BLASTX nr result
ID: Rheum21_contig00001136
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rheum21_contig00001136
(215 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_005406607.1| PREDICTED: tubulin alpha-1C chain-like [Chin... 98 1e-18
gb|EUB64685.1| Tubulin alpha-1C chain [Echinococcus granulosus] 96 6e-18
gb|EUB56387.1| Tubulin alpha-1C chain [Echinococcus granulosus] 96 6e-18
gb|EXC01144.1| Tubulin alpha chain [Morus notabilis] 95 8e-18
gb|EXB54386.1| Tubulin alpha chain [Morus notabilis] 95 8e-18
ref|NP_171974.1| tubulin alpha-4 chain [Arabidopsis thaliana] gi... 95 8e-18
ref|XP_006601463.1| PREDICTED: tubulin alpha-3 chain-like [Glyci... 95 8e-18
ref|XP_006581475.1| PREDICTED: tubulin alpha-4 chain-like isofor... 95 8e-18
ref|XP_006579968.1| PREDICTED: tubulin alpha-3 chain-like isofor... 95 8e-18
ref|XP_006578253.1| PREDICTED: tubulin alpha-4 chain isoform X2 ... 95 8e-18
ref|XP_006486879.1| PREDICTED: tubulin alpha chain-like isoform ... 95 8e-18
gb|ESW27778.1| hypothetical protein PHAVU_003G231500g [Phaseolus... 95 8e-18
gb|ESW09275.1| hypothetical protein PHAVU_009G114100g [Phaseolus... 95 8e-18
ref|XP_006422747.1| hypothetical protein CICLE_v10028426mg [Citr... 95 8e-18
ref|XP_006404742.1| hypothetical protein EUTSA_v10000161mg [Eutr... 95 8e-18
gb|AGV54441.1| tubulin alpha-2 chain-like protein [Phaseolus vul... 95 8e-18
gb|ERE66527.1| tubulin alpha-3 chain-like protein [Cricetulus gr... 95 8e-18
gb|ERE66526.1| tubulin alpha-3 chain-like protein [Cricetulus gr... 95 8e-18
gb|EPQ18458.1| Tubulin alpha-1D chain [Myotis brandtii] 95 8e-18
gb|EOY15594.1| Tubulin alpha-2 chain [Theobroma cacao] 95 8e-18
>ref|XP_005406607.1| PREDICTED: tubulin alpha-1C chain-like [Chinchilla lanigera]
Length = 434
Score = 98.2 bits (243), Expect = 1e-18
Identities = 40/48 (83%), Positives = 45/48 (93%)
Frame = +1
Query: 70 FFSLPKMRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV 213
FF LP RECISIH+GQAG+Q+GNACWELYCLEHGIQPDG+MPSDKT+
Sbjct: 85 FFCLPPQRECISIHVGQAGVQIGNACWELYCLEHGIQPDGKMPSDKTI 132
>gb|EUB64685.1| Tubulin alpha-1C chain [Echinococcus granulosus]
Length = 505
Score = 95.5 bits (236), Expect = 6e-18
Identities = 42/61 (68%), Positives = 50/61 (81%)
Frame = +1
Query: 31 FAFGYFLPSPNSRFFSLPKMRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKT 210
F FG P P+ + ++RECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT
Sbjct: 40 FRFGADQPYPSGLY----QLRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKT 95
Query: 211 V 213
+
Sbjct: 96 I 96
>gb|EUB56387.1| Tubulin alpha-1C chain [Echinococcus granulosus]
Length = 1453
Score = 95.5 bits (236), Expect = 6e-18
Identities = 43/56 (76%), Positives = 49/56 (87%), Gaps = 5/56 (8%)
Frame = +1
Query: 61 NSRFFSLP-----KMRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV 213
+S F SLP KMRECISIH+GQAG+Q+GNACWELYCLEHGIQP+GQMPSDKT+
Sbjct: 990 HSLFVSLPFAAFSKMRECISIHVGQAGVQMGNACWELYCLEHGIQPNGQMPSDKTI 1045
>gb|EXC01144.1| Tubulin alpha chain [Morus notabilis]
Length = 448
Score = 95.1 bits (235), Expect = 8e-18
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 88 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV 213
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV 42
>gb|EXB54386.1| Tubulin alpha chain [Morus notabilis]
Length = 451
Score = 95.1 bits (235), Expect = 8e-18
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 88 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV 213
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV 42
>ref|NP_171974.1| tubulin alpha-4 chain [Arabidopsis thaliana]
gi|15222856|ref|NP_175423.1| tubulin alpha-2 chain
[Arabidopsis thaliana] gi|297791421|ref|XP_002863595.1|
tubulin alpha-2/alpha-4 chain [Arabidopsis lyrata subsp.
lyrata] gi|297847340|ref|XP_002891551.1| tubulin
alpha-2/alpha-4 chain [Arabidopsis lyrata subsp. lyrata]
gi|565421929|ref|XP_006279139.1| hypothetical protein
CARUB_v10008014mg [Capsella rubella]
gi|567133282|ref|XP_006393188.1| hypothetical protein
EUTSA_v10011471mg [Eutrema salsugineum]
gi|567197095|ref|XP_006406473.1| hypothetical protein
EUTSA_v10020718mg [Eutrema salsugineum]
gi|408387609|sp|B9DGT7.2|TBA2_ARATH RecName:
Full=Tubulin alpha-2 chain
gi|408407917|sp|Q0WV25.2|TBA4_ARATH RecName:
Full=Tubulin alpha-4 chain
gi|7211983|gb|AAF40454.1|AC004809_12 Identical to the
alpha-4 tubulin (TUA4) gene from A. thaliana gb|M84697.
ESTs gb|T46564. gb|T04381, gb|T76028, gb|T21602,
gb|H37154 gb|H37663 and gb|T21719 come from this gene
[Arabidopsis thaliana]
gi|8569104|gb|AAF76449.1|AC015445_16 Identical to
Tubulin Alpha-6 Chain from Arabidopsis thaliana
gi|267070 and contains a Tubulin PF|00091 domain. ESTs
gb|N37387, gb|N37805, gb|R90497, gb|T44684, gb|H36144,
gb|N38686, gb|AI994844, gb|R90689, gb|T04725, gb|H36928,
gb|N96479, gb|H36922, gb|R90670, gb|Z17980, gb|T4428,
gb|H36248, gb|N65408, gb|T46222 come from this gene
[Arabidopsis thaliana]
gi|15294278|gb|AAK95316.1|AF410330_1 At1g50010/F2J10_12
[Arabidopsis thaliana] gi|166914|gb|AAA32889.1| apha-2
tubulin [Arabidopsis thaliana] gi|166916|gb|AAA32890.1|
alpha-4 tubulin [Arabidopsis thaliana]
gi|16648844|gb|AAL25612.1| At1g04820/F13M7_26
[Arabidopsis thaliana] gi|17473673|gb|AAL38293.1|
Tubulin Alpha-6 Chain [Arabidopsis thaliana]
gi|22655354|gb|AAM98269.1| At1g04820/F13M7_26
[Arabidopsis thaliana] gi|23506129|gb|AAN31076.1|
At1g50010/F2J10_12 [Arabidopsis thaliana]
gi|146142523|gb|ABQ01730.1| TUA2 [Eutrema halophilum]
gi|146142525|gb|ABQ01731.1| TUA2-2 [Eutrema halophilum]
gi|297309430|gb|EFH39854.1| tubulin alpha-2/alpha-4
chain [Arabidopsis lyrata subsp. lyrata]
gi|297337393|gb|EFH67810.1| tubulin alpha-2/alpha-4
chain [Arabidopsis lyrata subsp. lyrata]
gi|332189626|gb|AEE27747.1| tubulin alpha-4 chain
[Arabidopsis thaliana] gi|332194386|gb|AEE32507.1|
tubulin alpha-2 chain [Arabidopsis thaliana]
gi|482547704|gb|EOA12037.1| hypothetical protein
CARUB_v10008014mg [Capsella rubella]
gi|557089766|gb|ESQ30474.1| hypothetical protein
EUTSA_v10011471mg [Eutrema salsugineum]
gi|557107619|gb|ESQ47926.1| hypothetical protein
EUTSA_v10020718mg [Eutrema salsugineum]
Length = 450
Score = 95.1 bits (235), Expect = 8e-18
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 88 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV 213
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV 42
>ref|XP_006601463.1| PREDICTED: tubulin alpha-3 chain-like [Glycine max]
Length = 432
Score = 95.1 bits (235), Expect = 8e-18
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 88 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV 213
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV 42
>ref|XP_006581475.1| PREDICTED: tubulin alpha-4 chain-like isoform X2 [Glycine max]
Length = 466
Score = 95.1 bits (235), Expect = 8e-18
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 88 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV 213
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV 42
>ref|XP_006579968.1| PREDICTED: tubulin alpha-3 chain-like isoform X2 [Glycine max]
Length = 462
Score = 95.1 bits (235), Expect = 8e-18
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 88 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV 213
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV 42
>ref|XP_006578253.1| PREDICTED: tubulin alpha-4 chain isoform X2 [Glycine max]
Length = 432
Score = 95.1 bits (235), Expect = 8e-18
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 88 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV 213
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV 42
>ref|XP_006486879.1| PREDICTED: tubulin alpha chain-like isoform X2 [Citrus sinensis]
Length = 433
Score = 95.1 bits (235), Expect = 8e-18
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 88 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV 213
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV 42
>gb|ESW27778.1| hypothetical protein PHAVU_003G231500g [Phaseolus vulgaris]
Length = 450
Score = 95.1 bits (235), Expect = 8e-18
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 88 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV 213
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV 42
>gb|ESW09275.1| hypothetical protein PHAVU_009G114100g [Phaseolus vulgaris]
Length = 451
Score = 95.1 bits (235), Expect = 8e-18
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 88 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV 213
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV 42
>ref|XP_006422747.1| hypothetical protein CICLE_v10028426mg [Citrus clementina]
gi|568867091|ref|XP_006486878.1| PREDICTED: tubulin
alpha chain-like isoform X1 [Citrus sinensis]
gi|557524681|gb|ESR35987.1| hypothetical protein
CICLE_v10028426mg [Citrus clementina]
Length = 450
Score = 95.1 bits (235), Expect = 8e-18
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 88 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV 213
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV 42
>ref|XP_006404742.1| hypothetical protein EUTSA_v10000161mg [Eutrema salsugineum]
gi|557105870|gb|ESQ46195.1| hypothetical protein
EUTSA_v10000161mg [Eutrema salsugineum]
Length = 451
Score = 95.1 bits (235), Expect = 8e-18
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 88 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV 213
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV 42
>gb|AGV54441.1| tubulin alpha-2 chain-like protein [Phaseolus vulgaris]
Length = 448
Score = 95.1 bits (235), Expect = 8e-18
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 88 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV 213
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV 42
>gb|ERE66527.1| tubulin alpha-3 chain-like protein [Cricetulus griseus]
Length = 504
Score = 95.1 bits (235), Expect = 8e-18
Identities = 41/52 (78%), Positives = 45/52 (86%)
Frame = +1
Query: 58 PNSRFFSLPKMRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV 213
P RF P RECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+
Sbjct: 48 PKLRF---PSQRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 96
>gb|ERE66526.1| tubulin alpha-3 chain-like protein [Cricetulus griseus]
Length = 543
Score = 95.1 bits (235), Expect = 8e-18
Identities = 41/52 (78%), Positives = 45/52 (86%)
Frame = +1
Query: 58 PNSRFFSLPKMRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV 213
P RF P RECISIH+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+
Sbjct: 48 PKLRF---PSQRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 96
>gb|EPQ18458.1| Tubulin alpha-1D chain [Myotis brandtii]
Length = 568
Score = 95.1 bits (235), Expect = 8e-18
Identities = 38/44 (86%), Positives = 43/44 (97%)
Frame = +1
Query: 82 PKMRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV 213
P MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMPSDKT+
Sbjct: 115 PLMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTI 158
>gb|EOY15594.1| Tubulin alpha-2 chain [Theobroma cacao]
Length = 451
Score = 95.1 bits (235), Expect = 8e-18
Identities = 42/42 (100%), Positives = 42/42 (100%)
Frame = +1
Query: 88 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV 213
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTV 42