BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00024093
         (508 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABG37671.1| integrase [Populus trichocarpa]                        142   4e-36
gb|ABG37670.1| integrase [Populus trichocarpa]                        140   1e-35
ref|XP_011006379.1| PREDICTED: uncharacterized protein LOC105112...   135   3e-34
ref|XP_015387519.1| PREDICTED: uncharacterized protein LOC107177...   121   1e-31
ref|XP_024042762.1| uncharacterized protein LOC112099576 [Citrus...   120   3e-28
ref|XP_024043092.1| uncharacterized protein LOC112099834 [Citrus...   120   3e-28
ref|XP_024037605.1| LOW QUALITY PROTEIN: uncharacterized protein...   118   1e-27
gb|PON38683.1| hypothetical protein PanWU01x14_310810, partial [...   103   2e-25
ref|XP_024043336.1| LOW QUALITY PROTEIN: uncharacterized protein...   112   2e-25
ref|XP_024039289.1| LOW QUALITY PROTEIN: uncharacterized protein...   105   3e-23
ref|XP_015389784.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    96   6e-20
gb|PON53295.1| Viral nucleic acid binding [Parasponia andersonii]      87   8e-19
ref|XP_018501907.1| PREDICTED: uncharacterized protein LOC103942...    90   1e-17
gb|ABG37659.1| integrase, partial [Populus trichocarpa]                88   4e-17
gb|ABG37656.1| integrase [Populus trichocarpa]                         84   1e-15
ref|XP_015381681.1| PREDICTED: uncharacterized protein LOC102624...    81   1e-14
gb|ABG37658.1| integrase [Populus trichocarpa]                         79   7e-14
ref|XP_011006381.1| PREDICTED: uncharacterized protein LOC105112...    78   1e-13
ref|XP_024039259.1| uncharacterized protein LOC112097899 [Citrus...    75   1e-12
ref|XP_024041540.1| uncharacterized protein LOC112098940 [Citrus...    75   1e-12

>gb|ABG37671.1| integrase [Populus trichocarpa]
          Length = 1332

 Score =  142 bits (359), Expect = 4e-36
 Identities = 71/109 (65%), Positives = 80/109 (73%)
 Frame = +2

Query: 182  NEILKIYKARLERLRMFMNKGIPEDIRWIIEAKVRLAGEFSFSPTKCMPGFGXXXXXXXX 361
            N I KIY+AR  RLR+ MN GIPEDIRW+IEAKV+L+G+ S S    MPG G        
Sbjct: 1168 NAITKIYRARCARLRLLMNHGIPEDIRWLIEAKVQLSGDSSNSFISYMPGTGKSTFAKKR 1227

Query: 362  XXXXLQVCHKCARWTCDTRCRSLGMVSRNREDKIQFIKDGLSKESLDNI 508
                L+VCHKCARWTC+  CRSLGMVS NREDKIQFIKDGLSK SLDN+
Sbjct: 1228 RAKRLKVCHKCARWTCNATCRSLGMVSINREDKIQFIKDGLSKGSLDNL 1276


>gb|ABG37670.1| integrase [Populus trichocarpa]
          Length = 649

 Score =  140 bits (353), Expect = 1e-35
 Identities = 75/131 (57%), Positives = 88/131 (67%)
 Frame = +2

Query: 116 FLKKMDKRIPPTLKKRFDFLSTNEILKIYKARLERLRMFMNKGIPEDIRWIIEAKVRLAG 295
           F  KMD  +   LKK F  L  N I KIY AR ERLR+ MN GIPEDIRW+IEAKVRL+G
Sbjct: 478 FKLKMDTTLEK-LKKNFPALPQNAITKIYCARCERLRLLMNHGIPEDIRWLIEAKVRLSG 536

Query: 296 EFSFSPTKCMPGFGXXXXXXXXXXXXLQVCHKCARWTCDTRCRSLGMVSRNREDKIQFIK 475
           + +F+  +                  L+VCH+CARWTC+  CRSLGM+S NREDKIQFIK
Sbjct: 537 KSTFAKKR--------------RAKQLKVCHRCARWTCNATCRSLGMISVNREDKIQFIK 582

Query: 476 DGLSKESLDNI 508
           DGLSK SLDN+
Sbjct: 583 DGLSKGSLDNL 593


>ref|XP_011006379.1| PREDICTED: uncharacterized protein LOC105112382 [Populus
           euphratica]
          Length = 561

 Score =  135 bits (341), Expect = 3e-34
 Identities = 70/114 (61%), Positives = 81/114 (71%)
 Frame = +2

Query: 167 DFLSTNEILKIYKARLERLRMFMNKGIPEDIRWIIEAKVRLAGEFSFSPTKCMPGFGXXX 346
           D +  N I KIY+AR  RLR+ MN GIPEDIRW+I+AK RL+ E S S    M   G   
Sbjct: 392 DNVFKNAITKIYRARCARLRLLMNHGIPEDIRWLIKAKDRLSCESSNSFISHMSRTGKST 451

Query: 347 XXXXXXXXXLQVCHKCARWTCDTRCRSLGMVSRNREDKIQFIKDGLSKESLDNI 508
                    L+VCH+CARWTC+T+CRSLGMVS NREDKIQFIKDGLSKESLDN+
Sbjct: 452 FVKKHRAKRLKVCHRCARWTCNTQCRSLGMVSINREDKIQFIKDGLSKESLDNL 505


>ref|XP_015387519.1| PREDICTED: uncharacterized protein LOC107177719 [Citrus sinensis]
          Length = 184

 Score =  121 bits (303), Expect = 1e-31
 Identities = 68/127 (53%), Positives = 77/127 (60%), Gaps = 2/127 (1%)
 Frame = +2

Query: 134 KRIPPTLKKRFDFLSTNEILKIYKARLERLRMFMNKGIPEDIRWIIEAKVRLAGEFSFSP 313
           + I   L K F  L  N + KIYKAR ERLR+ M  GIP DIRW+IEAKVRL GEFS   
Sbjct: 2   EEIQHKLHKHFPSLPQNALRKIYKARCERLRLLMINGIPSDIRWLIEAKVRLVGEFSDPF 61

Query: 314 TKCMPGFGXXXXXXXXXXXXL-QVCHKCARWTCD-TRCRSLGMVSRNREDKIQFIKDGLS 487
              MPGFG            L   CH C R  C    C+SLGMVS  REDKI+F+KDG+S
Sbjct: 62  VSYMPGFGKSTFAKKRRAKRLGSKCHNCVRLGCKRPDCKSLGMVSDTREDKIKFVKDGMS 121

Query: 488 KESLDNI 508
           KE LD+I
Sbjct: 122 KELLDDI 128


>ref|XP_024042762.1| uncharacterized protein LOC112099576 [Citrus clementina]
          Length = 1343

 Score =  120 bits (300), Expect = 3e-28
 Identities = 65/111 (58%), Positives = 73/111 (65%), Gaps = 2/111 (1%)
 Frame = +2

Query: 182  NEILKIYKARLERLRMFMNKGIPEDIRWIIEAKVRLAGEFSFSPTKCMPGFGXXXXXXXX 361
            N + KIYKAR ERLR+ M  GIP DIRW+IEAKVRLAGEFS      MPGFG        
Sbjct: 1177 NALRKIYKARCERLRLLMINGIPSDIRWLIEAKVRLAGEFSGQFVSYMPGFGKSTFAKKR 1236

Query: 362  XXXXL-QVCHKCARWTCD-TRCRSLGMVSRNREDKIQFIKDGLSKESLDNI 508
                L   CH C R  C    C+SLGMVS  REDKI+F+KDG+SKESLD+I
Sbjct: 1237 RAKRLGSKCHNCVRLGCKRPDCKSLGMVSDTREDKIKFVKDGMSKESLDDI 1287


>ref|XP_024043092.1| uncharacterized protein LOC112099834 [Citrus clementina]
          Length = 1514

 Score =  120 bits (300), Expect = 3e-28
 Identities = 65/111 (58%), Positives = 73/111 (65%), Gaps = 2/111 (1%)
 Frame = +2

Query: 182  NEILKIYKARLERLRMFMNKGIPEDIRWIIEAKVRLAGEFSFSPTKCMPGFGXXXXXXXX 361
            N + KIYKAR ERLR+ M  GIP DIRW+IEAKVRLAGEFS      MPGFG        
Sbjct: 1348 NALRKIYKARCERLRLLMINGIPSDIRWLIEAKVRLAGEFSGQFVSYMPGFGKSTFVKKR 1407

Query: 362  XXXXL-QVCHKCARWTCD-TRCRSLGMVSRNREDKIQFIKDGLSKESLDNI 508
                L   CH C R  C    C+SLGMVS  REDKI+F+KDG+SKESLD+I
Sbjct: 1408 RAKRLGSKCHNCVRLGCKRPDCKSLGMVSDTREDKIKFVKDGMSKESLDDI 1458


>ref|XP_024037605.1| LOW QUALITY PROTEIN: uncharacterized protein LOC112097216 [Citrus
            clementina]
          Length = 1856

 Score =  118 bits (295), Expect = 1e-27
 Identities = 64/111 (57%), Positives = 73/111 (65%), Gaps = 2/111 (1%)
 Frame = +2

Query: 182  NEILKIYKARLERLRMFMNKGIPEDIRWIIEAKVRLAGEFSFSPTKCMPGFGXXXXXXXX 361
            N + KIYKAR ERLR+ M  GIP DIRW+IEAKVRLAGEFS      MPGFG        
Sbjct: 1690 NALKKIYKARCERLRLLMINGIPSDIRWLIEAKVRLAGEFSDPFVSYMPGFGKSTFAKKR 1749

Query: 362  XXXXL-QVCHKCARWTCD-TRCRSLGMVSRNREDKIQFIKDGLSKESLDNI 508
                L   CH C R  C    C+SLGMVS  R+DKI+F+KDG+SKESLD+I
Sbjct: 1750 RAKRLGSKCHNCVRLGCKRPDCKSLGMVSDTRKDKIKFVKDGMSKESLDDI 1800


>gb|PON38683.1| hypothetical protein PanWU01x14_310810, partial [Parasponia
           andersonii]
          Length = 104

 Score =  103 bits (256), Expect = 2e-25
 Identities = 51/91 (56%), Positives = 61/91 (67%)
 Frame = +2

Query: 233 MNKGIPEDIRWIIEAKVRLAGEFSFSPTKCMPGFGXXXXXXXXXXXXLQVCHKCARWTCD 412
           M   I ED+RWIIEAKVRL+GEF  S    +P               ++VCHKCARWT +
Sbjct: 1   MYMDISEDVRWIIEAKVRLSGEFLNSFVSYIPDHSKSSFVKKRRAKRMKVCHKCARWTYN 60

Query: 413 TRCRSLGMVSRNREDKIQFIKDGLSKESLDN 505
           T+C SLG+VS NREDKI FIKDG+SK SLD+
Sbjct: 61  TKCHSLGIVSTNREDKINFIKDGMSKGSLDD 91


>ref|XP_024043336.1| LOW QUALITY PROTEIN: uncharacterized protein LOC112100001 [Citrus
            clementina]
          Length = 1512

 Score =  112 bits (279), Expect = 2e-25
 Identities = 62/111 (55%), Positives = 70/111 (63%), Gaps = 2/111 (1%)
 Frame = +2

Query: 182  NEILKIYKARLERLRMFMNKGIPEDIRWIIEAKVRLAGEFSFSPTKCMPGFGXXXXXXXX 361
            N + KIYKAR ERLR+ M      DIRW+IEAKVRLAGEFS      MPGFG        
Sbjct: 1346 NALRKIYKARCERLRLLMQMAFLFDIRWLIEAKVRLAGEFSGQFVSYMPGFGKSTFVKKR 1405

Query: 362  XXXXL-QVCHKCARWTCD-TRCRSLGMVSRNREDKIQFIKDGLSKESLDNI 508
                L   CH C R  C    C+SLGMVS  REDKI+F+KDG+SKESLD+I
Sbjct: 1406 RAKRLGSKCHNCVRLGCKRPDCKSLGMVSDTREDKIKFVKDGMSKESLDDI 1456


>ref|XP_024039289.1| LOW QUALITY PROTEIN: uncharacterized protein LOC112097933 [Citrus
            clementina]
          Length = 1504

 Score =  105 bits (263), Expect = 3e-23
 Identities = 60/111 (54%), Positives = 69/111 (62%), Gaps = 2/111 (1%)
 Frame = +2

Query: 182  NEILKIYKARLERLRMFMNKGIPEDIRWIIEAKVRLAGEFSFSPTKCMPGFGXXXXXXXX 361
            N + KIYKAR ERLR+ M  GIP DIRW+IEAKVRLAGEFS      MPGFG        
Sbjct: 1348 NALRKIYKARCERLRLLMINGIPSDIRWLIEAKVRLAGEFSGQFVSYMPGFGKSTFAKKR 1407

Query: 362  XXXXL-QVCHKCARWTCD-TRCRSLGMVSRNREDKIQFIKDGLSKESLDNI 508
                L   CH C R  C    C+SLGMV    +  I+F+KDG+SKESLD+I
Sbjct: 1408 RAKRLGSKCHNCVRLGCKRPDCKSLGMVLILVKIXIKFVKDGMSKESLDDI 1458


>ref|XP_015389784.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC107178737 [Citrus sinensis]
          Length = 791

 Score = 96.3 bits (238), Expect = 6e-20
 Identities = 55/114 (48%), Positives = 63/114 (55%)
 Frame = +2

Query: 152 LKKRFDFLSTNEILKIYKARLERLRMFMNKGIPEDIRWIIEAKVRLAGEFSFSPTKCMPG 331
           L  RF  L  N +  IYKAR ER+R+ M   IP +I W+IEAKVRLAGE           
Sbjct: 456 LHNRFPSLPHNALFTIYKARSERMRLLMRNNIPANICWLIEAKVRLAGE----------- 504

Query: 332 FGXXXXXXXXXXXXLQVCHKCARWTCDTRCRSLGMVSRNREDKIQFIKDGLSKE 493
                            CHKCAR  C+    SLGMVS NREDKIQFI+DGL+KE
Sbjct: 505 -------KRRARSIYVACHKCARMRCNKNPCSLGMVSDNREDKIQFIRDGLNKE 551


>gb|PON53295.1| Viral nucleic acid binding [Parasponia andersonii]
          Length = 118

 Score = 86.7 bits (213), Expect = 8e-19
 Identities = 38/62 (61%), Positives = 45/62 (72%)
 Frame = +2

Query: 323 MPGFGXXXXXXXXXXXXLQVCHKCARWTCDTRCRSLGMVSRNREDKIQFIKDGLSKESLD 502
           MPG G            ++VCHKCARWTC+T+CRSLGM S NREDKI FIKDG+SK SLD
Sbjct: 1   MPGHGKSSFAKKRRAKRMKVCHKCARWTCNTKCRSLGMASTNREDKINFIKDGMSKRSLD 60

Query: 503 NI 508
           ++
Sbjct: 61  DL 62


>ref|XP_018501907.1| PREDICTED: uncharacterized protein LOC103942889 [Pyrus x
           bretschneideri]
          Length = 724

 Score = 89.7 bits (221), Expect = 1e-17
 Identities = 59/125 (47%), Positives = 68/125 (54%)
 Frame = +2

Query: 134 KRIPPTLKKRFDFLSTNEILKIYKARLERLRMFMNKGIPEDIRWIIEAKVRLAGEFSFSP 313
           K  P  + +RF   + N I KIY+AR  RLR+ MN GIPEDIRW+IEAKVRL+ E S + 
Sbjct: 614 KYCPDQIFQRFIPDNENAITKIYRARCARLRLLMNHGIPEDIRWLIEAKVRLSDE-SSNF 672

Query: 314 TKCMPGFGXXXXXXXXXXXXLQVCHKCARWTCDTRCRSLGMVSRNREDKIQFIKDGLSKE 493
              MPG                                 GMVS NREDKIQFIKD LSKE
Sbjct: 673 ISHMPG--------------------------------TGMVSINREDKIQFIKDDLSKE 700

Query: 494 SLDNI 508
           SLDN+
Sbjct: 701 SLDNL 705


>gb|ABG37659.1| integrase, partial [Populus trichocarpa]
          Length = 612

 Score = 88.2 bits (217), Expect = 4e-17
 Identities = 44/79 (55%), Positives = 53/79 (67%)
 Frame = +2

Query: 272 EAKVRLAGEFSFSPTKCMPGFGXXXXXXXXXXXXLQVCHKCARWTCDTRCRSLGMVSRNR 451
           + KVRL+GE S S    MP  G            L+VCH+CA+WTC+  C SLGM+S NR
Sbjct: 478 KTKVRLSGESSNSFISYMPETGKNTFAKKRHTKRLKVCHRCAKWTCNATCCSLGMISVNR 537

Query: 452 EDKIQFIKDGLSKESLDNI 508
           EDKIQFIK+GLSK SLDN+
Sbjct: 538 EDKIQFIKNGLSKGSLDNL 556


>gb|ABG37656.1| integrase [Populus trichocarpa]
          Length = 694

 Score = 84.0 bits (206), Expect = 1e-15
 Identities = 51/108 (47%), Positives = 58/108 (53%)
 Frame = +2

Query: 158 KRFDFLSTNEILKIYKARLERLRMFMNKGIPEDIRWIIEAKVRLAGEFSFSPTKCMPGFG 337
           K F  L  N I K Y+A+  RLR+ MN GIPEDIR +IEAK R A               
Sbjct: 518 KYFPALPPNAIAKNYRAKCARLRLLMNHGIPEDIRRLIEAKKRRAKR------------- 564

Query: 338 XXXXXXXXXXXXLQVCHKCARWTCDTRCRSLGMVSRNREDKIQFIKDG 481
                       L+VCH   RWTC+  CRSLGM+  N EDKIQFIKDG
Sbjct: 565 ------------LKVCH---RWTCNATCRSLGMIFVNCEDKIQFIKDG 597


>ref|XP_015381681.1| PREDICTED: uncharacterized protein LOC102624758 [Citrus sinensis]
          Length = 927

 Score = 80.9 bits (198), Expect = 1e-14
 Identities = 47/111 (42%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
 Frame = +2

Query: 158 KRFDFLSTNEILKIYKARLERLRMFMNKGIPEDIRWIIEAKVRLAGEFSFSPTKCMPGFG 337
           K F  L  N + KIYKAR ERLR+ M  GIP DIRW+IEAK + A               
Sbjct: 625 KHFPSLPQNALRKIYKARCERLRLLMINGIPSDIRWLIEAKKKRAKRLG----------- 673

Query: 338 XXXXXXXXXXXXLQVCHKCARWTCD-TRCRSLGMVSRNREDKIQFIKDGLS 487
                          C  C R  C+  RC++LGMVS N EDKI+F+KDG++
Sbjct: 674 -------------SKCPHCVRLACNKPRCKTLGMVSVNCEDKIKFVKDGMT 711


>gb|ABG37658.1| integrase [Populus trichocarpa]
          Length = 1139

 Score = 79.0 bits (193), Expect = 7e-14
 Identities = 50/114 (43%), Positives = 57/114 (50%)
 Frame = +2

Query: 167  DFLSTNEILKIYKARLERLRMFMNKGIPEDIRWIIEAKVRLAGEFSFSPTKCMPGFGXXX 346
            D +  N I KIY+AR  RLR+ MN GIP+DIRW+IEAKVRL+G                 
Sbjct: 1016 DNVFKNAITKIYRARCARLRLLMNHGIPKDIRWLIEAKVRLSG----------------- 1058

Query: 347  XXXXXXXXXLQVCHKCARWTCDTRCRSLGMVSRNREDKIQFIKDGLSKESLDNI 508
                                         MVS NREDKIQFIKDGLSK SLDN+
Sbjct: 1059 -----------------------------MVSINREDKIQFIKDGLSKGSLDNL 1083


>ref|XP_011006381.1| PREDICTED: uncharacterized protein LOC105112383 [Populus
           euphratica]
          Length = 479

 Score = 77.8 bits (190), Expect = 1e-13
 Identities = 54/148 (36%), Positives = 69/148 (46%), Gaps = 6/148 (4%)
 Frame = +2

Query: 83  IILFFHSLSFRFLKKMDKRIPPTL------KKRFDFLSTNEILKIYKARLERLRMFMNKG 244
           ++LF++S  + F +++  R               D +  N I KIY+AR  RLR+ MN G
Sbjct: 322 VVLFYNSQLYAFPRELRSRWSNPYGAFDIENSMNDNVFKNAITKIYRARCARLRLLMNHG 381

Query: 245 IPEDIRWIIEAKVRLAGEFSFSPTKCMPGFGXXXXXXXXXXXXLQVCHKCARWTCDTRCR 424
           IPEDIRW+IEA V+L+                                            
Sbjct: 382 IPEDIRWLIEAMVQLS-------------------------------------------- 397

Query: 425 SLGMVSRNREDKIQFIKDGLSKESLDNI 508
              MVS NREDKIQFIKDGLSKESLDN+
Sbjct: 398 --RMVSINREDKIQFIKDGLSKESLDNL 423


>ref|XP_024039259.1| uncharacterized protein LOC112097899 [Citrus clementina]
          Length = 779

 Score = 75.5 bits (184), Expect = 1e-12
 Identities = 47/109 (43%), Positives = 54/109 (49%)
 Frame = +2

Query: 182 NEILKIYKARLERLRMFMNKGIPEDIRWIIEAKVRLAGEFSFSPTKCMPGFGXXXXXXXX 361
           N + KIYKAR ERLR+ M  GIP DIRW+IEAKVRLA                       
Sbjct: 661 NALRKIYKARCERLRLLMINGIPSDIRWLIEAKVRLA----------------------- 697

Query: 362 XXXXLQVCHKCARWTCDTRCRSLGMVSRNREDKIQFIKDGLSKESLDNI 508
                                  GMVS  REDKI+F+KDG+SKESLD+I
Sbjct: 698 -----------------------GMVSDTREDKIKFVKDGMSKESLDDI 723


>ref|XP_024041540.1| uncharacterized protein LOC112098940 [Citrus clementina]
          Length = 1194

 Score = 75.5 bits (184), Expect = 1e-12
 Identities = 47/109 (43%), Positives = 54/109 (49%)
 Frame = +2

Query: 182  NEILKIYKARLERLRMFMNKGIPEDIRWIIEAKVRLAGEFSFSPTKCMPGFGXXXXXXXX 361
            N + KIYKAR ERLR+ M  GIP DIRW+IEAKVRLA                       
Sbjct: 1076 NALRKIYKARCERLRLLMINGIPSDIRWLIEAKVRLA----------------------- 1112

Query: 362  XXXXLQVCHKCARWTCDTRCRSLGMVSRNREDKIQFIKDGLSKESLDNI 508
                                   GMVS  REDKI+F+KDG+SKESLD+I
Sbjct: 1113 -----------------------GMVSDTREDKIKFVKDGMSKESLDDI 1138