BLASTX nr result
ID: Rehmannia32_contig00024217
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia32_contig00024217
(392 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CDP08889.1| unnamed protein product [Coffea canephora] 120 2e-33
gb|PIN16245.1| Alternative splicing factor SRp55/B52/SRp75 (RRM ... 99 9e-23
ref|XP_020552662.1| serine/arginine-rich splicing factor RS41 is... 99 1e-22
ref|XP_012843655.1| PREDICTED: serine/arginine-rich splicing fac... 94 6e-21
ref|XP_022873219.1| serine/arginine-rich splicing factor RS40-li... 72 1e-20
ref|XP_022873220.1| serine/arginine-rich splicing factor RS40-li... 72 1e-20
emb|CBI38777.3| unnamed protein product, partial [Vitis vinifera] 92 1e-20
gb|KYP76979.1| Arginine/serine-rich-splicing factor RSP41 [Cajan... 89 2e-20
ref|XP_022896239.1| serine/arginine-rich splicing factor RS41-li... 62 9e-16
ref|XP_022896240.1| serine/arginine-rich splicing factor RS40-li... 62 9e-16
ref|XP_011091491.1| serine/arginine-rich splicing factor RS41 is... 77 2e-14
emb|CBI31840.3| unnamed protein product, partial [Vitis vinifera] 72 2e-14
gb|ACU23673.1| unknown [Glycine max] 74 2e-13
gb|KHN27280.1| Arginine/serine-rich-splicing factor RSP41 [Glyci... 75 3e-13
ref|XP_003521329.1| PREDICTED: serine/arginine-rich splicing fac... 74 3e-13
ref|XP_003528886.1| PREDICTED: serine/arginine-rich splicing fac... 74 3e-13
gb|AGE46160.1| arginine/serine-rich splicing factor RS27 transcr... 70 3e-13
gb|OAO95890.1| RS41 [Arabidopsis thaliana] 69 5e-13
ref|XP_002273751.1| PREDICTED: serine/arginine-rich splicing fac... 73 6e-13
ref|XP_023898798.1| serine/arginine-rich splicing factor RS41-li... 73 6e-13
>emb|CDP08889.1| unnamed protein product [Coffea canephora]
Length = 70
Score = 120 bits (302), Expect = 2e-33
Identities = 55/65 (84%), Positives = 62/65 (95%)
Frame = +1
Query: 28 MKPIFCGNLEFDARQSDLERLFRRYGRVDRVDMKSGLLGYSMIFLNGWFSAFIFWLVPKI 207
M+PIFCGNLEFDARQSD+ERLFR+YG+V+RVDMKSGLLG SMIFL+GWFSA +FWLVPKI
Sbjct: 1 MRPIFCGNLEFDARQSDVERLFRKYGKVERVDMKSGLLGLSMIFLDGWFSASLFWLVPKI 60
Query: 208 HVLVF 222
HV VF
Sbjct: 61 HVNVF 65
>gb|PIN16245.1| Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily)
[Handroanthus impetiginosus]
Length = 269
Score = 99.4 bits (246), Expect = 9e-23
Identities = 46/48 (95%), Positives = 47/48 (97%)
Frame = +3
Query: 249 MVLPSYTFLRPLPFAFLMTLPSLQFPTCFNIDIMFIPDPVAGFAFVYM 392
MV PS+TFLRPLPFAFLMTLPSLQFPTCFNIDIMFIPDPVAGFAFVYM
Sbjct: 1 MVPPSFTFLRPLPFAFLMTLPSLQFPTCFNIDIMFIPDPVAGFAFVYM 48
>ref|XP_020552662.1| serine/arginine-rich splicing factor RS41 isoform X1 [Sesamum
indicum]
ref|XP_020552665.1| serine/arginine-rich splicing factor RS41 isoform X1 [Sesamum
indicum]
Length = 255
Score = 98.6 bits (244), Expect = 1e-22
Identities = 46/48 (95%), Positives = 46/48 (95%)
Frame = +3
Query: 249 MVLPSYTFLRPLPFAFLMTLPSLQFPTCFNIDIMFIPDPVAGFAFVYM 392
MV P YTFLRPLPFAFLMTLPSLQFPTCFNIDIMFIPDPVAGFAFVYM
Sbjct: 1 MVPPFYTFLRPLPFAFLMTLPSLQFPTCFNIDIMFIPDPVAGFAFVYM 48
>ref|XP_012843655.1| PREDICTED: serine/arginine-rich splicing factor RS40-like isoform
X1 [Erythranthe guttata]
Length = 259
Score = 94.4 bits (233), Expect = 6e-21
Identities = 45/48 (93%), Positives = 45/48 (93%)
Frame = +3
Query: 249 MVLPSYTFLRPLPFAFLMTLPSLQFPTCFNIDIMFIPDPVAGFAFVYM 392
MV PSYTFLR LPFAFLMTL SLQFPTCFNIDIMFIPDPVAGFAFVYM
Sbjct: 1 MVPPSYTFLRSLPFAFLMTLHSLQFPTCFNIDIMFIPDPVAGFAFVYM 48
>ref|XP_022873219.1| serine/arginine-rich splicing factor RS40-like isoform X1 [Olea
europaea var. sylvestris]
Length = 286
Score = 71.6 bits (174), Expect(2) = 1e-20
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = +2
Query: 164 MDGSLRLFSGLCPRYMFLCLFERTNMICHGPTILHFPETIAF 289
MDGSL L S L PR+MF CLF+RTNM+C GPTILHFP+TI F
Sbjct: 1 MDGSLHLLSDLYPRFMFFCLFKRTNMLCDGPTILHFPKTIVF 42
Score = 55.8 bits (133), Expect(2) = 1e-20
Identities = 26/41 (63%), Positives = 32/41 (78%)
Frame = +3
Query: 270 FLRPLPFAFLMTLPSLQFPTCFNIDIMFIPDPVAGFAFVYM 392
F + + FAFL++L S+QFPTC I I FI DP+AGFAFVYM
Sbjct: 36 FPKTIVFAFLLSLLSIQFPTCSQIYIKFISDPMAGFAFVYM 76
>ref|XP_022873220.1| serine/arginine-rich splicing factor RS40-like isoform X2 [Olea
europaea var. sylvestris]
Length = 285
Score = 71.6 bits (174), Expect(2) = 1e-20
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = +2
Query: 164 MDGSLRLFSGLCPRYMFLCLFERTNMICHGPTILHFPETIAF 289
MDGSL L S L PR+MF CLF+RTNM+C GPTILHFP+TI F
Sbjct: 1 MDGSLHLLSDLYPRFMFFCLFKRTNMLCDGPTILHFPKTIVF 42
Score = 55.8 bits (133), Expect(2) = 1e-20
Identities = 26/41 (63%), Positives = 32/41 (78%)
Frame = +3
Query: 270 FLRPLPFAFLMTLPSLQFPTCFNIDIMFIPDPVAGFAFVYM 392
F + + FAFL++L S+QFPTC I I FI DP+AGFAFVYM
Sbjct: 36 FPKTIVFAFLLSLLSIQFPTCSQIYIKFISDPMAGFAFVYM 76
>emb|CBI38777.3| unnamed protein product, partial [Vitis vinifera]
Length = 183
Score = 91.7 bits (226), Expect = 1e-20
Identities = 52/107 (48%), Positives = 61/107 (57%), Gaps = 1/107 (0%)
Frame = +1
Query: 22 RIMKPIFCGNLEFDARQSDLERLFRRYGRVDRVDMKSGLLGYSMIFLNGW-FSAFIFWLV 198
R MKPIFCGNLE+DARQSD+ERLFRRYG+VDRVD+KSGLLG M+ L+GW F +
Sbjct: 77 RNMKPIFCGNLEYDARQSDVERLFRRYGKVDRVDLKSGLLGMPMLLLDGWALLHFFSSIC 136
Query: 199 PKIHVLVFVRKNQYDLPWSYHPTXXXXXXXXXXXXXXPVFNFRHVST 339
P L F + + V NFRHVST
Sbjct: 137 PDFAFLCFSGRTNLICNGTTILHSLRHHCLFIPHDLCSVLNFRHVST 183
>gb|KYP76979.1| Arginine/serine-rich-splicing factor RSP41 [Cajanus cajan]
Length = 102
Score = 89.0 bits (219), Expect = 2e-20
Identities = 51/104 (49%), Positives = 62/104 (59%)
Frame = +1
Query: 28 MKPIFCGNLEFDARQSDLERLFRRYGRVDRVDMKSGLLGYSMIFLNGWFSAFIFWLVPKI 207
M+P+FCGNL+FDARQSD+ERLFRRYG+VDRVDMKS +G SM+FL+G S F +
Sbjct: 1 MRPVFCGNLDFDARQSDVERLFRRYGKVDRVDMKS--VGMSMLFLDGCASLHFFSRMCPS 58
Query: 208 HVLVFVRKNQYDLPWSYHPTXXXXXXXXXXXXXXPVFNFRHVST 339
L F R+N P VFNF+HVST
Sbjct: 59 FSLYFSRRNNLIRPSPAILHFLSIHCFFIPHDFCSVFNFQHVST 102
>ref|XP_022896239.1| serine/arginine-rich splicing factor RS41-like isoform X5 [Olea
europaea var. sylvestris]
Length = 270
Score = 62.4 bits (150), Expect(2) = 9e-16
Identities = 29/41 (70%), Positives = 33/41 (80%)
Frame = +3
Query: 270 FLRPLPFAFLMTLPSLQFPTCFNIDIMFIPDPVAGFAFVYM 392
F + FAFL++L S+QFPTC NIDI FI DPVAGFAFVYM
Sbjct: 21 FPETITFAFLLSLLSIQFPTCSNIDIKFISDPVAGFAFVYM 61
Score = 48.5 bits (114), Expect(2) = 9e-16
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +2
Query: 209 MFLCLFERTNMICHGPTILHFPETIAF 289
MFLCLF+RTNM+ GPTIL FPETI F
Sbjct: 1 MFLCLFKRTNMLYDGPTILQFPETITF 27
>ref|XP_022896240.1| serine/arginine-rich splicing factor RS40-like isoform X6 [Olea
europaea var. sylvestris]
Length = 269
Score = 62.4 bits (150), Expect(2) = 9e-16
Identities = 29/41 (70%), Positives = 33/41 (80%)
Frame = +3
Query: 270 FLRPLPFAFLMTLPSLQFPTCFNIDIMFIPDPVAGFAFVYM 392
F + FAFL++L S+QFPTC NIDI FI DPVAGFAFVYM
Sbjct: 21 FPETITFAFLLSLLSIQFPTCSNIDIKFISDPVAGFAFVYM 61
Score = 48.5 bits (114), Expect(2) = 9e-16
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +2
Query: 209 MFLCLFERTNMICHGPTILHFPETIAF 289
MFLCLF+RTNM+ GPTIL FPETI F
Sbjct: 1 MFLCLFKRTNMLYDGPTILQFPETITF 27
>ref|XP_011091491.1| serine/arginine-rich splicing factor RS41 isoform X2 [Sesamum
indicum]
ref|XP_011091500.1| serine/arginine-rich splicing factor RS41 isoform X2 [Sesamum
indicum]
ref|XP_011091508.1| serine/arginine-rich splicing factor RS41 isoform X2 [Sesamum
indicum]
Length = 251
Score = 77.0 bits (188), Expect = 2e-14
Identities = 35/37 (94%), Positives = 37/37 (100%)
Frame = +1
Query: 25 IMKPIFCGNLEFDARQSDLERLFRRYGRVDRVDMKSG 135
IM+PIFCGNLEFDARQSD+ERLFRRYGRVDRVDMKSG
Sbjct: 2 IMRPIFCGNLEFDARQSDVERLFRRYGRVDRVDMKSG 38
>emb|CBI31840.3| unnamed protein product, partial [Vitis vinifera]
Length = 50
Score = 72.0 bits (175), Expect = 2e-14
Identities = 31/37 (83%), Positives = 36/37 (97%)
Frame = +1
Query: 28 MKPIFCGNLEFDARQSDLERLFRRYGRVDRVDMKSGL 138
M+PIFCGN ++DARQSDLERLFRRYG+VDRVDMK+GL
Sbjct: 13 MRPIFCGNFDYDARQSDLERLFRRYGKVDRVDMKTGL 49
>gb|ACU23673.1| unknown [Glycine max]
Length = 234
Score = 73.9 bits (180), Expect = 2e-13
Identities = 32/36 (88%), Positives = 36/36 (100%)
Frame = +1
Query: 28 MKPIFCGNLEFDARQSDLERLFRRYGRVDRVDMKSG 135
MKP+FCGNL+FDARQSD+ERLFRRYG+VDRVDMKSG
Sbjct: 1 MKPVFCGNLDFDARQSDVERLFRRYGKVDRVDMKSG 36
>gb|KHN27280.1| Arginine/serine-rich-splicing factor RSP41 [Glycine soja]
Length = 309
Score = 74.7 bits (182), Expect = 3e-13
Identities = 35/52 (67%), Positives = 44/52 (84%), Gaps = 3/52 (5%)
Frame = +1
Query: 28 MKPIFCGNLEFDARQSDLERLFRRYGRVDRVDMKSGLL---GYSMIFLNGWF 174
MKP+FCGNL+FDARQSD+ERLFRRYG+VDRVDMKS L G++M + +G +
Sbjct: 1 MKPVFCGNLDFDARQSDVERLFRRYGKVDRVDMKSVLFCCAGFAMWYWDGLY 52
>ref|XP_003521329.1| PREDICTED: serine/arginine-rich splicing factor RS41-like isoform
X1 [Glycine max]
gb|KRH65157.1| hypothetical protein GLYMA_03G017200 [Glycine max]
Length = 252
Score = 73.9 bits (180), Expect = 3e-13
Identities = 32/36 (88%), Positives = 36/36 (100%)
Frame = +1
Query: 28 MKPIFCGNLEFDARQSDLERLFRRYGRVDRVDMKSG 135
MKP+FCGNL+FDARQSD+ERLFRRYG+VDRVDMKSG
Sbjct: 1 MKPVFCGNLDFDARQSDVERLFRRYGKVDRVDMKSG 36
>ref|XP_003528886.1| PREDICTED: serine/arginine-rich splicing factor RS41-like isoform
X1 [Glycine max]
gb|KHN04616.1| Arginine/serine-rich-splicing factor RSP41 [Glycine soja]
gb|KRH48256.1| hypothetical protein GLYMA_07G078300 [Glycine max]
gb|KRH48257.1| hypothetical protein GLYMA_07G078300 [Glycine max]
Length = 253
Score = 73.9 bits (180), Expect = 3e-13
Identities = 32/36 (88%), Positives = 36/36 (100%)
Frame = +1
Query: 28 MKPIFCGNLEFDARQSDLERLFRRYGRVDRVDMKSG 135
MKP+FCGNL+FDARQSD+ERLFRRYG+VDRVDMKSG
Sbjct: 1 MKPVFCGNLDFDARQSDVERLFRRYGKVDRVDMKSG 36
>gb|AGE46160.1| arginine/serine-rich splicing factor RS27 transcript II
[Physcomitrella patens]
Length = 100
Score = 70.5 bits (171), Expect = 3e-13
Identities = 30/64 (46%), Positives = 47/64 (73%), Gaps = 2/64 (3%)
Frame = +1
Query: 28 MKPIFCGNLEFDARQSDLERLFRRYGRVDRVDMKSGLLGYSM--IFLNGWFSAFIFWLVP 201
++P++CGN E+DARQS++ERLF+ YGRV+RVDMK+G+ SM + L W F +++ P
Sbjct: 5 IRPVYCGNFEYDARQSEIERLFKEYGRVERVDMKTGMSMKSMAALLLAVWLRIFHYYMAP 64
Query: 202 KIHV 213
++
Sbjct: 65 PANI 68
>gb|OAO95890.1| RS41 [Arabidopsis thaliana]
Length = 76
Score = 69.3 bits (168), Expect = 5e-13
Identities = 28/42 (66%), Positives = 38/42 (90%)
Frame = +1
Query: 28 MKPIFCGNLEFDARQSDLERLFRRYGRVDRVDMKSGLLGYSM 153
MKP+FCGN E+DAR+SDLERLFR+YG+V+RVDMK+G + + +
Sbjct: 1 MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGKICFDL 42
>ref|XP_002273751.1| PREDICTED: serine/arginine-rich splicing factor RS41 isoform X1
[Vitis vinifera]
Length = 252
Score = 73.2 bits (178), Expect = 6e-13
Identities = 32/36 (88%), Positives = 36/36 (100%)
Frame = +1
Query: 28 MKPIFCGNLEFDARQSDLERLFRRYGRVDRVDMKSG 135
MKPIFCGNLE+DARQSD+ERLFRRYG+VDRVD+KSG
Sbjct: 1 MKPIFCGNLEYDARQSDVERLFRRYGKVDRVDLKSG 36
>ref|XP_023898798.1| serine/arginine-rich splicing factor RS41-like isoform X1 [Quercus
suber]
ref|XP_023898799.1| serine/arginine-rich splicing factor RS41-like isoform X1 [Quercus
suber]
gb|POE52792.1| serine/arginine-rich splicing factor rs40 [Quercus suber]
Length = 260
Score = 73.2 bits (178), Expect = 6e-13
Identities = 32/36 (88%), Positives = 36/36 (100%)
Frame = +1
Query: 28 MKPIFCGNLEFDARQSDLERLFRRYGRVDRVDMKSG 135
M+PIFCGN+EFDARQSD+ERLFRRYGRV+RVDMKSG
Sbjct: 1 MRPIFCGNVEFDARQSDIERLFRRYGRVERVDMKSG 36