BLASTX nr result
ID: Rehmannia32_contig00021709
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia32_contig00021709
(525 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011081724.1| RNA polymerase sigma factor sigC isoform X2 ... 242 1e-74
ref|XP_020550776.1| RNA polymerase sigma factor sigC isoform X1 ... 242 2e-74
gb|EYU20393.1| hypothetical protein MIMGU_mgv1a018845mg [Erythra... 231 5e-71
gb|PIN16833.1| hypothetical protein CDL12_10487 [Handroanthus im... 228 1e-70
ref|XP_012857954.1| PREDICTED: RNA polymerase sigma factor sigC ... 231 3e-70
ref|XP_022872057.1| RNA polymerase sigma factor sigC [Olea europ... 219 1e-65
gb|KZV42013.1| RNA polymerase sigma factor sigC-like [Dorcoceras... 216 2e-65
gb|PKI68520.1| hypothetical protein CRG98_011069 [Punica granatum] 189 1e-56
ref|XP_002516489.1| PREDICTED: RNA polymerase sigma factor sigC ... 193 9e-56
gb|OMO86642.1| RNA polymerase sigma-70 [Corchorus olitorius] 191 5e-55
gb|OMO66884.1| RNA polymerase sigma-70 [Corchorus capsularis] 189 5e-54
ref|XP_009757464.1| PREDICTED: RNA polymerase sigma factor sigC ... 188 7e-54
ref|XP_017227798.1| PREDICTED: RNA polymerase sigma factor sigC ... 188 9e-54
gb|KJB65617.1| hypothetical protein B456_010G103500 [Gossypium r... 186 1e-53
ref|XP_009757459.1| PREDICTED: RNA polymerase sigma factor sigC ... 188 1e-53
ref|XP_023891394.1| RNA polymerase sigma factor sigC [Quercus su... 188 1e-53
ref|XP_016487978.1| PREDICTED: RNA polymerase sigma factor sigC-... 188 1e-53
ref|XP_009623296.1| PREDICTED: RNA polymerase sigma factor sigC ... 188 1e-53
ref|XP_016683030.1| PREDICTED: RNA polymerase sigma factor sigC-... 186 1e-53
ref|XP_012450467.1| PREDICTED: RNA polymerase sigma factor sigC-... 186 1e-53
>ref|XP_011081724.1| RNA polymerase sigma factor sigC isoform X2 [Sesamum indicum]
Length = 556
Score = 242 bits (618), Expect = 1e-74
Identities = 123/148 (83%), Positives = 133/148 (89%)
Frame = -1
Query: 525 RKTLSTSTGKCPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDT 346
RK LSTS GK PDDS+IAK+TGLS+AKIMSASKCLRVV SIDQKIGE I+ KYMEI PDT
Sbjct: 409 RKALSTSNGKYPDDSDIAKYTGLSIAKIMSASKCLRVVGSIDQKIGEAISAKYMEIAPDT 468
Query: 345 SIMSPEETVIRQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEW 166
SI+SPEETVIRQHMI+DV+ LLNGLEPREKQV+ILRFGLGN Q KSLEEIGR+F VSKEW
Sbjct: 469 SILSPEETVIRQHMINDVHRLLNGLEPREKQVLILRFGLGNRQCKSLEEIGRLFCVSKEW 528
Query: 165 IRKIERTALTKLRDEDCLKILGHYVYMQ 82
IRKIER AL KLR+ED LKIL HYVYMQ
Sbjct: 529 IRKIERAALAKLRNEDSLKILSHYVYMQ 556
>ref|XP_020550776.1| RNA polymerase sigma factor sigC isoform X1 [Sesamum indicum]
Length = 578
Score = 242 bits (618), Expect = 2e-74
Identities = 123/148 (83%), Positives = 133/148 (89%)
Frame = -1
Query: 525 RKTLSTSTGKCPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDT 346
RK LSTS GK PDDS+IAK+TGLS+AKIMSASKCLRVV SIDQKIGE I+ KYMEI PDT
Sbjct: 431 RKALSTSNGKYPDDSDIAKYTGLSIAKIMSASKCLRVVGSIDQKIGEAISAKYMEIAPDT 490
Query: 345 SIMSPEETVIRQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEW 166
SI+SPEETVIRQHMI+DV+ LLNGLEPREKQV+ILRFGLGN Q KSLEEIGR+F VSKEW
Sbjct: 491 SILSPEETVIRQHMINDVHRLLNGLEPREKQVLILRFGLGNRQCKSLEEIGRLFCVSKEW 550
Query: 165 IRKIERTALTKLRDEDCLKILGHYVYMQ 82
IRKIER AL KLR+ED LKIL HYVYMQ
Sbjct: 551 IRKIERAALAKLRNEDSLKILSHYVYMQ 578
>gb|EYU20393.1| hypothetical protein MIMGU_mgv1a018845mg [Erythranthe guttata]
Length = 478
Score = 231 bits (589), Expect = 5e-71
Identities = 120/148 (81%), Positives = 130/148 (87%)
Frame = -1
Query: 525 RKTLSTSTGKCPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDT 346
RK L+TS GK PDD EIAKFTGLSVAK+MSASKCLRVV SIDQKIGE + KYMEI DT
Sbjct: 331 RKALTTSNGKYPDDYEIAKFTGLSVAKVMSASKCLRVVGSIDQKIGEYMTTKYMEILSDT 390
Query: 345 SIMSPEETVIRQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEW 166
S+ SPEE VIRQHM++DV TLLNGLEPREKQVIILRFGLGN Q KSLEEIGR+FRVSKEW
Sbjct: 391 SMPSPEEAVIRQHMLNDVSTLLNGLEPREKQVIILRFGLGNCQCKSLEEIGRLFRVSKEW 450
Query: 165 IRKIERTALTKLRDEDCLKILGHYVYMQ 82
IRKIER+AL KLR+ED LKIL HYV+MQ
Sbjct: 451 IRKIERSALIKLRNEDSLKILNHYVHMQ 478
>gb|PIN16833.1| hypothetical protein CDL12_10487 [Handroanthus impetiginosus]
Length = 393
Score = 228 bits (580), Expect = 1e-70
Identities = 115/148 (77%), Positives = 129/148 (87%)
Frame = -1
Query: 525 RKTLSTSTGKCPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDT 346
RK LSTS GK PDD EIAKFTGLS+AKIMSASKCLRVV SIDQKIG+ I+ KY EI PDT
Sbjct: 246 RKALSTSNGKYPDDCEIAKFTGLSIAKIMSASKCLRVVGSIDQKIGDSISTKYTEIIPDT 305
Query: 345 SIMSPEETVIRQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEW 166
SI++PEETV RQHM +D+Y LLN LEPREKQV+ILR+GLGN+Q KSL+EIGR+ VSKEW
Sbjct: 306 SILTPEETVFRQHMRNDIYMLLNTLEPREKQVLILRYGLGNHQCKSLDEIGRLLCVSKEW 365
Query: 165 IRKIERTALTKLRDEDCLKILGHYVYMQ 82
IRKIER ALTKLR+E+ LKIL HYVYMQ
Sbjct: 366 IRKIERAALTKLRNENSLKILNHYVYMQ 393
>ref|XP_012857954.1| PREDICTED: RNA polymerase sigma factor sigC [Erythranthe guttata]
Length = 562
Score = 231 bits (589), Expect = 3e-70
Identities = 120/148 (81%), Positives = 130/148 (87%)
Frame = -1
Query: 525 RKTLSTSTGKCPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDT 346
RK L+TS GK PDD EIAKFTGLSVAK+MSASKCLRVV SIDQKIGE + KYMEI DT
Sbjct: 415 RKALTTSNGKYPDDYEIAKFTGLSVAKVMSASKCLRVVGSIDQKIGEYMTTKYMEILSDT 474
Query: 345 SIMSPEETVIRQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEW 166
S+ SPEE VIRQHM++DV TLLNGLEPREKQVIILRFGLGN Q KSLEEIGR+FRVSKEW
Sbjct: 475 SMPSPEEAVIRQHMLNDVSTLLNGLEPREKQVIILRFGLGNCQCKSLEEIGRLFRVSKEW 534
Query: 165 IRKIERTALTKLRDEDCLKILGHYVYMQ 82
IRKIER+AL KLR+ED LKIL HYV+MQ
Sbjct: 535 IRKIERSALIKLRNEDSLKILNHYVHMQ 562
>ref|XP_022872057.1| RNA polymerase sigma factor sigC [Olea europaea var. sylvestris]
Length = 558
Score = 219 bits (558), Expect = 1e-65
Identities = 113/148 (76%), Positives = 130/148 (87%), Gaps = 1/148 (0%)
Frame = -1
Query: 525 RKTLSTSTGKCPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDT 346
RK+L +S GK PDD+EIAKFTGLS+AKI SASKCLRVV SIDQK+GEGI+ KY+E+ PDT
Sbjct: 411 RKSLRSSHGKHPDDTEIAKFTGLSIAKITSASKCLRVVGSIDQKLGEGISAKYLEVMPDT 470
Query: 345 SIMSPEETVIRQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEW 166
SIMSPEETV+RQ MI VYTLLNGLE RE+QV+ILRFG+GN QRKSLEEIGR+F VSKEW
Sbjct: 471 SIMSPEETVMRQQMIEGVYTLLNGLETRERQVVILRFGVGNYQRKSLEEIGRLFCVSKEW 530
Query: 165 IRKIERTALTKLR-DEDCLKILGHYVYM 85
IRKIERTALTKLR + + L+ L HY+YM
Sbjct: 531 IRKIERTALTKLRKNGNSLQNLSHYLYM 558
>gb|KZV42013.1| RNA polymerase sigma factor sigC-like [Dorcoceras hygrometricum]
Length = 464
Score = 216 bits (551), Expect = 2e-65
Identities = 110/148 (74%), Positives = 125/148 (84%)
Frame = -1
Query: 525 RKTLSTSTGKCPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDT 346
RK LS S G PDD EIAKFTGLS+AKI SAS+CLRVV SIDQK G+GI+IKYME+T DT
Sbjct: 317 RKYLSISNGNHPDDQEIAKFTGLSLAKIKSASECLRVVGSIDQKFGDGISIKYMEVTVDT 376
Query: 345 SIMSPEETVIRQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEW 166
SI +PEE V RQHM+ D+YTLLNGLEPRE QV++LRFGL N+Q+KSLEEIG +F VSKEW
Sbjct: 377 SIANPEEAVTRQHMVKDLYTLLNGLEPREIQVLMLRFGLKNSQQKSLEEIGVLFGVSKEW 436
Query: 165 IRKIERTALTKLRDEDCLKILGHYVYMQ 82
IRKIE+ ALTKLR+EDC KIL HY MQ
Sbjct: 437 IRKIEKGALTKLRNEDCHKILSHYARMQ 464
>gb|PKI68520.1| hypothetical protein CRG98_011069 [Punica granatum]
Length = 290
Score = 189 bits (479), Expect = 1e-56
Identities = 93/145 (64%), Positives = 120/145 (82%)
Frame = -1
Query: 525 RKTLSTSTGKCPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDT 346
RK+L+ GK PDD EIAKF+GLSVAKI SASKCLRVV SI+QK+G+ I+ KYME+ PD
Sbjct: 144 RKSLNYHNGKYPDDEEIAKFSGLSVAKIKSASKCLRVVGSINQKVGDCISAKYMELAPDL 203
Query: 345 SIMSPEETVIRQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEW 166
+I SPE+TV+RQH+ ++Y LLNGL+ REKQV++LR+GL +++ +SLEEIGR+FRVSKEW
Sbjct: 204 AIKSPEKTVMRQHLRSEIYELLNGLDVREKQVLMLRYGLRDHRPRSLEEIGRIFRVSKEW 263
Query: 165 IRKIERTALTKLRDEDCLKILGHYV 91
IRKIE+ AL KLRD + + L HY+
Sbjct: 264 IRKIEKKALKKLRDLETCQSLSHYL 288
>ref|XP_002516489.1| PREDICTED: RNA polymerase sigma factor sigC [Ricinus communis]
gb|EEF45830.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
Length = 560
Score = 193 bits (491), Expect = 9e-56
Identities = 93/145 (64%), Positives = 117/145 (80%)
Frame = -1
Query: 525 RKTLSTSTGKCPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDT 346
RK L+TS GK PDD EIAK+TGLS+AKI SAS+CLRVV SIDQKIGE +N KY+E PDT
Sbjct: 414 RKALTTSNGKYPDDDEIAKYTGLSLAKIESASRCLRVVGSIDQKIGESLNAKYLEFLPDT 473
Query: 345 SIMSPEETVIRQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEW 166
S+ SPEE V+RQHMI D++ LL L+ RE+QV+ILRFGL + Q KSLEEIGR F VSKEW
Sbjct: 474 SVQSPEEVVMRQHMIQDMHNLLRSLDSRERQVLILRFGLNDYQPKSLEEIGRHFHVSKEW 533
Query: 165 IRKIERTALTKLRDEDCLKILGHYV 91
+R++E+ +T+LR+E+ + L HY+
Sbjct: 534 VRRLEKRVMTRLRNEETCRNLRHYI 558
>gb|OMO86642.1| RNA polymerase sigma-70 [Corchorus olitorius]
Length = 555
Score = 191 bits (486), Expect = 5e-55
Identities = 93/145 (64%), Positives = 118/145 (81%)
Frame = -1
Query: 525 RKTLSTSTGKCPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDT 346
RK LS S GK PD+ EIAKFTGLS+AKI SA+KC+R+V SIDQKIG+ +N KY+E PD
Sbjct: 409 RKALSQSHGKNPDEDEIAKFTGLSLAKIRSANKCMRIVGSIDQKIGDCMNAKYLEFIPDL 468
Query: 345 SIMSPEETVIRQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEW 166
SI SPE+TV+RQHM D+Y LLNGL+ RE+QV++LRFGL + +SLEEIGRVFRVSKEW
Sbjct: 469 SIRSPEKTVMRQHMEKDIYDLLNGLDARERQVMVLRFGLKGSPPRSLEEIGRVFRVSKEW 528
Query: 165 IRKIERTALTKLRDEDCLKILGHYV 91
IR++E+ A+TK+RD + + L HY+
Sbjct: 529 IRRLEKKAMTKMRDTETCRNLSHYL 553
>gb|OMO66884.1| RNA polymerase sigma-70 [Corchorus capsularis]
Length = 555
Score = 189 bits (479), Expect = 5e-54
Identities = 92/145 (63%), Positives = 117/145 (80%)
Frame = -1
Query: 525 RKTLSTSTGKCPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDT 346
+K LS S GK PD+ EIAKFTGLS+AKI SA+KC+R+V SIDQKIG+ +N KY+E PD
Sbjct: 409 QKALSQSHGKNPDEDEIAKFTGLSLAKIRSANKCMRIVGSIDQKIGDCMNAKYLEFIPDL 468
Query: 345 SIMSPEETVIRQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEW 166
SI SPE+TV+RQHM D+Y LLNGL+ RE+QV++LRFGL + +SLEEIGR+F VSKEW
Sbjct: 469 SIRSPEKTVMRQHMEKDIYDLLNGLDARERQVMVLRFGLKGSPPRSLEEIGRLFHVSKEW 528
Query: 165 IRKIERTALTKLRDEDCLKILGHYV 91
IR+IER A+TK+RD + + L HY+
Sbjct: 529 IRRIERKAMTKMRDTETCRNLSHYL 553
>ref|XP_009757464.1| PREDICTED: RNA polymerase sigma factor sigC isoform X2 [Nicotiana
sylvestris]
ref|XP_016482950.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X2
[Nicotiana tabacum]
Length = 554
Score = 188 bits (478), Expect = 7e-54
Identities = 95/144 (65%), Positives = 115/144 (79%)
Frame = -1
Query: 525 RKTLSTSTGKCPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDT 346
RK LS S GK P D+EIAK+TGLS A+I ASKCLRVV SIDQK+G I+ K +E+TPD
Sbjct: 409 RKALSRSHGKFPGDNEIAKYTGLSTARIAMASKCLRVVGSIDQKVGHCISAKVLELTPDK 468
Query: 345 SIMSPEETVIRQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEW 166
SI+SPEETVIR+ +I ++Y LL L+P+E+QVI RFGL N+QRKSLEEIGR++ VSKEW
Sbjct: 469 SIVSPEETVIREDIIDNMYALLESLDPKEQQVIYFRFGLENHQRKSLEEIGRLYGVSKEW 528
Query: 165 IRKIERTALTKLRDEDCLKILGHY 94
IR+IER ALTKLR DC + L HY
Sbjct: 529 IRRIERRALTKLRSADCFQDLTHY 552
>ref|XP_017227798.1| PREDICTED: RNA polymerase sigma factor sigC [Daucus carota subsp.
sativus]
gb|KZN11801.1| hypothetical protein DCAR_004457 [Daucus carota subsp. sativus]
Length = 553
Score = 188 bits (477), Expect = 9e-54
Identities = 92/147 (62%), Positives = 118/147 (80%)
Frame = -1
Query: 525 RKTLSTSTGKCPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDT 346
RKTLS S G PDD+EIA+ TGLS++KI +AS CLRVV S+DQ+IG+ ++KY+E+ PDT
Sbjct: 402 RKTLSNSLGTYPDDNEIAESTGLSLSKIAAASNCLRVVGSLDQRIGDFTSVKYLELMPDT 461
Query: 345 SIMSPEETVIRQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEW 166
SI PEETV+R+HM+ D+Y LL L+PRE+QV++LR GL + SL+EIGR+F VSKEW
Sbjct: 462 SIKGPEETVMREHMLKDMYDLLAELDPRERQVLLLRLGLQGHHCMSLQEIGRLFSVSKEW 521
Query: 165 IRKIERTALTKLRDEDCLKILGHYVYM 85
IRKIERTAL KLRD++ L L HY+YM
Sbjct: 522 IRKIERTALRKLRDQETLHSLSHYLYM 548
>gb|KJB65617.1| hypothetical protein B456_010G103500 [Gossypium raimondii]
Length = 458
Score = 186 bits (471), Expect = 1e-53
Identities = 92/145 (63%), Positives = 115/145 (79%)
Frame = -1
Query: 525 RKTLSTSTGKCPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDT 346
RK LS S GK P++ EIAK TGLS++KI SA+KC RVV SIDQKIG+ IN KY+E PD
Sbjct: 312 RKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFRVVGSIDQKIGDCINAKYLEFIPDA 371
Query: 345 SIMSPEETVIRQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEW 166
SI SPE+TV+RQHM D++ LLNGLE RE+QV++LR+GL + KSLEEIGR+FRVSKEW
Sbjct: 372 SICSPEKTVMRQHMKEDIHDLLNGLEKRERQVMVLRYGLTGSPPKSLEEIGRLFRVSKEW 431
Query: 165 IRKIERTALTKLRDEDCLKILGHYV 91
IR+IE A+ KLRD++ + L HY+
Sbjct: 432 IRRIEMKAMAKLRDKETCRNLSHYL 456
>ref|XP_009757459.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Nicotiana
sylvestris]
ref|XP_016482949.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X1
[Nicotiana tabacum]
Length = 584
Score = 188 bits (478), Expect = 1e-53
Identities = 95/144 (65%), Positives = 115/144 (79%)
Frame = -1
Query: 525 RKTLSTSTGKCPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDT 346
RK LS S GK P D+EIAK+TGLS A+I ASKCLRVV SIDQK+G I+ K +E+TPD
Sbjct: 439 RKALSRSHGKFPGDNEIAKYTGLSTARIAMASKCLRVVGSIDQKVGHCISAKVLELTPDK 498
Query: 345 SIMSPEETVIRQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEW 166
SI+SPEETVIR+ +I ++Y LL L+P+E+QVI RFGL N+QRKSLEEIGR++ VSKEW
Sbjct: 499 SIVSPEETVIREDIIDNMYALLESLDPKEQQVIYFRFGLENHQRKSLEEIGRLYGVSKEW 558
Query: 165 IRKIERTALTKLRDEDCLKILGHY 94
IR+IER ALTKLR DC + L HY
Sbjct: 559 IRRIERRALTKLRSADCFQDLTHY 582
>ref|XP_023891394.1| RNA polymerase sigma factor sigC [Quercus suber]
gb|POE61975.1| rna polymerase sigma factor sigc [Quercus suber]
Length = 572
Score = 188 bits (477), Expect = 1e-53
Identities = 95/145 (65%), Positives = 114/145 (78%)
Frame = -1
Query: 525 RKTLSTSTGKCPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDT 346
+ L++ K PDD EIAK TGLS+AKI SASKCLRVV SIDQK+G INIKYME+TPD
Sbjct: 426 KTALNSGHKKYPDDDEIAKHTGLSLAKIRSASKCLRVVGSIDQKMGHCINIKYMEVTPDM 485
Query: 345 SIMSPEETVIRQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEW 166
S+ SPEETV+RQHMI D+ LL GL+ RE+Q + LRFGL +NQ KSLEE GR+ V+KEW
Sbjct: 486 SVKSPEETVMRQHMIKDIRDLLRGLDSRERQALFLRFGLQDNQPKSLEESGRLLCVTKEW 545
Query: 165 IRKIERTALTKLRDEDCLKILGHYV 91
+RKIE+ ALTKLRDED + L HY+
Sbjct: 546 MRKIEKKALTKLRDEDICRNLSHYL 570
>ref|XP_016487978.1| PREDICTED: RNA polymerase sigma factor sigC-like [Nicotiana
tabacum]
Length = 572
Score = 188 bits (477), Expect = 1e-53
Identities = 94/144 (65%), Positives = 115/144 (79%)
Frame = -1
Query: 525 RKTLSTSTGKCPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDT 346
RK LS S GK P D EIAK+TGLS A+I ASKCLRVV SIDQK+G+ I+ K ME+TPD
Sbjct: 427 RKALSRSHGKFPGDDEIAKYTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVMELTPDK 486
Query: 345 SIMSPEETVIRQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEW 166
SI+SPEETVIR+ +I ++Y LL L+P+E+QV+ RFGL N+QRKSLEEIGR++ VSKEW
Sbjct: 487 SIISPEETVIREDIIDNMYALLESLDPKEQQVVYFRFGLENHQRKSLEEIGRLYGVSKEW 546
Query: 165 IRKIERTALTKLRDEDCLKILGHY 94
IR+IER AL+KLR DC + L HY
Sbjct: 547 IRRIERRALSKLRSADCFQDLTHY 570
>ref|XP_009623296.1| PREDICTED: RNA polymerase sigma factor sigC [Nicotiana
tomentosiformis]
Length = 572
Score = 188 bits (477), Expect = 1e-53
Identities = 94/144 (65%), Positives = 115/144 (79%)
Frame = -1
Query: 525 RKTLSTSTGKCPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDT 346
RK LS S GK P D EIAK+TGLS A+I ASKCLRVV SIDQK+G+ I+ K ME+TPD
Sbjct: 427 RKALSRSHGKFPGDDEIAKYTGLSTARIAMASKCLRVVGSIDQKVGDCISAKVMELTPDK 486
Query: 345 SIMSPEETVIRQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEW 166
SI+SPEETVIR+ +I ++Y LL L+P+E+QV+ RFGL N+QRKSLEEIGR++ VSKEW
Sbjct: 487 SIISPEETVIREDIIDNMYALLESLDPKEQQVVYFRFGLENHQRKSLEEIGRLYGVSKEW 546
Query: 165 IRKIERTALTKLRDEDCLKILGHY 94
IR+IER AL+KLR DC + L HY
Sbjct: 547 IRRIERRALSKLRSADCFQDLTHY 570
>ref|XP_016683030.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X3
[Gossypium hirsutum]
Length = 471
Score = 186 bits (471), Expect = 1e-53
Identities = 92/145 (63%), Positives = 115/145 (79%)
Frame = -1
Query: 525 RKTLSTSTGKCPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDT 346
RK LS S GK P++ EIAK TGLS++KI SA+KC RVV SIDQKIG+ IN KY+E PD
Sbjct: 325 RKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFRVVGSIDQKIGDCINAKYLEFIPDA 384
Query: 345 SIMSPEETVIRQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEW 166
SI SPE+TV+RQHM D++ LLNGLE RE+QV++LR+GL + KSLEEIGR+FRVSKEW
Sbjct: 385 SICSPEKTVMRQHMKEDIHDLLNGLEKRERQVMVLRYGLTGSPPKSLEEIGRLFRVSKEW 444
Query: 165 IRKIERTALTKLRDEDCLKILGHYV 91
IR+IE A+ KLRD++ + L HY+
Sbjct: 445 IRRIEMKAMAKLRDKETCRNLSHYL 469
>ref|XP_012450467.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X6
[Gossypium raimondii]
Length = 471
Score = 186 bits (471), Expect = 1e-53
Identities = 92/145 (63%), Positives = 115/145 (79%)
Frame = -1
Query: 525 RKTLSTSTGKCPDDSEIAKFTGLSVAKIMSASKCLRVVRSIDQKIGEGINIKYMEITPDT 346
RK LS S GK P++ EIAK TGLS++KI SA+KC RVV SIDQKIG+ IN KY+E PD
Sbjct: 325 RKALSKSHGKYPEEDEIAKITGLSLSKIRSANKCFRVVGSIDQKIGDCINAKYLEFIPDA 384
Query: 345 SIMSPEETVIRQHMIHDVYTLLNGLEPREKQVIILRFGLGNNQRKSLEEIGRVFRVSKEW 166
SI SPE+TV+RQHM D++ LLNGLE RE+QV++LR+GL + KSLEEIGR+FRVSKEW
Sbjct: 385 SICSPEKTVMRQHMKEDIHDLLNGLEKRERQVMVLRYGLTGSPPKSLEEIGRLFRVSKEW 444
Query: 165 IRKIERTALTKLRDEDCLKILGHYV 91
IR+IE A+ KLRD++ + L HY+
Sbjct: 445 IRRIEMKAMAKLRDKETCRNLSHYL 469