BLASTX nr result
ID: Rehmannia32_contig00028207
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia32_contig00028207
(520 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDP00431.1| unnamed protein product [Coffea canephora] 132 3e-34
emb|CDP14369.1| unnamed protein product [Coffea canephora] 132 4e-34
emb|CDP09717.1| unnamed protein product [Coffea canephora] 134 2e-33
emb|CDP14470.1| unnamed protein product [Coffea canephora] 127 1e-30
ref|XP_016458490.1| PREDICTED: uncharacterized protein LOC107782... 100 3e-21
gb|OMO52105.1| reverse transcriptase [Corchorus capsularis] 98 2e-20
ref|XP_013607556.1| PREDICTED: uncharacterized protein LOC106314... 98 2e-20
ref|XP_013594455.1| PREDICTED: uncharacterized protein LOC106302... 97 5e-20
gb|AAD17398.1| putative non-LTR retroelement reverse transcripta... 96 7e-20
ref|XP_013668803.1| uncharacterized protein LOC106373132 [Brassi... 96 1e-19
dbj|GAU40391.1| hypothetical protein TSUD_265350 [Trifolium subt... 91 1e-19
ref|XP_010507236.1| PREDICTED: uncharacterized protein LOC104783... 96 1e-19
ref|XP_020421443.1| uncharacterized protein LOC109949733 [Prunus... 91 3e-19
ref|XP_010468497.1| PREDICTED: uncharacterized protein LOC104748... 94 6e-19
ref|XP_013715866.1| uncharacterized protein LOC106419598 [Brassi... 92 1e-18
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 91 6e-18
ref|XP_009112590.1| PREDICTED: uncharacterized protein LOC103837... 91 6e-18
pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabi... 91 8e-18
ref|NP_189164.1| Ribonuclease H-like superfamily protein [Arabid... 89 9e-18
ref|XP_013694951.1| uncharacterized protein LOC106399015 [Brassi... 90 1e-17
>emb|CDP00431.1| unnamed protein product [Coffea canephora]
Length = 344
Score = 132 bits (333), Expect = 3e-34
Identities = 61/177 (34%), Positives = 98/177 (55%), Gaps = 5/177 (2%)
Frame = -2
Query: 519 SAYEVLRDA-----RAAKVDYPETSRNQSARKKMWIFTWKMSVKNKLKMFVWKCLQGALP 355
S Y+VL R AK + + S + K++W W +++K+K+K+F+W+C+ L
Sbjct: 151 SCYQVLLKEDRSMERGAKGE--DGSSYDDSNKQIWKTLWSLNIKHKIKLFIWRCITNTLT 208
Query: 354 TLDRLSRRGCDLEKICPMCGEMEESLEHLFFKCLRARKVWKIAPVSWEGIEGESVCFSGW 175
+ + RR IC CG+ E++EH+ F C +A+KVWK+AP+ W+GI+ ++ CF W
Sbjct: 209 ARETIFRRTKQGSPICSRCGDGMETIEHILFHCHQAQKVWKLAPIQWDGIQNQTGCFKKW 268
Query: 174 WQRLSNMVKGEINNHRIQLSVYILWWLWKTRNTWVFQKTWTGEIDTVKRASEEWVEF 4
W LS I L+ +LW LWK RN F+ + V++AS EW+E+
Sbjct: 269 WAALSQATSRTEGRQHIALTANLLWQLWKDRNQMEFEGKEREGLKIVQKASSEWMEY 325
>emb|CDP14369.1| unnamed protein product [Coffea canephora]
Length = 347
Score = 132 bits (332), Expect = 4e-34
Identities = 61/155 (39%), Positives = 86/155 (55%)
Frame = -2
Query: 468 ETSRNQSARKKMWIFTWKMSVKNKLKMFVWKCLQGALPTLDRLSRRGCDLEKICPMCGEM 289
E+S + + W F W + VK+KLK F+WKCLQG LP + R + +C CGE
Sbjct: 4 ESSSRRRCTPQGWNFLWGLKVKHKLKHFIWKCLQGILPVNAVIRERCSKGDSVCKCCGEY 63
Query: 288 EESLEHLFFKCLRARKVWKIAPVSWEGIEGESVCFSGWWQRLSNMVKGEINNHRIQLSVY 109
E++EHL F C A +WK+APVSW G+E F WW+ + E RI+L+V
Sbjct: 64 PETIEHLLFFCDNALAIWKVAPVSWAGLECLRNNFGHWWEEIREARAMESGQERIELTVN 123
Query: 108 ILWWLWKTRNTWVFQKTWTGEIDTVKRASEEWVEF 4
+LW +WK+RN F+ + V +A+ EW EF
Sbjct: 124 VLWQIWKSRNRRQFEDKGMDPMTVVNKATREWREF 158
>emb|CDP09717.1| unnamed protein product [Coffea canephora]
Length = 613
Score = 134 bits (337), Expect = 2e-33
Identities = 57/148 (38%), Positives = 89/148 (60%)
Frame = -2
Query: 450 SARKKMWIFTWKMSVKNKLKMFVWKCLQGALPTLDRLSRRGCDLEKICPMCGEMEESLEH 271
++ +K W + WK+ VK+K+K F+W+ L G LP D + +R + IC CGE EES+EH
Sbjct: 295 NSNEKQWKWLWKLKVKSKIKHFIWRSLNGLLPVNDLVFKRIHQGDPICDGCGEQEESIEH 354
Query: 270 LFFKCLRARKVWKIAPVSWEGIEGESVCFSGWWQRLSNMVKGEINNHRIQLSVYILWWLW 91
LFF+C RA++VWK+AP+ W+G+ ++ WW + ++L+V ILW +W
Sbjct: 355 LFFQCSRAQEVWKMAPIQWDGLTEQTRNILVWWNSMLEATNRIEGREHVELTVNILWQIW 414
Query: 90 KTRNTWVFQKTWTGEIDTVKRASEEWVE 7
K RN W F +++K+A +EW E
Sbjct: 415 KRRNEWKFNAKRRHPWESIKKALQEWQE 442
>emb|CDP14470.1| unnamed protein product [Coffea canephora]
Length = 660
Score = 127 bits (318), Expect = 1e-30
Identities = 58/154 (37%), Positives = 92/154 (59%), Gaps = 1/154 (0%)
Frame = -2
Query: 465 TSRNQSARKKMWIFTWKMSVKNKLKMFVWKCLQGALPTLDRLSRRGCDLEKICPMCGEME 286
T +Q +R+ MW WK+++K+K+K+F+WKC+ GALP + R+ + +C +CGE +
Sbjct: 336 TGEDQQSRQ-MWTTLWKLNIKHKVKIFIWKCITGALPVRAAIFRKTRMGDPVCRLCGEDQ 394
Query: 285 ESLEHLFFKCLRARKVWKIAPVSWEGIEGESVCFSGWWQRLSNMVKGEINNHRIQLSVYI 106
E++EHL C +++VWK AP+ W+G + F WW R+S + I L+ I
Sbjct: 395 ETVEHLMLNCQHSQQVWKAAPIQWDGAMDQKGDFRRWWIRISEARTRQGGMEHIGLTAII 454
Query: 105 LWWLWKTRNTWVFQ-KTWTGEIDTVKRASEEWVE 7
LW LWK RN+ F+ KT T+ +A +EW+E
Sbjct: 455 LWQLWKERNSKEFENKTSCSPARTIGKAQKEWLE 488
>ref|XP_016458490.1| PREDICTED: uncharacterized protein LOC107782157 [Nicotiana tabacum]
Length = 553
Score = 100 bits (248), Expect = 3e-21
Identities = 58/179 (32%), Positives = 92/179 (51%), Gaps = 9/179 (5%)
Frame = -2
Query: 513 YEVLRDARAAKVDYPETSRNQSAR--------KKMWIFTWKMSVKNKLKMFVWKCLQGAL 358
YEV AK +T RN A+ K W + +KNKLK F+ KC+ +L
Sbjct: 178 YEVKSGYYLAKGLAGKTIRNSEAQARSCHSFPKSFWDSLRNLEIKNKLKHFLRKCVINSL 237
Query: 357 PTLDRLSRRGCDLEKICPMCGEMEESLEHLFFKCLRARKVWKIAPVSWEGIEGESVCFSG 178
P L++R +L+K C +CG E +EH+ F+C +++ VWK +P++W I+ + FS
Sbjct: 238 PVNYTLAKRLQNLDKTCKICGLESEDIEHMLFRCPQSQLVWKQSPINWPDIDNITD-FSM 296
Query: 177 WWQRLS-NMVKGEINNHRIQLSVYILWWLWKTRNTWVFQKTWTGEIDTVKRASEEWVEF 4
WW L N + + LSV ++W +WK RN W F + + V +A E+ ++
Sbjct: 297 WWYNLFLNAKHFPESTELLDLSVNLMWKIWKGRNAWCFNQEMLEPTEIVSKALFEYGKY 355
>gb|OMO52105.1| reverse transcriptase [Corchorus capsularis]
Length = 1565
Score = 98.2 bits (243), Expect = 2e-20
Identities = 48/154 (31%), Positives = 79/154 (51%)
Frame = -2
Query: 462 SRNQSARKKMWIFTWKMSVKNKLKMFVWKCLQGALPTLDRLSRRGCDLEKICPMCGEMEE 283
S + + + W W + V K+K F+W+ + +PT + L +R C L C CG E
Sbjct: 1237 SSSSMQQSRTWRNLWNLKVAPKVKNFLWRSCRNIVPTKENLVKRHCSLFSQCDRCGAEVE 1296
Query: 282 SLEHLFFKCLRARKVWKIAPVSWEGIEGESVCFSGWWQRLSNMVKGEINNHRIQLSVYIL 103
SLEH+ F C A+ VW+ + S+ V F WW+ +N + + + ++L Y+
Sbjct: 1297 SLEHILFFCPFAQAVWRASHFSYSPRSEGFVSFLKWWEESANTIVSFGSLNVVELIRYLC 1356
Query: 102 WWLWKTRNTWVFQKTWTGEIDTVKRASEEWVEFN 1
W +WK RN++VF+ I+ A E+VE+N
Sbjct: 1357 WNVWKARNSFVFEGREGNPIEVWNHAVAEFVEYN 1390
>ref|XP_013607556.1| PREDICTED: uncharacterized protein LOC106314175 [Brassica oleracea
var. oleracea]
Length = 998
Score = 97.8 bits (242), Expect = 2e-20
Identities = 50/149 (33%), Positives = 81/149 (54%), Gaps = 7/149 (4%)
Frame = -2
Query: 441 KKMWIFTWKMSVKNKLKMFVWKCLQGALPTLDRLSRRGCDLEKICPMCGEMEESLEHLFF 262
KK+W WK+ +KLK F W+ L GAL +RL RG ++ C CG ES+ H+ F
Sbjct: 673 KKLWSNIWKIKAPSKLKHFFWRSLSGALAVKERLQTRGIQIDATCQSCGAGTESIFHVLF 732
Query: 261 KCLRARKVWKIA--PVSWEGIEGESVCFSGWWQRLSNMVKGEINNHRIQLSV-----YIL 103
C +A+++W++A P+ G SV + + ++ G +NN R+++S+ ++L
Sbjct: 733 LCNKAQQMWELANIPIPPAGFSANSVFLNIY------LLVGVMNNSRLEMSITRAVPWVL 786
Query: 102 WWLWKTRNTWVFQKTWTGEIDTVKRASEE 16
W +WK RN+ F+ T V+ A EE
Sbjct: 787 WQIWKARNSLAFKNTSLSPRQAVRTAFEE 815
>ref|XP_013594455.1| PREDICTED: uncharacterized protein LOC106302504 [Brassica oleracea
var. oleracea]
Length = 1235
Score = 96.7 bits (239), Expect = 5e-20
Identities = 51/149 (34%), Positives = 82/149 (55%), Gaps = 7/149 (4%)
Frame = -2
Query: 441 KKMWIFTWKMSVKNKLKMFVWKCLQGALPTLDRLSRRGCDLEKICPMCGEMEESLEHLFF 262
KK+W WK+ +KLK F W+ L GAL +RL RG ++ C CG ES+ H+ F
Sbjct: 696 KKLWSNIWKIKAPSKLKHFFWRSLSGALAVKERLQTRGIQIDATCQSCGAGTESIFHVLF 755
Query: 261 KCLRARKVWKIA--PVSWEGIEGESVCFSGWWQRLSNMVKGEINNHRIQLSV-----YIL 103
C +A+++W++A P+ G SV + + ++V G +NN R+++S+ ++L
Sbjct: 756 LCNKAQQMWELANIPIPPAGFSANSV-----FLNIYHLV-GVMNNSRLEMSIRRAVPWVL 809
Query: 102 WWLWKTRNTWVFQKTWTGEIDTVKRASEE 16
W +WK RN+ F+ T V+ A EE
Sbjct: 810 WQIWKARNSLAFKNTSLSPRQAVRTAFEE 838
>gb|AAD17398.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1225
Score = 96.3 bits (238), Expect = 7e-20
Identities = 53/153 (34%), Positives = 79/153 (51%), Gaps = 1/153 (0%)
Frame = -2
Query: 519 SAYEVLRDARAAKVDYPETSRNQSARKKMWIFTWKMSVKNKLKMFVWKCLQGALPTLDRL 340
S Y RD D P + SA + WK+ K K F W+CL G L T RL
Sbjct: 897 SGYWAARDLSRPTCDLPFQGPSVSALQAQ---VWKIKTTRKFKHFEWQCLSGCLATNQRL 953
Query: 339 SRRGCDLEKICPMCGEMEESLEHLFFKCLRARKVWKIAPV-SWEGIEGESVCFSGWWQRL 163
R EK+CP CG EES+ HL F C +R++W ++P+ S E I + F + L
Sbjct: 954 FSRHIGTEKVCPRCGAEEESINHLLFLCPPSRQIWALSPIPSSEYIFPRNSLFYNFDFLL 1013
Query: 162 SNMVKGEINNHRIQLSVYILWWLWKTRNTWVFQ 64
S + +I +++ +ILW++WK+RN ++F+
Sbjct: 1014 SRGKEFDIAEDIMEIFPWILWYIWKSRNRFIFE 1046
>ref|XP_013668803.1| uncharacterized protein LOC106373132 [Brassica napus]
Length = 1776
Score = 95.9 bits (237), Expect = 1e-19
Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 4/151 (2%)
Frame = -2
Query: 441 KKMWIFTWKMSVKNKLKMFVWKCLQGALPTLDRLSRRGCDLEKICPMCGEMEESLEHLFF 262
K +W WK+ KLK F+WK L GAL +DRL RG ++ +C +C E++ HL F
Sbjct: 1474 KHLWSSLWKIKAPAKLKHFLWKALSGALAVMDRLRSRGIQVDPMCKVCNNGTETICHLLF 1533
Query: 261 KCLRARKVWKIAPVSW-EGIEGESVCFSGWWQRLSNMVKGEINNHRIQLSVYILWWLWKT 85
C AR VW+ A + G ++ F + L M K + + +Q +I+W+LWK+
Sbjct: 1534 TCPMARDVWERASIVLPSGGFSQNSVFLNLYHLLKQMQK-KPKDMDVQAFPWIIWYLWKS 1592
Query: 84 RNTWVFQKTWTGEIDTVKRASEE---WVEFN 1
RN +F++ + + +A EE W E N
Sbjct: 1593 RNGLIFERRHYSSVSVLLKAREEANVWFELN 1623
>dbj|GAU40391.1| hypothetical protein TSUD_265350 [Trifolium subterraneum]
Length = 176
Score = 90.5 bits (223), Expect = 1e-19
Identities = 46/133 (34%), Positives = 71/133 (53%)
Frame = -2
Query: 432 WIFTWKMSVKNKLKMFVWKCLQGALPTLDRLSRRGCDLEKICPMCGEMEESLEHLFFKCL 253
W WK+ V NK+K+F+W+ L+G LP RL +G + CP CGE EE+ H F C+
Sbjct: 5 WKKLWKLKVPNKVKIFLWRVLRGCLPVRARLRSKGVQCDTKCPCCGEYEENEWHCFVGCM 64
Query: 252 RARKVWKIAPVSWEGIEGESVCFSGWWQRLSNMVKGEINNHRIQLSVYILWWLWKTRNTW 73
A++VW + W +E S + + NM++ E++N + + ++W LW RN
Sbjct: 65 SAQEVW-METECWPAVEKYSTNAMSFVSMILNMLE-ELDNKNMTVVAMMMWSLWWRRN-- 120
Query: 72 VFQKTWTGEIDTV 34
QK W + TV
Sbjct: 121 --QKCWNDNLPTV 131
>ref|XP_010507236.1| PREDICTED: uncharacterized protein LOC104783832 [Camelina sativa]
Length = 1127
Score = 95.5 bits (236), Expect = 1e-19
Identities = 53/148 (35%), Positives = 82/148 (55%), Gaps = 10/148 (6%)
Frame = -2
Query: 420 WKMSVKNKLKMFVWKCLQGALPTLDRLSRRGCDLEKICPMCGEMEESLEHLFFKCLRARK 241
WK+ +KLK+F+WK GALP L+RL+ RG L+ +C CG ES+ HL F+C AR+
Sbjct: 853 WKLLAPSKLKIFIWKAASGALPVLERLNSRGMKLDPLCETCGMEGESINHLLFECSFARQ 912
Query: 240 VWKIA--PVSWEGIEGESVCFSGWWQRLSNMVKGEINNHRIQLSV-----YILWWLWKTR 82
VW +A P+ G + S+ +Q L ++V N ++ L + +ILW +WK R
Sbjct: 913 VWAVAGFPLPENGFDKISI-----YQNL-HLVFSICKNVQLSLQIKRYLPWILWLMWKNR 966
Query: 81 NTWVFQKT---WTGEIDTVKRASEEWVE 7
N VF+ T + ++ +EEW +
Sbjct: 967 NNLVFEGNVYLITDLVKKIREDAEEWFQ 994
>ref|XP_020421443.1| uncharacterized protein LOC109949733 [Prunus persica]
Length = 230
Score = 90.9 bits (224), Expect = 3e-19
Identities = 48/144 (33%), Positives = 74/144 (51%), Gaps = 2/144 (1%)
Frame = -2
Query: 456 NQSARKKMWIFTWKMSVKNKLKMFVWKCLQGALPTLDRLSRRGCDLEKICPMCGEMEESL 277
NQS + W W + V K++MF+W+C + L + L RR D+E C +CG ++
Sbjct: 43 NQSGQSGPWKHIWALQVPPKIQMFIWRCYRNVLAVRENLRRRRVDVEADCLLCGNNGKTE 102
Query: 276 EHLFFKCLRARKVWKIAP--VSWEGIEGESVCFSGWWQRLSNMVKGEINNHRIQLSVYIL 103
HLFF+C AR W +P + G+EGE S W L + E + +Q+ + L
Sbjct: 103 VHLFFRCEIARLFWFASPSHLDVHGVEGEDF-LSCWECLLQKFAQVEKMDEILQIVAFGL 161
Query: 102 WWLWKTRNTWVFQKTWTGEIDTVK 31
W +WK RN VF++ +D V+
Sbjct: 162 WRIWKWRNAVVFERQSLDPMDLVR 185
>ref|XP_010468497.1| PREDICTED: uncharacterized protein LOC104748579 [Camelina sativa]
Length = 1041
Score = 93.6 bits (231), Expect = 6e-19
Identities = 45/142 (31%), Positives = 77/142 (54%), Gaps = 2/142 (1%)
Frame = -2
Query: 420 WKMSVKNKLKMFVWKCLQGALPTLDRLSRRGCDLEKICPMCGEMEESLEHLFFKCLRARK 241
WK+ K+K+F+WK L GALP L +G +E C +CG EE++ H+ F C +R+
Sbjct: 730 WKVHTDPKIKVFLWKLLSGALPVTAALKSKGMKVEDTCQICGAEEETINHVLFSCSLSRQ 789
Query: 240 VWKIA--PVSWEGIEGESVCFSGWWQRLSNMVKGEINNHRIQLSVYILWWLWKTRNTWVF 67
+W ++ P G+ S+ FS LSN + +++W +WK +N+ F
Sbjct: 790 IWALSGIPSPSSGLHKGSI-FSNMHYLLSNQRNSLWPEELRKFFPWLIWRIWKNKNSVSF 848
Query: 66 QKTWTGEIDTVKRASEEWVEFN 1
+ T +DTV++ E+W+E++
Sbjct: 849 EGTSFSPLDTVQKCREDWMEWS 870
>ref|XP_013715866.1| uncharacterized protein LOC106419598 [Brassica napus]
ref|XP_013719940.1| uncharacterized protein LOC106423717 [Brassica napus]
Length = 385
Score = 91.7 bits (226), Expect = 1e-18
Identities = 45/135 (33%), Positives = 77/135 (57%), Gaps = 7/135 (5%)
Frame = -2
Query: 441 KKMWIFTWKMSVKNKLKMFVWKCLQGALPTLDRLSRRGCDLEKICPMCGEMEESLEHLFF 262
KK+W WK+ +KLK F W+ L G L +RL RG ++ C CG ES+ H+ F
Sbjct: 253 KKLWNNIWKIKAPSKLKHFFWRSLSGVLAVKERLQTRGIQIDATCQSCGARAESISHVLF 312
Query: 261 KCLRARKVWKIA--PVSWEGIEGESVCFSGWWQRLSNMVKGEINNHRIQLSV-----YIL 103
C +AR++W++A P+ G SV + + ++V G +NN+ +++++ +++
Sbjct: 313 PCDKARQMWELANIPIPPAGFSVNSV-----FLNIFHLV-GVMNNNSLEMNIRRAVPWVM 366
Query: 102 WWLWKTRNTWVFQKT 58
W +WK RN+ VF+ T
Sbjct: 367 WQIWKARNSLVFKNT 381
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 90.9 bits (224), Expect = 6e-18
Identities = 53/170 (31%), Positives = 82/170 (48%)
Frame = -2
Query: 513 YEVLRDARAAKVDYPETSRNQSARKKMWIFTWKMSVKNKLKMFVWKCLQGALPTLDRLSR 334
+E+L D + P TSR + K+W WK + K+K+F WK + L + +
Sbjct: 1030 HELLEDRKTG----PSTSRGPNL--KLWQKIWKAKIPPKVKLFSWKAIHNGLAVYTNMRK 1083
Query: 333 RGCDLEKICPMCGEMEESLEHLFFKCLRARKVWKIAPVSWEGIEGESVCFSGWWQRLSNM 154
RG +++ CP CGE EE+ EHL + C + + W I+P+ E+ F W + L +
Sbjct: 1084 RGMNIDGACPRCGEKEETTEHLIWGCDESSRAWYISPLRIHTGNIEAGSFRIWVESLLDT 1143
Query: 153 VKGEINNHRIQLSVYILWWLWKTRNTWVFQKTWTGEIDTVKRASEEWVEF 4
K + L I W +W RN WVF+K + V+RA +EF
Sbjct: 1144 HK---DTEWWALFWMICWNIWLGRNKWVFEKKKLAFQEVVERAVRGVMEF 1190
>ref|XP_009112590.1| PREDICTED: uncharacterized protein LOC103837948 [Brassica rapa]
Length = 1415
Score = 90.9 bits (224), Expect = 6e-18
Identities = 52/141 (36%), Positives = 76/141 (53%), Gaps = 4/141 (2%)
Frame = -2
Query: 420 WKMSVKNKLKMFVWKCLQGALPTLDRLSRRGCDLEKICPMCGEMEESLEHLFFKCLRARK 241
W+++ K+KMF WK L+GALP +RL R ++ C CGE ES+ HLFF+C ARK
Sbjct: 1112 WQLACAPKVKMFAWKLLKGALPVGERLVERHVPVDPACKRCGE-AESINHLFFQCAFARK 1170
Query: 240 VWKIAPVSWEGIEGESVCFSGWWQRLSNMVKGEINNHRI-QLSVYILWWLWKTRNTWVFQ 64
VW AP S + +G W L ++ + L+ +ILW +WK RN +VF+
Sbjct: 1171 VWLNAPFSTAPDFSGLLDLAGMWTDLCSITCLPPSGITAGSLAPWILWSIWKERNKFVFE 1230
Query: 63 KTWTGEIDTVKRA---SEEWV 10
T T+ +A + EW+
Sbjct: 1231 GTSASAESTLSKAIGLAREWI 1251
>pir||T00833 RNA-directed DNA polymerase homolog T13L16.7 - Arabidopsis thaliana
(fragment)
Length = 1365
Score = 90.5 bits (223), Expect = 8e-18
Identities = 45/139 (32%), Positives = 73/139 (52%), Gaps = 3/139 (2%)
Frame = -2
Query: 420 WKMSVKNKLKMFVWKCLQGALPTLDRLSRRGCDLEKICPMCGEMEESLEHLFFKCLRARK 241
W + K+++F+WK L GA+P DRL RG + C MC E++ H+ F+C AR+
Sbjct: 1046 WNLHTAPKIRIFLWKALHGAIPVEDRLRTRGIRSDDGCLMCDTENETINHILFECPLARQ 1105
Query: 240 VWKIAPVSWEGIEGESVCFSGWWQRLSNMVKGEINNHRIQLSVYILWWLWKTRNTWVFQ- 64
VW I +S G E + ++ + + + ++ +H +S +ILW+LWK RN +F+
Sbjct: 1106 VWAITHLSSAGSEFSNSVYTNMSRLIDLTQQNDLPHHLRFVSPWILWFLWKNRNALLFEG 1165
Query: 63 --KTWTGEIDTVKRASEEW 13
T +D A EW
Sbjct: 1166 KGSITTTLVDKAYEAYHEW 1184
>ref|NP_189164.1| Ribonuclease H-like superfamily protein [Arabidopsis thaliana]
dbj|BAB02086.1| reverse transcriptase-like protein [Arabidopsis thaliana]
gb|AEE77003.1| Ribonuclease H-like superfamily protein [Arabidopsis thaliana]
Length = 343
Score = 89.0 bits (219), Expect = 9e-18
Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 3/143 (2%)
Frame = -2
Query: 420 WKMSVKNKLKMFVWKCLQGALPTLDRLSRRGCDLEKICPMCGEMEESLEHLFFKCLRARK 241
WK+ K+K F+WK L GAL T D L RR C C + +E+ +HLFF C A++
Sbjct: 19 WKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFYAQQ 78
Query: 240 VWKIAPVSWEGIEGESVCFSGWWQRLSNMVKGEINNHRIQLSVYILWWLWKTRNTWVFQK 61
VW+ + + + + + + L + L+++ILW LWK+RN VFQ+
Sbjct: 79 VWRASGIPHQELRTTGITMETKMELLLSSCLANRQPQLFNLAIWILWRLWKSRNQLVFQQ 138
Query: 60 ---TWTGEIDTVKRASEEWVEFN 1
+W + + +EW + N
Sbjct: 139 KSISWQNTLQRARNDVQEWEDTN 161
>ref|XP_013694951.1| uncharacterized protein LOC106399015 [Brassica napus]
Length = 1055
Score = 89.7 bits (221), Expect = 1e-17
Identities = 53/171 (30%), Positives = 88/171 (51%), Gaps = 3/171 (1%)
Frame = -2
Query: 519 SAYEVLRDARAAKVDYPETSRNQSARKKMWIFTWKMSVKNKLKMFVWKCLQGALPTLDRL 340
S Y++L++ ++ P T+ K++W WK KL+ F+W+ L GAL +L
Sbjct: 699 SGYKLLQELH--ELHSPATNSMPPLEKRLWSSLWKAKASPKLRHFLWRVLSGALAVKQQL 756
Query: 339 SRRGCDLEKICPMCGEMEESLEHLFFKCLRARKVWKIA--PVSWEGIEGESVCFSGWWQR 166
RG ++ +C +CG ES+ ++ F C RAR+VW ++ P+ G SV +
Sbjct: 757 RYRGIQVDPLCSVCGTEAESICYMLFHCPRAREVWSLSQLPLPVAGFSQNSVFLN--LHY 814
Query: 165 LSNMVKGEINNHRIQLSV-YILWWLWKTRNTWVFQKTWTGEIDTVKRASEE 16
L + E + I+LS +ILW +WK RN F++ ++ +ASEE
Sbjct: 815 LFTCSRNERISPAIRLSFPWILWHIWKARNMLSFEQVRFSGVEIWNKASEE 865