BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00022078
         (502 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ARO38276.1| polyprotein [Citrus endogenous pararetrovirus]          50   8e-07

>gb|ARO38276.1| polyprotein [Citrus endogenous pararetrovirus]
          Length = 1362

 Score = 50.1 bits (118), Expect(2) = 8e-07
 Identities = 23/48 (47%), Positives = 30/48 (62%)
 Frame = -2

Query: 201 MLVEFSLRFVGILREWFLSIGEYRQLQLYNASTPPLVLRGIHQEFIGD 58
           +L EF+ RF G LR+WF S+G+YRQLQ          L  IH +F+GD
Sbjct: 397 VLREFATRFTGALRDWFDSLGQYRQLQFVQLPEVSSALAVIHDQFLGD 444



 Score = 30.4 bits (67), Expect(2) = 8e-07
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -1

Query: 283 NVPVQKRR*RLHSFAAWIDLQLTKEGSNACGILFE 179
           ++P  K R RL   +AWIDLQ+ + G+    +L E
Sbjct: 366 DLPSHKWRDRLTEMSAWIDLQMLRPGATTQSVLRE 400