BLASTX nr result
ID: Rheum21_contig00002408
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00002408
(608 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXC03823.1| 40S ribosomal protein S28 [Morus notabilis] 105 7e-21
ref|XP_006481678.1| PREDICTED: 40S ribosomal protein S28-like [C... 105 7e-21
ref|XP_006429965.1| hypothetical protein CICLE_v10013157mg [Citr... 105 7e-21
ref|XP_002520788.1| ribosomal protein S28, putative [Ricinus com... 105 1e-20
gb|EMJ03959.1| hypothetical protein PRUPE_ppa013411mg [Prunus pe... 105 1e-20
gb|EOY09636.1| Nucleic acid-binding, OB-fold-like protein [Theob... 104 2e-20
ref|XP_002311925.1| 40S ribosomal protein S28 [Populus trichocar... 104 2e-20
gb|EXB53855.1| 40S ribosomal protein S28 [Morus notabilis] 104 2e-20
gb|EXC37044.1| 40S ribosomal protein S28 [Morus notabilis] 103 3e-20
gb|EXB79987.1| Nicotinamide mononucleotide adenylyltransferase 1... 103 3e-20
gb|ESW35015.1| hypothetical protein PHAVU_001G199400g [Phaseolus... 103 3e-20
gb|AEC10961.1| ribosomal protein s28 [Camellia sinensis] 103 4e-20
gb|ESW17738.1| hypothetical protein PHAVU_007G264100g [Phaseolus... 103 5e-20
ref|XP_004154925.1| PREDICTED: 40S ribosomal protein S28-like [C... 103 5e-20
ref|XP_004138229.1| PREDICTED: 40S ribosomal protein S28-like [C... 103 5e-20
emb|CAA10101.1| ribosomal protein S28 [Prunus persica] gi|394772... 103 5e-20
ref|XP_004299346.1| PREDICTED: 40S ribosomal protein S28-like [F... 102 6e-20
ref|XP_003521522.1| PREDICTED: 40S ribosomal protein S28-like is... 102 8e-20
gb|AAM78552.1|AF522185_1 ribosomal protein small subunit 28 [Hel... 102 8e-20
ref|XP_003618578.1| 30S ribosomal protein S28e [Medicago truncat... 101 1e-19
>gb|EXC03823.1| 40S ribosomal protein S28 [Morus notabilis]
Length = 155
Score = 105 bits (263), Expect = 7e-21
Identities = 51/55 (92%), Positives = 54/55 (98%)
Frame = +3
Query: 63 TEMDSQIKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 227
T M+SQ+KHA+VVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT
Sbjct: 89 TRMESQVKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 143
>ref|XP_006481678.1| PREDICTED: 40S ribosomal protein S28-like [Citrus sinensis]
Length = 65
Score = 105 bits (263), Expect = 7e-21
Identities = 52/53 (98%), Positives = 53/53 (100%)
Frame = +3
Query: 69 MDSQIKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 227
MDSQIKHA+VVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT
Sbjct: 1 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 53
>ref|XP_006429965.1| hypothetical protein CICLE_v10013157mg [Citrus clementina]
gi|557532022|gb|ESR43205.1| hypothetical protein
CICLE_v10013157mg [Citrus clementina]
Length = 114
Score = 105 bits (263), Expect = 7e-21
Identities = 52/53 (98%), Positives = 53/53 (100%)
Frame = +3
Query: 69 MDSQIKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 227
MDSQIKHA+VVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT
Sbjct: 50 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 102
>ref|XP_002520788.1| ribosomal protein S28, putative [Ricinus communis]
gi|255581574|ref|XP_002531592.1| ribosomal protein S28,
putative [Ricinus communis] gi|223528788|gb|EEF30795.1|
ribosomal protein S28, putative [Ricinus communis]
gi|223539919|gb|EEF41497.1| ribosomal protein S28,
putative [Ricinus communis] gi|313586485|gb|ADR71253.1|
40S ribosomal protein S28A [Hevea brasiliensis]
gi|313586487|gb|ADR71254.1| 40S ribosomal protein S28B
[Hevea brasiliensis]
Length = 65
Score = 105 bits (262), Expect = 1e-20
Identities = 51/53 (96%), Positives = 53/53 (100%)
Frame = +3
Query: 69 MDSQIKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 227
MDSQIKHA+VVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGD+LT
Sbjct: 1 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDVLT 53
>gb|EMJ03959.1| hypothetical protein PRUPE_ppa013411mg [Prunus persica]
Length = 124
Score = 105 bits (261), Expect = 1e-20
Identities = 55/69 (79%), Positives = 59/69 (85%)
Frame = +3
Query: 21 FSQRPLGFSAISY*TEMDSQIKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKG 200
+S+RP+ S MDS IKHA+VVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKG
Sbjct: 44 YSRRPVLQSQPLDNQRMDSTIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKG 103
Query: 201 PVREGDILT 227
PVREGDILT
Sbjct: 104 PVREGDILT 112
>gb|EOY09636.1| Nucleic acid-binding, OB-fold-like protein [Theobroma cacao]
Length = 65
Score = 104 bits (260), Expect = 2e-20
Identities = 51/53 (96%), Positives = 53/53 (100%)
Frame = +3
Query: 69 MDSQIKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 227
MDSQIKHA+VVKVMGRTGSRGQVTQVRVKFLDDQNR+IMRNVKGPVREGDILT
Sbjct: 1 MDSQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRYIMRNVKGPVREGDILT 53
>ref|XP_002311925.1| 40S ribosomal protein S28 [Populus trichocarpa]
gi|224110082|ref|XP_002315409.1| 40S ribosomal protein
S28 [Populus trichocarpa] gi|118481584|gb|ABK92734.1|
unknown [Populus trichocarpa]
gi|118481768|gb|ABK92823.1| unknown [Populus
trichocarpa] gi|118482102|gb|ABK92982.1| unknown
[Populus trichocarpa] gi|118482699|gb|ABK93268.1|
unknown [Populus trichocarpa]
gi|222851745|gb|EEE89292.1| 40S ribosomal protein S28
[Populus trichocarpa] gi|222864449|gb|EEF01580.1| 40S
ribosomal protein S28 [Populus trichocarpa]
Length = 65
Score = 104 bits (260), Expect = 2e-20
Identities = 50/53 (94%), Positives = 53/53 (100%)
Frame = +3
Query: 69 MDSQIKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 227
MDSQIKHA+VVK+MGRTGSRGQVTQVRVKF+DDQNRFIMRNVKGPVREGDILT
Sbjct: 1 MDSQIKHAVVVKIMGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDILT 53
>gb|EXB53855.1| 40S ribosomal protein S28 [Morus notabilis]
Length = 86
Score = 104 bits (259), Expect = 2e-20
Identities = 55/74 (74%), Positives = 62/74 (83%), Gaps = 3/74 (4%)
Frame = +3
Query: 15 TPFSQRPLG---FSAISY*TEMDSQIKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRFIM 185
T +++ LG + I Y M+SQ+KHA+VVKVMGRTGSRGQVTQVRVKFLDDQNRFIM
Sbjct: 2 TSHTKKNLGRQFYRCIQY-KRMESQVKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIM 60
Query: 186 RNVKGPVREGDILT 227
RNVKGPVREGDILT
Sbjct: 61 RNVKGPVREGDILT 74
>gb|EXC37044.1| 40S ribosomal protein S28 [Morus notabilis]
Length = 65
Score = 103 bits (258), Expect = 3e-20
Identities = 50/53 (94%), Positives = 53/53 (100%)
Frame = +3
Query: 69 MDSQIKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 227
M+SQ+KHA+VVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT
Sbjct: 1 MESQVKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 53
>gb|EXB79987.1| Nicotinamide mononucleotide adenylyltransferase 1 [Morus notabilis]
Length = 275
Score = 103 bits (258), Expect = 3e-20
Identities = 50/53 (94%), Positives = 53/53 (100%)
Frame = +3
Query: 69 MDSQIKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 227
M+SQ+KHA+VVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT
Sbjct: 211 MESQVKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 263
>gb|ESW35015.1| hypothetical protein PHAVU_001G199400g [Phaseolus vulgaris]
Length = 65
Score = 103 bits (258), Expect = 3e-20
Identities = 51/53 (96%), Positives = 52/53 (98%)
Frame = +3
Query: 69 MDSQIKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 227
MDSQ+KHALVVKVMGRTGSRGQVTQVRVKFLDDQNR IMRNVKGPVREGDILT
Sbjct: 1 MDSQVKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDILT 53
>gb|AEC10961.1| ribosomal protein s28 [Camellia sinensis]
Length = 65
Score = 103 bits (257), Expect = 4e-20
Identities = 49/53 (92%), Positives = 53/53 (100%)
Frame = +3
Query: 69 MDSQIKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 227
M+SQIKHA+VVKVMGRTGSRGQVTQVRVKF+DDQNRFIMRNVKGPVREGD+LT
Sbjct: 1 MESQIKHAIVVKVMGRTGSRGQVTQVRVKFIDDQNRFIMRNVKGPVREGDVLT 53
>gb|ESW17738.1| hypothetical protein PHAVU_007G264100g [Phaseolus vulgaris]
Length = 65
Score = 103 bits (256), Expect = 5e-20
Identities = 50/53 (94%), Positives = 52/53 (98%)
Frame = +3
Query: 69 MDSQIKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 227
MDSQ+KHA+VVKVMGRTGSRGQVTQVRVKFLDDQNR IMRNVKGPVREGDILT
Sbjct: 1 MDSQVKHAIVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDILT 53
>ref|XP_004154925.1| PREDICTED: 40S ribosomal protein S28-like [Cucumis sativus]
Length = 68
Score = 103 bits (256), Expect = 5e-20
Identities = 50/53 (94%), Positives = 53/53 (100%)
Frame = +3
Query: 69 MDSQIKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 227
M+SQIKHA+VVKVMGRTGSRGQVTQVRVKFLDDQNR+IMRNVKGPVREGDILT
Sbjct: 4 MESQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRYIMRNVKGPVREGDILT 56
>ref|XP_004138229.1| PREDICTED: 40S ribosomal protein S28-like [Cucumis sativus]
gi|449440917|ref|XP_004138230.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449440919|ref|XP_004138231.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449440921|ref|XP_004138232.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449463340|ref|XP_004149392.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449463342|ref|XP_004149393.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449477091|ref|XP_004154926.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449477094|ref|XP_004154927.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449477096|ref|XP_004154928.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449477100|ref|XP_004154929.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449503792|ref|XP_004162179.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449503794|ref|XP_004162180.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
gi|449503796|ref|XP_004162181.1| PREDICTED: 40S
ribosomal protein S28-like [Cucumis sativus]
Length = 65
Score = 103 bits (256), Expect = 5e-20
Identities = 50/53 (94%), Positives = 53/53 (100%)
Frame = +3
Query: 69 MDSQIKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 227
M+SQIKHA+VVKVMGRTGSRGQVTQVRVKFLDDQNR+IMRNVKGPVREGDILT
Sbjct: 1 MESQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRYIMRNVKGPVREGDILT 53
>emb|CAA10101.1| ribosomal protein S28 [Prunus persica] gi|3947721|emb|CAA10102.1|
ribosomal protein S28 [Prunus persica]
gi|3947723|emb|CAA10103.1| ribosomal protein S28 [Prunus
persica] gi|462398368|gb|EMJ04036.1| hypothetical
protein PRUPE_ppa014541mg [Prunus persica]
Length = 65
Score = 103 bits (256), Expect = 5e-20
Identities = 50/53 (94%), Positives = 52/53 (98%)
Frame = +3
Query: 69 MDSQIKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 227
MDS +KHA+VVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT
Sbjct: 1 MDSTVKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 53
>ref|XP_004299346.1| PREDICTED: 40S ribosomal protein S28-like [Fragaria vesca subsp.
vesca] gi|470135244|ref|XP_004303433.1| PREDICTED: 40S
ribosomal protein S28-like [Fragaria vesca subsp. vesca]
Length = 65
Score = 102 bits (255), Expect = 6e-20
Identities = 50/53 (94%), Positives = 52/53 (98%)
Frame = +3
Query: 69 MDSQIKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 227
M+S +KHALVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT
Sbjct: 1 MESTVKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 53
>ref|XP_003521522.1| PREDICTED: 40S ribosomal protein S28-like isoform X1 [Glycine max]
gi|356549946|ref|XP_003543351.1| PREDICTED: 40S
ribosomal protein S28 [Glycine max]
gi|356572714|ref|XP_003554511.1| PREDICTED: 40S
ribosomal protein S28-like isoform X1 [Glycine max]
gi|571446492|ref|XP_006577108.1| PREDICTED: 40S
ribosomal protein S28-like [Glycine max]
gi|571446533|ref|XP_006577119.1| PREDICTED: 40S
ribosomal protein S28-like isoform X2 [Glycine max]
gi|571559237|ref|XP_006604678.1| PREDICTED: 40S
ribosomal protein S28-like [Glycine max]
gi|571559303|ref|XP_006604691.1| PREDICTED: 40S
ribosomal protein S28-like isoform X2 [Glycine max]
gi|571559307|ref|XP_006604692.1| PREDICTED: 40S
ribosomal protein S28-like isoform X3 [Glycine max]
gi|255628293|gb|ACU14491.1| unknown [Glycine max]
Length = 65
Score = 102 bits (254), Expect = 8e-20
Identities = 50/53 (94%), Positives = 52/53 (98%)
Frame = +3
Query: 69 MDSQIKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 227
M+SQ+KHALVVKVMGRTGSRGQVTQVRVKFLDDQNR IMRNVKGPVREGDILT
Sbjct: 1 MESQVKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDILT 53
>gb|AAM78552.1|AF522185_1 ribosomal protein small subunit 28 [Helianthus annuus]
Length = 65
Score = 102 bits (254), Expect = 8e-20
Identities = 49/53 (92%), Positives = 53/53 (100%)
Frame = +3
Query: 69 MDSQIKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 227
M+SQIKHA+VVKVMGR+GSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGD+LT
Sbjct: 1 MESQIKHAVVVKVMGRSGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDVLT 53
>ref|XP_003618578.1| 30S ribosomal protein S28e [Medicago truncatula]
gi|355493593|gb|AES74796.1| 30S ribosomal protein S28e
[Medicago truncatula]
Length = 75
Score = 101 bits (252), Expect = 1e-19
Identities = 50/53 (94%), Positives = 52/53 (98%)
Frame = +3
Query: 69 MDSQIKHALVVKVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDILT 227
M+SQIKHA+VVKVMGRTGSRGQVTQVRVKFLDDQNR IMRNVKGPVREGDILT
Sbjct: 11 MESQIKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRHIMRNVKGPVREGDILT 63