BLASTX nr result
ID: Rehmannia32_contig00028412
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia32_contig00028412
(424 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_008992319.1| hypothetical protein Salmi_Mp055 (mitochondr... 112 2e-29
gb|PON97528.1| Ribonuclease H [Trema orientalis] 99 3e-23
gb|PON85873.1| Ribonuclease H [Trema orientalis] 99 2e-22
gb|PON53282.1| Ribonuclease H-like domain containing protein, pa... 93 7e-22
gb|PON97562.1| Ribonuclease H-like domain containing protein [Tr... 89 1e-18
gb|PON60250.1| Ribonuclease H-like domain containing protein, pa... 82 2e-17
gb|PON47283.1| Ribonuclease H, partial [Parasponia andersonii] 84 4e-17
gb|PON37013.1| Ribonuclease H, partial [Trema orientalis] 83 5e-17
gb|POO02039.1| Ribonuclease H, partial [Trema orientalis] 86 5e-17
ref|XP_011465738.1| PREDICTED: uncharacterized protein LOC105351... 86 6e-17
gb|PON58619.1| Ribonuclease H-like domain containing protein [Pa... 81 9e-17
gb|POO03498.1| Ribonuclease H-like domain containing protein [Tr... 79 2e-16
gb|PRQ16567.1| putative ribonuclease H-like domain-containing pr... 80 1e-15
gb|PRQ42881.1| putative ribonuclease H-like domain, reverse tran... 82 2e-15
ref|XP_024190007.1| uncharacterized protein LOC112193973 [Rosa c... 82 2e-15
ref|XP_024164007.1| uncharacterized protein LOC112170981 [Rosa c... 82 3e-15
ref|XP_019430046.1| PREDICTED: uncharacterized protein LOC109337... 76 4e-15
gb|PRQ42072.1| putative RNA-directed DNA polymerase [Rosa chinen... 81 4e-15
dbj|GAU47510.1| hypothetical protein TSUD_367710 [Trifolium subt... 77 4e-15
gb|PON43417.1| Ribonuclease H, partial [Parasponia andersonii] 78 5e-15
>ref|YP_008992319.1| hypothetical protein Salmi_Mp055 (mitochondrion) [Salvia
miltiorrhiza]
gb|AGU16584.1| hypothetical protein Salmi_Mp055 (mitochondrion) [Salvia
miltiorrhiza]
Length = 119
Score = 112 bits (281), Expect = 2e-29
Identities = 50/98 (51%), Positives = 65/98 (66%)
Frame = +3
Query: 9 FAKGWTQLWLEPDSIYVVDLLHKRSVVVLWRHLSRWRYTLHLLSQMDLVVSHIYREGNQV 188
F+KGW LW+E DSIYVV LL RS++V W H +RW YTLHL+ QM++VV+HI+REGN V
Sbjct: 20 FSKGWHSLWIESDSIYVVSLLRSRSMIVPWNHRNRWLYTLHLIRQMNIVVTHIFREGNHV 79
Query: 189 ADILSKKSQSATWWGVPPADIKQFLTEDYVGQSNYRFV 302
AD L+ + WW P I + D G S +RF+
Sbjct: 80 ADALANAAGDLKWWNSMPDFISSAVYRDIAGVSFFRFI 117
>gb|PON97528.1| Ribonuclease H [Trema orientalis]
Length = 196
Score = 99.4 bits (246), Expect = 3e-23
Identities = 48/102 (47%), Positives = 67/102 (65%), Gaps = 3/102 (2%)
Frame = +3
Query: 3 YTFAKGWTQLWLEPDSIYVVDLLHKRSVVVLWRHLSRWRYTLHLLSQMDLVVSHIYREGN 182
Y + GWT LWLE DS+Y+V LL RS V WR S W + +S+M+ VSHI+REGN
Sbjct: 94 YAYDFGWTNLWLECDSLYLVTLLRTRSSYVPWRWKSSWLRCIERISKMNFRVSHIFREGN 153
Query: 183 QVADILSKKS---QSATWWGVPPADIKQFLTEDYVGQSNYRF 299
VADIL+ ++ Q++TWW P+ I+ +DY+G+S +RF
Sbjct: 154 GVADILASRATSFQTSTWWHSTPSFIQDAFAKDYMGRSAFRF 195
>gb|PON85873.1| Ribonuclease H [Trema orientalis]
Length = 302
Score = 99.4 bits (246), Expect = 2e-22
Identities = 48/102 (47%), Positives = 67/102 (65%), Gaps = 3/102 (2%)
Frame = +3
Query: 3 YTFAKGWTQLWLEPDSIYVVDLLHKRSVVVLWRHLSRWRYTLHLLSQMDLVVSHIYREGN 182
Y + GWT LWLE DS+Y+V LL RS V WR S W + +S+M+ VSHI+REGN
Sbjct: 200 YAYDFGWTNLWLECDSLYLVTLLRTRSSYVPWRWKSSWLRCIERISKMNFRVSHIFREGN 259
Query: 183 QVADILSKKS---QSATWWGVPPADIKQFLTEDYVGQSNYRF 299
VADIL+ ++ Q++TWW P+ I+ +DY+G+S +RF
Sbjct: 260 GVADILASRATSFQTSTWWHSTPSFIQDAFAKDYMGRSAFRF 301
>gb|PON53282.1| Ribonuclease H-like domain containing protein, partial [Trema
orientalis]
Length = 111
Score = 93.2 bits (230), Expect = 7e-22
Identities = 47/102 (46%), Positives = 63/102 (61%), Gaps = 3/102 (2%)
Frame = +3
Query: 3 YTFAKGWTQLWLEPDSIYVVDLLHKRSVVVLWRHLSRWRYTLHLLSQMDLVVSHIYREGN 182
Y GWT LWLE DS Y+V LL RS V WR W + +S M+ VSHI+REGN
Sbjct: 9 YAHDFGWTNLWLECDSSYLVTLLRARSPSVPWRWKPAWLRCIDRISNMNFHVSHIFREGN 68
Query: 183 QVADILSKKS---QSATWWGVPPADIKQFLTEDYVGQSNYRF 299
VADIL+ ++ Q++TWW P+ I+ + D++GQS +RF
Sbjct: 69 TVADILASRATSFQTSTWWHSTPSFIQDAFSTDFMGQSAFRF 110
>gb|PON97562.1| Ribonuclease H-like domain containing protein [Trema orientalis]
Length = 290
Score = 89.4 bits (220), Expect = 1e-18
Identities = 42/98 (42%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Frame = +3
Query: 9 FAKGWTQLWLEPDSIYVVDLLHKRSVVVLWRHLSRWRYTLHLLSQMDLVVSHIYREGNQV 188
F GW + W+E DS YVV LL RS +V W H +RW + LH++ + + VSHIYRE NQV
Sbjct: 192 FVCGWHRFWIESDSTYVVGLLKSRSKLVPWNHRNRWLHVLHMVHSIQIYVSHIYRERNQV 251
Query: 189 ADILSKKS-QSATWWGVPPADIKQFLTEDYVGQSNYRF 299
D L+ + + WW P IK + D+ G Y F
Sbjct: 252 VDSLAFVTLEDNQWWSYAPDFIKSLVFRDFYGLDYYHF 289
>gb|PON60250.1| Ribonuclease H-like domain containing protein, partial [Parasponia
andersonii]
Length = 137
Score = 82.4 bits (202), Expect = 2e-17
Identities = 41/102 (40%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Frame = +3
Query: 3 YTFAKGWTQLWLEPDSIYVVDLLHKRSVVVLWRHLSRWRYTLHLLSQMDLVVSHIYREGN 182
Y + GW LWLE D Y+V +L S+ V WR W L L+S++ VSH++ EGN
Sbjct: 35 YAWDLGWNNLWLESDLAYLVLILKSHSLSVPWRWRPSWMRCLRLISKIHFHVSHVFCEGN 94
Query: 183 QVADILSKKS---QSATWWGVPPADIKQFLTEDYVGQSNYRF 299
V DIL ++ Q+ TWW P+ I + +DY G YRF
Sbjct: 95 VVVDILVSRATSIQAPTWWHTAPSFIHDVIKKDYSGLCGYRF 136
>gb|PON47283.1| Ribonuclease H, partial [Parasponia andersonii]
Length = 204
Score = 83.6 bits (205), Expect = 4e-17
Identities = 43/103 (41%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Frame = +3
Query: 3 YTFAKGWTQLWLEPDSIYVVDLLHKRSVVVLWRHLSRWRYTLHLLSQMDLVVSHIYREGN 182
+ + GW LWLE DS+Y+V LL RS+ V +R S W TL ++ M VV+HIYREGN
Sbjct: 103 FAWKYGWKHLWLENDSVYIVSLLLARSLKVPFRWKSTWCRTLRYITNMKFVVTHIYREGN 162
Query: 183 QVADILSKKSQSAT----WWGVPPADIKQFLTEDYVGQSNYRF 299
+ D LS + S WW F+ +DY+ + NYRF
Sbjct: 163 RHTDSLSSRIPSFVSPIWWWSA--TSFSFFVNDDYIAKFNYRF 203
>gb|PON37013.1| Ribonuclease H, partial [Trema orientalis]
Length = 179
Score = 82.8 bits (203), Expect = 5e-17
Identities = 42/102 (41%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Frame = +3
Query: 3 YTFAKGWTQLWLEPDSIYVVDLLHKRSVVVLWRHLSRWRYTLHLLSQMDLVVSHIYREGN 182
Y++ GW LWLE DS Y+V LL S V WR W + +S+M+ VSHI+REGN
Sbjct: 77 YSWDFGWKNLWLESDSSYLVTLLKAHSPSVPWRWKPSWLRCIDRISKMNFHVSHIFREGN 136
Query: 183 QVADILSKKS---QSATWWGVPPADIKQFLTEDYVGQSNYRF 299
VA +L+ + Q+ TWW P+ I++ +DY G+ N+ F
Sbjct: 137 SVAVLLASGATSIQAPTWWHHTPSFIQEAFYKDYSGRCNFHF 178
>gb|POO02039.1| Ribonuclease H, partial [Trema orientalis]
Length = 362
Score = 85.9 bits (211), Expect = 5e-17
Identities = 42/95 (44%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Frame = +3
Query: 3 YTFAKGWTQLWLEPDSIYVVDLLHKRSVVVLWRHLSRWRYTLHLLSQMDLVVSHIYREGN 182
Y + GWT LWLE DS Y+V LL +RS V WR W + +S+M+ VSHI+REGN
Sbjct: 241 YAYEFGWTNLWLECDSTYLVTLLRERSPSVPWRWKPSWLRCMERISRMNFRVSHIFREGN 300
Query: 183 QVADILSKKS---QSATWWGVPPADIKQFLTEDYV 278
VADI + ++ Q++TWW P+ I+ ++DY+
Sbjct: 301 AVADISASRASSFQTSTWWHSIPSFIQNAFSKDYM 335
>ref|XP_011465738.1| PREDICTED: uncharacterized protein LOC105351869 [Fragaria vesca
subsp. vesca]
Length = 348
Score = 85.5 bits (210), Expect = 6e-17
Identities = 43/98 (43%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Frame = +3
Query: 15 KGWTQLWLEPDSIYVVDLLHKRSVVVLWRHLSRWRYTLHLLSQMDLVVSHIYREGNQVAD 194
KGW LWLE DS+ VV RS W RW L ++ QM+ SHI+REGN VAD
Sbjct: 250 KGWVYLWLESDSVSVVACFSSRSFSPPWNLRVRWNNCLSIIRQMNFRYSHIFREGNMVAD 309
Query: 195 ILSK---KSQSATWWGVPPADIKQFLTEDYVGQSNYRF 299
++ + S TW+ PP ++ FL DY+G NYRF
Sbjct: 310 KMANLGLSNASFTWYDNPPTELHGFLQADYLGIPNYRF 347
>gb|PON58619.1| Ribonuclease H-like domain containing protein [Parasponia
andersonii]
Length = 133
Score = 80.9 bits (198), Expect = 9e-17
Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Frame = +3
Query: 3 YTFAKGWTQLWLEPDSIYVVDLLHKRSVVVLWRHLSRWRYTLHLLSQMDLVVSHIYREGN 182
Y +A GW LW + DS Y++ LL + S+ V W W + + +S+M+ VSHIY EGN
Sbjct: 38 YAWAFGWKHLWFKSDSSYLITLLREHSLFVPWSWKPSWLHCIDRISKMNFYVSHIYWEGN 97
Query: 183 QVADILSKK---SQSATWWGVPPADIKQFLTEDYVG 281
VADIL+ + Q+ TWW P+ I + ++DY G
Sbjct: 98 PVADILASRVTNIQAPTWWHNTPSFIHKAFSKDYSG 133
>gb|POO03498.1| Ribonuclease H-like domain containing protein [Trema orientalis]
Length = 106
Score = 79.0 bits (193), Expect = 2e-16
Identities = 39/93 (41%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Frame = +3
Query: 9 FAKGWTQLWLEPDSIYVVDLLHKRSVVVLWRHLSRWRYTLHLLSQMDLVVSHIYREGNQV 188
F + W +LW+E DS YVV LL RS +V W H +RW + LH++ M + VSHIY E N V
Sbjct: 7 FVRSWQRLWIESDSTYVVGLLKSRSKLVPWNHRNRWFHVLHMVCSMQICVSHIYGEENHV 66
Query: 189 ADIL-SKKSQSATWWGVPPADIKQFLTEDYVGQ 284
A+ L S + WW IK + D++ Q
Sbjct: 67 ANALASAILEDYQWWSYALDFIKPLVFRDFMIQ 99
>gb|PRQ16567.1| putative ribonuclease H-like domain-containing protein [Rosa
chinensis]
Length = 237
Score = 80.5 bits (197), Expect = 1e-15
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Frame = +3
Query: 9 FAKGWTQLWLEPDSIYVVDLLHKRSVVVLWRHLSRWRYTLHLLSQMDLVVSHIYREGNQV 188
F +GWT LWLE DSI V+ L S W RW+ L + QM +HI+REGN
Sbjct: 135 FTRGWTTLWLESDSISVLASLSSDSFSPPWDLRVRWQNCLKNIQQMQFRSTHIFREGNAA 194
Query: 189 ADILSK---KSQSATWWGVPPADIKQFLTEDYVGQSNYRF 299
AD ++ S TW+ PPA++ ++L D++G NYRF
Sbjct: 195 ADKMANLGVSKHSFTWYPRPPAELHRYLQADFLGLPNYRF 234
>gb|PRQ42881.1| putative ribonuclease H-like domain, reverse transcriptase
zinc-binding domain-containing protein [Rosa chinensis]
Length = 401
Score = 81.6 bits (200), Expect = 2e-15
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Frame = +3
Query: 9 FAKGWTQLWLEPDSIYVVDLLHKRSVVVLWRHLSRWRYTLHLLSQMDLVVSHIYREGNQV 188
F +GWT LWLE DSI V+ L S W RW+ L + QM +HI+REGN
Sbjct: 248 FTRGWTTLWLESDSISVLACLSSNSFSPPWDLRVRWQNCLKNIQQMQFRRTHIFREGNAA 307
Query: 189 ADILSK---KSQSATWWGVPPADIKQFLTEDYVGQSNYRF 299
AD ++ S TW+ PPA++ ++L D++G NYRF
Sbjct: 308 ADKMANLGVSKHSFTWYPSPPAELHRYLQADFLGLPNYRF 347
>ref|XP_024190007.1| uncharacterized protein LOC112193973 [Rosa chinensis]
Length = 1248
Score = 82.0 bits (201), Expect = 2e-15
Identities = 42/100 (42%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Frame = +3
Query: 9 FAKGWTQLWLEPDSIYVVDLLHKRSVVVLWRHLSRWRYTLHLLSQMDLVVSHIYREGNQV 188
F +GWT LWLE DSI V+ L S W RW+ L + QM SHI+REGN
Sbjct: 1146 FTRGWTTLWLESDSISVLASLSSNSFSPPWDLRVRWQNCLKNIQQMQFRRSHIFREGNVA 1205
Query: 189 ADILSK---KSQSATWWGVPPADIKQFLTEDYVGQSNYRF 299
AD ++ S TW+ PPA++ ++L D++G NYRF
Sbjct: 1206 ADKMANLGVSKHSFTWYPSPPAELHRYLQADFLGLPNYRF 1245
>ref|XP_024164007.1| uncharacterized protein LOC112170981 [Rosa chinensis]
Length = 1205
Score = 81.6 bits (200), Expect = 3e-15
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Frame = +3
Query: 9 FAKGWTQLWLEPDSIYVVDLLHKRSVVVLWRHLSRWRYTLHLLSQMDLVVSHIYREGNQV 188
F +GWT LWLE DSI V+ L S W RW+ L + QM +HI+REGN
Sbjct: 1103 FTRGWTTLWLESDSISVLASLSSNSFSPPWDLRVRWQNCLKNIQQMQFRKTHIFREGNAA 1162
Query: 189 ADILSK---KSQSATWWGVPPADIKQFLTEDYVGQSNYRF 299
AD ++ S TW+ PPA++ ++L D++G NYRF
Sbjct: 1163 ADKMANLGVSKHSFTWYPSPPAELHRYLQADFLGLPNYRF 1202
>ref|XP_019430046.1| PREDICTED: uncharacterized protein LOC109337520, partial [Lupinus
angustifolius]
Length = 119
Score = 76.3 bits (186), Expect = 4e-15
Identities = 41/99 (41%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Frame = +3
Query: 15 KGWTQLWLEPDSIYVVDLLHKRSVVVLWRHLSRWRYTLHLLSQMDLVVSHIYREGNQVAD 194
KGW +WL+ +S VVD+ + +S V W+ +RW LS M+ VSHIYREGN AD
Sbjct: 20 KGWNSIWLKCNSSLVVDIFNGKSKVP-WKLQARWTICKIHLSSMNFKVSHIYREGNACAD 78
Query: 195 ILSK---KSQSATWWGVPPADIKQFLTEDYVGQSNYRFV 302
L+K S + TWW P I +++G NYRF+
Sbjct: 79 SLAKFGISSNTYTWWNSIPTFIHSHFYRNWLGLPNYRFL 117
>gb|PRQ42072.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1248
Score = 81.3 bits (199), Expect = 4e-15
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Frame = +3
Query: 9 FAKGWTQLWLEPDSIYVVDLLHKRSVVVLWRHLSRWRYTLHLLSQMDLVVSHIYREGNQV 188
F +GWT LWLE DSI V+ L S W RW+ L + QM +HI+REGN
Sbjct: 1146 FTRGWTTLWLESDSISVLASLSSNSFSPPWDLRVRWQNCLKNIQQMQFRRTHIFREGNAA 1205
Query: 189 ADILSK---KSQSATWWGVPPADIKQFLTEDYVGQSNYRF 299
AD ++ S TW+ PPA++ ++L D++G NYRF
Sbjct: 1206 ADKMANLGVSKHSFTWYPSPPAELHRYLQADFLGLPNYRF 1245
>dbj|GAU47510.1| hypothetical protein TSUD_367710 [Trifolium subterraneum]
Length = 152
Score = 77.0 bits (188), Expect = 4e-15
Identities = 40/96 (41%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Frame = +3
Query: 21 WTQLWLEPDSIYVVDLLHKRSVVVLWRHLSRWRYTLHLLSQMDLVVSHIYREGNQVADIL 200
W LWLE DS VV + + S V W +RW T LL+ M+ VSHI+REGN+VAD+L
Sbjct: 54 WKNLWLETDSTMVVSVFNNISEPVAWNLRNRWVNTRSLLNGMNCTVSHIHREGNKVADLL 113
Query: 201 S---KKSQSATWWGVPPADIKQFLTEDYVGQSNYRF 299
+ S + W V P+ I+ L ++++G N+RF
Sbjct: 114 ACHGLSLNSISHWNVAPSFIRNSLAKNHLGLPNFRF 149
>gb|PON43417.1| Ribonuclease H, partial [Parasponia andersonii]
Length = 213
Score = 78.2 bits (191), Expect = 5e-15
Identities = 42/102 (41%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
Frame = +3
Query: 3 YTFAKGWTQLWLEPDSIYVVDLLHKRSVVVLWRHLSRWRYTLHLLSQMDLVVSHIYREGN 182
Y +A GW LWLE DS Y+V LL RS + W W + +S+M+ VS+I+REGN
Sbjct: 112 YAWAFGWKHLWLESDSSYLVTLLRARSPSIPWHWKPSWLCYIDRISKMNFHVSYIFREGN 171
Query: 183 QVADILSKKS---QSATWWGVPPADIKQFLTEDYVGQSNYRF 299
VADIL+ ++ Q+ TWW + + F ++D G+S +RF
Sbjct: 172 PVADILASRATSIQAPTWWYNTLSSHEAF-SKDCSGRSTFRF 212