BLASTX nr result
ID: Rehmannia32_contig00020178
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia32_contig00020178
(494 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAX03478.1| RNA-dependent RNA polymerase [Plantago asiatica ... 59 4e-07
dbj|BAX03473.1| RNA-dependent RNA polymerase [Plantago asiatica ... 59 4e-07
gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago a... 57 2e-06
gb|AAX19931.1| viral replicase [Nandina mosaic virus] 57 2e-06
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ... 57 2e-06
gb|ANY93292.1| RdRp [Plantago asiatica mosaic virus] 57 2e-06
gb|AMY62723.1| RNA-dependent RNA polymerase [Plantago asiatica m... 57 2e-06
gb|AMY62713.1| RNA-dependent RNA polymerase [Plantago asiatica m... 57 2e-06
gb|AMY62703.1| RNA-dependent RNA polymerase [Plantago asiatica m... 57 2e-06
gb|AMD78101.1| RdRP [Plantago asiatica mosaic virus] 57 2e-06
emb|CEN56830.1| RNA-dependent RNA polymerase [Plantago asiatica ... 57 2e-06
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] >gi|... 57 2e-06
gb|AMN10083.1| RNA-dependent RNA polymerase [Plantago asiatica m... 57 2e-06
gb|AVL84357.1| RNA-dependent RNA polymerase [Plantago asiatica m... 57 2e-06
ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X] >g... 56 6e-06
gb|AMY62718.1| RNA-dependent RNA polymerase [Plantago asiatica m... 55 8e-06
>dbj|BAX03478.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1387
Score = 59.3 bits (142), Expect = 4e-07
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = +3
Query: 381 QDTKAPRQAHLHQVTVRDLVKFGGSPFLHSD 473
QD +PRQAHLHQVTVRDLVKFGGSPFL+SD
Sbjct: 1357 QDLLSPRQAHLHQVTVRDLVKFGGSPFLNSD 1387
>dbj|BAX03473.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1387
Score = 59.3 bits (142), Expect = 4e-07
Identities = 27/31 (87%), Positives = 29/31 (93%)
Frame = +3
Query: 381 QDTKAPRQAHLHQVTVRDLVKFGGSPFLHSD 473
QD +PRQAHLHQVTVRDLVKFGGSPFL+SD
Sbjct: 1357 QDLLSPRQAHLHQVTVRDLVKFGGSPFLNSD 1387
>gb|AGW45386.1| RNA-dependent RNA polymerase, partial [Plantago asiatica mosaic
virus]
Length = 711
Score = 57.4 bits (137), Expect = 2e-06
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = +3
Query: 381 QDTKAPRQAHLHQVTVRDLVKFGGSPFLHSD 473
QD +P QAHLHQVTVRDLVKFGGSPFL+SD
Sbjct: 681 QDLLSPHQAHLHQVTVRDLVKFGGSPFLNSD 711
>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
Length = 1368
Score = 57.4 bits (137), Expect = 2e-06
Identities = 26/30 (86%), Positives = 28/30 (93%)
Frame = +3
Query: 384 DTKAPRQAHLHQVTVRDLVKFGGSPFLHSD 473
D +PRQAHLHQVTVRDLVKFGGSPFL+SD
Sbjct: 1339 DLLSPRQAHLHQVTVRDLVKFGGSPFLNSD 1368
>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 57.4 bits (137), Expect = 2e-06
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = +3
Query: 381 QDTKAPRQAHLHQVTVRDLVKFGGSPFLHSD 473
QD +P QAHLHQVTVRDLVKFGGSPFL+SD
Sbjct: 1350 QDLLSPHQAHLHQVTVRDLVKFGGSPFLNSD 1380
>gb|ANY93292.1| RdRp [Plantago asiatica mosaic virus]
Length = 1380
Score = 57.4 bits (137), Expect = 2e-06
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = +3
Query: 381 QDTKAPRQAHLHQVTVRDLVKFGGSPFLHSD 473
QD +P QAHLHQVTVRDLVKFGGSPFL+SD
Sbjct: 1350 QDLLSPHQAHLHQVTVRDLVKFGGSPFLNSD 1380
>gb|AMY62723.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 57.4 bits (137), Expect = 2e-06
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = +3
Query: 381 QDTKAPRQAHLHQVTVRDLVKFGGSPFLHSD 473
QD +P QAHLHQVTVRDLVKFGGSPFL+SD
Sbjct: 1350 QDLLSPHQAHLHQVTVRDLVKFGGSPFLNSD 1380
>gb|AMY62713.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 57.4 bits (137), Expect = 2e-06
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = +3
Query: 381 QDTKAPRQAHLHQVTVRDLVKFGGSPFLHSD 473
QD +P QAHLHQVTVRDLVKFGGSPFL+SD
Sbjct: 1350 QDLLSPHQAHLHQVTVRDLVKFGGSPFLNSD 1380
>gb|AMY62703.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
gb|AMY62708.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 57.4 bits (137), Expect = 2e-06
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = +3
Query: 381 QDTKAPRQAHLHQVTVRDLVKFGGSPFLHSD 473
QD +P QAHLHQVTVRDLVKFGGSPFL+SD
Sbjct: 1350 QDLLSPHQAHLHQVTVRDLVKFGGSPFLNSD 1380
>gb|AMD78101.1| RdRP [Plantago asiatica mosaic virus]
Length = 1380
Score = 57.4 bits (137), Expect = 2e-06
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = +3
Query: 381 QDTKAPRQAHLHQVTVRDLVKFGGSPFLHSD 473
QD +P QAHLHQVTVRDLVKFGGSPFL+SD
Sbjct: 1350 QDLLSPHQAHLHQVTVRDLVKFGGSPFLNSD 1380
>emb|CEN56830.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 57.4 bits (137), Expect = 2e-06
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = +3
Query: 381 QDTKAPRQAHLHQVTVRDLVKFGGSPFLHSD 473
QD +P QAHLHQVTVRDLVKFGGSPFL+SD
Sbjct: 1350 QDLLSPHQAHLHQVTVRDLVKFGGSPFLNSD 1380
>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA replication protein; AltName: Full=156 kDa protein;
AltName: Full=ORF1 protein; Includes: RecName:
Full=RNA-directed RNA polymerase; Includes: RecName:
Full=Helicase
emb|CAA79761.1| 156K-protein [Plantago asiatica mosaic virus]
Length = 1385
Score = 57.4 bits (137), Expect = 2e-06
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = +3
Query: 381 QDTKAPRQAHLHQVTVRDLVKFGGSPFLHSD 473
QD +P QAHLHQVTVRDLVKFGGSPFL+SD
Sbjct: 1355 QDLLSPHQAHLHQVTVRDLVKFGGSPFLNSD 1385
>gb|AMN10083.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1387
Score = 57.4 bits (137), Expect = 2e-06
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = +3
Query: 381 QDTKAPRQAHLHQVTVRDLVKFGGSPFLHSD 473
QD +P QAHLHQVTVRDLVKFGGSPFL+SD
Sbjct: 1357 QDLLSPHQAHLHQVTVRDLVKFGGSPFLNSD 1387
>gb|AVL84357.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1388
Score = 57.4 bits (137), Expect = 2e-06
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = +3
Query: 381 QDTKAPRQAHLHQVTVRDLVKFGGSPFLHSD 473
QD +P QAHLHQVTVRDLVKFGGSPFL+SD
Sbjct: 1358 QDLLSPHQAHLHQVTVRDLVKFGGSPFLNSD 1388
>ref|NP_702988.1| RNA-dependent RNA polymerase [Tulip virus X]
dbj|BAC16785.1| RNA-dependent RNA polymerase [Tulip virus X]
Length = 1361
Score = 55.8 bits (133), Expect = 6e-06
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +3
Query: 381 QDTKAPRQAHLHQVTVRDLVKFGGSPFLHSD 473
QD +P QAHLHQVTVRDL KFGGSPFL+SD
Sbjct: 1331 QDLLSPEQAHLHQVTVRDLTKFGGSPFLNSD 1361
>gb|AMY62718.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
Length = 1380
Score = 55.5 bits (132), Expect = 8e-06
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +3
Query: 381 QDTKAPRQAHLHQVTVRDLVKFGGSPFLHSD 473
QD +P Q HLHQVTVRDLVKFGGSPFL+SD
Sbjct: 1350 QDLLSPHQXHLHQVTVRDLVKFGGSPFLNSD 1380