expect = 8e-11
Identities = 42/104 (40%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
Frame = -2
Query: 409 IESSNLDLPDDHSTLLSDALEKMKESGQLVFANDNYVKPDLDXXXXXXXXXXXXXXXXXX 230
IES+ DLP +TLL+ L+ MK++GQL+F +NY+KPD +
Sbjct: 49 IESTYGDLPPAFTTLLTHHLDVMKQTGQLLFIKNNYMKPDPNAPPKRGRGRPPKPKVPLP 108
Query: 229 XXXXXXXXXXRGRPPKAKDPLTPAPEPKK--AASVGRPRGRQPK 104
RGRPPK KDP P +PKK + GRPRGR PK
Sbjct: 109 PGTVVSPPRPRGRPPKPKDPFAPISQPKKKTTSGSGRPRGRPPK 152
>dbj|BAA11767.1| high mobility group protein [Canavalia gladiata]
gi|1483175|dbj|BAA13134.1| high mobility group protein
[Canavalia gladiata]
Length = 178
Score = 71.6 bits (174), Expect = 1e-10
Identities = 44/103 (42%), Positives = 54/103 (52%)
Frame = -2
Query: 409 IESSNLDLPDDHSTLLSDALEKMKESGQLVFANDNYVKPDLDXXXXXXXXXXXXXXXXXX 230
IES+ +LPD HSTLL+ L KMKESG+LVF +NY+KPD
Sbjct: 41 IESTCGELPDGHSTLLAHHLNKMKESGELVFLKNNYMKPDPTSPPKRGRGRPPKPKVPLP 100
Query: 229 XXXXXXXXXXRGRPPKAKDPLTPAPEPKKAASVGRPRGRQPKK 101
RGRPPK + T +P+ K + GRPRGR PKK
Sbjct: 101 PGTVLSPPRPRGRPPKDPNAPTKSPKAKVSTGSGRPRGR-PKK 142
>dbj|BAA11766.1| high mobility group protein [Canavalia gladiata]
gi|1483173|dbj|BAA13133.1| high mobility group protein
[Canavalia gladiata]
Length = 178
Score = 68.6 bits (166), Expect = 9e-10
Identities = 45/105 (42%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Frame = -2
Query: 409 IESSNLDLPDDHSTLLSDALEKMKESGQLVFANDNYVKPDLDXXXXXXXXXXXXXXXXXX 230
IES+ +LPD H+TLL+ L KMK+SG+LVF +NY+KPD +
Sbjct: 41 IESTYGELPDGHATLLAHHLNKMKDSGELVFLKNNYMKPDPNAPPKRGRGRPPKPKVPLP 100
Query: 229 XXXXXXXXXXRGRPPKAKDPLTPAPEPKKAASV--GRPRGRQPKK 101
RGRPP KDP P PK S GRPRGR PKK
Sbjct: 101 PGTVLSPPRPRGRPP--KDPNAPPKSPKTKVSTGSGRPRGR-PKK 142
>ref|XP_006291855.1| hypothetical protein CARUB_v10018031mg [Capsella rubella]
gi|482560562|gb|EOA24753.1| hypothetical protein
CARUB_v10018031mg [Capsella rubella]
Length = 207
Score = 67.4 bits (163), Expect = 2e-09
Identities = 43/110 (39%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Frame = -2
Query: 409 IESSNLDLPDDHSTLLSDALEKMKESGQLVFANDNYVKPDLD-------XXXXXXXXXXX 251
IES+ + LP H+TLL+ L MK+SGQLV +NY+KPD +
Sbjct: 60 IESTQITLPPSHNTLLNYHLNHMKQSGQLVIVKNNYMKPDPNGPPKRGRGRPPKPKPDVD 119
Query: 250 XXXXXXXXXXXXXXXXXRGRPPKAKDPLTPAPEPKKAASVGRPRGRQPKK 101
RGRPPK+KD + P+PK +S GRPRGR PKK
Sbjct: 120 PSNAAAVSAPSASPPRPRGRPPKSKDSQS-EPKPKAPSSSGRPRGRPPKK 168
>emb|CAA61747.1| HMGI/Y [Pisum sativum] gi|1435175|emb|CAA67752.1| HMG-I/Y [Pisum
sativum]
Length = 197
Score = 66.2 bits (160), Expect = 4e-09
Identities = 44/102 (43%), Positives = 51/102 (50%)
Frame = -2
Query: 409 IESSNLDLPDDHSTLLSDALEKMKESGQLVFANDNYVKPDLDXXXXXXXXXXXXXXXXXX 230
IES +LP+ HS +L L +MKESG LVFA +NY++PD
Sbjct: 41 IESVYGELPEGHSVVLLYHLNQMKESGDLVFAKNNYLRPD-------------------- 80
Query: 229 XXXXXXXXXXRGRPPKAKDPLTPAPEPKKAASVGRPRGRQPK 104
RGRPPKAKDPL A P A S RPRGR PK
Sbjct: 81 --PNAPPKRGRGRPPKAKDPL--ASPPSGAVSTPRPRGRPPK 118
>gb|EOY03920.1| High mobility group A isoform 2 [Theobroma cacao]
Length = 191
Score = 66.2 bits (160), Expect = 4e-09
Identities = 39/104 (37%), Positives = 52/104 (50%)
Frame = -2
Query: 409 IESSNLDLPDDHSTLLSDALEKMKESGQLVFANDNYVKPDLDXXXXXXXXXXXXXXXXXX 230
IES DLP H+TLLS L +MKE+G+L+F +NY+K D +
Sbjct: 42 IESQYGDLPAGHTTLLSHHLNRMKETGELIFWKNNYMKADPNAPPRRGRGRPPKSKDPLP 101
Query: 229 XXXXXXXXXXRGRPPKAKDPLTPAPEPKKAASVGRPRGRQPKKA 98
RGRPPK + +P+PK A+ G+PRGR K A
Sbjct: 102 PGVVLSPARPRGRPPKDPNAPPKSPKPKVASGTGKPRGRPRKMA 145
>gb|EOY03919.1| High mobility group A isoform 1 [Theobroma cacao]
Length = 190
Score = 66.2 bits (160), Expect = 4e-09
Identities = 39/104 (37%), Positives = 52/104 (50%)
Frame = -2
Query: 409 IESSNLDLPDDHSTLLSDALEKMKESGQLVFANDNYVKPDLDXXXXXXXXXXXXXXXXXX 230
IES DLP H+TLLS L +MKE+G+L+F +NY+K D +
Sbjct: 41 IESQYGDLPAGHTTLLSHHLNRMKETGELIFWKNNYMKADPNAPPRRGRGRPPKSKDPLP 100
Query: 229 XXXXXXXXXXRGRPPKAKDPLTPAPEPKKAASVGRPRGRQPKKA 98
RGRPPK + +P+PK A+ G+PRGR K A
Sbjct: 101 PGVVLSPARPRGRPPKDPNAPPKSPKPKVASGTGKPRGRPRKMA 144
>ref|XP_004490811.1| PREDICTED: HMG-Y-related protein A-like [Cicer arietinum]
Length = 203
Score = 65.9 bits (159), Expect = 6e-09
Identities = 45/124 (36%), Positives = 59/124 (47%), Gaps = 21/124 (16%)
Frame = -2
Query: 409 IESSNLDLPDDHSTLLSDALEKMKESGQLVFANDNYVKPDLDXXXXXXXXXXXXXXXXXX 230
IES+ +LP+ HS L+S L ++KESG+LVF+ +NY+KPD
Sbjct: 41 IESTYGELPEGHSNLVSHHLNQLKESGELVFSKNNYMKPD-------------------- 80
Query: 229 XXXXXXXXXXRGRPPKAKDPLTP---------------------APEPKKAASVGRPRGR 113
RGRPPK KDPL P +P+PK ++ GRPRGR
Sbjct: 81 --PNAPPKRGRGRPPKPKDPLAPLATTVLSPPRPRGRPPKDPNASPKPKVSSGSGRPRGR 138
Query: 112 QPKK 101
PKK
Sbjct: 139 -PKK 141
>ref|XP_006416960.1| hypothetical protein EUTSA_v10008756mg [Eutrema salsugineum]
gi|557094731|gb|ESQ35313.1| hypothetical protein
EUTSA_v10008756mg [Eutrema salsugineum]
Length = 215
Score = 65.1 bits (157), Expect = 9e-09
Identities = 43/114 (37%), Positives = 55/114 (48%), Gaps = 10/114 (8%)
Frame = -2
Query: 409 IESSNLDLPDDHSTLLSDALEKMKESGQLVFANDNYVKPDLD----------XXXXXXXX 260
IES+ LP HSTLLS L +MK++GQL+ +NY+KPD D
Sbjct: 59 IESTQQTLPPSHSTLLSFHLNQMKKTGQLLMVKNNYMKPDPDAPPKRGRGRPPKQKTQTE 118
Query: 259 XXXXXXXXXXXXXXXXXXXXRGRPPKAKDPLTPAPEPKKAASVGRPRGRQPKKA 98
RGRPPK +DP + PE K A+ GRPRGR PK++
Sbjct: 119 SAVAAATVTETTVAADPPRSRGRPPKPRDP-SIQPEEKIASGSGRPRGRPPKRS 171