BLASTX nr result
ID: Rheum21_contig00002394
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00002394
(745 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002531284.1| Photosystem II reaction center W protein, ch... 105 2e-20
ref|XP_004247215.1| PREDICTED: photosystem II reaction center W ... 105 2e-20
ref|XP_002520988.1| Photosystem II reaction center W protein, ch... 103 6e-20
ref|XP_006352753.1| PREDICTED: photosystem II reaction center W ... 103 8e-20
ref|XP_006349749.1| PREDICTED: photosystem II reaction center W ... 102 1e-19
ref|XP_004165637.1| PREDICTED: photosystem II reaction center W ... 102 1e-19
ref|XP_004146953.1| PREDICTED: photosystem II reaction center W ... 102 1e-19
ref|XP_002440047.1| hypothetical protein SORBIDRAFT_09g025010 [S... 102 2e-19
gb|ABL97943.1| component of 6.1 kDa polypeptide of photosystem I... 101 2e-19
gb|AGE93844.1| chloroplast photosystem II reaction center W prot... 101 3e-19
ref|XP_004242350.1| PREDICTED: photosystem II reaction center W ... 100 4e-19
ref|XP_002458578.1| hypothetical protein SORBIDRAFT_03g036090 [S... 100 4e-19
ref|NP_001150205.1| LOC100283835 [Zea mays] gi|195637556|gb|ACG3... 100 4e-19
ref|XP_006410160.1| hypothetical protein EUTSA_v10017409mg [Eutr... 100 7e-19
gb|EXB26577.1| Photosystem II reaction center W protein [Morus n... 99 1e-18
ref|XP_006443912.1| hypothetical protein CICLE_v10024455mg [Citr... 99 1e-18
ref|XP_004289903.1| PREDICTED: photosystem II reaction center W ... 99 1e-18
ref|XP_006576193.1| PREDICTED: uncharacterized protein LOC100526... 99 1e-18
gb|ESW34491.1| hypothetical protein PHAVU_001G157100g [Phaseolus... 99 1e-18
gb|ESW34490.1| hypothetical protein PHAVU_001G157100g [Phaseolus... 99 1e-18
>ref|XP_002531284.1| Photosystem II reaction center W protein, chloroplast precursor,
putative [Ricinus communis] gi|223529117|gb|EEF31097.1|
Photosystem II reaction center W protein, chloroplast
precursor, putative [Ricinus communis]
Length = 134
Score = 105 bits (262), Expect = 2e-20
Identities = 50/54 (92%), Positives = 53/54 (98%)
Frame = +2
Query: 314 LVDDRMSTEGTGLPFGLSNNLLGWILLGVFALIWSLYTVYTSTLDEDEESGLSL 475
LVD+RMSTEGTGLPFGLSNNLLGWILLGVFALIWSLYTVYTSTLDED++S LSL
Sbjct: 81 LVDERMSTEGTGLPFGLSNNLLGWILLGVFALIWSLYTVYTSTLDEDDDSALSL 134
>ref|XP_004247215.1| PREDICTED: photosystem II reaction center W protein,
chloroplastic-like [Solanum lycopersicum]
Length = 132
Score = 105 bits (261), Expect = 2e-20
Identities = 50/54 (92%), Positives = 52/54 (96%)
Frame = +2
Query: 314 LVDDRMSTEGTGLPFGLSNNLLGWILLGVFALIWSLYTVYTSTLDEDEESGLSL 475
LVD+RMSTEGTGLPFGLSNNLLGWILLGVF LIWSLYTVYTS LDEDEESG+SL
Sbjct: 79 LVDERMSTEGTGLPFGLSNNLLGWILLGVFGLIWSLYTVYTSGLDEDEESGMSL 132
>ref|XP_002520988.1| Photosystem II reaction center W protein, chloroplast precursor,
putative [Ricinus communis] gi|223539825|gb|EEF41405.1|
Photosystem II reaction center W protein, chloroplast
precursor, putative [Ricinus communis]
Length = 132
Score = 103 bits (257), Expect = 6e-20
Identities = 48/54 (88%), Positives = 52/54 (96%)
Frame = +2
Query: 314 LVDDRMSTEGTGLPFGLSNNLLGWILLGVFALIWSLYTVYTSTLDEDEESGLSL 475
LVD+R+STEGTGLPFGLSNNLLGWILLGVF LIWS YTVYTSTLD+DE+SGLSL
Sbjct: 79 LVDERLSTEGTGLPFGLSNNLLGWILLGVFGLIWSFYTVYTSTLDDDEDSGLSL 132
>ref|XP_006352753.1| PREDICTED: photosystem II reaction center W protein,
chloroplastic-like [Solanum tuberosum]
Length = 132
Score = 103 bits (256), Expect = 8e-20
Identities = 47/54 (87%), Positives = 52/54 (96%)
Frame = +2
Query: 314 LVDDRMSTEGTGLPFGLSNNLLGWILLGVFALIWSLYTVYTSTLDEDEESGLSL 475
LVD+RMSTEGTGLPFGLSNNLLGWIL GVF L+WSLYTVYTS+LDEDE+SG+SL
Sbjct: 79 LVDERMSTEGTGLPFGLSNNLLGWILFGVFGLVWSLYTVYTSSLDEDEDSGMSL 132
>ref|XP_006349749.1| PREDICTED: photosystem II reaction center W protein,
chloroplastic-like [Solanum tuberosum]
Length = 132
Score = 102 bits (254), Expect = 1e-19
Identities = 48/54 (88%), Positives = 51/54 (94%)
Frame = +2
Query: 314 LVDDRMSTEGTGLPFGLSNNLLGWILLGVFALIWSLYTVYTSTLDEDEESGLSL 475
LVD+RMSTEGTGLPFGLSNNLLGWIL GVF LIWSLYTVYTS +D+DEESGLSL
Sbjct: 79 LVDERMSTEGTGLPFGLSNNLLGWILFGVFGLIWSLYTVYTSGIDDDEESGLSL 132
>ref|XP_004165637.1| PREDICTED: photosystem II reaction center W protein,
chloroplastic-like isoform 1 [Cucumis sativus]
Length = 145
Score = 102 bits (254), Expect = 1e-19
Identities = 48/54 (88%), Positives = 52/54 (96%)
Frame = +2
Query: 314 LVDDRMSTEGTGLPFGLSNNLLGWILLGVFALIWSLYTVYTSTLDEDEESGLSL 475
LVD+R+STEGTGLPFGLSNNLLGWILLGVFALIW+ Y VYTSTL+EDEESGLSL
Sbjct: 92 LVDERLSTEGTGLPFGLSNNLLGWILLGVFALIWAFYIVYTSTLEEDEESGLSL 145
>ref|XP_004146953.1| PREDICTED: photosystem II reaction center W protein,
chloroplastic-like [Cucumis sativus]
gi|449517209|ref|XP_004165638.1| PREDICTED: photosystem
II reaction center W protein, chloroplastic-like isoform
2 [Cucumis sativus]
Length = 137
Score = 102 bits (254), Expect = 1e-19
Identities = 48/54 (88%), Positives = 52/54 (96%)
Frame = +2
Query: 314 LVDDRMSTEGTGLPFGLSNNLLGWILLGVFALIWSLYTVYTSTLDEDEESGLSL 475
LVD+R+STEGTGLPFGLSNNLLGWILLGVFALIW+ Y VYTSTL+EDEESGLSL
Sbjct: 84 LVDERLSTEGTGLPFGLSNNLLGWILLGVFALIWAFYIVYTSTLEEDEESGLSL 137
>ref|XP_002440047.1| hypothetical protein SORBIDRAFT_09g025010 [Sorghum bicolor]
gi|241945332|gb|EES18477.1| hypothetical protein
SORBIDRAFT_09g025010 [Sorghum bicolor]
Length = 63
Score = 102 bits (253), Expect = 2e-19
Identities = 49/54 (90%), Positives = 51/54 (94%)
Frame = +2
Query: 314 LVDDRMSTEGTGLPFGLSNNLLGWILLGVFALIWSLYTVYTSTLDEDEESGLSL 475
LVD+RMSTEGTGL GLSNNLLGWILLGVF LIWSLYTVYTSTLDEDE+SGLSL
Sbjct: 10 LVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTVYTSTLDEDEDSGLSL 63
>gb|ABL97943.1| component of 6.1 kDa polypeptide of photosystem II reaction center
[Brassica rapa]
Length = 133
Score = 101 bits (252), Expect = 2e-19
Identities = 48/54 (88%), Positives = 50/54 (92%)
Frame = +2
Query: 314 LVDDRMSTEGTGLPFGLSNNLLGWILLGVFALIWSLYTVYTSTLDEDEESGLSL 475
LVDDRMSTEGTGLPFGLSNNLLGWILLGVF LIW+ Y YTS+LDEDEESGLSL
Sbjct: 80 LVDDRMSTEGTGLPFGLSNNLLGWILLGVFGLIWTFYFTYTSSLDEDEESGLSL 133
>gb|AGE93844.1| chloroplast photosystem II reaction center W protein, partial
[Posidonia oceanica]
Length = 104
Score = 101 bits (251), Expect = 3e-19
Identities = 49/54 (90%), Positives = 52/54 (96%)
Frame = +2
Query: 314 LVDDRMSTEGTGLPFGLSNNLLGWILLGVFALIWSLYTVYTSTLDEDEESGLSL 475
LVD+RMSTEGTGL GLSNNLLGWILLGVFALIWSLY+VYTSTL+EDEESGLSL
Sbjct: 51 LVDERMSTEGTGLGLGLSNNLLGWILLGVFALIWSLYSVYTSTLEEDEESGLSL 104
>ref|XP_004242350.1| PREDICTED: photosystem II reaction center W protein,
chloroplastic-like [Solanum lycopersicum]
Length = 128
Score = 100 bits (250), Expect = 4e-19
Identities = 46/54 (85%), Positives = 51/54 (94%)
Frame = +2
Query: 314 LVDDRMSTEGTGLPFGLSNNLLGWILLGVFALIWSLYTVYTSTLDEDEESGLSL 475
LVD+RMSTEGTGLPFGLSNNLLGWIL GVF L+WSLYTVYTS+LDEDE+S +SL
Sbjct: 75 LVDERMSTEGTGLPFGLSNNLLGWILFGVFGLVWSLYTVYTSSLDEDEDSAMSL 128
>ref|XP_002458578.1| hypothetical protein SORBIDRAFT_03g036090 [Sorghum bicolor]
gi|241930553|gb|EES03698.1| hypothetical protein
SORBIDRAFT_03g036090 [Sorghum bicolor]
Length = 126
Score = 100 bits (250), Expect = 4e-19
Identities = 49/54 (90%), Positives = 50/54 (92%)
Frame = +2
Query: 314 LVDDRMSTEGTGLPFGLSNNLLGWILLGVFALIWSLYTVYTSTLDEDEESGLSL 475
LVD+RMSTEGTGL GLSNNLLGWILLGVF LIWSLYTVYTS LDEDEESGLSL
Sbjct: 73 LVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTVYTSDLDEDEESGLSL 126
>ref|NP_001150205.1| LOC100283835 [Zea mays] gi|195637556|gb|ACG38246.1| photosystem II
reaction center W protein [Zea mays]
Length = 127
Score = 100 bits (250), Expect = 4e-19
Identities = 48/54 (88%), Positives = 51/54 (94%)
Frame = +2
Query: 314 LVDDRMSTEGTGLPFGLSNNLLGWILLGVFALIWSLYTVYTSTLDEDEESGLSL 475
LVD+RMSTEGTGL GLSNNLLGWILLGVF LIWSLYTVYTSTLDED++SGLSL
Sbjct: 74 LVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTVYTSTLDEDDDSGLSL 127
>ref|XP_006410160.1| hypothetical protein EUTSA_v10017409mg [Eutrema salsugineum]
gi|557111329|gb|ESQ51613.1| hypothetical protein
EUTSA_v10017409mg [Eutrema salsugineum]
Length = 133
Score = 100 bits (248), Expect = 7e-19
Identities = 47/54 (87%), Positives = 50/54 (92%)
Frame = +2
Query: 314 LVDDRMSTEGTGLPFGLSNNLLGWILLGVFALIWSLYTVYTSTLDEDEESGLSL 475
LVDDRMSTEGTGLPFGLSNNLLGWIL GVF LIW+ Y VYTS+L+EDEESGLSL
Sbjct: 80 LVDDRMSTEGTGLPFGLSNNLLGWILFGVFGLIWTFYFVYTSSLEEDEESGLSL 133
>gb|EXB26577.1| Photosystem II reaction center W protein [Morus notabilis]
Length = 136
Score = 99.4 bits (246), Expect = 1e-18
Identities = 46/54 (85%), Positives = 51/54 (94%)
Frame = +2
Query: 314 LVDDRMSTEGTGLPFGLSNNLLGWILLGVFALIWSLYTVYTSTLDEDEESGLSL 475
LVD+R+STEGTGLPFGLSNNLL WILLGVF L+W+LY VYTSTL+EDEESGLSL
Sbjct: 83 LVDERLSTEGTGLPFGLSNNLLSWILLGVFGLVWALYFVYTSTLEEDEESGLSL 136
>ref|XP_006443912.1| hypothetical protein CICLE_v10024455mg [Citrus clementina]
gi|568851829|ref|XP_006479589.1| PREDICTED: photosystem
II reaction center W protein, chloroplastic-like [Citrus
sinensis] gi|557546174|gb|ESR57152.1| hypothetical
protein CICLE_v10024455mg [Citrus clementina]
Length = 135
Score = 99.4 bits (246), Expect = 1e-18
Identities = 47/54 (87%), Positives = 50/54 (92%)
Frame = +2
Query: 314 LVDDRMSTEGTGLPFGLSNNLLGWILLGVFALIWSLYTVYTSTLDEDEESGLSL 475
LVD+RMSTEGTGLPFGLSNNLLGWILLGVF LIW+LY Y S+LDEDEESGLSL
Sbjct: 82 LVDERMSTEGTGLPFGLSNNLLGWILLGVFGLIWALYIPYASSLDEDEESGLSL 135
>ref|XP_004289903.1| PREDICTED: photosystem II reaction center W protein,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 136
Score = 99.4 bits (246), Expect = 1e-18
Identities = 47/54 (87%), Positives = 50/54 (92%)
Frame = +2
Query: 314 LVDDRMSTEGTGLPFGLSNNLLGWILLGVFALIWSLYTVYTSTLDEDEESGLSL 475
LVDDR+STEGTGLPFGLSNNLLGWILLGVFALIW+ Y YTS L+EDEESGLSL
Sbjct: 83 LVDDRLSTEGTGLPFGLSNNLLGWILLGVFALIWTFYFTYTSGLEEDEESGLSL 136
>ref|XP_006576193.1| PREDICTED: uncharacterized protein LOC100526966 isoform X1 [Glycine
max]
Length = 123
Score = 99.0 bits (245), Expect = 1e-18
Identities = 46/54 (85%), Positives = 51/54 (94%)
Frame = +2
Query: 314 LVDDRMSTEGTGLPFGLSNNLLGWILLGVFALIWSLYTVYTSTLDEDEESGLSL 475
LVD+R+STEGTGLPFGLSNNLLGWIL GVF LIW+L+ VYTSTL+EDEESGLSL
Sbjct: 70 LVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALFFVYTSTLEEDEESGLSL 123
>gb|ESW34491.1| hypothetical protein PHAVU_001G157100g [Phaseolus vulgaris]
Length = 132
Score = 99.0 bits (245), Expect = 1e-18
Identities = 46/54 (85%), Positives = 51/54 (94%)
Frame = +2
Query: 314 LVDDRMSTEGTGLPFGLSNNLLGWILLGVFALIWSLYTVYTSTLDEDEESGLSL 475
LVD+R+STEGTGLPFGLSNNLLGWIL GVF LIW+LY VYTS+L+EDEESGLSL
Sbjct: 79 LVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFVYTSSLEEDEESGLSL 132
>gb|ESW34490.1| hypothetical protein PHAVU_001G157100g [Phaseolus vulgaris]
Length = 135
Score = 99.0 bits (245), Expect = 1e-18
Identities = 46/54 (85%), Positives = 51/54 (94%)
Frame = +2
Query: 314 LVDDRMSTEGTGLPFGLSNNLLGWILLGVFALIWSLYTVYTSTLDEDEESGLSL 475
LVD+R+STEGTGLPFGLSNNLLGWIL GVF LIW+LY VYTS+L+EDEESGLSL
Sbjct: 82 LVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFVYTSSLEEDEESGLSL 135