BLASTX nr result
ID: Rheum21_contig00002151
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00002151
(685 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002269173.2| PREDICTED: uncharacterized protein LOC100258... 66 2e-18
emb|CBI23781.3| unnamed protein product [Vitis vinifera] 62 2e-17
ref|XP_002529548.1| hypothetical protein RCOM_0407930 [Ricinus c... 59 1e-14
ref|XP_002529549.1| hypothetical protein RCOM_0408240 [Ricinus c... 62 2e-13
ref|XP_006471125.1| PREDICTED: uncharacterized protein LOC102625... 50 8e-11
gb|EOX98071.1| Basic helix-loop-helix DNA-binding superfamily pr... 50 9e-10
ref|XP_002888825.1| predicted protein [Arabidopsis lyrata subsp.... 57 2e-09
ref|NP_177276.4| basic helix-loop-helix (bHLH) DNA-binding super... 57 2e-09
ref|XP_006300960.1| hypothetical protein CARUB_v10021349mg [Caps... 57 2e-09
ref|XP_006838370.1| hypothetical protein AMTR_s00002p00041060 [A... 57 5e-06
ref|XP_004249749.1| PREDICTED: uncharacterized protein LOC101257... 45 7e-06
gb|AAG51686.1|AC016972_5 hypothetical protein; 62064-61297 [Arab... 44 1e-05
>ref|XP_002269173.2| PREDICTED: uncharacterized protein LOC100258265 [Vitis vinifera]
Length = 338
Score = 65.9 bits (159), Expect(2) = 2e-18
Identities = 28/53 (52%), Positives = 41/53 (77%)
Frame = +1
Query: 187 KKMDHNAKERARRTHLNTAYLALRSSLPESHKPNKKWSASYLIDRAVDHIPQL 345
+K +HNAKER RR LN +YLALRS LP++ + K+WS+ +IDR +++IP+L
Sbjct: 167 RKENHNAKERVRRMQLNASYLALRSLLPDARRSKKRWSSPRIIDRVLEYIPEL 219
Score = 52.8 bits (125), Expect(2) = 2e-18
Identities = 25/74 (33%), Positives = 43/74 (58%)
Frame = +3
Query: 426 SICINEVKRGQLILQICHQRNKVDFFSEFLDKLESQGMEVLNASVLDPSDYRSSRHIHIQ 605
++ + EV++G++I+QIC QR + S + +E +GM +++AS L D R H+HIQ
Sbjct: 254 TVSVTEVRKGEVIVQICMQREPGNVLSNLMQNVEGEGMRIMSASSLHVCDERVCYHLHIQ 313
Query: 606 MEVLNASVLDPSDY 647
V + SD+
Sbjct: 314 SMVNSYYESSTSDH 327
>emb|CBI23781.3| unnamed protein product [Vitis vinifera]
Length = 320
Score = 62.0 bits (149), Expect(2) = 2e-17
Identities = 28/53 (52%), Positives = 42/53 (79%)
Frame = +1
Query: 187 KKMDHNAKERARRTHLNTAYLALRSSLPESHKPNKKWSASYLIDRAVDHIPQL 345
+K +HNAKER RR LN +YLALRS LP++ + +K+WS+ +IDR +++IP+L
Sbjct: 167 RKENHNAKERVRRMQLNASYLALRSLLPDARR-SKRWSSPRIIDRVLEYIPEL 218
Score = 53.9 bits (128), Expect(2) = 2e-17
Identities = 23/65 (35%), Positives = 42/65 (64%)
Frame = +3
Query: 426 SICINEVKRGQLILQICHQRNKVDFFSEFLDKLESQGMEVLNASVLDPSDYRSSRHIHIQ 605
++ + EV++G++I+QIC QR + S + +E +GM +++AS L D R H+HIQ
Sbjct: 253 TVSVTEVRKGEVIVQICMQREPGNVLSNLMQNVEGEGMRIMSASSLHVCDERVCYHLHIQ 312
Query: 606 MEVLN 620
+ +L+
Sbjct: 313 VCILH 317
>ref|XP_002529548.1| hypothetical protein RCOM_0407930 [Ricinus communis]
gi|223530996|gb|EEF32851.1| hypothetical protein
RCOM_0407930 [Ricinus communis]
Length = 260
Score = 59.3 bits (142), Expect(2) = 1e-14
Identities = 25/53 (47%), Positives = 37/53 (69%)
Frame = +1
Query: 187 KKMDHNAKERARRTHLNTAYLALRSSLPESHKPNKKWSASYLIDRAVDHIPQL 345
KK HNAKE+ RR LN +YLAL S L S + K+W+A ++D+ +++IP+L
Sbjct: 105 KKQQHNAKEKVRRMKLNASYLALGSLLSNSRRSKKRWTAPVIVDKVLEYIPEL 157
Score = 46.6 bits (109), Expect(2) = 1e-14
Identities = 22/60 (36%), Positives = 37/60 (61%)
Frame = +3
Query: 426 SICINEVKRGQLILQICHQRNKVDFFSEFLDKLESQGMEVLNASVLDPSDYRSSRHIHIQ 605
++ ++EVK G+LI+QIC Q ++ S + LE++ M + +AS + D R H+HIQ
Sbjct: 193 TVSVHEVKHGELIIQICMQTDQDKGLSILMQNLEAESMVISSASSIGVCDDRICYHVHIQ 252
>ref|XP_002529549.1| hypothetical protein RCOM_0408240 [Ricinus communis]
gi|223530997|gb|EEF32852.1| hypothetical protein
RCOM_0408240 [Ricinus communis]
Length = 395
Score = 62.4 bits (150), Expect(2) = 2e-13
Identities = 26/53 (49%), Positives = 39/53 (73%)
Frame = +1
Query: 187 KKMDHNAKERARRTHLNTAYLALRSSLPESHKPNKKWSASYLIDRAVDHIPQL 345
KK +HNAKE+ RR LN +YLAL S LP S + K+W+A +ID+ +++IP++
Sbjct: 241 KKQEHNAKEKVRRMKLNASYLALGSLLPNSRRSKKRWTAPVIIDKVLEYIPEV 293
Score = 39.7 bits (91), Expect(2) = 2e-13
Identities = 16/44 (36%), Positives = 30/44 (68%)
Frame = +3
Query: 426 SICINEVKRGQLILQICHQRNKVDFFSEFLDKLESQGMEVLNAS 557
++ ++E+K G+LI+Q+C Q N+ S + LE++GM + +AS
Sbjct: 329 TVSVHEIKHGELIIQVCMQTNQDKGLSILMQNLEAEGMVISSAS 372
>ref|XP_006471125.1| PREDICTED: uncharacterized protein LOC102625584 [Citrus sinensis]
Length = 398
Score = 50.1 bits (118), Expect(2) = 8e-11
Identities = 26/50 (52%), Positives = 36/50 (72%)
Frame = +1
Query: 196 DHNAKERARRTHLNTAYLALRSSLPESHKPNKKWSASYLIDRAVDHIPQL 345
+HNAKER RR L YL+L + LP+S + KK SA +IDRA+++IP+L
Sbjct: 231 EHNAKERVRRMKLYATYLSLGALLPDS-ESKKKRSAPAIIDRALEYIPEL 279
Score = 43.1 bits (100), Expect(2) = 8e-11
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +3
Query: 426 SICINEVKRGQLILQI-CHQRNKVDFFSEFLDKLESQGMEVLNASVLDPSDYRSSRHIHI 602
S+ ++EV++G +I+QI C ++ FS+ L LE++ +++ S L + R H+HI
Sbjct: 315 SVLVHEVEKGDVIIQIICSPNDEKTVFSKLLQNLEAKEKGIISVSTLCVCEKRVCYHLHI 374
Query: 603 QME 611
QM+
Sbjct: 375 QMQ 377
>gb|EOX98071.1| Basic helix-loop-helix DNA-binding superfamily protein, putative
[Theobroma cacao]
Length = 160
Score = 50.4 bits (119), Expect(2) = 9e-10
Identities = 24/60 (40%), Positives = 39/60 (65%)
Frame = +3
Query: 426 SICINEVKRGQLILQICHQRNKVDFFSEFLDKLESQGMEVLNASVLDPSDYRSSRHIHIQ 605
S+ ++E+++G++I QI Q + D FS L K+E +GM +++AS L SD H+HIQ
Sbjct: 77 SVSVHEIRQGEVITQIYSQIHPDDAFSNLLQKVEEEGMCIMSASTLQVSDDGVCYHLHIQ 136
Score = 39.3 bits (90), Expect(2) = 9e-10
Identities = 17/38 (44%), Positives = 29/38 (76%)
Frame = +1
Query: 232 LNTAYLALRSSLPESHKPNKKWSASYLIDRAVDHIPQL 345
L+ +YLAL + +P+S + K+ SA +IDR+V++IP+L
Sbjct: 3 LHASYLALGALIPDSSRSKKRKSAPLIIDRSVEYIPEL 40
>ref|XP_002888825.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297334666|gb|EFH65084.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 235
Score = 57.0 bits (136), Expect(2) = 2e-09
Identities = 28/54 (51%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Frame = +1
Query: 187 KKMDHNAKERARRTHLNTAYLALRSSLPE-SHKPNKKWSASYLIDRAVDHIPQL 345
KK DHNAKER RR L+ +YL L + LP+ S KKWSA +ID + +IP+L
Sbjct: 63 KKQDHNAKERLRRMRLHASYLTLGTLLPDHSSSSKKKWSAPSIIDNVITYIPKL 116
Score = 31.6 bits (70), Expect(2) = 2e-09
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 456 QLILQICHQRNKVDFFSEFLDKLESQGMEVLNAS 557
+ ++QIC ++ D FS L +E QG+ VL+AS
Sbjct: 154 EAVVQICLKKENEDEFSNLLHVMELQGLSVLSAS 187
>ref|NP_177276.4| basic helix-loop-helix (bHLH) DNA-binding superfamily protein
[Arabidopsis thaliana] gi|332197051|gb|AEE35172.1| basic
helix-loop-helix (bHLH) DNA-binding superfamily protein
[Arabidopsis thaliana]
Length = 234
Score = 56.6 bits (135), Expect(2) = 2e-09
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Frame = +1
Query: 187 KKMDHNAKERARRTHLNTAYLALRSSLPE--SHKPNKKWSASYLIDRAVDHIPQL 345
KK DHNAKER RR L+ +YL L + LP+ S KKWSA +ID + +IP+L
Sbjct: 61 KKQDHNAKERLRRMRLHASYLTLGTLLPDHSSSSSKKKWSAPSIIDNVITYIPKL 115
Score = 31.6 bits (70), Expect(2) = 2e-09
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 456 QLILQICHQRNKVDFFSEFLDKLESQGMEVLNAS 557
+ ++QIC ++ D FS L +E QG+ VL+AS
Sbjct: 153 EAVVQICLKKENEDEFSNLLHVMEVQGLSVLSAS 186
>ref|XP_006300960.1| hypothetical protein CARUB_v10021349mg [Capsella rubella]
gi|482569670|gb|EOA33858.1| hypothetical protein
CARUB_v10021349mg [Capsella rubella]
Length = 232
Score = 57.0 bits (136), Expect(2) = 2e-09
Identities = 28/55 (50%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Frame = +1
Query: 187 KKMDHNAKERARRTHLNTAYLALRSSLPE--SHKPNKKWSASYLIDRAVDHIPQL 345
KK DHNAKER RR L+ +YL L + LP+ S KKWSA +ID + +IP+L
Sbjct: 59 KKQDHNAKERLRRMRLHASYLTLGTLLPDHSSSSSKKKWSAPSIIDNVISYIPKL 113
Score = 31.2 bits (69), Expect(2) = 2e-09
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 456 QLILQICHQRNKVDFFSEFLDKLESQGMEVLNAS 557
+ ++QIC ++ D FS L +E QG+ +L+AS
Sbjct: 151 EAVVQICLKKENEDEFSNLLHVMEVQGLSILSAS 184
>ref|XP_006838370.1| hypothetical protein AMTR_s00002p00041060 [Amborella trichopoda]
gi|548840876|gb|ERN00939.1| hypothetical protein
AMTR_s00002p00041060 [Amborella trichopoda]
Length = 252
Score = 57.0 bits (136), Expect = 5e-06
Identities = 27/53 (50%), Positives = 34/53 (64%)
Frame = +1
Query: 187 KKMDHNAKERARRTHLNTAYLALRSSLPESHKPNKKWSASYLIDRAVDHIPQL 345
KK HNA ER RR LNTA+ LR LP+S +KWS + +AVD+IP+L
Sbjct: 48 KKQSHNANERERRKRLNTAFSNLRFLLPDSSISKRKWSIPTTVSKAVDYIPEL 100
>ref|XP_004249749.1| PREDICTED: uncharacterized protein LOC101257916 [Solanum
lycopersicum]
Length = 737
Score = 45.1 bits (105), Expect(2) = 7e-06
Identities = 24/53 (45%), Positives = 33/53 (62%)
Frame = +1
Query: 187 KKMDHNAKERARRTHLNTAYLALRSSLPESHKPNKKWSASYLIDRAVDHIPQL 345
KK++HNA ER RR +N+ Y +LRS LP S KK S + R + +IP+L
Sbjct: 71 KKLNHNASERDRRKKINSLYSSLRSLLPPSDH-TKKLSIPSTVSRILKYIPEL 122
Score = 31.2 bits (69), Expect(2) = 7e-06
Identities = 18/69 (26%), Positives = 35/69 (50%)
Frame = +3
Query: 429 ICINEVKRGQLILQICHQRNKVDFFSEFLDKLESQGMEVLNASVLDPSDYRSSRHIHIQM 608
I +E+ ++++QI + SE + +LE +G+ +LNA+ + + R +H Q
Sbjct: 159 ISTSELGDKEIVIQISTLKINKGSISEAISQLEDEGLVLLNATSFETFEDRVFYTLHFQF 218
Query: 609 EVLNASVLD 635
E L + D
Sbjct: 219 EKLPEMMKD 227
>gb|AAG51686.1|AC016972_5 hypothetical protein; 62064-61297 [Arabidopsis thaliana]
Length = 255
Score = 44.3 bits (103), Expect(2) = 1e-05
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 30/83 (36%)
Frame = +1
Query: 187 KKMDHNAKERARRTHLNTAYLALRSSLPESHKPN-------------------------- 288
KK DHNAKER RR L+ +YL L + LP+ +
Sbjct: 61 KKQDHNAKERLRRMRLHASYLTLGTLLPDHSSSSSKVLFSLLLLQVRYVLLVVELYITFL 120
Query: 289 ----KKWSASYLIDRAVDHIPQL 345
KKWSA +ID + +IP+L
Sbjct: 121 ADWQKKWSAPSIIDNVITYIPKL 143
Score = 31.6 bits (70), Expect(2) = 1e-05
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +3
Query: 456 QLILQICHQRNKVDFFSEFLDKLESQGMEVLNAS 557
+ ++QIC ++ D FS L +E QG+ VL+AS
Sbjct: 181 EAVVQICLKKENEDEFSNLLHVMEVQGLSVLSAS 214