BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00002116
         (1397 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop...   277   7e-72
ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citr...   276   1e-71
ref|XP_006294745.1| hypothetical protein CARUB_v10023790mg [Caps...   267   9e-69
gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]    265   3e-68
ref|NP_001050221.1| Os03g0376600 [Oryza sativa Japonica Group] g...   265   3e-68
gb|EAY90218.1| hypothetical protein OsI_11785 [Oryza sativa Indi...   265   4e-68
ref|XP_006410902.1| hypothetical protein EUTSA_v10017023mg [Eutr...   264   6e-68
ref|XP_002465205.1| hypothetical protein SORBIDRAFT_01g034120 [S...   264   8e-68
gb|ACR36437.1| unknown [Zea mays]                                     264   8e-68
ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis th...   263   1e-67
tpg|DAA45554.1| TPA: ribonucleoprotein A [Zea mays]                   263   1e-67
ref|NP_001148607.1| ribonucleoprotein A precursor [Zea mays] gi|...   263   1e-67
ref|XP_006650133.1| PREDICTED: ribonucleoprotein At2g37220, chlo...   262   2e-67
ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arab...   262   2e-67
ref|XP_004984246.1| PREDICTED: ribonucleoprotein At2g37220, chlo...   261   5e-67
ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   259   1e-66
gb|EMJ06843.1| hypothetical protein PRUPE_ppa009295mg [Prunus pe...   259   2e-66
ref|XP_004304439.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor...   257   9e-66
sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A,...   256   1e-65
ref|XP_006363666.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor...   256   2e-65

>ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus] gi|449483348|ref|XP_004156563.1| PREDICTED: 29
           kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 278

 Score =  277 bits (709), Expect = 7e-72
 Identities = 144/226 (63%), Positives = 165/226 (73%)
 Frame = +1

Query: 229 SSRFVRNVAXXXXXXXXXXXXXXXXXXXXXNVEETEFSPDLKLFVGNLPFSVDSAQLAGL 408
           SSRFVRNVA                       +++ ++PDLKLFVGNLPF+VDSAQLAGL
Sbjct: 60  SSRFVRNVAVSSDYGQEEGTLEVDG-------DDSSYAPDLKLFVGNLPFTVDSAQLAGL 112

Query: 409 FEGAGTVEMVEVIYDKATGRSRGFGFVTMSSXXXXXXXXQQFNGYILDGRTLRVNAGPPP 588
           FE AG VE VEVIYDK TGRSRGFGFVTMS+        QQFNGY LDGR LRVN GPPP
Sbjct: 113 FESAGQVERVEVIYDKTTGRSRGFGFVTMSTVGEVEAAAQQFNGYELDGRLLRVNYGPPP 172

Query: 589 PRREGFAPRTPXXXXXXXXXXRVHVGNLSWGVDDLSLKGLFSDHGNVVEAKVIYDRESGR 768
           P+R+  + R            RVHV NL+WGVDDL+L+ LF + GNV+EAKV+YDR+SG+
Sbjct: 173 PKRDDSSFRGSRNASRFDNRNRVHVSNLAWGVDDLTLENLFREKGNVLEAKVVYDRDSGK 232

Query: 769 SRGFGFVTFNTAEEVDNAIQSLDGADLDGRPIRVTMAEARPPRRQF 906
           SRGFGFVT+N+AEEV+ AIQSLDG DLDGRPIRVT AEARPPRRQF
Sbjct: 233 SRGFGFVTYNSAEEVNEAIQSLDGVDLDGRPIRVTQAEARPPRRQF 278


>ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
           gi|568855826|ref|XP_006481497.1| PREDICTED:
           ribonucleoprotein At2g37220, chloroplastic-like [Citrus
           sinensis] gi|557530828|gb|ESR42011.1| hypothetical
           protein CICLE_v10012331mg [Citrus clementina]
          Length = 282

 Score =  276 bits (707), Expect = 1e-71
 Identities = 149/228 (65%), Positives = 167/228 (73%), Gaps = 3/228 (1%)
 Frame = +1

Query: 232 SRFVRNVAXXXXXXXXXXXXXXXXXXXXXNVEETEFSPDLKLFVGNLPFSVDSAQLAGLF 411
           SRFVRNVA                     + + + FSPDLKLFVGNLPFSVDSAQLAGLF
Sbjct: 63  SRFVRNVAVSSEFDQEEDLLS--------DEDGSNFSPDLKLFVGNLPFSVDSAQLAGLF 114

Query: 412 EGAGTVEMVEVIYDKATGRSRGFGFVTMSSXXXXXXXXQQFNGYILDGRTLRVNAGPPPP 591
           E AG VEMVEVIYDK TGRSRGFGFVTMSS        QQFNGY L+GR LRVN+GPPPP
Sbjct: 115 ETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVEAAAQQFNGYELEGRPLRVNSGPPPP 174

Query: 592 RREGFAPRTP---XXXXXXXXXXRVHVGNLSWGVDDLSLKGLFSDHGNVVEAKVIYDRES 762
           RRE F+PR P             RV+VGNLSWGVDDL+L+ LF + G V+EAKV+YDRES
Sbjct: 175 RREEFSPRGPRGGGAGAPSSGGNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRES 234

Query: 763 GRSRGFGFVTFNTAEEVDNAIQSLDGADLDGRPIRVTMAEARPPRRQF 906
           GRSRGFGFVT+++AEEVDNAI SL+G DL GR IRV++AEARP RRQF
Sbjct: 235 GRSRGFGFVTYSSAEEVDNAIDSLNGVDLAGRAIRVSVAEARPQRRQF 282


>ref|XP_006294745.1| hypothetical protein CARUB_v10023790mg [Capsella rubella]
           gi|482563453|gb|EOA27643.1| hypothetical protein
           CARUB_v10023790mg [Capsella rubella]
          Length = 284

 Score =  267 bits (682), Expect = 9e-69
 Identities = 145/240 (60%), Positives = 167/240 (69%), Gaps = 9/240 (3%)
 Frame = +1

Query: 214 RFEAISSRFVRNVAXXXXXXXXXXXXXXXXXXXXXNVEETEFSPDLKLFVGNLPFSVDSA 393
           ++ + +SRFVRNVA                       +E  FS DLKLFVGNLPF+VDSA
Sbjct: 51  KWSSPASRFVRNVATSEFEVEEDGFSDDAAP------QEQSFSADLKLFVGNLPFNVDSA 104

Query: 394 QLAGLFEGAGTVEMVEVIYDKATGRSRGFGFVTMSSXXXXXXXXQQFNGYILDGRTLRVN 573
           QLA LFE AG VEMVEVIYDK TGRSRGFGFVTMSS        QQFNGY LDGR LRVN
Sbjct: 105 QLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSASEVEAAAQQFNGYELDGRPLRVN 164

Query: 574 AGPPPPRREGFAPRTP---------XXXXXXXXXXRVHVGNLSWGVDDLSLKGLFSDHGN 726
           AGPPPP+RE    R P                   RV+VGNLSWGVDD++L+ LF++ G 
Sbjct: 165 AGPPPPKREDGFSRGPRSSFGGSGYGGGSGAGSGNRVYVGNLSWGVDDMALESLFAEQGK 224

Query: 727 VVEAKVIYDRESGRSRGFGFVTFNTAEEVDNAIQSLDGADLDGRPIRVTMAEARPPRRQF 906
           VVEA+VIYDR+SGRS+GFGFVT+N+++EV NAI SL+GADLDGR IRV+ AEARPPRRQF
Sbjct: 225 VVEARVIYDRDSGRSKGFGFVTYNSSQEVQNAINSLNGADLDGRQIRVSEAEARPPRRQF 284


>gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]
          Length = 289

 Score =  265 bits (677), Expect = 3e-68
 Identities = 145/244 (59%), Positives = 168/244 (68%), Gaps = 13/244 (5%)
 Frame = +1

Query: 214 RFEAISSRFVRNVAXXXXXXXXXXXXXXXXXXXXXNVEETEFSPDLKLFVGNLPFSVDSA 393
           ++ + +SRFVRNVA                       +E  FS DLKLFVGNLPF+VDSA
Sbjct: 51  KWNSPASRFVRNVAITSEFEVEEDGFADVAPP-----KEQSFSADLKLFVGNLPFNVDSA 105

Query: 394 QLAGLFEGAGTVEMVEVIYDKATGRSRGFGFVTMSSXXXXXXXXQQFNGYILDGRTLRVN 573
           QLA LFE AG VEMVEVIYDK TGRSRGFGFVTMSS        QQFNGY LDGR LRVN
Sbjct: 106 QLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVN 165

Query: 574 AGPPPPRREGFAPRTP-------------XXXXXXXXXXRVHVGNLSWGVDDLSLKGLFS 714
           AGPPPP+RE    R P                       RV+VGNLSWGVDD++L+ LFS
Sbjct: 166 AGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFS 225

Query: 715 DHGNVVEAKVIYDRESGRSRGFGFVTFNTAEEVDNAIQSLDGADLDGRPIRVTMAEARPP 894
           + G VVEA+VIYDR+SGRS+GFGFVT+++++EV NAI+SLDGADLDGR IRV+ AEARPP
Sbjct: 226 EQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPP 285

Query: 895 RRQF 906
           RRQ+
Sbjct: 286 RRQY 289


>ref|NP_001050221.1| Os03g0376600 [Oryza sativa Japonica Group]
           gi|18921322|gb|AAL82527.1|AC084766_13 putative
           ribonucleoprotein [Oryza sativa Japonica Group]
           gi|108708430|gb|ABF96225.1| RNA recognition motif family
           protein, expressed [Oryza sativa Japonica Group]
           gi|113548692|dbj|BAF12135.1| Os03g0376600 [Oryza sativa
           Japonica Group] gi|125586437|gb|EAZ27101.1| hypothetical
           protein OsJ_11032 [Oryza sativa Japonica Group]
           gi|215697052|dbj|BAG91046.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215766568|dbj|BAG98727.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 265

 Score =  265 bits (677), Expect = 3e-68
 Identities = 134/191 (70%), Positives = 156/191 (81%)
 Frame = +1

Query: 334 EFSPDLKLFVGNLPFSVDSAQLAGLFEGAGTVEMVEVIYDKATGRSRGFGFVTMSSXXXX 513
           EFS DL++FVGNLPFSVDSAQLAGLFE AG+VEMVEVIYDK TGRSRGFGFVTMSS    
Sbjct: 81  EFSDDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEV 140

Query: 514 XXXXQQFNGYILDGRTLRVNAGPPPPRREGFAPRTPXXXXXXXXXXRVHVGNLSWGVDDL 693
               +QFNGYILDGR+LRVN+GPPPPR +  + R P          RV+VGNLSWGVD+ 
Sbjct: 141 EAAVEQFNGYILDGRSLRVNSGPPPPREQS-SQRAP-----RGEANRVYVGNLSWGVDNA 194

Query: 694 SLKGLFSDHGNVVEAKVIYDRESGRSRGFGFVTFNTAEEVDNAIQSLDGADLDGRPIRVT 873
           +L  LFS  G V+EAKVIYDRESGRSRGFGFVT+ +AEEV+NA+ +LDGAD+DGR IRVT
Sbjct: 195 ALANLFSGEGEVLEAKVIYDRESGRSRGFGFVTYGSAEEVENAVSNLDGADMDGRQIRVT 254

Query: 874 MAEARPPRRQF 906
           +AE++PPRRQ+
Sbjct: 255 VAESKPPRRQY 265


>gb|EAY90218.1| hypothetical protein OsI_11785 [Oryza sativa Indica Group]
          Length = 265

 Score =  265 bits (676), Expect = 4e-68
 Identities = 134/191 (70%), Positives = 156/191 (81%)
 Frame = +1

Query: 334 EFSPDLKLFVGNLPFSVDSAQLAGLFEGAGTVEMVEVIYDKATGRSRGFGFVTMSSXXXX 513
           EFS DL++FVGNLPFSVDSAQLAGLFE AG+VEMVEVIYDK TGRSRGFGFVTMSS    
Sbjct: 81  EFSDDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEV 140

Query: 514 XXXXQQFNGYILDGRTLRVNAGPPPPRREGFAPRTPXXXXXXXXXXRVHVGNLSWGVDDL 693
               +QFNGYILDGR+LRVN+GPPPPR +  + R P          RV+VGNLSWGVD+ 
Sbjct: 141 EAAVEQFNGYILDGRSLRVNSGPPPPREQS-SRRAP-----RGEANRVYVGNLSWGVDNA 194

Query: 694 SLKGLFSDHGNVVEAKVIYDRESGRSRGFGFVTFNTAEEVDNAIQSLDGADLDGRPIRVT 873
           +L  LFS  G V+EAKVIYDRESGRSRGFGFVT+ +AEEV+NA+ +LDGAD+DGR IRVT
Sbjct: 195 ALANLFSGEGEVLEAKVIYDRESGRSRGFGFVTYGSAEEVENAVSNLDGADMDGRQIRVT 254

Query: 874 MAEARPPRRQF 906
           +AE++PPRRQ+
Sbjct: 255 VAESKPPRRQY 265


>ref|XP_006410902.1| hypothetical protein EUTSA_v10017023mg [Eutrema salsugineum]
           gi|557112071|gb|ESQ52355.1| hypothetical protein
           EUTSA_v10017023mg [Eutrema salsugineum]
          Length = 292

 Score =  264 bits (675), Expect = 6e-68
 Identities = 144/242 (59%), Positives = 166/242 (68%), Gaps = 11/242 (4%)
 Frame = +1

Query: 214 RFEAISSRFVRNVAXXXXXXXXXXXXXXXXXXXXXNVEETEFSPDLKLFVGNLPFSVDSA 393
           ++ + +SRFVRNVA                        E  FS DLKLFVGNLPF VDSA
Sbjct: 55  KWSSAASRFVRNVAVTEDFEVEEDGIFADDAAP----REQSFSADLKLFVGNLPFDVDSA 110

Query: 394 QLAGLFEGAGTVEMVEVIYDKATGRSRGFGFVTMSSXXXXXXXXQQFNGYILDGRTLRVN 573
           +LA LFE AGTVE+VEVIYDK TGRSRGFGFVTMSS        QQFNGY LDGR LRVN
Sbjct: 111 RLAQLFESAGTVEIVEVIYDKITGRSRGFGFVTMSSASEVEAAAQQFNGYELDGRPLRVN 170

Query: 574 AGPPPPRREGFAPRTP-----------XXXXXXXXXXRVHVGNLSWGVDDLSLKGLFSDH 720
           AGPPPP+RE    R P                     RV+VGNLSWGVDD++L+ LF + 
Sbjct: 171 AGPPPPKREDGFSRGPRSSFGSSGSGYGGGSGAGSGNRVYVGNLSWGVDDMALENLFGEQ 230

Query: 721 GNVVEAKVIYDRESGRSRGFGFVTFNTAEEVDNAIQSLDGADLDGRPIRVTMAEARPPRR 900
           G VVEA+VIYDR+SGRS+GFGFVT+N+A+EV NAI++L+GADLDGR IRV+ AEARPPRR
Sbjct: 231 GKVVEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRTLNGADLDGRQIRVSEAEARPPRR 290

Query: 901 QF 906
           QF
Sbjct: 291 QF 292


>ref|XP_002465205.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
           gi|241919059|gb|EER92203.1| hypothetical protein
           SORBIDRAFT_01g034120 [Sorghum bicolor]
          Length = 262

 Score =  264 bits (674), Expect = 8e-68
 Identities = 133/193 (68%), Positives = 158/193 (81%)
 Frame = +1

Query: 328 ETEFSPDLKLFVGNLPFSVDSAQLAGLFEGAGTVEMVEVIYDKATGRSRGFGFVTMSSXX 507
           E EFS DL++FVGNLPFSVDSAQLAGLFE AG+VEMVEVIYDK TGRSRGFGFVTMSS  
Sbjct: 76  EEEFSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVQ 135

Query: 508 XXXXXXQQFNGYILDGRTLRVNAGPPPPRREGFAPRTPXXXXXXXXXXRVHVGNLSWGVD 687
                 +QFNGY+LDGR+LRVN+GPPPP R+  + R P          RV+VGNLSWGVD
Sbjct: 136 EVEAAVEQFNGYVLDGRSLRVNSGPPPP-RDPSSQRGP-----RGDANRVYVGNLSWGVD 189

Query: 688 DLSLKGLFSDHGNVVEAKVIYDRESGRSRGFGFVTFNTAEEVDNAIQSLDGADLDGRPIR 867
           + +L  LFS+ G V+EA+++YDRESGRSRGFGFVT+ +AEEV+NAI +LDG+DLDGR IR
Sbjct: 190 NSALANLFSEQGEVLEARIVYDRESGRSRGFGFVTYGSAEEVENAISNLDGSDLDGRQIR 249

Query: 868 VTMAEARPPRRQF 906
           VT+AE++PPRRQF
Sbjct: 250 VTVAESKPPRRQF 262


>gb|ACR36437.1| unknown [Zea mays]
          Length = 262

 Score =  264 bits (674), Expect = 8e-68
 Identities = 133/192 (69%), Positives = 157/192 (81%), Gaps = 1/192 (0%)
 Frame = +1

Query: 334 EFSPDLKLFVGNLPFSVDSAQLAGLFEGAGTVEMVEVIYDKATGRSRGFGFVTMSSXXXX 513
           EFS DL++FVGNLPFSVDSAQLAGLFE AG+VEMVEVIYDK TGRSRGFGFVTMSS    
Sbjct: 76  EFSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEV 135

Query: 514 XXXXQQFNGYILDGRTLRVNAGPPPPR-REGFAPRTPXXXXXXXXXXRVHVGNLSWGVDD 690
                QFNGY+LDGR+LRVN+GPPPPR R   +P+ P          RV+VGNLSWGVD+
Sbjct: 136 EVAVDQFNGYVLDGRSLRVNSGPPPPRDRSSRSPQRP-----RGDANRVYVGNLSWGVDN 190

Query: 691 LSLKGLFSDHGNVVEAKVIYDRESGRSRGFGFVTFNTAEEVDNAIQSLDGADLDGRPIRV 870
            +L  LFS+ G V+EA++IYDRESGRSRGFGFVT+ +AEEV+NAI +LDGADLDGR IRV
Sbjct: 191 SALANLFSEQGEVLEARIIYDRESGRSRGFGFVTYGSAEEVENAISNLDGADLDGRQIRV 250

Query: 871 TMAEARPPRRQF 906
           T+AE++PPR+Q+
Sbjct: 251 TVAESKPPRQQY 262


>ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis thaliana]
           gi|12230623|sp|Q9ZUU4.1|ROC1_ARATH RecName:
           Full=Ribonucleoprotein At2g37220, chloroplastic; Flags:
           Precursor gi|13877809|gb|AAK43982.1|AF370167_1 putative
           RNA-binding protein [Arabidopsis thaliana]
           gi|4056477|gb|AAC98043.1| putative RNA-binding protein
           [Arabidopsis thaliana] gi|15081717|gb|AAK82513.1|
           At2g37220/F3G5.1 [Arabidopsis thaliana]
           gi|16323482|gb|AAL15235.1| putative RNA-binding protein
           [Arabidopsis thaliana] gi|20197716|gb|AAM15222.1|
           putative RNA-binding protein [Arabidopsis thaliana]
           gi|330254275|gb|AEC09369.1| chloroplast RNA binding
           protein [Arabidopsis thaliana]
          Length = 289

 Score =  263 bits (673), Expect = 1e-67
 Identities = 144/244 (59%), Positives = 167/244 (68%), Gaps = 13/244 (5%)
 Frame = +1

Query: 214 RFEAISSRFVRNVAXXXXXXXXXXXXXXXXXXXXXNVEETEFSPDLKLFVGNLPFSVDSA 393
           ++ + +SRF RNVA                       +E  FS DLKLFVGNLPF+VDSA
Sbjct: 51  KWNSPASRFARNVAITSEFEVEEDGFADVAPP-----KEQSFSADLKLFVGNLPFNVDSA 105

Query: 394 QLAGLFEGAGTVEMVEVIYDKATGRSRGFGFVTMSSXXXXXXXXQQFNGYILDGRTLRVN 573
           QLA LFE AG VEMVEVIYDK TGRSRGFGFVTMSS        QQFNGY LDGR LRVN
Sbjct: 106 QLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVN 165

Query: 574 AGPPPPRREGFAPRTP-------------XXXXXXXXXXRVHVGNLSWGVDDLSLKGLFS 714
           AGPPPP+RE    R P                       RV+VGNLSWGVDD++L+ LFS
Sbjct: 166 AGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFS 225

Query: 715 DHGNVVEAKVIYDRESGRSRGFGFVTFNTAEEVDNAIQSLDGADLDGRPIRVTMAEARPP 894
           + G VVEA+VIYDR+SGRS+GFGFVT+++++EV NAI+SLDGADLDGR IRV+ AEARPP
Sbjct: 226 EQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPP 285

Query: 895 RRQF 906
           RRQ+
Sbjct: 286 RRQY 289


>tpg|DAA45554.1| TPA: ribonucleoprotein A [Zea mays]
          Length = 262

 Score =  263 bits (673), Expect = 1e-67
 Identities = 133/192 (69%), Positives = 157/192 (81%), Gaps = 1/192 (0%)
 Frame = +1

Query: 334 EFSPDLKLFVGNLPFSVDSAQLAGLFEGAGTVEMVEVIYDKATGRSRGFGFVTMSSXXXX 513
           EFS DL++FVGNLPFSVDSAQLAGLFE AG+VEMVEVIYDK TGRSRGFGFVTMSS    
Sbjct: 76  EFSDDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEV 135

Query: 514 XXXXQQFNGYILDGRTLRVNAGPPPPR-REGFAPRTPXXXXXXXXXXRVHVGNLSWGVDD 690
                QFNGY+LDGR+LRVN+GPPPPR R   +P+ P          RV+VGNLSWGVD+
Sbjct: 136 EVAVDQFNGYVLDGRSLRVNSGPPPPRDRSSPSPQRP-----RGDANRVYVGNLSWGVDN 190

Query: 691 LSLKGLFSDHGNVVEAKVIYDRESGRSRGFGFVTFNTAEEVDNAIQSLDGADLDGRPIRV 870
            +L  LFS+ G V+EA++IYDRESGRSRGFGFVT+ +AEEV+NAI +LDGADLDGR IRV
Sbjct: 191 SALANLFSEQGEVLEARIIYDRESGRSRGFGFVTYGSAEEVENAISNLDGADLDGRQIRV 250

Query: 871 TMAEARPPRRQF 906
           T+AE++PPR+Q+
Sbjct: 251 TVAESKPPRQQY 262


>ref|NP_001148607.1| ribonucleoprotein A precursor [Zea mays]
           gi|195620768|gb|ACG32214.1| ribonucleoprotein A [Zea
           mays]
          Length = 264

 Score =  263 bits (673), Expect = 1e-67
 Identities = 133/192 (69%), Positives = 157/192 (81%), Gaps = 1/192 (0%)
 Frame = +1

Query: 334 EFSPDLKLFVGNLPFSVDSAQLAGLFEGAGTVEMVEVIYDKATGRSRGFGFVTMSSXXXX 513
           EFS DL++FVGNLPFSVDSAQLAGLFE AG+VEMVEVIYDK TGRSRGFGFVTMSS    
Sbjct: 78  EFSDDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSVEEV 137

Query: 514 XXXXQQFNGYILDGRTLRVNAGPPPPR-REGFAPRTPXXXXXXXXXXRVHVGNLSWGVDD 690
                QFNGY+LDGR+LRVN+GPPPPR R   +P+ P          RV+VGNLSWGVD+
Sbjct: 138 EVAVDQFNGYVLDGRSLRVNSGPPPPRDRSSPSPQRP-----RGDANRVYVGNLSWGVDN 192

Query: 691 LSLKGLFSDHGNVVEAKVIYDRESGRSRGFGFVTFNTAEEVDNAIQSLDGADLDGRPIRV 870
            +L  LFS+ G V+EA++IYDRESGRSRGFGFVT+ +AEEV+NAI +LDGADLDGR IRV
Sbjct: 193 SALANLFSEQGEVLEARIIYDRESGRSRGFGFVTYGSAEEVENAISNLDGADLDGRQIRV 252

Query: 871 TMAEARPPRRQF 906
           T+AE++PPR+Q+
Sbjct: 253 TVAESKPPRQQY 264


>ref|XP_006650133.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like [Oryza
           brachyantha]
          Length = 262

 Score =  262 bits (670), Expect = 2e-67
 Identities = 132/193 (68%), Positives = 156/193 (80%)
 Frame = +1

Query: 328 ETEFSPDLKLFVGNLPFSVDSAQLAGLFEGAGTVEMVEVIYDKATGRSRGFGFVTMSSXX 507
           E EFS DL++FVGNLPFSVDSAQLAGLFE AG+VEMVEVIYDK TGRSRGFGFVTMS+  
Sbjct: 76  EEEFSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSTVE 135

Query: 508 XXXXXXQQFNGYILDGRTLRVNAGPPPPRREGFAPRTPXXXXXXXXXXRVHVGNLSWGVD 687
                 +QFNG+ILDGR+LRVN+GPPPPR +  +PR P          RV+VGNLSWGVD
Sbjct: 136 EVEAAVEQFNGHILDGRSLRVNSGPPPPREQS-SPRAP-----RGEANRVYVGNLSWGVD 189

Query: 688 DLSLKGLFSDHGNVVEAKVIYDRESGRSRGFGFVTFNTAEEVDNAIQSLDGADLDGRPIR 867
           + +L  LFS  G V+EA++IYDRESGRSRGFGFVT+ +AEEV+NA+ +LDG DLDGR IR
Sbjct: 190 NAALANLFSGEGEVLEARIIYDRESGRSRGFGFVTYGSAEEVENAVSNLDGTDLDGRQIR 249

Query: 868 VTMAEARPPRRQF 906
           VT+AE+R PRRQ+
Sbjct: 250 VTVAESRQPRRQY 262


>ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp.
           lyrata] gi|297327336|gb|EFH57756.1| hypothetical protein
           ARALYDRAFT_482714 [Arabidopsis lyrata subsp. lyrata]
          Length = 289

 Score =  262 bits (670), Expect = 2e-67
 Identities = 143/244 (58%), Positives = 166/244 (68%), Gaps = 13/244 (5%)
 Frame = +1

Query: 214 RFEAISSRFVRNVAXXXXXXXXXXXXXXXXXXXXXNVEETEFSPDLKLFVGNLPFSVDSA 393
           ++ + +SRFVRNVA                       ++  FS DLKLFVGNLPF+VDSA
Sbjct: 51  KWNSPASRFVRNVAITSEFEVEEDGFADDAAP-----QQQSFSADLKLFVGNLPFNVDSA 105

Query: 394 QLAGLFEGAGTVEMVEVIYDKATGRSRGFGFVTMSSXXXXXXXXQQFNGYILDGRTLRVN 573
           QLA LFE AG VEMVEVIYDK TGRSRGFGFVTMSS         QFNGY LDGR LRVN
Sbjct: 106 QLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSVSEVEAAANQFNGYELDGRPLRVN 165

Query: 574 AGPPPPRREGFAPRTP-------------XXXXXXXXXXRVHVGNLSWGVDDLSLKGLFS 714
           AGPPPP+RE    R P                       RV+VGNLSWGVDD++L+ LF+
Sbjct: 166 AGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFA 225

Query: 715 DHGNVVEAKVIYDRESGRSRGFGFVTFNTAEEVDNAIQSLDGADLDGRPIRVTMAEARPP 894
           + G VVEA+VIYDR+SGRS+GFGFVT+N+++EV NAI SL+GADLDGR IRV+ AEARPP
Sbjct: 226 EQGKVVEARVIYDRDSGRSKGFGFVTYNSSQEVQNAINSLNGADLDGRQIRVSEAEARPP 285

Query: 895 RRQF 906
           RRQF
Sbjct: 286 RRQF 289


>ref|XP_004984246.1| PREDICTED: ribonucleoprotein At2g37220, chloroplastic-like [Setaria
           italica]
          Length = 262

 Score =  261 bits (667), Expect = 5e-67
 Identities = 132/194 (68%), Positives = 157/194 (80%)
 Frame = +1

Query: 325 EETEFSPDLKLFVGNLPFSVDSAQLAGLFEGAGTVEMVEVIYDKATGRSRGFGFVTMSSX 504
           E+ EFS DL++FVGNLPFSVDSAQLAGLFE AG+VEMVEVIYDK TGRSRGFGFVTMSS 
Sbjct: 75  EDEEFSADLRIFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSV 134

Query: 505 XXXXXXXQQFNGYILDGRTLRVNAGPPPPRREGFAPRTPXXXXXXXXXXRVHVGNLSWGV 684
                  +QFNGY+LDGR+L+VN+GP PPR +  +PR P          RV+VGNLSWGV
Sbjct: 135 EEVEVAVEQFNGYVLDGRSLKVNSGPAPPREQS-SPRGP-----RGEANRVYVGNLSWGV 188

Query: 685 DDLSLKGLFSDHGNVVEAKVIYDRESGRSRGFGFVTFNTAEEVDNAIQSLDGADLDGRPI 864
           D+ +L  LF+  G V+EA+VIYDRESGRSRGFGFVT+ ++EEV+NAI +LDGADLDGR I
Sbjct: 189 DNSALANLFNKQGEVLEARVIYDRESGRSRGFGFVTYGSSEEVENAISNLDGADLDGRQI 248

Query: 865 RVTMAEARPPRRQF 906
           RVT+AE+RPPR Q+
Sbjct: 249 RVTVAESRPPRGQY 262


>ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis
           vinifera]
          Length = 288

 Score =  259 bits (663), Expect = 1e-66
 Identities = 147/244 (60%), Positives = 164/244 (67%), Gaps = 14/244 (5%)
 Frame = +1

Query: 217 FEAISSRFVRNVAXXXXXXXXXXXXXXXXXXXXXNVEETEFSPDLKLFVGNLPFSVDSAQ 396
           F  +SSRFVRNVA                        E  FSPDLKLFVGNLPF+VDSA 
Sbjct: 54  FLTLSSRFVRNVAVSSDYEQDEDVLSDEG--------EPSFSPDLKLFVGNLPFNVDSAG 105

Query: 397 LAGLFEGAGTVEMVEVIYDKATGRSRGFGFVTMSSXXXXXXXXQQFNGYILDGRTLRVNA 576
           LAGLFE AG VEMVEVIYDK TGRSRGFGFVTMS+        QQFNGY L+GR LRVN+
Sbjct: 106 LAGLFEQAGNVEMVEVIYDKITGRSRGFGFVTMSTVEEVEAAAQQFNGYELEGRQLRVNS 165

Query: 577 GPPPPRR--------------EGFAPRTPXXXXXXXXXXRVHVGNLSWGVDDLSLKGLFS 714
           GPPP RR              E    R P          R++VGNLSWGVDDL+L+ LFS
Sbjct: 166 GPPPARRENSNFRGENSNFRGENTNFRGPRGGANLNSTNRIYVGNLSWGVDDLALETLFS 225

Query: 715 DHGNVVEAKVIYDRESGRSRGFGFVTFNTAEEVDNAIQSLDGADLDGRPIRVTMAEARPP 894
           + G V EA+VIYDRE+GRSRGFGFVT+N+AEEV+ AI+SLDG DL+GR IRVTMAEAR P
Sbjct: 226 EQGKVTEARVIYDRETGRSRGFGFVTYNSAEEVNRAIESLDGVDLNGRSIRVTMAEAR-P 284

Query: 895 RRQF 906
           RRQF
Sbjct: 285 RRQF 288


>gb|EMJ06843.1| hypothetical protein PRUPE_ppa009295mg [Prunus persica]
          Length = 298

 Score =  259 bits (662), Expect = 2e-66
 Identities = 141/231 (61%), Positives = 164/231 (70%)
 Frame = +1

Query: 214 RFEAISSRFVRNVAXXXXXXXXXXXXXXXXXXXXXNVEETEFSPDLKLFVGNLPFSVDSA 393
           RF++ SSRFVRNVA                        E  F+PDLKLFVGNLPFSVDSA
Sbjct: 78  RFQSASSRFVRNVAVSSEFEQDEEVLSDDG--------EASFAPDLKLFVGNLPFSVDSA 129

Query: 394 QLAGLFEGAGTVEMVEVIYDKATGRSRGFGFVTMSSXXXXXXXXQQFNGYILDGRTLRVN 573
           QLAGLFE AG VEMVEVIYDK TGRSRGFGFVTMSS        +Q NGY LDGR LRVN
Sbjct: 130 QLAGLFESAGNVEMVEVIYDKTTGRSRGFGFVTMSSVQEAEGAARQLNGYELDGRALRVN 189

Query: 574 AGPPPPRREGFAPRTPXXXXXXXXXXRVHVGNLSWGVDDLSLKGLFSDHGNVVEAKVIYD 753
            GPPPPR E  + R            R++VGNL+WGVD+L+L+ LFS+ G V+EAKV+YD
Sbjct: 190 YGPPPPRSED-SFRGARGGGGSDSSNRLYVGNLAWGVDNLALENLFSEQGKVLEAKVVYD 248

Query: 754 RESGRSRGFGFVTFNTAEEVDNAIQSLDGADLDGRPIRVTMAEARPPRRQF 906
           R+SGRSRGFGFVT+ TA+E+++A++SLDG DL+GR IRVT AE R PRRQF
Sbjct: 249 RDSGRSRGFGFVTYGTADEMNSAMESLDGVDLNGRSIRVTAAEPR-PRRQF 298


>ref|XP_004304439.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Fragaria
           vesca subsp. vesca]
          Length = 277

 Score =  257 bits (656), Expect = 9e-66
 Identities = 133/200 (66%), Positives = 154/200 (77%), Gaps = 7/200 (3%)
 Frame = +1

Query: 328 ETEFSPDLKLFVGNLPFSVDSAQLAGLFEGAGTVEMVEVIYDKATGRSRGFGFVTMSSXX 507
           E  FSPDLKLFVGNLPF+VDSAQLA LFEGAG VEMVEVIYDK TGRSRGFGFVTMSS  
Sbjct: 80  EPNFSPDLKLFVGNLPFTVDSAQLAELFEGAGNVEMVEVIYDKTTGRSRGFGFVTMSSAQ 139

Query: 508 XXXXXXQQFNGYILDGRTLRVNAGPPPPRRE-------GFAPRTPXXXXXXXXXXRVHVG 666
                 +QFNGY LDGR LRVN GPPPPR E       G +PR            R++VG
Sbjct: 140 EVEAAARQFNGYELDGRALRVNYGPPPPRTEDSFRGARGGSPR--GGGGYGDSSNRLYVG 197

Query: 667 NLSWGVDDLSLKGLFSDHGNVVEAKVIYDRESGRSRGFGFVTFNTAEEVDNAIQSLDGAD 846
           NL+WGVD+L+L+ LF++ G V+EAKV++DR+SGRSRGFGFVT+ +AEE+++AI+SLDG D
Sbjct: 198 NLAWGVDNLALENLFNEQGKVLEAKVVFDRDSGRSRGFGFVTYGSAEEMNSAIESLDGVD 257

Query: 847 LDGRPIRVTMAEARPPRRQF 906
           L GR IRVT AE RPPRRQF
Sbjct: 258 LGGRSIRVTAAEPRPPRRQF 277


>sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
           Full=CP29A; Flags: Precursor gi|19754|emb|CAA43427.1|
           29kD A ribonucleoprotein [Nicotiana sylvestris]
          Length = 273

 Score =  256 bits (655), Expect = 1e-65
 Identities = 133/195 (68%), Positives = 152/195 (77%), Gaps = 1/195 (0%)
 Frame = +1

Query: 325 EETEFSPDLKLFVGNLPFSVDSAQLAGLFEGAGTVEMVEVIYDKATGRSRGFGFVTMSSX 504
           EE  FSPDLK+FVGNLPFS DSA LA LFE AG VEMVEVIYDK TGRSRGFGFVTMSS 
Sbjct: 79  EERNFSPDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSK 138

Query: 505 XXXXXXXQQFNGYILDGRTLRVNAGPPPPRREGFAPR-TPXXXXXXXXXXRVHVGNLSWG 681
                  QQFNGY LDGR LRVN+GPPP +RE  + R             RV+VGNL+WG
Sbjct: 139 EEVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRGGSRGGGSFDSSNRVYVGNLAWG 198

Query: 682 VDDLSLKGLFSDHGNVVEAKVIYDRESGRSRGFGFVTFNTAEEVDNAIQSLDGADLDGRP 861
           VD  +L+ LFS+ G VV+AKV+YDR+SGRSRGFGFVT+++AEEV+NAI+SLDG DL+GR 
Sbjct: 199 VDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVNNAIESLDGVDLNGRA 258

Query: 862 IRVTMAEARPPRRQF 906
           IRV+ AEARPPRRQF
Sbjct: 259 IRVSPAEARPPRRQF 273


>ref|XP_006363666.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like isoform
           X2 [Solanum tuberosum]
          Length = 291

 Score =  256 bits (653), Expect = 2e-65
 Identities = 148/246 (60%), Positives = 164/246 (66%), Gaps = 14/246 (5%)
 Frame = +1

Query: 211 KRFEAIS--SRFVRNVAXXXXXXXXXXXXXXXXXXXXXNVEETEFSPDLKLFVGNLPFSV 384
           K FE+ S  SRFVRNVA                       EE  FSPDLKLFVGNLPFSV
Sbjct: 54  KPFESSSFGSRFVRNVALSEFDQLEDDVGEVE--------EEPNFSPDLKLFVGNLPFSV 105

Query: 385 DSAQLAGLFEGAGTVEMVEVIYDKATGRSRGFGFVTMSSXXXXXXXXQQFNGYILDGRTL 564
           DSA LA LFE AG VEMVEVIYDK TGRSRGFGFVTMSS        QQFNGY +DGR L
Sbjct: 106 DSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKAEVEAAEQQFNGYEIDGRAL 165

Query: 565 RVNAGPPPPRRE-----GFAPRT-------PXXXXXXXXXXRVHVGNLSWGVDDLSLKGL 708
           RVN+GP P +RE     G   R+                  RV+VGNLSWGVDDLSL+ L
Sbjct: 166 RVNSGPAPEKRENSFGGGRGGRSENSSYGGARGGRNFDSSNRVYVGNLSWGVDDLSLREL 225

Query: 709 FSDHGNVVEAKVIYDRESGRSRGFGFVTFNTAEEVDNAIQSLDGADLDGRPIRVTMAEAR 888
           FSD G VV+ KV+YDR+SGRSRGFGFVTF++A+EV+ AI SL+G DLDGR IRV+ AE R
Sbjct: 226 FSDQGKVVDCKVVYDRDSGRSRGFGFVTFSSAQEVNKAIDSLNGFDLDGRSIRVSAAEER 285

Query: 889 PPRRQF 906
           PPRRQF
Sbjct: 286 PPRRQF 291