BLASTX nr result
ID: Rheum21_contig00001478
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00001478
(980 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P82412.1|RRP3_SPIOL RecName: Full=30S ribosomal protein 3, ch... 207 5e-51
ref|XP_002283616.1| PREDICTED: 30S ribosomal protein 3, chloropl... 196 9e-48
emb|CBI33662.3| unnamed protein product [Vitis vinifera] 196 9e-48
gb|AFK46934.1| unknown [Lotus japonicus] 196 1e-47
gb|AFK41643.1| unknown [Lotus japonicus] 196 1e-47
ref|XP_004513065.1| PREDICTED: 30S ribosomal protein 3, chloropl... 194 4e-47
ref|XP_003620792.1| 30S ribosomal protein [Medicago truncatula] ... 192 1e-46
gb|EXB97159.1| 30S ribosomal protein 3 [Morus notabilis] 191 4e-46
ref|XP_006358052.1| PREDICTED: 30S ribosomal protein 3, chloropl... 189 1e-45
ref|XP_004304135.1| PREDICTED: 30S ribosomal protein 3, chloropl... 189 1e-45
ref|XP_004145640.1| PREDICTED: 30S ribosomal protein 3, chloropl... 189 1e-45
gb|EMJ17195.1| hypothetical protein PRUPE_ppa011873mg [Prunus pe... 188 3e-45
ref|XP_004234566.1| PREDICTED: 30S ribosomal protein 3, chloropl... 187 7e-45
ref|NP_001236243.1| uncharacterized protein LOC100306266 [Glycin... 186 1e-44
gb|ESW11139.1| hypothetical protein PHAVU_008G005100g [Phaseolus... 184 4e-44
ref|XP_002311451.2| hypothetical protein POPTR_0008s11750g [Popu... 177 5e-42
ref|XP_002315948.2| hypothetical protein POPTR_0010s13740g [Popu... 177 5e-42
gb|EOY04215.1| Ribosomal protein PSRP-3/Ycf65 [Theobroma cacao] 175 3e-41
gb|EOY02101.1| Ribosomal protein PSRP-3/Ycf65 [Theobroma cacao] 172 2e-40
ref|XP_002529130.1| Plastid-specific 30S ribosomal protein 3, ch... 172 2e-40
>sp|P82412.1|RRP3_SPIOL RecName: Full=30S ribosomal protein 3, chloroplastic; AltName:
Full=Plastid-specific 30S ribosomal protein 3;
Short=PSRP-3; Flags: Precursor
gi|7578871|gb|AAF64163.1|AF239218_1 plastid-specific
ribosomal protein 3 precursor [Spinacia oleracea]
Length = 179
Score = 207 bits (527), Expect = 5e-51
Identities = 113/180 (62%), Positives = 130/180 (72%), Gaps = 6/180 (3%)
Frame = +2
Query: 125 MMSMAVQPTINTYL-PQI--SPNFALKPLKASSSANPRHCHFHSLSTSRLKLHTRRDFAI 295
M+SMAVQP IN P I SP +LKP K + ANP+ F S S S+LK + ++++
Sbjct: 1 MLSMAVQPNINAIAKPSIYQSPKLSLKPFKTPAFANPKP-FFSSPSFSQLK--KKNNWSL 57
Query: 296 YXXXXXXXXXXXXXXKVSSP---AVEKQKLGVVVKPTDKPRLVLKFIWMEKNIGLGLDQA 466
+ +V V K+KL V+VKP DKPRLVLKFIWMEKNIGL LDQ
Sbjct: 58 FVAPETISDVAIMGNEVDIDDDLLVNKEKLKVLVKPMDKPRLVLKFIWMEKNIGLALDQT 117
Query: 467 IPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQAGGNL 646
IPGHGT+PLSPYYFWPRKDAWEELKVLLE+KPWISQKQMIILLNQATDIINLWQQ+GGNL
Sbjct: 118 IPGHGTVPLSPYYFWPRKDAWEELKVLLENKPWISQKQMIILLNQATDIINLWQQSGGNL 177
>ref|XP_002283616.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like isoform 1
[Vitis vinifera] gi|359488272|ref|XP_003633730.1|
PREDICTED: 30S ribosomal protein 3, chloroplastic-like
isoform 2 [Vitis vinifera]
Length = 176
Score = 196 bits (499), Expect = 9e-48
Identities = 106/183 (57%), Positives = 121/183 (66%), Gaps = 9/183 (4%)
Frame = +2
Query: 125 MMSMAVQPTINTYLPQISPNFALKPLKASSSANPRH---------CHFHSLSTSRLKLHT 277
M+SMAVQP +PN ALK S+N H +S ++ L
Sbjct: 2 MLSMAVQP---------NPNAALKSYTFPMSSNRNHRLMFKSSNALSLYSTRSASTNLRL 52
Query: 278 RRDFAIYXXXXXXXXXXXXXXKVSSPAVEKQKLGVVVKPTDKPRLVLKFIWMEKNIGLGL 457
R A +S+ ++ +KLGVVVKP +KPRLVLKFIWMEKNIG+ L
Sbjct: 53 RASPAPVVAVAVSEQSSAPQESLSASPLDVEKLGVVVKPMEKPRLVLKFIWMEKNIGVAL 112
Query: 458 DQAIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQAG 637
DQAIPGHGTIPLSPYYFWPRKDAWEE+KVLLESKPWISQKQMIILLNQATDIINLWQQ+G
Sbjct: 113 DQAIPGHGTIPLSPYYFWPRKDAWEEIKVLLESKPWISQKQMIILLNQATDIINLWQQSG 172
Query: 638 GNL 646
GNL
Sbjct: 173 GNL 175
>emb|CBI33662.3| unnamed protein product [Vitis vinifera]
Length = 175
Score = 196 bits (499), Expect = 9e-48
Identities = 106/183 (57%), Positives = 121/183 (66%), Gaps = 9/183 (4%)
Frame = +2
Query: 125 MMSMAVQPTINTYLPQISPNFALKPLKASSSANPRH---------CHFHSLSTSRLKLHT 277
M+SMAVQP +PN ALK S+N H +S ++ L
Sbjct: 1 MLSMAVQP---------NPNAALKSYTFPMSSNRNHRLMFKSSNALSLYSTRSASTNLRL 51
Query: 278 RRDFAIYXXXXXXXXXXXXXXKVSSPAVEKQKLGVVVKPTDKPRLVLKFIWMEKNIGLGL 457
R A +S+ ++ +KLGVVVKP +KPRLVLKFIWMEKNIG+ L
Sbjct: 52 RASPAPVVAVAVSEQSSAPQESLSASPLDVEKLGVVVKPMEKPRLVLKFIWMEKNIGVAL 111
Query: 458 DQAIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQAG 637
DQAIPGHGTIPLSPYYFWPRKDAWEE+KVLLESKPWISQKQMIILLNQATDIINLWQQ+G
Sbjct: 112 DQAIPGHGTIPLSPYYFWPRKDAWEEIKVLLESKPWISQKQMIILLNQATDIINLWQQSG 171
Query: 638 GNL 646
GNL
Sbjct: 172 GNL 174
>gb|AFK46934.1| unknown [Lotus japonicus]
Length = 175
Score = 196 bits (498), Expect = 1e-47
Identities = 108/174 (62%), Positives = 122/174 (70%), Gaps = 3/174 (1%)
Frame = +2
Query: 134 MAVQPTINTYLPQISPNFALKPLKASSSAN-PRHCHFHSLSTSRL--KLHTRRDFAIYXX 304
+AVQP P + P L P+K ++S++ H H HS S S L +R A+
Sbjct: 7 VAVQPP-----PTLRP-LTLSPIKFNTSSSFSSHSHSHSHSHSHLCPSNPSRFRLAVSAA 60
Query: 305 XXXXXXXXXXXXKVSSPAVEKQKLGVVVKPTDKPRLVLKFIWMEKNIGLGLDQAIPGHGT 484
+S + QKLGVVVKPTDKPRLVLKFIWMEKNIG+ LDQA+PGHGT
Sbjct: 61 ETPSAAVAVAEQDDTSLSPPPQKLGVVVKPTDKPRLVLKFIWMEKNIGIALDQAVPGHGT 120
Query: 485 IPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQAGGNL 646
IPLSPYYFWPRKDAWEELK LLESKPWISQKQMIILLNQATDIINLWQQ+GGNL
Sbjct: 121 IPLSPYYFWPRKDAWEELKELLESKPWISQKQMIILLNQATDIINLWQQSGGNL 174
>gb|AFK41643.1| unknown [Lotus japonicus]
Length = 175
Score = 196 bits (498), Expect = 1e-47
Identities = 106/166 (63%), Positives = 116/166 (69%), Gaps = 8/166 (4%)
Frame = +2
Query: 173 ISPNFALKPLKAS------SSANPRHCHFHSLSTSRL--KLHTRRDFAIYXXXXXXXXXX 328
+ P+ LKPL S SS+ H H HS S S L +R A+
Sbjct: 9 VQPHPTLKPLTLSPIKFNTSSSFSSHSHSHSHSHSHLCPSNPSRFRLAVSAAETPSAAVA 68
Query: 329 XXXXKVSSPAVEKQKLGVVVKPTDKPRLVLKFIWMEKNIGLGLDQAIPGHGTIPLSPYYF 508
+S + QKLGVVVKPTDKPRLVLKFIWMEKNIG+ LDQA+PGHGTIPLSPYYF
Sbjct: 69 VAEQDDTSLSPPPQKLGVVVKPTDKPRLVLKFIWMEKNIGIALDQAVPGHGTIPLSPYYF 128
Query: 509 WPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQAGGNL 646
WPRKDAWEELK LLESKPWISQKQMIILLNQATDIINLWQQ+GGNL
Sbjct: 129 WPRKDAWEELKELLESKPWISQKQMIILLNQATDIINLWQQSGGNL 174
>ref|XP_004513065.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Cicer
arietinum]
Length = 164
Score = 194 bits (493), Expect = 4e-47
Identities = 88/100 (88%), Positives = 96/100 (96%)
Frame = +2
Query: 347 SSPAVEKQKLGVVVKPTDKPRLVLKFIWMEKNIGLGLDQAIPGHGTIPLSPYYFWPRKDA 526
SSP+++ QKLGVVVKPTDKPRLVLKF+WMEKNIG+ LDQ +PGHGT+PLSPYYFWPRKDA
Sbjct: 64 SSPSLQSQKLGVVVKPTDKPRLVLKFVWMEKNIGIALDQMVPGHGTVPLSPYYFWPRKDA 123
Query: 527 WEELKVLLESKPWISQKQMIILLNQATDIINLWQQAGGNL 646
WEELK LLESKPWISQKQMIILLNQATDIINLWQQ+GGNL
Sbjct: 124 WEELKELLESKPWISQKQMIILLNQATDIINLWQQSGGNL 163
>ref|XP_003620792.1| 30S ribosomal protein [Medicago truncatula]
gi|217075300|gb|ACJ86010.1| unknown [Medicago
truncatula] gi|355495807|gb|AES77010.1| 30S ribosomal
protein [Medicago truncatula]
gi|388491518|gb|AFK33825.1| unknown [Medicago
truncatula]
Length = 161
Score = 192 bits (489), Expect = 1e-46
Identities = 90/98 (91%), Positives = 93/98 (94%)
Frame = +2
Query: 353 PAVEKQKLGVVVKPTDKPRLVLKFIWMEKNIGLGLDQAIPGHGTIPLSPYYFWPRKDAWE 532
P + QKLGVVVKPTDKPRLVLKFIWMEKNIG+GLDQ IPGHGTIPLSPYYFWPRKDAWE
Sbjct: 62 PPPQSQKLGVVVKPTDKPRLVLKFIWMEKNIGIGLDQMIPGHGTIPLSPYYFWPRKDAWE 121
Query: 533 ELKVLLESKPWISQKQMIILLNQATDIINLWQQAGGNL 646
ELK LLESKPWISQKQMIILLNQATDIINLWQQ+GGNL
Sbjct: 122 ELKELLESKPWISQKQMIILLNQATDIINLWQQSGGNL 159
>gb|EXB97159.1| 30S ribosomal protein 3 [Morus notabilis]
Length = 181
Score = 191 bits (485), Expect = 4e-46
Identities = 101/157 (64%), Positives = 112/157 (71%), Gaps = 6/157 (3%)
Frame = +2
Query: 194 KPLKASSSANPR-HCHFHSLSTSRLK-----LHTRRDFAIYXXXXXXXXXXXXXXKVSSP 355
KP++ S A PR + +S S S K H+ R FA+ V
Sbjct: 28 KPIQTSLFAKPRTFSNMNSRSFSEFKPTPTATHSSRKFALSASAVAAEDTTVDDSTVE-- 85
Query: 356 AVEKQKLGVVVKPTDKPRLVLKFIWMEKNIGLGLDQAIPGHGTIPLSPYYFWPRKDAWEE 535
+ +KLGVVVKP KPRL+LKFIWMEKNIG+GLDQ IPGHGTIPLSPYYFWPRKDAWEE
Sbjct: 86 --DTEKLGVVVKPVAKPRLILKFIWMEKNIGIGLDQVIPGHGTIPLSPYYFWPRKDAWEE 143
Query: 536 LKVLLESKPWISQKQMIILLNQATDIINLWQQAGGNL 646
LKVLLESKPWISQKQMIILLNQATDIINLWQQ+GGNL
Sbjct: 144 LKVLLESKPWISQKQMIILLNQATDIINLWQQSGGNL 180
>ref|XP_006358052.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Solanum
tuberosum]
Length = 176
Score = 189 bits (481), Expect = 1e-45
Identities = 100/178 (56%), Positives = 119/178 (66%), Gaps = 4/178 (2%)
Frame = +2
Query: 125 MMSMAVQPTINTYLPQISPNFALKPLKASSSANPRHCHFHSLSTSRLKLHTRRDFAIYXX 304
M SMA QPT+N S N P S + + ++S + RR+ ++
Sbjct: 2 MSSMATQPTVNWVPAFSSQNQFFSPKIVSFTKGQSYSRRSNVSA----IVPRRNLGVFAT 57
Query: 305 XXXXXXXXXXXXK----VSSPAVEKQKLGVVVKPTDKPRLVLKFIWMEKNIGLGLDQAIP 472
+SS + +K+KLGVVVKP +KPRLVLKFIWMEKNIG+ LDQ IP
Sbjct: 58 SAAAAVSFAEETSTHDSISSDSHQKEKLGVVVKPLEKPRLVLKFIWMEKNIGISLDQVIP 117
Query: 473 GHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQAGGNL 646
GHGTIPLSPYYFWPRKDAWEELKV+LESKPWIS+KQ IILLNQATDIINLWQQ+GG+L
Sbjct: 118 GHGTIPLSPYYFWPRKDAWEELKVMLESKPWISEKQTIILLNQATDIINLWQQSGGDL 175
>ref|XP_004304135.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 182
Score = 189 bits (480), Expect = 1e-45
Identities = 105/172 (61%), Positives = 116/172 (67%)
Frame = +2
Query: 131 SMAVQPTINTYLPQISPNFALKPLKASSSANPRHCHFHSLSTSRLKLHTRRDFAIYXXXX 310
S V+P + L + F KP + +S P F S S LKL T DF +
Sbjct: 17 STVVRPKLPHLLNNNTSTF--KPRRTTS---PSSSFFISHSLPHLKLRT--DFKLSAAAE 69
Query: 311 XXXXXXXXXXKVSSPAVEKQKLGVVVKPTDKPRLVLKFIWMEKNIGLGLDQAIPGHGTIP 490
VS +KLGVVVKP +KPRLVLKFIWMEKNIG+ LDQ IPGHG+IP
Sbjct: 70 ALVAQETAADDVSPADDGTEKLGVVVKPMEKPRLVLKFIWMEKNIGIALDQMIPGHGSIP 129
Query: 491 LSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQAGGNL 646
LSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ+GGNL
Sbjct: 130 LSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQSGGNL 181
>ref|XP_004145640.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Cucumis
sativus] gi|449484535|ref|XP_004156909.1| PREDICTED: 30S
ribosomal protein 3, chloroplastic-like [Cucumis
sativus]
Length = 192
Score = 189 bits (480), Expect = 1e-45
Identities = 91/101 (90%), Positives = 94/101 (93%)
Frame = +2
Query: 344 VSSPAVEKQKLGVVVKPTDKPRLVLKFIWMEKNIGLGLDQAIPGHGTIPLSPYYFWPRKD 523
VSSP K+KLGVVVKP +KPRLVLKFIWMEKNIG+ LDQ IPGHGTIPLSPYYFWPRKD
Sbjct: 93 VSSPV--KEKLGVVVKPMEKPRLVLKFIWMEKNIGIALDQMIPGHGTIPLSPYYFWPRKD 150
Query: 524 AWEELKVLLESKPWISQKQMIILLNQATDIINLWQQAGGNL 646
AWEELKVLLESKPWISQKQMIILLNQATDIINLWQQ GGNL
Sbjct: 151 AWEELKVLLESKPWISQKQMIILLNQATDIINLWQQGGGNL 191
>gb|EMJ17195.1| hypothetical protein PRUPE_ppa011873mg [Prunus persica]
Length = 192
Score = 188 bits (477), Expect = 3e-45
Identities = 87/96 (90%), Positives = 93/96 (96%)
Frame = +2
Query: 359 VEKQKLGVVVKPTDKPRLVLKFIWMEKNIGLGLDQAIPGHGTIPLSPYYFWPRKDAWEEL 538
+EK+KLGVVVKP +KPRLVLKFIWMEKNIG+ LDQ IPGHG+IPLSPYYFWPRKDAWEEL
Sbjct: 96 LEKEKLGVVVKPIEKPRLVLKFIWMEKNIGIALDQMIPGHGSIPLSPYYFWPRKDAWEEL 155
Query: 539 KVLLESKPWISQKQMIILLNQATDIINLWQQAGGNL 646
KVLLESKPWISQKQMIILLNQATDIINLWQQ+GGNL
Sbjct: 156 KVLLESKPWISQKQMIILLNQATDIINLWQQSGGNL 191
>ref|XP_004234566.1| PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Solanum
lycopersicum]
Length = 176
Score = 187 bits (474), Expect = 7e-45
Identities = 85/101 (84%), Positives = 96/101 (95%)
Frame = +2
Query: 344 VSSPAVEKQKLGVVVKPTDKPRLVLKFIWMEKNIGLGLDQAIPGHGTIPLSPYYFWPRKD 523
+SS +++K+KLGV+VKP +KPRLVLKFIWMEKNIG+ LDQ IPGHGTIPLSPYYFWPRKD
Sbjct: 75 ISSDSLQKEKLGVLVKPLEKPRLVLKFIWMEKNIGISLDQVIPGHGTIPLSPYYFWPRKD 134
Query: 524 AWEELKVLLESKPWISQKQMIILLNQATDIINLWQQAGGNL 646
AWEELKV+LESKPWISQKQ IILLNQATDIINLWQQ+GG+L
Sbjct: 135 AWEELKVMLESKPWISQKQAIILLNQATDIINLWQQSGGDL 175
>ref|NP_001236243.1| uncharacterized protein LOC100306266 [Glycine max]
gi|255628049|gb|ACU14369.1| unknown [Glycine max]
Length = 158
Score = 186 bits (472), Expect = 1e-44
Identities = 85/98 (86%), Positives = 92/98 (93%)
Frame = +2
Query: 353 PAVEKQKLGVVVKPTDKPRLVLKFIWMEKNIGLGLDQAIPGHGTIPLSPYYFWPRKDAWE 532
P + +KLGVVVKPT+KPRLVLKFIWMEKNIG+ LDQ +PGHGTIPLSPYYFWPRKDAWE
Sbjct: 60 PTPQPEKLGVVVKPTEKPRLVLKFIWMEKNIGIALDQMVPGHGTIPLSPYYFWPRKDAWE 119
Query: 533 ELKVLLESKPWISQKQMIILLNQATDIINLWQQAGGNL 646
ELK LLE+KPWISQKQMIILLNQATDIINLWQQ+GGNL
Sbjct: 120 ELKELLENKPWISQKQMIILLNQATDIINLWQQSGGNL 157
>gb|ESW11139.1| hypothetical protein PHAVU_008G005100g [Phaseolus vulgaris]
Length = 164
Score = 184 bits (467), Expect = 4e-44
Identities = 85/98 (86%), Positives = 91/98 (92%)
Frame = +2
Query: 353 PAVEKQKLGVVVKPTDKPRLVLKFIWMEKNIGLGLDQAIPGHGTIPLSPYYFWPRKDAWE 532
P + +KLGVVVK T+KPR+VLKFIWMEKNIG+ LDQ IPGHGTIPLSPYYFWPRKDAWE
Sbjct: 66 PTPQPEKLGVVVKATEKPRIVLKFIWMEKNIGIALDQTIPGHGTIPLSPYYFWPRKDAWE 125
Query: 533 ELKVLLESKPWISQKQMIILLNQATDIINLWQQAGGNL 646
ELK LLESKPWISQKQMIILLNQATDIINLWQQ+GGNL
Sbjct: 126 ELKELLESKPWISQKQMIILLNQATDIINLWQQSGGNL 163
>ref|XP_002311451.2| hypothetical protein POPTR_0008s11750g [Populus trichocarpa]
gi|550332879|gb|EEE88818.2| hypothetical protein
POPTR_0008s11750g [Populus trichocarpa]
Length = 189
Score = 177 bits (449), Expect = 5e-42
Identities = 103/188 (54%), Positives = 121/188 (64%), Gaps = 14/188 (7%)
Frame = +2
Query: 125 MMSMAVQPTIN---TY--LPQISPNFALKPLKASSSANPRHCHFHSLST-SRLKLHTRRD 286
M+SMA Q +N TY LP +P+ K KA+ S NP+ S + R + H R+
Sbjct: 1 MLSMAFQSGVNNVFTYYSLPCRTPS--CKTFKATISVNPKPNPIRSSTFFDRERRHVSRN 58
Query: 287 -----FAIYXXXXXXXXXXXXXXKV---SSPAVEKQKLGVVVKPTDKPRLVLKFIWMEKN 442
FA+ S P E +K +VVK +KPRLVLKF+WMEKN
Sbjct: 59 QRYTTFAVPEALAAETPADAPPSNAAGESIPIQETEKAELVVKRVEKPRLVLKFVWMEKN 118
Query: 443 IGLGLDQAIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINL 622
IGL LDQ IPGHGT+PLSPY+FWPRKDAWEELK LESKPWISQK+MIILLNQATDIINL
Sbjct: 119 IGLALDQVIPGHGTVPLSPYFFWPRKDAWEELKATLESKPWISQKKMIILLNQATDIINL 178
Query: 623 WQQAGGNL 646
WQQ+GGNL
Sbjct: 179 WQQSGGNL 186
>ref|XP_002315948.2| hypothetical protein POPTR_0010s13740g [Populus trichocarpa]
gi|550329750|gb|EEF02119.2| hypothetical protein
POPTR_0010s13740g [Populus trichocarpa]
Length = 189
Score = 177 bits (449), Expect = 5e-42
Identities = 95/173 (54%), Positives = 113/173 (65%), Gaps = 9/173 (5%)
Frame = +2
Query: 155 NTYLPQISPNFALKPLKASSSANPRHCHFHS---LSTSRLKLHTRRDFAIYXXXXXXXXX 325
N+ LP +P+ K KA+ S NP+ HS L R ++ + + +
Sbjct: 16 NSSLPCQTPS--CKTFKATFSTNPKPNLIHSSTFLDRKRKRVSRNQRYTTFAAPEALTVE 73
Query: 326 XXXXXKVSS------PAVEKQKLGVVVKPTDKPRLVLKFIWMEKNIGLGLDQAIPGHGTI 487
S+ P E +K V+VK +KPRLVLKFIWMEKNIGL LDQ IPGHGT+
Sbjct: 74 TPIDTPPSTETEESIPTQETEKAEVLVKQVEKPRLVLKFIWMEKNIGLALDQVIPGHGTV 133
Query: 488 PLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQAGGNL 646
PLSPY+FWPRKDAWEELK LESKPWISQK+MIILLNQATDIINLWQQ+GGNL
Sbjct: 134 PLSPYFFWPRKDAWEELKATLESKPWISQKKMIILLNQATDIINLWQQSGGNL 186
>gb|EOY04215.1| Ribosomal protein PSRP-3/Ycf65 [Theobroma cacao]
Length = 199
Score = 175 bits (443), Expect = 3e-41
Identities = 100/190 (52%), Positives = 119/190 (62%), Gaps = 5/190 (2%)
Frame = +2
Query: 92 PVLTFFPLSFRMMS--MAVQPTINTYLPQISPNFALKPLKASSSANPRHCHFHSLSTSRL 265
P L+ PL ++++ M V ++ TYL P F KPL + S NP L+ S
Sbjct: 14 PWLSDSPLKLKILTKKMLVTTSLQTYL---KPPF--KPLTSFPSQNPTLFLLKPLTVSPK 68
Query: 266 KLHTRRDFAIYXXXXXXXXXXXXXXKVSSPAVE---KQKLGVVVKPTDKPRLVLKFIWME 436
+ + SP+ K+KLGVVVKP +KPR+VLKFIWME
Sbjct: 69 TSNLAKPIISPQVKAKAQVLSDELPLDDSPSESSSYKEKLGVVVKPLEKPRVVLKFIWME 128
Query: 437 KNIGLGLDQAIPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDII 616
K+IG+ LDQ IPGHGTIPLSPYYFWPRKDAWEELKVLLE+KPWIS Q I LLNQATDII
Sbjct: 129 KDIGIALDQVIPGHGTIPLSPYYFWPRKDAWEELKVLLENKPWISHMQRIHLLNQATDII 188
Query: 617 NLWQQAGGNL 646
NLWQ +GGNL
Sbjct: 189 NLWQTSGGNL 198
>gb|EOY02101.1| Ribosomal protein PSRP-3/Ycf65 [Theobroma cacao]
Length = 181
Score = 172 bits (435), Expect = 2e-40
Identities = 82/100 (82%), Positives = 88/100 (88%)
Frame = +2
Query: 347 SSPAVEKQKLGVVVKPTDKPRLVLKFIWMEKNIGLGLDQAIPGHGTIPLSPYYFWPRKDA 526
+SP EK VVVK +K RLVLKFIWMEKNIGLGLDQ IPGHGT+PLSPY+FWPRKDA
Sbjct: 85 TSPETEK----VVVKQVEKSRLVLKFIWMEKNIGLGLDQVIPGHGTVPLSPYFFWPRKDA 140
Query: 527 WEELKVLLESKPWISQKQMIILLNQATDIINLWQQAGGNL 646
WEELK LESKPWISQK+MIILLNQATDIINLWQQ+GGNL
Sbjct: 141 WEELKATLESKPWISQKKMIILLNQATDIINLWQQSGGNL 180
>ref|XP_002529130.1| Plastid-specific 30S ribosomal protein 3, chloroplast precursor,
putative [Ricinus communis] gi|223531409|gb|EEF33243.1|
Plastid-specific 30S ribosomal protein 3, chloroplast
precursor, putative [Ricinus communis]
Length = 180
Score = 172 bits (435), Expect = 2e-40
Identities = 98/180 (54%), Positives = 115/180 (63%), Gaps = 9/180 (5%)
Frame = +2
Query: 134 MAVQPTIN---TYLPQISPNFALKPLKASSSANPRHCHFHSLSTSRLKLH--TRRD---- 286
MA+Q ++ TY P K +K S ANP+ +S + K+ +R +
Sbjct: 1 MAIQSGVSSILTYSPVPHRTPFCKSIKTSIFANPKISLLYSSTILDPKMRPISRNERLTT 60
Query: 287 FAIYXXXXXXXXXXXXXXKVSSPAVEKQKLGVVVKPTDKPRLVLKFIWMEKNIGLGLDQA 466
FA +S +EK + V VK +KPRLVLKFIWMEKNIGL LDQ
Sbjct: 61 FASPEALTVEDKTSETEEPISDDIIEKVE--VAVKQVEKPRLVLKFIWMEKNIGLALDQV 118
Query: 467 IPGHGTIPLSPYYFWPRKDAWEELKVLLESKPWISQKQMIILLNQATDIINLWQQAGGNL 646
IPGHGTIPLSPY+FWPRKDAWEELK LESKPWISQK+MIILLNQATDIINLWQQ+GGNL
Sbjct: 119 IPGHGTIPLSPYFFWPRKDAWEELKTTLESKPWISQKKMIILLNQATDIINLWQQSGGNL 178