BLASTX nr result
ID: Rheum21_contig00002074
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00002074
(1655 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 276 2e-71
ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop... 272 3e-70
ref|XP_006294745.1| hypothetical protein CARUB_v10023790mg [Caps... 270 1e-69
ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis th... 270 2e-69
gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana] 270 2e-69
ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arab... 268 4e-69
sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A,... 267 1e-68
ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citr... 266 3e-68
ref|XP_006363665.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor... 265 6e-68
ref|XP_006410902.1| hypothetical protein EUTSA_v10017023mg [Eutr... 265 6e-68
gb|EMJ06843.1| hypothetical protein PRUPE_ppa009295mg [Prunus pe... 264 7e-68
ref|XP_004304439.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 263 2e-67
sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, c... 261 5e-67
ref|XP_006363666.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor... 261 8e-67
ref|NP_001050221.1| Os03g0376600 [Oryza sativa Japonica Group] g... 258 4e-66
gb|EAY90218.1| hypothetical protein OsI_11785 [Oryza sativa Indi... 258 5e-66
gb|EXC16209.1| 29 kDa ribonucleoprotein B [Morus notabilis] 257 9e-66
ref|XP_002465205.1| hypothetical protein SORBIDRAFT_01g034120 [S... 256 2e-65
ref|XP_006846809.1| hypothetical protein AMTR_s00148p00072380 [A... 256 2e-65
tpg|DAA45554.1| TPA: ribonucleoprotein A [Zea mays] 255 3e-65
>ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis
vinifera]
Length = 288
Score = 276 bits (706), Expect = 2e-71
Identities = 154/249 (61%), Positives = 176/249 (70%), Gaps = 2/249 (0%)
Frame = -1
Query: 1385 PSVKRFSALSSKFVRNXXXXXXXXXXXXXXVF-GDRGFSPDVKLFVGNLPFSADSAQLAG 1209
PS + F LSS+FVRN G+ FSPD+KLFVGNLPF+ DSA LAG
Sbjct: 49 PSSRGFLTLSSRFVRNVAVSSDYEQDEDVLSDEGEPSFSPDLKLFVGNLPFNVDSAGLAG 108
Query: 1208 LFETAGNVEMVEVIYDKATGRSRGFGFVTMSSVXXXXXXAQQFNGYDLDGRTLRVNAGPP 1029
LFE AGNVEMVEVIYDK TGRSRGFGFVTMS+V AQQFNGY+L+GR LRVN+GPP
Sbjct: 109 LFEQAGNVEMVEVIYDKITGRSRGFGFVTMSTVEEVEAAAQQFNGYELEGRQLRVNSGPP 168
Query: 1028 PPRREGS-FQREGSFPPPRREGSFQRENXXXXXXXXXXXXXXSHRIHVGNLSWGVDDLAL 852
P RRE S F+ E S +F+ EN ++RI+VGNLSWGVDDLAL
Sbjct: 169 PARRENSNFRGENS--------NFRGENTNFRGPRGGANLNSTNRIYVGNLSWGVDDLAL 220
Query: 851 RNMFSDHGDVVEAKVIYDRESGRSRGFGFVTYNTGEEVNTAIDSLDGADLDGRQIRVTQA 672
+FS+ G V EA+VIYDRE+GRSRGFGFVTYN+ EEVN AI+SLDG DL+GR IRVT A
Sbjct: 221 ETLFSEQGKVTEARVIYDRETGRSRGFGFVTYNSAEEVNRAIESLDGVDLNGRSIRVTMA 280
Query: 671 EARPPRRQF 645
EAR PRRQF
Sbjct: 281 EAR-PRRQF 288
>ref|XP_004137828.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus] gi|449483348|ref|XP_004156563.1| PREDICTED: 29
kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 278
Score = 272 bits (696), Expect = 3e-70
Identities = 147/249 (59%), Positives = 168/249 (67%), Gaps = 2/249 (0%)
Frame = -1
Query: 1385 PSVKRFSALSSKFVRNXXXXXXXXXXXXXXVFG--DRGFSPDVKLFVGNLPFSADSAQLA 1212
PS + SS+FVRN D ++PD+KLFVGNLPF+ DSAQLA
Sbjct: 51 PSHRVSPPFSSRFVRNVAVSSDYGQEEGTLEVDGDDSSYAPDLKLFVGNLPFTVDSAQLA 110
Query: 1211 GLFETAGNVEMVEVIYDKATGRSRGFGFVTMSSVXXXXXXAQQFNGYDLDGRTLRVNAGP 1032
GLFE+AG VE VEVIYDK TGRSRGFGFVTMS+V AQQFNGY+LDGR LRVN GP
Sbjct: 111 GLFESAGQVERVEVIYDKTTGRSRGFGFVTMSTVGEVEAAAQQFNGYELDGRLLRVNYGP 170
Query: 1031 PPPRREGSFQREGSFPPPRREGSFQRENXXXXXXXXXXXXXXSHRIHVGNLSWGVDDLAL 852
PPP+R+ S SF R F N R+HV NL+WGVDDL L
Sbjct: 171 PPPKRDDS-----SFRGSRNASRFDNRN----------------RVHVSNLAWGVDDLTL 209
Query: 851 RNMFSDHGDVVEAKVIYDRESGRSRGFGFVTYNTGEEVNTAIDSLDGADLDGRQIRVTQA 672
N+F + G+V+EAKV+YDR+SG+SRGFGFVTYN+ EEVN AI SLDG DLDGR IRVTQA
Sbjct: 210 ENLFREKGNVLEAKVVYDRDSGKSRGFGFVTYNSAEEVNEAIQSLDGVDLDGRPIRVTQA 269
Query: 671 EARPPRRQF 645
EARPPRRQF
Sbjct: 270 EARPPRRQF 278
>ref|XP_006294745.1| hypothetical protein CARUB_v10023790mg [Capsella rubella]
gi|482563453|gb|EOA27643.1| hypothetical protein
CARUB_v10023790mg [Capsella rubella]
Length = 284
Score = 270 bits (690), Expect = 1e-69
Identities = 143/246 (58%), Positives = 173/246 (70%), Gaps = 3/246 (1%)
Frame = -1
Query: 1373 RFSALSSKFVRNXXXXXXXXXXXXXXVFG---DRGFSPDVKLFVGNLPFSADSAQLAGLF 1203
++S+ +S+FVRN ++ FS D+KLFVGNLPF+ DSAQLA LF
Sbjct: 51 KWSSPASRFVRNVATSEFEVEEDGFSDDAAPQEQSFSADLKLFVGNLPFNVDSAQLAQLF 110
Query: 1202 ETAGNVEMVEVIYDKATGRSRGFGFVTMSSVXXXXXXAQQFNGYDLDGRTLRVNAGPPPP 1023
E+AGNVEMVEVIYDK TGRSRGFGFVTMSS AQQFNGY+LDGR LRVNAGPPPP
Sbjct: 111 ESAGNVEMVEVIYDKVTGRSRGFGFVTMSSASEVEAAAQQFNGYELDGRPLRVNAGPPPP 170
Query: 1022 RREGSFQREGSFPPPRREGSFQRENXXXXXXXXXXXXXXSHRIHVGNLSWGVDDLALRNM 843
+RE F R R + +R++VGNLSWGVDD+AL ++
Sbjct: 171 KREDGFSRG------------PRSSFGGSGYGGGSGAGSGNRVYVGNLSWGVDDMALESL 218
Query: 842 FSDHGDVVEAKVIYDRESGRSRGFGFVTYNTGEEVNTAIDSLDGADLDGRQIRVTQAEAR 663
F++ G VVEA+VIYDR+SGRS+GFGFVTYN+ +EV AI+SL+GADLDGRQIRV++AEAR
Sbjct: 219 FAEQGKVVEARVIYDRDSGRSKGFGFVTYNSSQEVQNAINSLNGADLDGRQIRVSEAEAR 278
Query: 662 PPRRQF 645
PPRRQF
Sbjct: 279 PPRRQF 284
>ref|NP_181259.1| chloroplast RNA binding protein [Arabidopsis thaliana]
gi|12230623|sp|Q9ZUU4.1|ROC1_ARATH RecName:
Full=Ribonucleoprotein At2g37220, chloroplastic; Flags:
Precursor gi|13877809|gb|AAK43982.1|AF370167_1 putative
RNA-binding protein [Arabidopsis thaliana]
gi|4056477|gb|AAC98043.1| putative RNA-binding protein
[Arabidopsis thaliana] gi|15081717|gb|AAK82513.1|
At2g37220/F3G5.1 [Arabidopsis thaliana]
gi|16323482|gb|AAL15235.1| putative RNA-binding protein
[Arabidopsis thaliana] gi|20197716|gb|AAM15222.1|
putative RNA-binding protein [Arabidopsis thaliana]
gi|330254275|gb|AEC09369.1| chloroplast RNA binding
protein [Arabidopsis thaliana]
Length = 289
Score = 270 bits (689), Expect = 2e-69
Identities = 140/214 (65%), Positives = 164/214 (76%)
Frame = -1
Query: 1286 DRGFSPDVKLFVGNLPFSADSAQLAGLFETAGNVEMVEVIYDKATGRSRGFGFVTMSSVX 1107
++ FS D+KLFVGNLPF+ DSAQLA LFE+AGNVEMVEVIYDK TGRSRGFGFVTMSSV
Sbjct: 84 EQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVS 143
Query: 1106 XXXXXAQQFNGYDLDGRTLRVNAGPPPPRREGSFQREGSFPPPRREGSFQRENXXXXXXX 927
AQQFNGY+LDGR LRVNAGPPPP+RE F R P GS +
Sbjct: 144 EVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSR----GPRSSFGS----SGSGYGGG 195
Query: 926 XXXXXXXSHRIHVGNLSWGVDDLALRNMFSDHGDVVEAKVIYDRESGRSRGFGFVTYNTG 747
+R++VGNLSWGVDD+AL ++FS+ G VVEA+VIYDR+SGRS+GFGFVTY++
Sbjct: 196 GGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSS 255
Query: 746 EEVNTAIDSLDGADLDGRQIRVTQAEARPPRRQF 645
+EV AI SLDGADLDGRQIRV++AEARPPRRQ+
Sbjct: 256 QEVQNAIKSLDGADLDGRQIRVSEAEARPPRRQY 289
Score = 71.2 bits (173), Expect = 1e-09
Identities = 39/93 (41%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Frame = -1
Query: 1289 GDRGFSPDVKLFVGNLPFSADSAQLAGLFETAGNVEMVEVIYDKATGRSRGFGFVTMSSV 1110
G G +++VGNL + D L LF G V VIYD+ +GRS+GFGFVT S
Sbjct: 196 GGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSS 255
Query: 1109 XXXXXXAQQFNGYDLDGRTLRVN-AGPPPPRRE 1014
+ +G DLDGR +RV+ A PPRR+
Sbjct: 256 QEVQNAIKSLDGADLDGRQIRVSEAEARPPRRQ 288
>gb|AAM66970.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 289
Score = 270 bits (689), Expect = 2e-69
Identities = 140/214 (65%), Positives = 164/214 (76%)
Frame = -1
Query: 1286 DRGFSPDVKLFVGNLPFSADSAQLAGLFETAGNVEMVEVIYDKATGRSRGFGFVTMSSVX 1107
++ FS D+KLFVGNLPF+ DSAQLA LFE+AGNVEMVEVIYDK TGRSRGFGFVTMSSV
Sbjct: 84 EQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVS 143
Query: 1106 XXXXXAQQFNGYDLDGRTLRVNAGPPPPRREGSFQREGSFPPPRREGSFQRENXXXXXXX 927
AQQFNGY+LDGR LRVNAGPPPP+RE F R P GS +
Sbjct: 144 EVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSR----GPRSSFGS----SGSGYGGG 195
Query: 926 XXXXXXXSHRIHVGNLSWGVDDLALRNMFSDHGDVVEAKVIYDRESGRSRGFGFVTYNTG 747
+R++VGNLSWGVDD+AL ++FS+ G VVEA+VIYDR+SGRS+GFGFVTY++
Sbjct: 196 GGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSS 255
Query: 746 EEVNTAIDSLDGADLDGRQIRVTQAEARPPRRQF 645
+EV AI SLDGADLDGRQIRV++AEARPPRRQ+
Sbjct: 256 QEVQNAIKSLDGADLDGRQIRVSEAEARPPRRQY 289
Score = 71.2 bits (173), Expect = 1e-09
Identities = 39/93 (41%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Frame = -1
Query: 1289 GDRGFSPDVKLFVGNLPFSADSAQLAGLFETAGNVEMVEVIYDKATGRSRGFGFVTMSSV 1110
G G +++VGNL + D L LF G V VIYD+ +GRS+GFGFVT S
Sbjct: 196 GGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSS 255
Query: 1109 XXXXXXAQQFNGYDLDGRTLRVN-AGPPPPRRE 1014
+ +G DLDGR +RV+ A PPRR+
Sbjct: 256 QEVQNAIKSLDGADLDGRQIRVSEAEARPPRRQ 288
>ref|XP_002881497.1| hypothetical protein ARALYDRAFT_482714 [Arabidopsis lyrata subsp.
lyrata] gi|297327336|gb|EFH57756.1| hypothetical protein
ARALYDRAFT_482714 [Arabidopsis lyrata subsp. lyrata]
Length = 289
Score = 268 bits (686), Expect = 4e-69
Identities = 147/254 (57%), Positives = 177/254 (69%), Gaps = 6/254 (2%)
Frame = -1
Query: 1388 FPSVKRFSALSSKFVRNXXXXXXXXXXXXXXVFGD------RGFSPDVKLFVGNLPFSAD 1227
F ++++ +S+FVRN F D + FS D+KLFVGNLPF+ D
Sbjct: 46 FSIAAKWNSPASRFVRNVAITSEFEVEEDG--FADDAAPQQQSFSADLKLFVGNLPFNVD 103
Query: 1226 SAQLAGLFETAGNVEMVEVIYDKATGRSRGFGFVTMSSVXXXXXXAQQFNGYDLDGRTLR 1047
SAQLA LFE+AGNVEMVEVIYDK TGRSRGFGFVTMSSV A QFNGY+LDGR LR
Sbjct: 104 SAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSSVSEVEAAANQFNGYELDGRPLR 163
Query: 1046 VNAGPPPPRREGSFQREGSFPPPRREGSFQRENXXXXXXXXXXXXXXSHRIHVGNLSWGV 867
VNAGPPPP+RE F R P GS + +R++VGNLSWGV
Sbjct: 164 VNAGPPPPKREDGFSR----GPRSSFGS----SGSGYGGGGGSGAGSGNRVYVGNLSWGV 215
Query: 866 DDLALRNMFSDHGDVVEAKVIYDRESGRSRGFGFVTYNTGEEVNTAIDSLDGADLDGRQI 687
DD+AL ++F++ G VVEA+VIYDR+SGRS+GFGFVTYN+ +EV AI+SL+GADLDGRQI
Sbjct: 216 DDMALESLFAEQGKVVEARVIYDRDSGRSKGFGFVTYNSSQEVQNAINSLNGADLDGRQI 275
Query: 686 RVTQAEARPPRRQF 645
RV++AEARPPRRQF
Sbjct: 276 RVSEAEARPPRRQF 289
>sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
Full=CP29A; Flags: Precursor gi|19754|emb|CAA43427.1|
29kD A ribonucleoprotein [Nicotiana sylvestris]
Length = 273
Score = 267 bits (682), Expect = 1e-68
Identities = 140/214 (65%), Positives = 159/214 (74%)
Frame = -1
Query: 1286 DRGFSPDVKLFVGNLPFSADSAQLAGLFETAGNVEMVEVIYDKATGRSRGFGFVTMSSVX 1107
+R FSPD+K+FVGNLPFSADSA LA LFE AGNVEMVEVIYDK TGRSRGFGFVTMSS
Sbjct: 80 ERNFSPDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKE 139
Query: 1106 XXXXXAQQFNGYDLDGRTLRVNAGPPPPRREGSFQREGSFPPPRREGSFQRENXXXXXXX 927
QQFNGY+LDGR LRVN+GPPP +RE S R GS R GSF N
Sbjct: 140 EVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRGGS----RGGGSFDSSN------- 188
Query: 926 XXXXXXXSHRIHVGNLSWGVDDLALRNMFSDHGDVVEAKVIYDRESGRSRGFGFVTYNTG 747
R++VGNL+WGVD AL +FS+ G VV+AKV+YDR+SGRSRGFGFVTY++
Sbjct: 189 ---------RVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSA 239
Query: 746 EEVNTAIDSLDGADLDGRQIRVTQAEARPPRRQF 645
EEVN AI+SLDG DL+GR IRV+ AEARPPRRQF
Sbjct: 240 EEVNNAIESLDGVDLNGRAIRVSPAEARPPRRQF 273
Score = 73.2 bits (178), Expect = 3e-10
Identities = 39/93 (41%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Frame = -1
Query: 1289 GDRGFSPDVKLFVGNLPFSADSAQLAGLFETAGNVEMVEVIYDKATGRSRGFGFVTMSSV 1110
G F +++VGNL + D L LF G V +V+YD+ +GRSRGFGFVT SS
Sbjct: 180 GGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSA 239
Query: 1109 XXXXXXAQQFNGYDLDGRTLRVN-AGPPPPRRE 1014
+ +G DL+GR +RV+ A PPRR+
Sbjct: 240 EEVNNAIESLDGVDLNGRAIRVSPAEARPPRRQ 272
>ref|XP_006428771.1| hypothetical protein CICLE_v10012331mg [Citrus clementina]
gi|568855826|ref|XP_006481497.1| PREDICTED:
ribonucleoprotein At2g37220, chloroplastic-like [Citrus
sinensis] gi|557530828|gb|ESR42011.1| hypothetical
protein CICLE_v10012331mg [Citrus clementina]
Length = 282
Score = 266 bits (679), Expect = 3e-68
Identities = 142/211 (67%), Positives = 159/211 (75%)
Frame = -1
Query: 1277 FSPDVKLFVGNLPFSADSAQLAGLFETAGNVEMVEVIYDKATGRSRGFGFVTMSSVXXXX 1098
FSPD+KLFVGNLPFS DSAQLAGLFETAGNVEMVEVIYDK TGRSRGFGFVTMSSV
Sbjct: 90 FSPDLKLFVGNLPFSVDSAQLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMSSVEEVE 149
Query: 1097 XXAQQFNGYDLDGRTLRVNAGPPPPRREGSFQREGSFPPPRREGSFQRENXXXXXXXXXX 918
AQQFNGY+L+GR LRVN+GPPPPRRE F G PR G+
Sbjct: 150 AAAQQFNGYELEGRPLRVNSGPPPPRRE-EFSPRG----PRGGGA-------------GA 191
Query: 917 XXXXSHRIHVGNLSWGVDDLALRNMFSDHGDVVEAKVIYDRESGRSRGFGFVTYNTGEEV 738
+R++VGNLSWGVDDLAL +F + G V+EAKV+YDRESGRSRGFGFVTY++ EEV
Sbjct: 192 PSSGGNRVYVGNLSWGVDDLALETLFREQGKVLEAKVVYDRESGRSRGFGFVTYSSAEEV 251
Query: 737 NTAIDSLDGADLDGRQIRVTQAEARPPRRQF 645
+ AIDSL+G DL GR IRV+ AEARP RRQF
Sbjct: 252 DNAIDSLNGVDLAGRAIRVSVAEARPQRRQF 282
>ref|XP_006363665.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like isoform X1
[Solanum tuberosum]
Length = 301
Score = 265 bits (676), Expect = 6e-68
Identities = 145/250 (58%), Positives = 169/250 (67%), Gaps = 4/250 (1%)
Frame = -1
Query: 1382 SVKRF--SALSSKFVRNXXXXXXXXXXXXXXVFGDR-GFSPDVKLFVGNLPFSADSAQLA 1212
S+K F S+ S+FVRN + FSPD+KLFVGNLPFS DSA LA
Sbjct: 52 SIKPFESSSFGSRFVRNVALSEFDQLEDDVGEVEEEPNFSPDLKLFVGNLPFSVDSAALA 111
Query: 1211 GLFETAGNVEMVEVIYDKATGRSRGFGFVTMSSVXXXXXXAQQFNGYDLDGRTLRVNAGP 1032
LFE AGNVEMVEVIYDK TGRSRGFGFVTMSS QQFNGY++DGR LRVN+GP
Sbjct: 112 ELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKAEVEAAEQQFNGYEIDGRALRVNSGP 171
Query: 1031 PPPRREGSF-QREGSFPPPRREGSFQRENXXXXXXXXXXXXXXSHRIHVGNLSWGVDDLA 855
P +RE SF G G + EN S+R++VGNLSWGVDDL+
Sbjct: 172 APEKRENSFGGGRGGRSENSSYGGGRSENSSYGGARGGRNFDSSNRVYVGNLSWGVDDLS 231
Query: 854 LRNMFSDHGDVVEAKVIYDRESGRSRGFGFVTYNTGEEVNTAIDSLDGADLDGRQIRVTQ 675
LR +FSD G VV+ KV+YDR+SGRSRGFGFVT+++ +EVN AIDSL+G DLDGR IRV+
Sbjct: 232 LRELFSDQGKVVDCKVVYDRDSGRSRGFGFVTFSSAQEVNKAIDSLNGFDLDGRSIRVSA 291
Query: 674 AEARPPRRQF 645
AE RPPRRQF
Sbjct: 292 AEERPPRRQF 301
>ref|XP_006410902.1| hypothetical protein EUTSA_v10017023mg [Eutrema salsugineum]
gi|557112071|gb|ESQ52355.1| hypothetical protein
EUTSA_v10017023mg [Eutrema salsugineum]
Length = 292
Score = 265 bits (676), Expect = 6e-68
Identities = 142/251 (56%), Positives = 169/251 (67%), Gaps = 5/251 (1%)
Frame = -1
Query: 1382 SVKRFSALSSKFVRNXXXXXXXXXXXXXXVFGD-----RGFSPDVKLFVGNLPFSADSAQ 1218
S ++S+ +S+FVRN D + FS D+KLFVGNLPF DSA+
Sbjct: 52 SAAKWSSAASRFVRNVAVTEDFEVEEDGIFADDAAPREQSFSADLKLFVGNLPFDVDSAR 111
Query: 1217 LAGLFETAGNVEMVEVIYDKATGRSRGFGFVTMSSVXXXXXXAQQFNGYDLDGRTLRVNA 1038
LA LFE+AG VE+VEVIYDK TGRSRGFGFVTMSS AQQFNGY+LDGR LRVNA
Sbjct: 112 LAQLFESAGTVEIVEVIYDKITGRSRGFGFVTMSSASEVEAAAQQFNGYELDGRPLRVNA 171
Query: 1037 GPPPPRREGSFQREGSFPPPRREGSFQRENXXXXXXXXXXXXXXSHRIHVGNLSWGVDDL 858
GPPPP+RE F R G +R++VGNLSWGVDD+
Sbjct: 172 GPPPPKREDGFSR----------GPRSSFGSSGSGYGGGSGAGSGNRVYVGNLSWGVDDM 221
Query: 857 ALRNMFSDHGDVVEAKVIYDRESGRSRGFGFVTYNTGEEVNTAIDSLDGADLDGRQIRVT 678
AL N+F + G VVEA+VIYDR+SGRS+GFGFVTYN+ +EV AI +L+GADLDGRQIRV+
Sbjct: 222 ALENLFGEQGKVVEARVIYDRDSGRSKGFGFVTYNSAQEVQNAIRTLNGADLDGRQIRVS 281
Query: 677 QAEARPPRRQF 645
+AEARPPRRQF
Sbjct: 282 EAEARPPRRQF 292
>gb|EMJ06843.1| hypothetical protein PRUPE_ppa009295mg [Prunus persica]
Length = 298
Score = 264 bits (675), Expect = 7e-68
Identities = 145/244 (59%), Positives = 169/244 (69%), Gaps = 1/244 (0%)
Frame = -1
Query: 1373 RFSALSSKFVRNXXXXXXXXXXXXXXVF-GDRGFSPDVKLFVGNLPFSADSAQLAGLFET 1197
RF + SS+FVRN G+ F+PD+KLFVGNLPFS DSAQLAGLFE+
Sbjct: 78 RFQSASSRFVRNVAVSSEFEQDEEVLSDDGEASFAPDLKLFVGNLPFSVDSAQLAGLFES 137
Query: 1196 AGNVEMVEVIYDKATGRSRGFGFVTMSSVXXXXXXAQQFNGYDLDGRTLRVNAGPPPPRR 1017
AGNVEMVEVIYDK TGRSRGFGFVTMSSV A+Q NGY+LDGR LRVN GPPPPR
Sbjct: 138 AGNVEMVEVIYDKTTGRSRGFGFVTMSSVQEAEGAARQLNGYELDGRALRVNYGPPPPRS 197
Query: 1016 EGSFQREGSFPPPRREGSFQRENXXXXXXXXXXXXXXSHRIHVGNLSWGVDDLALRNMFS 837
E SF+ R G N R++VGNL+WGVD+LAL N+FS
Sbjct: 198 EDSFR------GARGGGGSDSSN----------------RLYVGNLAWGVDNLALENLFS 235
Query: 836 DHGDVVEAKVIYDRESGRSRGFGFVTYNTGEEVNTAIDSLDGADLDGRQIRVTQAEARPP 657
+ G V+EAKV+YDR+SGRSRGFGFVTY T +E+N+A++SLDG DL+GR IRVT AE R P
Sbjct: 236 EQGKVLEAKVVYDRDSGRSRGFGFVTYGTADEMNSAMESLDGVDLNGRSIRVTAAEPR-P 294
Query: 656 RRQF 645
RRQF
Sbjct: 295 RRQF 298
>ref|XP_004304439.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 277
Score = 263 bits (671), Expect = 2e-67
Identities = 138/213 (64%), Positives = 161/213 (75%), Gaps = 2/213 (0%)
Frame = -1
Query: 1277 FSPDVKLFVGNLPFSADSAQLAGLFETAGNVEMVEVIYDKATGRSRGFGFVTMSSVXXXX 1098
FSPD+KLFVGNLPF+ DSAQLA LFE AGNVEMVEVIYDK TGRSRGFGFVTMSS
Sbjct: 83 FSPDLKLFVGNLPFTVDSAQLAELFEGAGNVEMVEVIYDKTTGRSRGFGFVTMSSAQEVE 142
Query: 1097 XXAQQFNGYDLDGRTLRVNAGPPPPRREGSFQ--REGSFPPPRREGSFQRENXXXXXXXX 924
A+QFNGY+LDGR LRVN GPPPPR E SF+ R GS PR G + +
Sbjct: 143 AAARQFNGYELDGRALRVNYGPPPPRTEDSFRGARGGS---PRGGGGYGDSS-------- 191
Query: 923 XXXXXXSHRIHVGNLSWGVDDLALRNMFSDHGDVVEAKVIYDRESGRSRGFGFVTYNTGE 744
+R++VGNL+WGVD+LAL N+F++ G V+EAKV++DR+SGRSRGFGFVTY + E
Sbjct: 192 -------NRLYVGNLAWGVDNLALENLFNEQGKVLEAKVVFDRDSGRSRGFGFVTYGSAE 244
Query: 743 EVNTAIDSLDGADLDGRQIRVTQAEARPPRRQF 645
E+N+AI+SLDG DL GR IRVT AE RPPRRQF
Sbjct: 245 EMNSAIESLDGVDLGGRSIRVTAAEPRPPRRQF 277
>sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName:
Full=CP-RBP30; Flags: Precursor gi|19708|emb|CAA46234.1|
RNA binding protein 30 [Nicotiana plumbaginifolia]
Length = 279
Score = 261 bits (668), Expect = 5e-67
Identities = 139/216 (64%), Positives = 158/216 (73%), Gaps = 2/216 (0%)
Frame = -1
Query: 1286 DRGFSPDVKLFVGNLPFSADSAQLAGLFETAGNVEMVEVIYDKATGRSRGFGFVTMSSVX 1107
+R FSPD+K+FVGNL FSADSA LA LFE AGNVEMVEVIYDK TGRSRGFGFVTMSS
Sbjct: 80 ERNFSPDLKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKE 139
Query: 1106 XXXXXAQQFNGYDLDGRTLRVNAGPPPPRREGSFQREGSF--PPPRREGSFQRENXXXXX 933
QQFNGY+LDGR LRVN+GPPP +RE S RE S R GSF N
Sbjct: 140 EVEAACQQFNGYELDGRALRVNSGPPPEKRENSSFRENSSFRGGSRGGGSFDSSN----- 194
Query: 932 XXXXXXXXXSHRIHVGNLSWGVDDLALRNMFSDHGDVVEAKVIYDRESGRSRGFGFVTYN 753
R++VGNL+WGVD AL +FS+ G VV+AKV+YDR+SGRSRGFGFVTY+
Sbjct: 195 -----------RVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYS 243
Query: 752 TGEEVNTAIDSLDGADLDGRQIRVTQAEARPPRRQF 645
+ EEVN AI+SLDG DL+GR IRV+ AEARPPRRQF
Sbjct: 244 SAEEVNNAIESLDGVDLNGRAIRVSPAEARPPRRQF 279
Score = 73.2 bits (178), Expect = 3e-10
Identities = 39/93 (41%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Frame = -1
Query: 1289 GDRGFSPDVKLFVGNLPFSADSAQLAGLFETAGNVEMVEVIYDKATGRSRGFGFVTMSSV 1110
G F +++VGNL + D L LF G V +V+YD+ +GRSRGFGFVT SS
Sbjct: 186 GGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSA 245
Query: 1109 XXXXXXAQQFNGYDLDGRTLRVN-AGPPPPRRE 1014
+ +G DL+GR +RV+ A PPRR+
Sbjct: 246 EEVNNAIESLDGVDLNGRAIRVSPAEARPPRRQ 278
>ref|XP_006363666.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like isoform X2
[Solanum tuberosum]
Length = 291
Score = 261 bits (666), Expect = 8e-67
Identities = 145/251 (57%), Positives = 169/251 (67%), Gaps = 5/251 (1%)
Frame = -1
Query: 1382 SVKRF--SALSSKFVRNXXXXXXXXXXXXXXVFGDR-GFSPDVKLFVGNLPFSADSAQLA 1212
S+K F S+ S+FVRN + FSPD+KLFVGNLPFS DSA LA
Sbjct: 52 SIKPFESSSFGSRFVRNVALSEFDQLEDDVGEVEEEPNFSPDLKLFVGNLPFSVDSAALA 111
Query: 1211 GLFETAGNVEMVEVIYDKATGRSRGFGFVTMSSVXXXXXXAQQFNGYDLDGRTLRVNAGP 1032
LFE AGNVEMVEVIYDK TGRSRGFGFVTMSS QQFNGY++DGR LRVN+GP
Sbjct: 112 ELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKAEVEAAEQQFNGYEIDGRALRVNSGP 171
Query: 1031 PPPRREGSF--QREGSFPPPRREGSFQRENXXXXXXXXXXXXXXSHRIHVGNLSWGVDDL 858
P +RE SF R G + EN S+R++VGNLSWGVDDL
Sbjct: 172 APEKRENSFGGGRGG-----------RSENSSYGGARGGRNFDSSNRVYVGNLSWGVDDL 220
Query: 857 ALRNMFSDHGDVVEAKVIYDRESGRSRGFGFVTYNTGEEVNTAIDSLDGADLDGRQIRVT 678
+LR +FSD G VV+ KV+YDR+SGRSRGFGFVT+++ +EVN AIDSL+G DLDGR IRV+
Sbjct: 221 SLRELFSDQGKVVDCKVVYDRDSGRSRGFGFVTFSSAQEVNKAIDSLNGFDLDGRSIRVS 280
Query: 677 QAEARPPRRQF 645
AE RPPRRQF
Sbjct: 281 AAEERPPRRQF 291
>ref|NP_001050221.1| Os03g0376600 [Oryza sativa Japonica Group]
gi|18921322|gb|AAL82527.1|AC084766_13 putative
ribonucleoprotein [Oryza sativa Japonica Group]
gi|108708430|gb|ABF96225.1| RNA recognition motif family
protein, expressed [Oryza sativa Japonica Group]
gi|113548692|dbj|BAF12135.1| Os03g0376600 [Oryza sativa
Japonica Group] gi|125586437|gb|EAZ27101.1| hypothetical
protein OsJ_11032 [Oryza sativa Japonica Group]
gi|215697052|dbj|BAG91046.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215766568|dbj|BAG98727.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 265
Score = 258 bits (660), Expect = 4e-66
Identities = 136/215 (63%), Positives = 158/215 (73%)
Frame = -1
Query: 1289 GDRGFSPDVKLFVGNLPFSADSAQLAGLFETAGNVEMVEVIYDKATGRSRGFGFVTMSSV 1110
G FS D+++FVGNLPFS DSAQLAGLFE AG+VEMVEVIYDK TGRSRGFGFVTMSSV
Sbjct: 78 GGEEFSDDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSV 137
Query: 1109 XXXXXXAQQFNGYDLDGRTLRVNAGPPPPRREGSFQREGSFPPPRREGSFQRENXXXXXX 930
+QFNGY LDGR+LRVN+GPPPPR + S QR PR E
Sbjct: 138 EEVEAAVEQFNGYILDGRSLRVNSGPPPPREQSS-QR-----APRGEA------------ 179
Query: 929 XXXXXXXXSHRIHVGNLSWGVDDLALRNMFSDHGDVVEAKVIYDRESGRSRGFGFVTYNT 750
+R++VGNLSWGVD+ AL N+FS G+V+EAKVIYDRESGRSRGFGFVTY +
Sbjct: 180 ---------NRVYVGNLSWGVDNAALANLFSGEGEVLEAKVIYDRESGRSRGFGFVTYGS 230
Query: 749 GEEVNTAIDSLDGADLDGRQIRVTQAEARPPRRQF 645
EEV A+ +LDGAD+DGRQIRVT AE++PPRRQ+
Sbjct: 231 AEEVENAVSNLDGADMDGRQIRVTVAESKPPRRQY 265
>gb|EAY90218.1| hypothetical protein OsI_11785 [Oryza sativa Indica Group]
Length = 265
Score = 258 bits (659), Expect = 5e-66
Identities = 134/215 (62%), Positives = 157/215 (73%)
Frame = -1
Query: 1289 GDRGFSPDVKLFVGNLPFSADSAQLAGLFETAGNVEMVEVIYDKATGRSRGFGFVTMSSV 1110
G FS D+++FVGNLPFS DSAQLAGLFE AG+VEMVEVIYDK TGRSRGFGFVTMSSV
Sbjct: 78 GGEEFSDDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSV 137
Query: 1109 XXXXXXAQQFNGYDLDGRTLRVNAGPPPPRREGSFQREGSFPPPRREGSFQRENXXXXXX 930
+QFNGY LDGR+LRVN+GPPPPR + S + PR E
Sbjct: 138 EEVEAAVEQFNGYILDGRSLRVNSGPPPPREQSSRR------APRGEA------------ 179
Query: 929 XXXXXXXXSHRIHVGNLSWGVDDLALRNMFSDHGDVVEAKVIYDRESGRSRGFGFVTYNT 750
+R++VGNLSWGVD+ AL N+FS G+V+EAKVIYDRESGRSRGFGFVTY +
Sbjct: 180 ---------NRVYVGNLSWGVDNAALANLFSGEGEVLEAKVIYDRESGRSRGFGFVTYGS 230
Query: 749 GEEVNTAIDSLDGADLDGRQIRVTQAEARPPRRQF 645
EEV A+ +LDGAD+DGRQIRVT AE++PPRRQ+
Sbjct: 231 AEEVENAVSNLDGADMDGRQIRVTVAESKPPRRQY 265
>gb|EXC16209.1| 29 kDa ribonucleoprotein B [Morus notabilis]
Length = 296
Score = 257 bits (657), Expect = 9e-66
Identities = 136/212 (64%), Positives = 157/212 (74%)
Frame = -1
Query: 1280 GFSPDVKLFVGNLPFSADSAQLAGLFETAGNVEMVEVIYDKATGRSRGFGFVTMSSVXXX 1101
GFSPD+KLFVGNLPFS DSAQLAGLFE GNVEMVEVIYDK TGRSRGFGFVTMSS+
Sbjct: 97 GFSPDLKLFVGNLPFSVDSAQLAGLFERTGNVEMVEVIYDKTTGRSRGFGFVTMSSIDEV 156
Query: 1100 XXXAQQFNGYDLDGRTLRVNAGPPPPRREGSFQREGSFPPPRREGSFQRENXXXXXXXXX 921
AQQFNGY+L+GR LRVN GPPP R + SFP RR G
Sbjct: 157 EAAAQQFNGYELEGRPLRVNYGPPPSR------EDDSFPRGRRGG-----GGGGGGGGGG 205
Query: 920 XXXXXSHRIHVGNLSWGVDDLALRNMFSDHGDVVEAKVIYDRESGRSRGFGFVTYNTGEE 741
+R++VGNLSWGVD+ AL ++FS+ G V+EAKV+YDR+SGRSRGFGFVTYNT +E
Sbjct: 206 AGYETGNRVYVGNLSWGVDNAALESLFSEQGKVLEAKVVYDRDSGRSRGFGFVTYNTADE 265
Query: 740 VNTAIDSLDGADLDGRQIRVTQAEARPPRRQF 645
VN+AI+SL+G DL+GR IRVT AEA+ PRR F
Sbjct: 266 VNSAINSLNGVDLNGRSIRVTHAEAK-PRRSF 296
Score = 76.3 bits (186), Expect = 4e-11
Identities = 37/91 (40%), Positives = 52/91 (57%)
Frame = -1
Query: 1289 GDRGFSPDVKLFVGNLPFSADSAQLAGLFETAGNVEMVEVIYDKATGRSRGFGFVTMSSV 1110
G G+ +++VGNL + D+A L LF G V +V+YD+ +GRSRGFGFVT ++
Sbjct: 204 GGAGYETGNRVYVGNLSWGVDNAALESLFSEQGKVLEAKVVYDRDSGRSRGFGFVTYNTA 263
Query: 1109 XXXXXXAQQFNGYDLDGRTLRVNAGPPPPRR 1017
NG DL+GR++RV PRR
Sbjct: 264 DEVNSAINSLNGVDLNGRSIRVTHAEAKPRR 294
>ref|XP_002465205.1| hypothetical protein SORBIDRAFT_01g034120 [Sorghum bicolor]
gi|241919059|gb|EER92203.1| hypothetical protein
SORBIDRAFT_01g034120 [Sorghum bicolor]
Length = 262
Score = 256 bits (655), Expect = 2e-65
Identities = 134/215 (62%), Positives = 160/215 (74%)
Frame = -1
Query: 1289 GDRGFSPDVKLFVGNLPFSADSAQLAGLFETAGNVEMVEVIYDKATGRSRGFGFVTMSSV 1110
G+ FS D+++FVGNLPFS DSAQLAGLFE AG+VEMVEVIYDK TGRSRGFGFVTMSSV
Sbjct: 75 GEEEFSEDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSV 134
Query: 1109 XXXXXXAQQFNGYDLDGRTLRVNAGPPPPRREGSFQREGSFPPPRREGSFQRENXXXXXX 930
+QFNGY LDGR+LRVN+GPPPP R+ S QR PR +
Sbjct: 135 QEVEAAVEQFNGYVLDGRSLRVNSGPPPP-RDPSSQR-----GPRGDA------------ 176
Query: 929 XXXXXXXXSHRIHVGNLSWGVDDLALRNMFSDHGDVVEAKVIYDRESGRSRGFGFVTYNT 750
+R++VGNLSWGVD+ AL N+FS+ G+V+EA+++YDRESGRSRGFGFVTY +
Sbjct: 177 ---------NRVYVGNLSWGVDNSALANLFSEQGEVLEARIVYDRESGRSRGFGFVTYGS 227
Query: 749 GEEVNTAIDSLDGADLDGRQIRVTQAEARPPRRQF 645
EEV AI +LDG+DLDGRQIRVT AE++PPRRQF
Sbjct: 228 AEEVENAISNLDGSDLDGRQIRVTVAESKPPRRQF 262
>ref|XP_006846809.1| hypothetical protein AMTR_s00148p00072380 [Amborella trichopoda]
gi|548849631|gb|ERN08390.1| hypothetical protein
AMTR_s00148p00072380 [Amborella trichopoda]
Length = 272
Score = 256 bits (654), Expect = 2e-65
Identities = 138/214 (64%), Positives = 157/214 (73%)
Frame = -1
Query: 1286 DRGFSPDVKLFVGNLPFSADSAQLAGLFETAGNVEMVEVIYDKATGRSRGFGFVTMSSVX 1107
+ FS D+KLFVGNLPFS DSA+LA LFE AGNVEMVEVIYDK TGRSRGFGFVTMS+V
Sbjct: 77 EANFSADLKLFVGNLPFSVDSARLAELFEQAGNVEMVEVIYDKQTGRSRGFGFVTMSTVE 136
Query: 1106 XXXXXAQQFNGYDLDGRTLRVNAGPPPPRREGSFQREGSFPPPRREGSFQRENXXXXXXX 927
QQFNG+D +GR LRVN+GPPP R E S + F PR SF N
Sbjct: 137 EVEAAVQQFNGHDFEGRQLRVNSGPPPARDEMSPRGSRGFDSPRPR-SFDSPN------- 188
Query: 926 XXXXXXXSHRIHVGNLSWGVDDLALRNMFSDHGDVVEAKVIYDRESGRSRGFGFVTYNTG 747
R++VGNLSWGVDDLAL N+FS+ G V+EAKV+YDRESGRSRGFGFVTY+T
Sbjct: 189 ---------RVYVGNLSWGVDDLALENLFSEQGKVMEAKVVYDRESGRSRGFGFVTYSTA 239
Query: 746 EEVNTAIDSLDGADLDGRQIRVTQAEARPPRRQF 645
EEV +AI +L+GADLDGR IRVT AEA+ PRRQF
Sbjct: 240 EEVTSAISTLNGADLDGRPIRVTPAEAK-PRRQF 272
>tpg|DAA45554.1| TPA: ribonucleoprotein A [Zea mays]
Length = 262
Score = 255 bits (652), Expect = 3e-65
Identities = 133/215 (61%), Positives = 158/215 (73%)
Frame = -1
Query: 1289 GDRGFSPDVKLFVGNLPFSADSAQLAGLFETAGNVEMVEVIYDKATGRSRGFGFVTMSSV 1110
G FS D+++FVGNLPFS DSAQLAGLFE AG+VEMVEVIYDK TGRSRGFGFVTMSSV
Sbjct: 73 GGDEFSDDLRVFVGNLPFSVDSAQLAGLFEQAGSVEMVEVIYDKLTGRSRGFGFVTMSSV 132
Query: 1109 XXXXXXAQQFNGYDLDGRTLRVNAGPPPPRREGSFQREGSFPPPRREGSFQRENXXXXXX 930
QFNGY LDGR+LRVN+GPPPP R+ S P P+R
Sbjct: 133 EEVEVAVDQFNGYVLDGRSLRVNSGPPPP-------RDRSSPSPQR-------------- 171
Query: 929 XXXXXXXXSHRIHVGNLSWGVDDLALRNMFSDHGDVVEAKVIYDRESGRSRGFGFVTYNT 750
++R++VGNLSWGVD+ AL N+FS+ G+V+EA++IYDRESGRSRGFGFVTY +
Sbjct: 172 ----PRGDANRVYVGNLSWGVDNSALANLFSEQGEVLEARIIYDRESGRSRGFGFVTYGS 227
Query: 749 GEEVNTAIDSLDGADLDGRQIRVTQAEARPPRRQF 645
EEV AI +LDGADLDGRQIRVT AE++PPR+Q+
Sbjct: 228 AEEVENAISNLDGADLDGRQIRVTVAESKPPRQQY 262