BLASTX nr result
ID: Rehmannia32_contig00024938
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia32_contig00024938
(503 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011088661.1| F-box protein SKIP23-like [Sesamum indicum] 154 4e-42
gb|EYU37999.1| hypothetical protein MIMGU_mgv1a012520mg [Erythra... 138 2e-37
ref|XP_012837228.1| PREDICTED: F-box protein SKIP23-like [Erythr... 138 5e-36
ref|XP_022899330.1| F-box protein SKIP23 [Olea europaea var. syl... 108 7e-26
ref|XP_022011820.1| F-box protein SKIP23 [Helianthus annuus] >gi... 100 5e-22
gb|OIT34361.1| f-box protein skip23 [Nicotiana attenuata] 99 4e-21
ref|XP_019267471.1| PREDICTED: F-box protein SKIP23 isoform X2 [... 99 5e-21
gb|KZV41134.1| hypothetical protein F511_09330 [Dorcoceras hygro... 96 2e-20
ref|XP_023736352.1| F-box protein SKIP23 [Lactuca sativa] 96 5e-20
ref|XP_009609928.1| PREDICTED: F-box protein SKIP23 isoform X2 [... 96 5e-20
ref|XP_009802631.1| PREDICTED: F-box protein SKIP23 isoform X2 [... 95 1e-19
gb|KVH88005.1| F-box domain, cyclin-like protein [Cynara cardunc... 94 2e-19
emb|CDP21531.1| unnamed protein product, partial [Coffea canephora] 92 9e-19
ref|XP_019165204.1| PREDICTED: F-box protein SKIP23-like [Ipomoe... 92 9e-19
ref|XP_019267470.1| PREDICTED: F-box protein SKIP23 isoform X1 [... 92 2e-18
ref|XP_016469223.1| PREDICTED: F-box protein SKIP23-like, partia... 89 2e-17
ref|XP_009609927.1| PREDICTED: F-box protein SKIP23 isoform X1 [... 89 2e-17
ref|XP_009802630.1| PREDICTED: F-box protein SKIP23 isoform X1 [... 88 3e-17
ref|XP_015060004.1| PREDICTED: F-box protein SKIP23-like [Solanu... 87 6e-17
gb|PLY71813.1| hypothetical protein LSAT_3X47300 [Lactuca sativa] 87 8e-17
>ref|XP_011088661.1| F-box protein SKIP23-like [Sesamum indicum]
Length = 401
Score = 154 bits (389), Expect = 4e-42
Identities = 68/82 (82%), Positives = 75/82 (91%)
Frame = +3
Query: 3 ASTSEIFGDDRFKGNCIFFTDQYCNREDDGLWKSRGVGVFDLESGSIGPIGNHIGYSRMF 182
A SEI GDD+++GNCIFFTDQYCNR+DDGLWKSRGVGVFDLESGSIGPIGNH+GYS+MF
Sbjct: 320 ARASEISGDDKYRGNCIFFTDQYCNRDDDGLWKSRGVGVFDLESGSIGPIGNHVGYSKMF 379
Query: 183 WPPPDWVYSTSSIEAGLNGLNI 248
WPPPDWV ST+SIE GL LNI
Sbjct: 380 WPPPDWVCSTASIEDGLYRLNI 401
>gb|EYU37999.1| hypothetical protein MIMGU_mgv1a012520mg [Erythranthe guttata]
Length = 248
Score = 138 bits (347), Expect = 2e-37
Identities = 64/83 (77%), Positives = 73/83 (87%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 ASTSEIFGDDRFKGNCIFFTDQYCNREDD-GLWKSRGVGVFDLESGSIGPIGNHIGYSRM 179
AS SEIF D+ KGNCIFFTDQYCNREDD G+WK GVGVFD+ES SIGPI NH+GYS+M
Sbjct: 167 ASASEIFRDNSCKGNCIFFTDQYCNREDDDGVWKI-GVGVFDMESRSIGPIDNHVGYSKM 225
Query: 180 FWPPPDWVYSTSSIEAGLNGLNI 248
FWPPPDW+YST+SIEAG++ LNI
Sbjct: 226 FWPPPDWIYSTASIEAGMDRLNI 248
>ref|XP_012837228.1| PREDICTED: F-box protein SKIP23-like [Erythranthe guttata]
Length = 401
Score = 138 bits (347), Expect = 5e-36
Identities = 64/83 (77%), Positives = 73/83 (87%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 ASTSEIFGDDRFKGNCIFFTDQYCNREDD-GLWKSRGVGVFDLESGSIGPIGNHIGYSRM 179
AS SEIF D+ KGNCIFFTDQYCNREDD G+WK GVGVFD+ES SIGPI NH+GYS+M
Sbjct: 320 ASASEIFRDNSCKGNCIFFTDQYCNREDDDGVWKI-GVGVFDMESRSIGPIDNHVGYSKM 378
Query: 180 FWPPPDWVYSTSSIEAGLNGLNI 248
FWPPPDW+YST+SIEAG++ LNI
Sbjct: 379 FWPPPDWIYSTASIEAGMDRLNI 401
>ref|XP_022899330.1| F-box protein SKIP23 [Olea europaea var. sylvestris]
Length = 257
Score = 108 bits (270), Expect = 7e-26
Identities = 53/83 (63%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Frame = +3
Query: 3 ASTSEIFGDDRFKGNCIFFTDQYCN-REDDGLWKSRGVGVFDLESGSIGPIGNHIGYSRM 179
AS E+FGD+ KGNCIFFTDQ+ + REDD +WKSRG+ VF+LESG IGPI + GYS M
Sbjct: 175 ASALEVFGDNGCKGNCIFFTDQFFSGREDDWVWKSRGIRVFNLESGRIGPIDSQDGYSDM 234
Query: 180 FWPPPDWVYSTSSIEAGLNGLNI 248
FWPPP WV S S+EA L L I
Sbjct: 235 FWPPPAWVCSNVSVEAELERLAI 257
>ref|XP_022011820.1| F-box protein SKIP23 [Helianthus annuus]
gb|OTF94962.1| hypothetical protein HannXRQ_Chr15g0477851 [Helianthus annuus]
Length = 400
Score = 100 bits (250), Expect = 5e-22
Identities = 49/71 (69%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Frame = +3
Query: 39 KGNCIFFTDQYCNREDDGLWKSRGVGVFDLESGSIGPIGNHIGYSRMFWPPPDWVYSTS- 215
KGNC+FFT Q NREDDGL KSRGVGVFDLESGSIG I N GYS++FWPPP W++S
Sbjct: 332 KGNCVFFTGQ--NREDDGLVKSRGVGVFDLESGSIGAISNDAGYSQLFWPPPQWLHSDPL 389
Query: 216 SIEAGLNGLNI 248
++E GL+ LNI
Sbjct: 390 NLEEGLDHLNI 400
>gb|OIT34361.1| f-box protein skip23 [Nicotiana attenuata]
Length = 411
Score = 98.6 bits (244), Expect = 4e-21
Identities = 44/72 (61%), Positives = 56/72 (77%), Gaps = 2/72 (2%)
Frame = +3
Query: 39 KGNCIFFTDQY-CNREDDG-LWKSRGVGVFDLESGSIGPIGNHIGYSRMFWPPPDWVYST 212
KGNCI FTDQY C+ EDDG LWK+ G+GVF+L++GSIGPI ++ GY+ +FWPPP W+ S
Sbjct: 340 KGNCILFTDQYFCSTEDDGGLWKNHGIGVFNLDNGSIGPISSYNGYAELFWPPPSWICSP 399
Query: 213 SSIEAGLNGLNI 248
I+A LN L I
Sbjct: 400 QPIDAELNELKI 411
>ref|XP_019267471.1| PREDICTED: F-box protein SKIP23 isoform X2 [Nicotiana attenuata]
Length = 453
Score = 98.6 bits (244), Expect = 5e-21
Identities = 44/72 (61%), Positives = 56/72 (77%), Gaps = 2/72 (2%)
Frame = +3
Query: 39 KGNCIFFTDQY-CNREDDG-LWKSRGVGVFDLESGSIGPIGNHIGYSRMFWPPPDWVYST 212
KGNCI FTDQY C+ EDDG LWK+ G+GVF+L++GSIGPI ++ GY+ +FWPPP W+ S
Sbjct: 382 KGNCILFTDQYFCSTEDDGGLWKNHGIGVFNLDNGSIGPISSYNGYAELFWPPPSWICSP 441
Query: 213 SSIEAGLNGLNI 248
I+A LN L I
Sbjct: 442 QPIDAELNELKI 453
>gb|KZV41134.1| hypothetical protein F511_09330 [Dorcoceras hygrometricum]
Length = 386
Score = 96.3 bits (238), Expect = 2e-20
Identities = 43/61 (70%), Positives = 48/61 (78%)
Frame = +3
Query: 27 DDRFKGNCIFFTDQYCNREDDGLWKSRGVGVFDLESGSIGPIGNHIGYSRMFWPPPDWVY 206
D R KGNCI FT+ RE+D +WKSRG GVFDLESGSI PIG+ YS+MFWPPPDWVY
Sbjct: 322 DLRCKGNCILFTNHCSGREEDDVWKSRGAGVFDLESGSIEPIGSLREYSKMFWPPPDWVY 381
Query: 207 S 209
S
Sbjct: 382 S 382
>ref|XP_023736352.1| F-box protein SKIP23 [Lactuca sativa]
Length = 401
Score = 95.5 bits (236), Expect = 5e-20
Identities = 46/71 (64%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Frame = +3
Query: 39 KGNCIFFTDQYCNREDDGLWKSRGVGVFDLESGSIGPIGNHIGYSRMFWPPPDWVYSTS- 215
KGNC+FFT +REDDGL K+RGVGVFDLESGSIGPI N+ S++FWPPP W++S
Sbjct: 333 KGNCVFFTG--LSREDDGLMKNRGVGVFDLESGSIGPIANNSANSQLFWPPPPWLHSNPV 390
Query: 216 SIEAGLNGLNI 248
++E GLN LNI
Sbjct: 391 ALEDGLNHLNI 401
>ref|XP_009609928.1| PREDICTED: F-box protein SKIP23 isoform X2 [Nicotiana
tomentosiformis]
Length = 452
Score = 95.9 bits (237), Expect = 5e-20
Identities = 42/72 (58%), Positives = 55/72 (76%), Gaps = 2/72 (2%)
Frame = +3
Query: 39 KGNCIFFTDQY-CNREDDG-LWKSRGVGVFDLESGSIGPIGNHIGYSRMFWPPPDWVYST 212
KGNCI FTDQ+ C+ EDDG +WK+ G+GVF L++GSIGPI ++ GY+ +FWPPP W+ S
Sbjct: 381 KGNCILFTDQFFCSTEDDGGMWKNHGIGVFSLDNGSIGPISSYNGYAELFWPPPSWICSP 440
Query: 213 SSIEAGLNGLNI 248
I+A LN L I
Sbjct: 441 QPIDAELNELKI 452
>ref|XP_009802631.1| PREDICTED: F-box protein SKIP23 isoform X2 [Nicotiana sylvestris]
Length = 411
Score = 94.7 bits (234), Expect = 1e-19
Identities = 42/72 (58%), Positives = 55/72 (76%), Gaps = 2/72 (2%)
Frame = +3
Query: 39 KGNCIFFTDQY-CNREDDG-LWKSRGVGVFDLESGSIGPIGNHIGYSRMFWPPPDWVYST 212
KGNCI FTDQ+ C+ EDDG LWK+ G+G+F L++GSIGPI ++ GY+ +FWPPP W+ S
Sbjct: 340 KGNCILFTDQFFCSTEDDGGLWKNYGIGLFSLDNGSIGPISSYNGYAELFWPPPSWICSP 399
Query: 213 SSIEAGLNGLNI 248
I+A LN L I
Sbjct: 400 QPIDAELNELKI 411
>gb|KVH88005.1| F-box domain, cyclin-like protein [Cynara cardunculus var.
scolymus]
Length = 398
Score = 94.0 bits (232), Expect = 2e-19
Identities = 42/59 (71%), Positives = 49/59 (83%)
Frame = +3
Query: 39 KGNCIFFTDQYCNREDDGLWKSRGVGVFDLESGSIGPIGNHIGYSRMFWPPPDWVYSTS 215
+GNC+FFT Q +REDDGL KSRGVGVFDLESG IGPI N GYS++FWPPP W++S S
Sbjct: 333 RGNCVFFTGQ--SREDDGLMKSRGVGVFDLESGCIGPISNDSGYSQLFWPPPHWLHSDS 389
>emb|CDP21531.1| unnamed protein product, partial [Coffea canephora]
Length = 450
Score = 92.4 bits (228), Expect = 9e-19
Identities = 43/71 (60%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Frame = +3
Query: 39 KGNCIFFTDQYCN-REDDGLWKSRGVGVFDLESGSIGPIGNHIGYSRMFWPPPDWVYSTS 215
+GNCI FTDQ+ + REDDG K G+GVFDLESGSIGPI ++ GYS FWPPP WVY S
Sbjct: 380 QGNCILFTDQFFHDREDDGGSKGNGIGVFDLESGSIGPITSYQGYSESFWPPPAWVYPPS 439
Query: 216 SIEAGLNGLNI 248
++E L L++
Sbjct: 440 AVEDWLEELSV 450
>ref|XP_019165204.1| PREDICTED: F-box protein SKIP23-like [Ipomoea nil]
Length = 402
Score = 92.0 bits (227), Expect = 9e-19
Identities = 42/70 (60%), Positives = 52/70 (74%)
Frame = +3
Query: 39 KGNCIFFTDQYCNREDDGLWKSRGVGVFDLESGSIGPIGNHIGYSRMFWPPPDWVYSTSS 218
+GN I F D Y RE DG+WK G+GV +LESGSIGPI ++IGYS +FWPPP W+ S S
Sbjct: 335 RGNRIVFADYY--REGDGVWKIPGIGVSNLESGSIGPINSYIGYSELFWPPPSWISSASQ 392
Query: 219 IEAGLNGLNI 248
IE G+N L+I
Sbjct: 393 IEDGMNQLSI 402
>ref|XP_019267470.1| PREDICTED: F-box protein SKIP23 isoform X1 [Nicotiana attenuata]
Length = 455
Score = 91.7 bits (226), Expect = 2e-18
Identities = 39/64 (60%), Positives = 51/64 (79%), Gaps = 2/64 (3%)
Frame = +3
Query: 39 KGNCIFFTDQY-CNREDDG-LWKSRGVGVFDLESGSIGPIGNHIGYSRMFWPPPDWVYST 212
KGNCI FTDQY C+ EDDG LWK+ G+GVF+L++GSIGPI ++ GY+ +FWPPP W+ S
Sbjct: 382 KGNCILFTDQYFCSTEDDGGLWKNHGIGVFNLDNGSIGPISSYNGYAELFWPPPSWICSP 441
Query: 213 SSIE 224
I+
Sbjct: 442 QPID 445
>ref|XP_016469223.1| PREDICTED: F-box protein SKIP23-like, partial [Nicotiana tabacum]
Length = 454
Score = 89.0 bits (219), Expect = 2e-17
Identities = 37/64 (57%), Positives = 50/64 (78%), Gaps = 2/64 (3%)
Frame = +3
Query: 39 KGNCIFFTDQY-CNREDDG-LWKSRGVGVFDLESGSIGPIGNHIGYSRMFWPPPDWVYST 212
KGNCI FTDQ+ C+ EDDG +WK+ G+GVF L++GSIGPI ++ GY+ +FWPPP W+ S
Sbjct: 381 KGNCILFTDQFFCSTEDDGGMWKNHGIGVFSLDNGSIGPISSYNGYAELFWPPPSWICSP 440
Query: 213 SSIE 224
I+
Sbjct: 441 QPID 444
>ref|XP_009609927.1| PREDICTED: F-box protein SKIP23 isoform X1 [Nicotiana
tomentosiformis]
Length = 455
Score = 89.0 bits (219), Expect = 2e-17
Identities = 37/64 (57%), Positives = 50/64 (78%), Gaps = 2/64 (3%)
Frame = +3
Query: 39 KGNCIFFTDQY-CNREDDG-LWKSRGVGVFDLESGSIGPIGNHIGYSRMFWPPPDWVYST 212
KGNCI FTDQ+ C+ EDDG +WK+ G+GVF L++GSIGPI ++ GY+ +FWPPP W+ S
Sbjct: 381 KGNCILFTDQFFCSTEDDGGMWKNHGIGVFSLDNGSIGPISSYNGYAELFWPPPSWICSP 440
Query: 213 SSIE 224
I+
Sbjct: 441 QPID 444
>ref|XP_009802630.1| PREDICTED: F-box protein SKIP23 isoform X1 [Nicotiana sylvestris]
Length = 414
Score = 87.8 bits (216), Expect = 3e-17
Identities = 37/64 (57%), Positives = 50/64 (78%), Gaps = 2/64 (3%)
Frame = +3
Query: 39 KGNCIFFTDQY-CNREDDG-LWKSRGVGVFDLESGSIGPIGNHIGYSRMFWPPPDWVYST 212
KGNCI FTDQ+ C+ EDDG LWK+ G+G+F L++GSIGPI ++ GY+ +FWPPP W+ S
Sbjct: 340 KGNCILFTDQFFCSTEDDGGLWKNYGIGLFSLDNGSIGPISSYNGYAELFWPPPSWICSP 399
Query: 213 SSIE 224
I+
Sbjct: 400 QPID 403
>ref|XP_015060004.1| PREDICTED: F-box protein SKIP23-like [Solanum pennellii]
Length = 406
Score = 87.0 bits (214), Expect = 6e-17
Identities = 41/72 (56%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
Frame = +3
Query: 39 KGNCIFFTDQY-CNREDDG-LWKSRGVGVFDLESGSIGPIGNHIGYSRMFWPPPDWVYST 212
KGNCI F+DQ+ C+ EDDG WK G+GVF LE+GSI PI GY+ +FWPPP W+ S
Sbjct: 335 KGNCILFSDQFFCSTEDDGGFWKHHGIGVFSLENGSICPINCCRGYAELFWPPPPWICSP 394
Query: 213 SSIEAGLNGLNI 248
+I+A LN L I
Sbjct: 395 PTIDAELNELKI 406
>gb|PLY71813.1| hypothetical protein LSAT_3X47300 [Lactuca sativa]
Length = 1829
Score = 87.4 bits (215), Expect = 8e-17
Identities = 39/57 (68%), Positives = 47/57 (82%)
Frame = +3
Query: 39 KGNCIFFTDQYCNREDDGLWKSRGVGVFDLESGSIGPIGNHIGYSRMFWPPPDWVYS 209
KGNC+FFT +REDDGL K+RGVGVFDLESGSIGPI N+ S++FWPPP W++S
Sbjct: 333 KGNCVFFTG--LSREDDGLMKNRGVGVFDLESGSIGPIANNSANSQLFWPPPPWLHS 387