BLASTX nr result

ID: Rehmannia32_contig00024168 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00024168
         (434 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022866776.1| uncharacterized protein LOC111386548 [Olea e...    60   1e-07
gb|KYP51126.1| Retrovirus-related Pol polyprotein from transposo...    57   1e-06
dbj|GAU15801.1| hypothetical protein TSUD_236170 [Trifolium subt...    57   2e-06
gb|KYP40816.1| Retrovirus-related Pol polyprotein from transposo...    55   5e-06

>ref|XP_022866776.1| uncharacterized protein LOC111386548 [Olea europaea var.
           sylvestris]
          Length = 529

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 24/45 (53%), Positives = 36/45 (80%)
 Frame = +2

Query: 296 YMLKHKSDTRLHLESFVQMVLT*FSKKIKVLRSDNGTEFFLPDFY 430
           +M++ KS+T  H+++F QMV+  F+ KIK  R+DNGTEFF+P+FY
Sbjct: 440 FMMQSKSETHSHIKNFYQMVIAQFNTKIKTFRTDNGTEFFMPEFY 484


>gb|KYP51126.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 289

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 25/44 (56%), Positives = 34/44 (77%)
 Frame = +2

Query: 302 LKHKSDTRLHLESFVQMVLT*FSKKIKVLRSDNGTEFFLPDFYK 433
           LKHKS+T +HL SF QMV T F+  IK +R++NG++FFL  FY+
Sbjct: 229 LKHKSETEVHLRSFTQMVETQFNTTIKTIRTNNGSKFFLASFYR 272


>dbj|GAU15801.1| hypothetical protein TSUD_236170 [Trifolium subterraneum]
          Length = 1263

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 25/45 (55%), Positives = 33/45 (73%)
 Frame = +2

Query: 296 YMLKHKSDTRLHLESFVQMVLT*FSKKIKVLRSDNGTEFFLPDFY 430
           Y+++ KS+   H+++F QMV T F   IK +RSDNGTEFFL DFY
Sbjct: 475 YLMRLKSEASTHIKTFCQMVKTQFETSIKCIRSDNGTEFFLKDFY 519


>gb|KYP40816.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1298

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 21/45 (46%), Positives = 35/45 (77%)
 Frame = +2

Query: 296 YMLKHKSDTRLHLESFVQMVLT*FSKKIKVLRSDNGTEFFLPDFY 430
           +++K KS+TR  +++F+ +  T + KK+K++RSDNG EF +PDFY
Sbjct: 630 FLMKAKSETRTLIQNFISLTFTQYKKKVKIIRSDNGIEFRMPDFY 674


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