BLASTX nr result

ID: Rehmannia32_contig00028454 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00028454
         (361 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_009792121.1| PREDICTED: F-box protein At5g03970-like [Nic...    59   1e-07
gb|PIN16634.1| hypothetical protein CDL12_10725 [Handroanthus im...    58   2e-07
ref|XP_019232500.1| PREDICTED: F-box protein At5g03970-like [Nic...    58   2e-07
ref|XP_016473064.1| PREDICTED: F-box protein At5g03970-like isof...    57   6e-07
ref|XP_016473062.1| PREDICTED: F-box protein At5g03970-like isof...    57   6e-07
ref|XP_016473063.1| PREDICTED: F-box protein At5g03970-like isof...    56   1e-06
ref|XP_009626188.1| PREDICTED: F-box protein At5g03970-like isof...    56   1e-06
ref|XP_018633414.1| PREDICTED: F-box protein At5g03970-like isof...    56   1e-06

>ref|XP_009792121.1| PREDICTED: F-box protein At5g03970-like [Nicotiana sylvestris]
 ref|XP_009792122.1| PREDICTED: F-box protein At5g03970-like [Nicotiana sylvestris]
 ref|XP_016500607.1| PREDICTED: F-box protein At5g03970-like [Nicotiana tabacum]
          Length = 421

 Score = 58.9 bits (141), Expect = 1e-07
 Identities = 40/108 (37%), Positives = 62/108 (57%), Gaps = 5/108 (4%)
 Frame = -3

Query: 311 MEQFDVDLDVETSDFEELHYYYAMDNEKENFC-KATESLFHVKEIGSSSTDSDDGFVK-- 141
           ME  +   D+ T +++        DN  +N   K  +++    ++ SS+T    G ++  
Sbjct: 1   MEFSETGYDIATDEWDN----NIPDNWDDNIPDKWDDNILDTFKVFSSATKPQKGGLRLF 56

Query: 140 -DAQYRA-YQMVEDLVPPFTRKKEDMELKDVVEENVLPFLPAKSLLRF 3
            D  + A YQM E+  P    +KEDM+LKDVV+E+VLPFLPAKSL++F
Sbjct: 57  ADYDFTATYQMEEEKFPAHIIRKEDMKLKDVVKEHVLPFLPAKSLMKF 104


>gb|PIN16634.1| hypothetical protein CDL12_10725 [Handroanthus impetiginosus]
          Length = 405

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
 Frame = -3

Query: 311 MEQFDVDLDVETSDFEELHYYYAMDNEKENFCKATES-LFHVKEIGSSSTDSDDGFVKDA 135
           ME FD   +  +  FE    ++ + +E+E +     S  F      +++  + D F    
Sbjct: 1   MEYFD---EGSSEGFESGERHHTVYDEEEGYLSDDVSDTFAQLHFSTATYHNQDNFTS-- 55

Query: 134 QYRAYQMVEDLVPPFTRKKEDMELKDVVEENVLPFLPAKSLLRF 3
                      +PPF RKKEDME+KDVV++NVL +LPAKSL+RF
Sbjct: 56  -----------LPPFVRKKEDMEIKDVVKDNVLRYLPAKSLMRF 88


>ref|XP_019232500.1| PREDICTED: F-box protein At5g03970-like [Nicotiana attenuata]
 gb|OIT27995.1| hypothetical protein A4A49_33609 [Nicotiana attenuata]
          Length = 421

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
 Frame = -3

Query: 239 DNEKENFC-KATESLFHVKEIGSSSTDSDDG---FVKDAQYRA-YQMVEDLVPPFTRKKE 75
           DN  +N   K  +++    ++ SS+T    G      D  + A YQM E+  P    +KE
Sbjct: 21  DNWDDNIPDKWDDNILDTFKVFSSATKPQKGGLHLFADYDFTATYQMEEEKFPAHVMRKE 80

Query: 74  DMELKDVVEENVLPFLPAKSLLRF 3
           DM+LKDVV+E+VLPFLPAKSL++F
Sbjct: 81  DMKLKDVVKEHVLPFLPAKSLMKF 104


>ref|XP_016473064.1| PREDICTED: F-box protein At5g03970-like isoform X3 [Nicotiana
           tabacum]
          Length = 421

 Score = 57.0 bits (136), Expect = 6e-07
 Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
 Frame = -3

Query: 188 KEIGSSSTDSDDGFVKDAQY---RAYQMVEDLVPPFTRKKEDMELKDVVEENVLPFLPAK 18
           K   S++     GF   A Y     YQM E+  P    +KEDM+LKDVV+E+VLPFLPAK
Sbjct: 40  KVFPSATKPQKGGFHLFADYDFTATYQMEEEKFPAHIIRKEDMKLKDVVKEHVLPFLPAK 99

Query: 17  SLLRF 3
           SL++F
Sbjct: 100 SLMKF 104


>ref|XP_016473062.1| PREDICTED: F-box protein At5g03970-like isoform X1 [Nicotiana
           tabacum]
          Length = 423

 Score = 57.0 bits (136), Expect = 6e-07
 Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
 Frame = -3

Query: 188 KEIGSSSTDSDDGFVKDAQY---RAYQMVEDLVPPFTRKKEDMELKDVVEENVLPFLPAK 18
           K   S++     GF   A Y     YQM E+  P    +KEDM+LKDVV+E+VLPFLPAK
Sbjct: 42  KVFPSATKPQKGGFHLFADYDFTATYQMEEEKFPAHIIRKEDMKLKDVVKEHVLPFLPAK 101

Query: 17  SLLRF 3
           SL++F
Sbjct: 102 SLMKF 106


>ref|XP_016473063.1| PREDICTED: F-box protein At5g03970-like isoform X2 [Nicotiana
           tabacum]
          Length = 408

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 26/40 (65%), Positives = 33/40 (82%)
 Frame = -3

Query: 122 YQMVEDLVPPFTRKKEDMELKDVVEENVLPFLPAKSLLRF 3
           YQM E+  P    +KEDM+LKDVV+E+VLPFLPAKSL++F
Sbjct: 52  YQMEEEKFPAHIIRKEDMKLKDVVKEHVLPFLPAKSLMKF 91


>ref|XP_009626188.1| PREDICTED: F-box protein At5g03970-like isoform X2 [Nicotiana
           tomentosiformis]
          Length = 421

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 26/40 (65%), Positives = 33/40 (82%)
 Frame = -3

Query: 122 YQMVEDLVPPFTRKKEDMELKDVVEENVLPFLPAKSLLRF 3
           YQM E+  P    +KEDM+LKDVV+E+VLPFLPAKSL++F
Sbjct: 65  YQMEEEKFPAHIIRKEDMKLKDVVKEHVLPFLPAKSLMKF 104


>ref|XP_018633414.1| PREDICTED: F-box protein At5g03970-like isoform X1 [Nicotiana
           tomentosiformis]
          Length = 423

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 26/40 (65%), Positives = 33/40 (82%)
 Frame = -3

Query: 122 YQMVEDLVPPFTRKKEDMELKDVVEENVLPFLPAKSLLRF 3
           YQM E+  P    +KEDM+LKDVV+E+VLPFLPAKSL++F
Sbjct: 67  YQMEEEKFPAHIIRKEDMKLKDVVKEHVLPFLPAKSLMKF 106


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