BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rheum21_contig00001952
         (484 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534305.1| PREDICTED: phosphoribulokinase, chloroplasti...   125   6e-27
ref|XP_003516852.1| PREDICTED: phosphoribulokinase, chloroplasti...   124   2e-26
gb|ACU23619.1| unknown [Glycine max]                                  124   2e-26
sp|P27774.1|KPPR_MESCR RecName: Full=Phosphoribulokinase, chloro...   122   4e-26
ref|XP_004300170.1| PREDICTED: phosphoribulokinase, chloroplasti...   121   1e-25
ref|XP_004512451.1| PREDICTED: phosphoribulokinase, chloroplasti...   120   1e-25
ref|XP_003612664.1| Phosphoribulokinase [Medicago truncatula] gi...   120   2e-25
gb|ACJ84919.1| unknown [Medicago truncatula]                          120   2e-25
ref|XP_002303455.1| Phosphoribulokinase family protein [Populus ...   117   1e-24
gb|AFK43330.1| unknown [Lotus japonicus]                              117   2e-24
ref|XP_002263724.1| PREDICTED: phosphoribulokinase, chloroplasti...   117   2e-24
emb|CAN78901.1| hypothetical protein VITISV_011191 [Vitis vinifera]   117   2e-24
ref|XP_002519002.1| phosphoribulose kinase, putative [Ricinus co...   116   3e-24
gb|ESW30200.1| hypothetical protein PHAVU_002G133100g [Phaseolus...   116   4e-24
ref|XP_006432646.1| hypothetical protein CICLE_v10001344mg [Citr...   114   1e-23
gb|EMJ11710.1| hypothetical protein PRUPE_ppa006386mg [Prunus pe...   114   2e-23
ref|XP_002326572.1| predicted protein [Populus trichocarpa] gi|5...   113   2e-23
ref|XP_004146110.1| PREDICTED: phosphoribulokinase, chloroplasti...   112   4e-23
gb|EOY25272.1| Phosphoribulokinase [Theobroma cacao]                  112   5e-23
gb|ACN40656.1| unknown [Picea sitchensis]                             111   9e-23

>ref|XP_003534305.1| PREDICTED: phosphoribulokinase, chloroplastic-like [Glycine max]
          Length = 407

 Score =  125 bits (314), Expect = 6e-27
 Identities = 64/87 (73%), Positives = 72/87 (82%)
 Frame = +1

Query: 223 THLGLTRVDHVVLYTNNNKVNASFPRRARVITCAVGESQTVVIGLAADSGCGKSTFMRRL 402
           T L       VV + N+N+ ++S  RR+ VITCA G+SQTVVIGLAADSGCGKSTFMRRL
Sbjct: 24  TQLSFFHQKQVVFWRNSNRGSSS-SRRSYVITCAAGDSQTVVIGLAADSGCGKSTFMRRL 82

Query: 403 TSVFGGAAEPPRGGNPDSNTLISDTTT 483
           TSVFGGAAEPP+GGNPDSNTLISDTTT
Sbjct: 83  TSVFGGAAEPPKGGNPDSNTLISDTTT 109


>ref|XP_003516852.1| PREDICTED: phosphoribulokinase, chloroplastic-like [Glycine max]
          Length = 407

 Score =  124 bits (310), Expect = 2e-26
 Identities = 64/87 (73%), Positives = 70/87 (80%)
 Frame = +1

Query: 223 THLGLTRVDHVVLYTNNNKVNASFPRRARVITCAVGESQTVVIGLAADSGCGKSTFMRRL 402
           T L       VV + N+ K + S  RR+ VITCA G+SQTVVIGLAADSGCGKSTFMRRL
Sbjct: 24  TQLSFFHQKQVVFWRNSKKGSCS-SRRSYVITCAAGDSQTVVIGLAADSGCGKSTFMRRL 82

Query: 403 TSVFGGAAEPPRGGNPDSNTLISDTTT 483
           TSVFGGAAEPP+GGNPDSNTLISDTTT
Sbjct: 83  TSVFGGAAEPPKGGNPDSNTLISDTTT 109


>gb|ACU23619.1| unknown [Glycine max]
          Length = 407

 Score =  124 bits (310), Expect = 2e-26
 Identities = 64/87 (73%), Positives = 70/87 (80%)
 Frame = +1

Query: 223 THLGLTRVDHVVLYTNNNKVNASFPRRARVITCAVGESQTVVIGLAADSGCGKSTFMRRL 402
           T L       VV + N+ K + S  RR+ VITCA G+SQTVVIGLAADSGCGKSTFMRRL
Sbjct: 24  TQLSFFHQKQVVFWRNSKKGSCS-SRRSYVITCAAGDSQTVVIGLAADSGCGKSTFMRRL 82

Query: 403 TSVFGGAAEPPRGGNPDSNTLISDTTT 483
           TSVFGGAAEPP+GGNPDSNTLISDTTT
Sbjct: 83  TSVFGGAAEPPKGGNPDSNTLISDTTT 109


>sp|P27774.1|KPPR_MESCR RecName: Full=Phosphoribulokinase, chloroplastic; Short=PRK;
           Short=PRKase; AltName: Full=Phosphopentokinase; Flags:
           Precursor gi|167266|gb|AAA33034.1| phosphoribulokinase
           [Mesembryanthemum crystallinum]
          Length = 397

 Score =  122 bits (307), Expect = 4e-26
 Identities = 64/98 (65%), Positives = 71/98 (72%), Gaps = 2/98 (2%)
 Frame = +1

Query: 196 MAICA--VNAVTHLGLTRVDHVVLYTNNNKVNASFPRRARVITCAVGESQTVVIGLAADS 369
           MA+ A  V   +HLG  +   +     +     SF  R  VITC  G+SQT+VIGLAADS
Sbjct: 1   MAVSAYTVPTTSHLGFNQKKQLFFCNKSAYKRVSFSSRPCVITCLAGDSQTIVIGLAADS 60

Query: 370 GCGKSTFMRRLTSVFGGAAEPPRGGNPDSNTLISDTTT 483
           GCGKSTFMRRLTSVFGGAAEPPRGGNPDSNTLISDTTT
Sbjct: 61  GCGKSTFMRRLTSVFGGAAEPPRGGNPDSNTLISDTTT 98


>ref|XP_004300170.1| PREDICTED: phosphoribulokinase, chloroplastic-like [Fragaria vesca
           subsp. vesca]
          Length = 408

 Score =  121 bits (303), Expect = 1e-25
 Identities = 67/111 (60%), Positives = 73/111 (65%), Gaps = 15/111 (13%)
 Frame = +1

Query: 196 MAICAVNAVT---------------HLGLTRVDHVVLYTNNNKVNASFPRRARVITCAVG 330
           MAICAV+  T               HLG  +   VV YT      +S P    +I CA G
Sbjct: 1   MAICAVHTSTQFNPTCSSISTPSKSHLGFCQRQQVVFYTKRTSKRSSTPY-VGLIACAAG 59

Query: 331 ESQTVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPRGGNPDSNTLISDTTT 483
             +TVVIGLAADSGCGKSTFMRRLTSVFGGAAEPP+GGNPDSNTLISDTTT
Sbjct: 60  GQETVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTT 110


>ref|XP_004512451.1| PREDICTED: phosphoribulokinase, chloroplastic-like [Cicer
           arietinum]
          Length = 409

 Score =  120 bits (302), Expect = 1e-25
 Identities = 62/87 (71%), Positives = 70/87 (80%)
 Frame = +1

Query: 223 THLGLTRVDHVVLYTNNNKVNASFPRRARVITCAVGESQTVVIGLAADSGCGKSTFMRRL 402
           THLG  +   VV YT + K   +  +R  +ITC  G+SQT+VIGLAADSGCGKSTFMRRL
Sbjct: 26  THLGFNQ-KQVVFYTTSKKSRTNNNKRY-LITCKAGDSQTIVIGLAADSGCGKSTFMRRL 83

Query: 403 TSVFGGAAEPPRGGNPDSNTLISDTTT 483
           TSVFGGAAEPP+GGNPDSNTLISDTTT
Sbjct: 84  TSVFGGAAEPPKGGNPDSNTLISDTTT 110


>ref|XP_003612664.1| Phosphoribulokinase [Medicago truncatula]
           gi|355513999|gb|AES95622.1| Phosphoribulokinase
           [Medicago truncatula]
          Length = 411

 Score =  120 bits (300), Expect = 2e-25
 Identities = 65/106 (61%), Positives = 80/106 (75%), Gaps = 5/106 (4%)
 Frame = +1

Query: 181 PLYSQMAICAVNAVTHLGLTRVDHVVLYT-----NNNKVNASFPRRARVITCAVGESQTV 345
           PL + ++I   ++ TH+G  +   VV YT     +N + N++   R  +ITC  G+SQT+
Sbjct: 11  PLRTNISI-PTSSKTHVGFNQ-KQVVFYTTTKKSSNRRTNSN--NRRYLITCGAGDSQTI 66

Query: 346 VIGLAADSGCGKSTFMRRLTSVFGGAAEPPRGGNPDSNTLISDTTT 483
           VIGLAADSGCGKSTFMRRLTSVFGGAAEPP+GGNPDSNTLISDTTT
Sbjct: 67  VIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTT 112


>gb|ACJ84919.1| unknown [Medicago truncatula]
          Length = 411

 Score =  120 bits (300), Expect = 2e-25
 Identities = 65/106 (61%), Positives = 80/106 (75%), Gaps = 5/106 (4%)
 Frame = +1

Query: 181 PLYSQMAICAVNAVTHLGLTRVDHVVLYT-----NNNKVNASFPRRARVITCAVGESQTV 345
           PL + ++I   ++ TH+G  +   VV YT     +N + N++   R  +ITC  G+SQT+
Sbjct: 11  PLRTNISI-PTSSKTHVGFNQ-KQVVFYTTTKKSSNRRTNSN--NRRYLITCGAGDSQTI 66

Query: 346 VIGLAADSGCGKSTFMRRLTSVFGGAAEPPRGGNPDSNTLISDTTT 483
           VIGLAADSGCGKSTFMRRLTSVFGGAAEPP+GGNPDSNTLISDTTT
Sbjct: 67  VIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTT 112


>ref|XP_002303455.1| Phosphoribulokinase family protein [Populus trichocarpa]
           gi|222840887|gb|EEE78434.1| Phosphoribulokinase family
           protein [Populus trichocarpa]
          Length = 405

 Score =  117 bits (294), Expect = 1e-24
 Identities = 63/87 (72%), Positives = 69/87 (79%)
 Frame = +1

Query: 223 THLGLTRVDHVVLYTNNNKVNASFPRRARVITCAVGESQTVVIGLAADSGCGKSTFMRRL 402
           THLG  +  HVV Y+ N K        + VITC+  ++QTVVIGLAADSGCGKSTFMRRL
Sbjct: 24  THLGFNQ-RHVVFYSTNKKTTKR--ASSAVITCSA-DTQTVVIGLAADSGCGKSTFMRRL 79

Query: 403 TSVFGGAAEPPRGGNPDSNTLISDTTT 483
           TSVFGGAAEPPRGGNPDSNTLISDTTT
Sbjct: 80  TSVFGGAAEPPRGGNPDSNTLISDTTT 106


>gb|AFK43330.1| unknown [Lotus japonicus]
          Length = 251

 Score =  117 bits (293), Expect = 2e-24
 Identities = 59/92 (64%), Positives = 71/92 (77%)
 Frame = +1

Query: 208 AVNAVTHLGLTRVDHVVLYTNNNKVNASFPRRARVITCAVGESQTVVIGLAADSGCGKST 387
           A  + +H+G  +   +V Y   +  +++   R  VITCA G+ QT+VIGLAADSGCGKST
Sbjct: 19  ATPSKSHVGFHQKQQLVFYKRGS--DSTSTSRRYVITCAGGDQQTIVIGLAADSGCGKST 76

Query: 388 FMRRLTSVFGGAAEPPRGGNPDSNTLISDTTT 483
           FMRRLTSVFGGAAEPP+GGNPDSNTLISDTTT
Sbjct: 77  FMRRLTSVFGGAAEPPKGGNPDSNTLISDTTT 108


>ref|XP_002263724.1| PREDICTED: phosphoribulokinase, chloroplastic-like [Vitis vinifera]
          Length = 408

 Score =  117 bits (292), Expect = 2e-24
 Identities = 64/109 (58%), Positives = 71/109 (65%), Gaps = 13/109 (11%)
 Frame = +1

Query: 196 MAICAVNAVTHLGLT-------------RVDHVVLYTNNNKVNASFPRRARVITCAVGES 336
           MAIC V     L  T                 VV +T + + +      + VITC+ GE 
Sbjct: 1   MAICTVYTTQSLNSTCSVSKPAKPQLGFHQKQVVFFTKSRRRSGMSSCGSSVITCSAGEQ 60

Query: 337 QTVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPRGGNPDSNTLISDTTT 483
           +TVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPRGGNPDSNTLISDTTT
Sbjct: 61  RTVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPRGGNPDSNTLISDTTT 109


>emb|CAN78901.1| hypothetical protein VITISV_011191 [Vitis vinifera]
          Length = 408

 Score =  117 bits (292), Expect = 2e-24
 Identities = 64/109 (58%), Positives = 71/109 (65%), Gaps = 13/109 (11%)
 Frame = +1

Query: 196 MAICAVNAVTHLGLT-------------RVDHVVLYTNNNKVNASFPRRARVITCAVGES 336
           MAIC V     L  T                 VV +T + + +      + VITC+ GE 
Sbjct: 1   MAICTVYTTQSLNSTCSVSKPAKPQLGFHQKQVVFFTKSRRRSGMSSCGSSVITCSAGEQ 60

Query: 337 QTVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPRGGNPDSNTLISDTTT 483
           +TVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPRGGNPDSNTLISDTTT
Sbjct: 61  RTVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPRGGNPDSNTLISDTTT 109


>ref|XP_002519002.1| phosphoribulose kinase, putative [Ricinus communis]
           gi|223541989|gb|EEF43535.1| phosphoribulose kinase,
           putative [Ricinus communis]
          Length = 403

 Score =  116 bits (291), Expect = 3e-24
 Identities = 61/87 (70%), Positives = 67/87 (77%)
 Frame = +1

Query: 223 THLGLTRVDHVVLYTNNNKVNASFPRRARVITCAVGESQTVVIGLAADSGCGKSTFMRRL 402
           THLG  +   VV Y+      A+      VITC+  +SQTVVIGLAADSGCGKSTFMRRL
Sbjct: 24  THLGFNQ-KQVVFYSKRTNKRAT---STSVITCSADDSQTVVIGLAADSGCGKSTFMRRL 79

Query: 403 TSVFGGAAEPPRGGNPDSNTLISDTTT 483
           TSVFGGAAEPP+GGNPDSNTLISDTTT
Sbjct: 80  TSVFGGAAEPPKGGNPDSNTLISDTTT 106


>gb|ESW30200.1| hypothetical protein PHAVU_002G133100g [Phaseolus vulgaris]
          Length = 409

 Score =  116 bits (290), Expect = 4e-24
 Identities = 60/79 (75%), Positives = 63/79 (79%), Gaps = 2/79 (2%)
 Frame = +1

Query: 253 VVLYTNN--NKVNASFPRRARVITCAVGESQTVVIGLAADSGCGKSTFMRRLTSVFGGAA 426
           VV YT    N    S   R+ VITCA  + QTVVIGLAADSGCGKSTFMRRLTSVFGGAA
Sbjct: 33  VVFYTTGRRNSKRGSNSGRSYVITCAASDQQTVVIGLAADSGCGKSTFMRRLTSVFGGAA 92

Query: 427 EPPRGGNPDSNTLISDTTT 483
           EPP+GGNPDSNTLISDTTT
Sbjct: 93  EPPKGGNPDSNTLISDTTT 111


>ref|XP_006432646.1| hypothetical protein CICLE_v10001344mg [Citrus clementina]
           gi|568834708|ref|XP_006471453.1| PREDICTED:
           phosphoribulokinase, chloroplastic-like [Citrus
           sinensis] gi|557534768|gb|ESR45886.1| hypothetical
           protein CICLE_v10001344mg [Citrus clementina]
          Length = 407

 Score =  114 bits (285), Expect = 1e-23
 Identities = 60/93 (64%), Positives = 71/93 (76%), Gaps = 6/93 (6%)
 Frame = +1

Query: 223 THLGLTRVDH--VVLY----TNNNKVNASFPRRARVITCAVGESQTVVIGLAADSGCGKS 384
           THLG         V Y    ++++  ++S  R   VITC+ G+SQT+VIGLAADSGCGKS
Sbjct: 17  THLGFFNNQRQLAVFYNKRSSSSSSSSSSKQRGCLVITCSAGDSQTIVIGLAADSGCGKS 76

Query: 385 TFMRRLTSVFGGAAEPPRGGNPDSNTLISDTTT 483
           TFMRRLTSVFGGAAEPP+GGNPDSNTLIS+TTT
Sbjct: 77  TFMRRLTSVFGGAAEPPKGGNPDSNTLISETTT 109


>gb|EMJ11710.1| hypothetical protein PRUPE_ppa006386mg [Prunus persica]
          Length = 414

 Score =  114 bits (284), Expect = 2e-23
 Identities = 69/119 (57%), Positives = 74/119 (62%), Gaps = 23/119 (19%)
 Frame = +1

Query: 196 MAICAVNAVTHL---------------------GLTRVDHVVLYTNNNKVNASFPRRARV 312
           MAICAV   T L                     G  +   VV Y    K + S  RRA V
Sbjct: 1   MAICAVYTTTQLNPTCSFSTPASKTQTQLGFGLGFCQKQQVVFY----KRSQSNSRRASV 56

Query: 313 --ITCAVGESQTVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPRGGNPDSNTLISDTTT 483
             ITC+ G  +TVVIGLAADSGCGKSTFMRRLTSVFGGAAEPP+GGNPDSNTLISDTTT
Sbjct: 57  SLITCSAGGQETVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTT 115


>ref|XP_002326572.1| predicted protein [Populus trichocarpa]
           gi|566146625|ref|XP_006368325.1| Phosphoribulokinase
           family protein [Populus trichocarpa]
           gi|550346230|gb|ERP64894.1| Phosphoribulokinase family
           protein [Populus trichocarpa]
          Length = 405

 Score =  113 bits (283), Expect = 2e-23
 Identities = 60/87 (68%), Positives = 70/87 (80%)
 Frame = +1

Query: 223 THLGLTRVDHVVLYTNNNKVNASFPRRARVITCAVGESQTVVIGLAADSGCGKSTFMRRL 402
           T LG  +  H+V Y++N K +      + VITC+  ++QTVVIGLAADSGCGKSTFMRRL
Sbjct: 24  TRLGFNQ-KHLVFYSSNKKTSKR--ASSAVITCSA-DTQTVVIGLAADSGCGKSTFMRRL 79

Query: 403 TSVFGGAAEPPRGGNPDSNTLISDTTT 483
           TSVFGGAAEPP+GGNPDSNTLISDTTT
Sbjct: 80  TSVFGGAAEPPKGGNPDSNTLISDTTT 106


>ref|XP_004146110.1| PREDICTED: phosphoribulokinase, chloroplastic-like [Cucumis
           sativus] gi|449512946|ref|XP_004164185.1| PREDICTED:
           phosphoribulokinase, chloroplastic-like [Cucumis
           sativus]
          Length = 408

 Score =  112 bits (281), Expect = 4e-23
 Identities = 55/80 (68%), Positives = 64/80 (80%), Gaps = 1/80 (1%)
 Frame = +1

Query: 247 DHVVLYTNNNKVNASFPR-RARVITCAVGESQTVVIGLAADSGCGKSTFMRRLTSVFGGA 423
           +H+V + +  K  +        +ITC+ G+ QTVVIGLAADSGCGKSTFMRRLTSVFGGA
Sbjct: 30  EHIVFFASGKKSKSGKANTNPWLITCSAGDQQTVVIGLAADSGCGKSTFMRRLTSVFGGA 89

Query: 424 AEPPRGGNPDSNTLISDTTT 483
           A+PPRGGNPDSNTLISDTTT
Sbjct: 90  AKPPRGGNPDSNTLISDTTT 109


>gb|EOY25272.1| Phosphoribulokinase [Theobroma cacao]
          Length = 411

 Score =  112 bits (280), Expect = 5e-23
 Identities = 61/90 (67%), Positives = 68/90 (75%), Gaps = 3/90 (3%)
 Frame = +1

Query: 223 THLGLTRVDHVVLYTNNNKVN---ASFPRRARVITCAVGESQTVVIGLAADSGCGKSTFM 393
           THLG  +   VV Y+   + +   +S      VITC+  +SQTVVIGLAADSGCGKSTFM
Sbjct: 24  THLGFHQ-KQVVFYSTGKRTSKRGSSSSGGPCVITCSAVDSQTVVIGLAADSGCGKSTFM 82

Query: 394 RRLTSVFGGAAEPPRGGNPDSNTLISDTTT 483
           RRLTSVFGGAAEPPRGGNPDSNTLISD TT
Sbjct: 83  RRLTSVFGGAAEPPRGGNPDSNTLISDMTT 112


>gb|ACN40656.1| unknown [Picea sitchensis]
          Length = 400

 Score =  111 bits (278), Expect = 9e-23
 Identities = 55/63 (87%), Positives = 59/63 (93%)
 Frame = +1

Query: 295 PRRARVITCAVGESQTVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPRGGNPDSNTLISD 474
           PRRA V+ C+VG  +TVVIGLAADSGCGKSTFMRRLTSVFGGAAEPP+GGNPDSNTLISD
Sbjct: 40  PRRALVV-CSVGPEKTVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISD 98

Query: 475 TTT 483
           TTT
Sbjct: 99  TTT 101