BLASTX nr result

ID: Rehmannia32_contig00028636 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00028636
         (525 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN18383.1| putative E3 ubiquitin ligase [Handroanthus impeti...    91   8e-20
ref|XP_011099345.1| RNA-binding protein MEX3B [Sesamum indicum]        79   3e-15
ref|XP_011099344.1| death-associated inhibitor of apoptosis 1-li...    71   3e-12
ref|XP_012856337.1| PREDICTED: RNA-binding protein MEX3B isoform...    70   9e-12
ref|XP_012856345.1| PREDICTED: RNA-binding protein MEX3B isoform...    69   2e-11
ref|XP_020554978.1| death-associated inhibitor of apoptosis 1-li...    63   2e-09
ref|XP_012856354.1| PREDICTED: RNA-binding protein MEX3B isoform...    58   2e-07
gb|PIN18384.1| putative E3 ubiquitin ligase [Handroanthus impeti...    57   7e-07
emb|CDP02557.1| unnamed protein product [Coffea canephora]             57   1e-06

>gb|PIN18383.1| putative E3 ubiquitin ligase [Handroanthus impetiginosus]
          Length = 168

 Score = 90.9 bits (224), Expect = 8e-20
 Identities = 57/96 (59%), Positives = 65/96 (67%), Gaps = 1/96 (1%)
 Frame = +3

Query: 195 MNQYAAMATITFKNDDDAGGLNQLSLDFPTGLVVYA-IIGILLMVIALIVKLLWNIDGDE 371
           MNQY    TITFK+ DD     +LS D     V YA I+ ILLM+I LIVKLL +IDG+E
Sbjct: 1   MNQYTV--TITFKHGDDEVRGTELSADTAANFVFYAAIVVILLMIITLIVKLLRDIDGNE 58

Query: 372 GGGENPTATENSGLLSAKEEVLFSYYGSITSEEDLE 479
            G    TATENSGLLS+K E LFS YG  TS+EDLE
Sbjct: 59  SGAGETTATENSGLLSSKVESLFSTYG--TSDEDLE 92


>ref|XP_011099345.1| RNA-binding protein MEX3B [Sesamum indicum]
          Length = 155

 Score = 78.6 bits (192), Expect = 3e-15
 Identities = 50/105 (47%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
 Frame = +3

Query: 222 ITFKNDDDAGGLNQLSLDFPTGLVVYAIIGI-LLMVIALIVKLLWNIDGDEGGGENPTAT 398
           +T  +++D  G    ++DFPT  V Y  I +  +MV  LIVKL+WN +GDE  GE  T T
Sbjct: 1   MTSDSEEDVWG--STTVDFPTDFVFYGAITVTFVMVAVLIVKLMWNCEGDE--GEASTVT 56

Query: 399 ENSGLLSA---KEEVLFSYYGSITSEEDLEXXXXXXXXXXEDLYD 524
           ENSGLLS    KEEV +S YG  T+EEDLE          +DLYD
Sbjct: 57  ENSGLLSTSSPKEEVFYSTYG--TTEEDLESGKGSCCSSSDDLYD 99


>ref|XP_011099344.1| death-associated inhibitor of apoptosis 1-like isoform X1 [Sesamum
           indicum]
          Length = 171

 Score = 71.2 bits (173), Expect = 3e-12
 Identities = 52/120 (43%), Positives = 71/120 (59%), Gaps = 4/120 (3%)
 Frame = +3

Query: 177 TANTREMNQYAAMATITFKN-DDDAGGLNQLSLDFPTGLVVYA-IIGILLMVIALIVKLL 350
           TA+   +NQ+    T+ F + DD+  G   + +++   + +YA +  + LMVIALIVKL+
Sbjct: 4   TASPGGLNQFPV--TLAFDHRDDEVLGEGHVVVEYAMRMAIYAGLTAVFLMVIALIVKLM 61

Query: 351 WNIDGDE--GGGENPTATENSGLLSAKEEVLFSYYGSITSEEDLEXXXXXXXXXXEDLYD 524
           W+ D +E   GGE   ATENS LLS KEE +F+ YG  TS EDLE          EDLYD
Sbjct: 62  WSCDEEEAGAGGEAARATENSRLLS-KEEAVFTSYG--TSGEDLE---SGSSSSCEDLYD 115


>ref|XP_012856337.1| PREDICTED: RNA-binding protein MEX3B isoform X1 [Erythranthe
           guttata]
          Length = 162

 Score = 69.7 bits (169), Expect = 9e-12
 Identities = 50/91 (54%), Positives = 59/91 (64%), Gaps = 2/91 (2%)
 Frame = +3

Query: 213 MATITFKNDDDAGGLNQLSLDFPTGLVVYA-IIGILLMVIALIVKLLWNIDGDEGGGENP 389
           M T   ++DDD         + P  +V YA II IL+M+IALIVKLLWN + D G GE  
Sbjct: 1   MGTWVDQDDDDE--------ETPLSIVFYAPIIAILVMIIALIVKLLWNWNEDGGYGEE- 51

Query: 390 TATENSGLLSAK-EEVLFSYYGSITSEEDLE 479
            ATE+SGLLS K EE L+S YG  TSEEDLE
Sbjct: 52  -ATESSGLLSYKDEESLYSSYG--TSEEDLE 79


>ref|XP_012856345.1| PREDICTED: RNA-binding protein MEX3B isoform X2 [Erythranthe
           guttata]
 gb|EYU44457.1| hypothetical protein MIMGU_mgv1a015305mg [Erythranthe guttata]
          Length = 161

 Score = 68.9 bits (167), Expect = 2e-11
 Identities = 49/87 (56%), Positives = 58/87 (66%), Gaps = 2/87 (2%)
 Frame = +3

Query: 225 TFKNDDDAGGLNQLSLDFPTGLVVYA-IIGILLMVIALIVKLLWNIDGDEGGGENPTATE 401
           T+ +DDD         + P  +V YA II IL+M+IALIVKLLWN + D G GE   ATE
Sbjct: 3   TWVDDDD-------DEETPLSIVFYAPIIAILVMIIALIVKLLWNWNEDGGYGEE--ATE 53

Query: 402 NSGLLSAK-EEVLFSYYGSITSEEDLE 479
           +SGLLS K EE L+S YG  TSEEDLE
Sbjct: 54  SSGLLSYKDEESLYSSYG--TSEEDLE 78


>ref|XP_020554978.1| death-associated inhibitor of apoptosis 1-like isoform X2 [Sesamum
           indicum]
          Length = 149

 Score = 63.2 bits (152), Expect = 2e-09
 Identities = 41/77 (53%), Positives = 50/77 (64%), Gaps = 2/77 (2%)
 Frame = +3

Query: 300 AIIGILLMVIALIVKLLWNIDGDE--GGGENPTATENSGLLSAKEEVLFSYYGSITSEED 473
           +++ + LMVIALIVKL+W+ D +E   GGE   ATENS LLS KEE +F+ YG  TS ED
Sbjct: 23  SLVSVFLMVIALIVKLMWSCDEEEAGAGGEAARATENSRLLS-KEEAVFTSYG--TSGED 79

Query: 474 LEXXXXXXXXXXEDLYD 524
           LE          EDLYD
Sbjct: 80  LE---SGSSSSCEDLYD 93


>ref|XP_012856354.1| PREDICTED: RNA-binding protein MEX3B isoform X3 [Erythranthe
           guttata]
          Length = 133

 Score = 57.8 bits (138), Expect = 2e-07
 Identities = 37/54 (68%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
 Frame = +3

Query: 321 MVIALIVKLLWNIDGDEGGGENPTATENSGLLSAK-EEVLFSYYGSITSEEDLE 479
           M+IALIVKLLWN + D G GE   ATE+SGLLS K EE L+S YG  TSEEDLE
Sbjct: 1   MIIALIVKLLWNWNEDGGYGEE--ATESSGLLSYKDEESLYSSYG--TSEEDLE 50


>gb|PIN18384.1| putative E3 ubiquitin ligase [Handroanthus impetiginosus]
          Length = 157

 Score = 56.6 bits (135), Expect = 7e-07
 Identities = 38/96 (39%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
 Frame = +3

Query: 198 NQYAAMATITFKNDDDAGGLNQLSLDFPTGLVVYAII-GILLMVIALIVKLLWNIDGDEG 374
           NQ+A +  +  + ++ +     + +D+   L  YA +  I LMVIAL+VKL+WN DG++ 
Sbjct: 3   NQFAVIVEVQKEGEETS-----VLVDYAMHLAFYAALTAIFLMVIALVVKLMWNCDGED- 56

Query: 375 GGENPT-ATENSGLLSAKEEVLFSYYGSITSEEDLE 479
              +PT A ENS L  +KEEV   Y    T+E+DLE
Sbjct: 57  -ASSPTRANENSRLFLSKEEVAVGYG---TNEKDLE 88


>emb|CDP02557.1| unnamed protein product [Coffea canephora]
          Length = 184

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 43/126 (34%), Positives = 60/126 (47%), Gaps = 10/126 (7%)
 Frame = +3

Query: 177 TANTREMNQYAAMATITFKNDDDAGGLNQLSLDFPTGLVVY-AIIGILLMVIALIVKLLW 353
           T    E++       I     DD      ++L F + +V+Y AI+ +L+M++ALI+KLL 
Sbjct: 7   TTPASELHMMTNSRAILITTHDDEQSEWSIALAFASRIVIYVAILALLMMIVALIIKLLG 66

Query: 354 NIDGDEGGGENP---------TATENSGLLSAKEEVLFSYYGSITSEEDLEXXXXXXXXX 506
             DGD     +           ATE + LL AKE V F+Y    T EEDLE         
Sbjct: 67  QCDGDASSSSSSIHRQATAARAATETNTLL-AKEVVPFTYG---TCEEDLESAKCSSSPS 122

Query: 507 XEDLYD 524
            +DLYD
Sbjct: 123 DDDLYD 128


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