BLASTX nr result

ID: Rehmannia32_contig00028027 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00028027
         (419 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011073322.1| ABC transporter C family member 13 [Sesamum ...    67   3e-10
gb|PIN08442.1| Multidrug/pheromone exporter, ABC superfamily [Ha...    56   3e-06

>ref|XP_011073322.1| ABC transporter C family member 13 [Sesamum indicum]
          Length = 1456

 Score = 67.4 bits (163), Expect = 3e-10
 Identities = 35/56 (62%), Positives = 41/56 (73%)
 Frame = -1

Query: 419 ISTRRLSKYLSSYESDIEPESSSLIVYDEKFYSKEPAVIVVVNDETCAWSSYDQSG 252
           ISTRRLSKYLS +ES+   E SS I YDEKF SK+ A  V +ND +C WSSYD+ G
Sbjct: 567 ISTRRLSKYLSCHESEFGLEHSSPIFYDEKFDSKDTA--VSINDASCTWSSYDEKG 620


>gb|PIN08442.1| Multidrug/pheromone exporter, ABC superfamily [Handroanthus
           impetiginosus]
          Length = 978

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 31/54 (57%), Positives = 37/54 (68%)
 Frame = -1

Query: 419 ISTRRLSKYLSSYESDIEPESSSLIVYDEKFYSKEPAVIVVVNDETCAWSSYDQ 258
           IS RRLSKYLS YESDI  ++SS I   EKF  K   V+  V+D +C WSSYD+
Sbjct: 93  ISIRRLSKYLSCYESDIGLDNSSPIHLQEKFGFKRTDVL--VHDASCTWSSYDE 144


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