BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00021835
         (383 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KJB09790.1| hypothetical protein B456_001G166300 [Gossypium r...    74   6e-27
ref|YP_009242020.1| NADH dehydrogenase subunit 4 (mitochondrion)...   104   2e-23
ref|YP_009242008.1| NADH dehydrogenase subunit 4 (mitochondrion)...   103   4e-23
gb|OIT05606.1| transcription factor myb39 [Nicotiana attenuata]        64   3e-09
ref|XP_013442825.1| NADH-quinone oxidoreductase protein [Medicag...    60   4e-09
gb|OQU84733.1| hypothetical protein SORBI_3004G115100 [Sorghum b...    61   3e-08
gb|KVH96778.1| hypothetical protein Ccrd_001132, partial [Cynara...    60   7e-08

>gb|KJB09790.1| hypothetical protein B456_001G166300 [Gossypium raimondii]
          Length = 571

 Score = 73.6 bits (179), Expect(3) = 6e-27
 Identities = 34/40 (85%), Positives = 36/40 (90%)
 Frame = +2

Query: 2   LYRSHSIFLPNEPFFLLILKTGLAFGSKGMVFSMSPDRAP 121
           LYR HSIFLPNEP +LL  KTG+AFGSKGMVFSMSPDRAP
Sbjct: 254 LYRPHSIFLPNEPIYLLTWKTGVAFGSKGMVFSMSPDRAP 293



 Score = 70.1 bits (170), Expect(3) = 6e-27
 Identities = 37/50 (74%), Positives = 41/50 (82%)
 Frame = +3

Query: 141 SGSFGRASTATQAPLFATTREAKDSRVQAENTCIDSGLMPRPTTEARDGA 290
           +G +GRAS ATQA LFATTR+AKDSRVQAENTCIDSGLM    T A DG+
Sbjct: 297 AGPYGRASPATQAALFATTRKAKDSRVQAENTCIDSGLM----TRADDGS 342



 Score = 25.0 bits (53), Expect(3) = 6e-27
 Identities = 10/11 (90%), Positives = 10/11 (90%)
 Frame = +1

Query: 349 LRPTTTGQLRF 381
           LRPTTTGQ RF
Sbjct: 354 LRPTTTGQFRF 364


>ref|YP_009242020.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
 gb|AMQ23374.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
          Length = 2992

 Score =  104 bits (260), Expect = 2e-23
 Identities = 63/96 (65%), Positives = 66/96 (68%)
 Frame = +1

Query: 94  FQYVSR*GPTSPAS**AVLSGGHLLQRKHHCSPPPEKQKIRESRLKIHA*IVV*CQGRRR 273
           F+  SR GPT          GGHL  RK H SPPPEKQKIRESR K  A +    +GRRR
Sbjct: 480 FRAGSRPGPT----------GGHLPLRKQHGSPPPEKQKIRESRRKRQA-LWSYHKGRRR 528

Query: 274 KLGTEPYEAEVSRTVL*EGSGYLLELRPTTTGQLRF 381
           KLGTEPY AEVSRTV  EGSGY LELRPTTTGQ RF
Sbjct: 529 KLGTEPYHAEVSRTVPREGSGYPLELRPTTTGQFRF 564


>ref|YP_009242008.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
 gb|AMQ23370.1| NADH dehydrogenase subunit 4 (mitochondrion) [Oryza minuta]
          Length = 2992

 Score =  103 bits (257), Expect = 4e-23
 Identities = 63/96 (65%), Positives = 65/96 (67%)
 Frame = +1

Query: 94  FQYVSR*GPTSPAS**AVLSGGHLLQRKHHCSPPPEKQKIRESRLKIHA*IVV*CQGRRR 273
           F+  SR GPT          GGHL  RK H SPPPEKQKIRESR K  A      +GRRR
Sbjct: 480 FRAGSRPGPT----------GGHLPLRKQHGSPPPEKQKIRESRRKRQAYWSY-HKGRRR 528

Query: 274 KLGTEPYEAEVSRTVL*EGSGYLLELRPTTTGQLRF 381
           KLGTEPY AEVSRTV  EGSGY LELRPTTTGQ RF
Sbjct: 529 KLGTEPYHAEVSRTVPREGSGYPLELRPTTTGQFRF 564


>gb|OIT05606.1| transcription factor myb39 [Nicotiana attenuata]
          Length = 373

 Score = 63.9 bits (154), Expect = 3e-09
 Identities = 31/47 (65%), Positives = 41/47 (87%), Gaps = 2/47 (4%)
 Frame = -2

Query: 289 APSRASVVG-LGIRPLSMHVFSAW-TLESFASRVVANNGACVAVDAR 155
           APSRAS+V   G +PLSMH+FSAW TLES+ASR+V+NNGAC+ V+++
Sbjct: 166 APSRASIVSHFGNKPLSMHIFSAWSTLESYASRMVSNNGACIVVNSK 212


>ref|XP_013442825.1| NADH-quinone oxidoreductase protein [Medicago truncatula]
 gb|KEH16850.1| NADH-quinone oxidoreductase protein [Medicago truncatula]
          Length = 556

 Score = 59.7 bits (143), Expect(2) = 4e-09
 Identities = 35/77 (45%), Positives = 38/77 (49%)
 Frame = +1

Query: 151 SGGHLLQRKHHCSPPPEKQKIRESRLKIHA*IVV*CQGRRRKLGTEPYEAEVSRTVL*EG 330
           +GGHL QRK HCSPPP+KQKIRES                                    
Sbjct: 294 TGGHLPQRKLHCSPPPDKQKIRES------------------------------------ 317

Query: 331 SGYLLELRPTTTGQLRF 381
           SGYLLELRPTTTG+ RF
Sbjct: 318 SGYLLELRPTTTGKFRF 334



 Score = 28.9 bits (63), Expect(2) = 4e-09
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = +2

Query: 119 PLVRLASERFFRA 157
           PLVRLASERFFRA
Sbjct: 275 PLVRLASERFFRA 287


>gb|OQU84733.1| hypothetical protein SORBI_3004G115100 [Sorghum bicolor]
          Length = 328

 Score = 60.8 bits (146), Expect = 3e-08
 Identities = 25/30 (83%), Positives = 26/30 (86%)
 Frame = -1

Query: 242 YACIFSLDSRIFCFSGGGEQWCLRCSRCPP 153
           YAC+F LDSRIFCFSGGGEQ  LRC RCPP
Sbjct: 234 YACLFRLDSRIFCFSGGGEQCSLRCGRCPP 263


>gb|KVH96778.1| hypothetical protein Ccrd_001132, partial [Cynara cardunculus var.
           scolymus]
          Length = 699

 Score = 60.1 bits (144), Expect = 7e-08
 Identities = 31/40 (77%), Positives = 32/40 (80%)
 Frame = +1

Query: 262 GRRRKLGTEPYEAEVSRTVL*EGSGYLLELRPTTTGQLRF 381
           GRRRKLGTEPY+AEVSR      SGYLLELRP TTGQ RF
Sbjct: 318 GRRRKLGTEPYDAEVSR------SGYLLELRPITTGQFRF 351



 Score = 57.4 bits (137), Expect = 6e-07
 Identities = 32/51 (62%), Positives = 35/51 (68%)
 Frame = +3

Query: 141 SGSFGRASTATQAPLFATTREAKDSRVQAENTCIDSGLMPRPTTEARDGAV 293
           +G + RAS A QA LFATTREAKD RVQAENT IDSG   +  TE  D  V
Sbjct: 282 AGPYERASPARQAALFATTREAKDYRVQAENTYIDSGRRRKLGTEPYDAEV 332