BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00017608
         (688 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_015889220.1| PREDICTED: uncharacterized protein LOC107424...   203   3e-56
gb|KZV44983.1| hypothetical protein F511_32729 [Dorcoceras hygro...   188   1e-54
gb|PNX76291.1| gag/pol polyprotein - maize retrotransposon Hopsc...   193   2e-53
gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposo...   194   2e-53
dbj|GAU19483.1| hypothetical protein TSUD_77270 [Trifolium subte...   194   4e-53
gb|PNY01489.1| copia-like polyprotein, partial [Trifolium pratense]   192   8e-53
gb|PNY02796.1| copia protein (gag-int-pol protein), partial [Tri...   192   1e-52
gb|PNX78574.1| retrovirus-related Pol polyprotein from transposo...   188   4e-52
gb|KYP61012.1| Retrovirus-related Pol polyprotein from transposo...   180   8e-52
gb|PNX94503.1| putative retrotransposon Ty1-copia subclass prote...   188   3e-51
gb|PKA49422.1| Retrovirus-related Pol polyprotein from transposo...   182   4e-51
gb|PKA60107.1| Retrovirus-related Pol polyprotein from transposo...   186   4e-51
gb|KYP31892.1| Retrovirus-related Pol polyprotein from transposo...   175   7e-51
ref|XP_015386863.1| PREDICTED: uncharacterized protein LOC107177...   187   1e-50
dbj|GAU51268.1| hypothetical protein TSUD_412550 [Trifolium subt...   187   1e-50
emb|CAN74951.1| hypothetical protein VITISV_030567, partial [Vit...   187   1e-50
gb|KYP36077.1| Retrovirus-related Pol polyprotein from transposo...   178   1e-50
gb|KYP41416.1| Retrovirus-related Pol polyprotein from transposo...   172   2e-50
gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposo...   186   2e-50
gb|KHN22040.1| Retrovirus-related Pol polyprotein from transposo...   186   2e-50

>ref|XP_015889220.1| PREDICTED: uncharacterized protein LOC107424043 [Ziziphus jujuba]
          Length = 1270

 Score =  203 bits (516), Expect = 3e-56
 Identities = 93/172 (54%), Positives = 122/172 (70%), Gaps = 8/172 (4%)
 Frame = -1

Query: 493  HMRLGHPNNNVMRHMLS--------NKELLSTAPSFCNACRIGKSKHKHYSSSFTVTTKP 338
            H RLGH +  V+  +LS        NK L     +FC AC++GK+   H+S S +  + P
Sbjct: 636  HQRLGHASEAVINKVLSLYKPDLHINKSL-----AFCEACQLGKNHLCHFSLSNSKASAP 690

Query: 337  LEIIHSDVWGPAPILSKDGFRYYVHFVDDYTNFTWIYPLKLKSEVKDIFLHFQNLVERKF 158
            LE++H+DVWGPA  +SK+G+RYY+HF+DDY+ FTWIYP+ +KSE   IF HF  +VER F
Sbjct: 691  LELVHTDVWGPAATVSKEGYRYYIHFIDDYSRFTWIYPMTVKSEALFIFKHFHVMVERLF 750

Query: 157  ETKIKTLQSDWGGEYRSLAPILQTLGIHFRHPCPHTHPQNGKSERKHRHIVE 2
            +TK+K +QSDWGGEYR   P LQ +GI FRH CP+ H QNG++ERKHRHIVE
Sbjct: 751  DTKLKVVQSDWGGEYRCFLPYLQQVGIKFRHSCPYMHQQNGRAERKHRHIVE 802


>gb|KZV44983.1| hypothetical protein F511_32729 [Dorcoceras hygrometricum]
          Length = 372

 Score =  188 bits (478), Expect = 1e-54
 Identities = 103/235 (43%), Positives = 141/235 (60%), Gaps = 6/235 (2%)
 Frame = -1

Query: 688 VKEQTSKRELLRGVLSEGLYRLQLH---QTPTTSPATSHPMLSCVSKRPAHFQXXXXXXX 518
           VK+  ++  LL+G L +GLY+  L    Q P +     H  +S +S +P           
Sbjct: 62  VKDLATRVTLLKGSLHKGLYKFDLGKHLQVPDSPAKCLH--ISSISPKPLK--------- 110

Query: 517 XXXXXXLWHMRLGHPNNNVMRHMLSNKELLSTAP---SFCNACRIGKSKHKHYSSSFTVT 347
                 LWH RLGHP  +V++ +    +  ++     +FC AC +GKS    +S S +  
Sbjct: 111 -ESSLNLWHFRLGHPTISVVKQVFKLCKFSASKNEYFNFCTACELGKSHRLPFSLSQSCV 169

Query: 346 TKPLEIIHSDVWGPAPILSKDGFRYYVHFVDDYTNFTWIYPLKLKSEVKDIFLHFQNLVE 167
           ++PLE+I+SDVWGP+  +S+DGFRYYV FVD ++ +TWIY  KLK EV  IF  F++LVE
Sbjct: 170 SEPLELIYSDVWGPSHTVSRDGFRYYVSFVDAFSRYTWIYFTKLKFEVPRIFETFKSLVE 229

Query: 166 RKFETKIKTLQSDWGGEYRSLAPILQTLGIHFRHPCPHTHPQNGKSERKHRHIVE 2
            +F  +IK LQ+DWGGE+RSL   LQ  GI  R  CPHT  QNG  ERKHRH+VE
Sbjct: 230 LQFNKRIKNLQTDWGGEFRSLTSFLQEHGIQHRVTCPHTSEQNGVVERKHRHVVE 284


>gb|PNX76291.1| gag/pol polyprotein - maize retrotransposon Hopscotch, partial
            [Trifolium pratense]
          Length = 835

 Score =  193 bits (491), Expect = 2e-53
 Identities = 100/232 (43%), Positives = 136/232 (58%), Gaps = 3/232 (1%)
 Frame = -1

Query: 688  VKEQTSKRELLRGVLSEGLYRLQLHQTPTTSPATSHPMLSCVSKRPAHFQXXXXXXXXXX 509
            VK++ + + +LRG+L +GLY+L        S   S   +S                    
Sbjct: 407  VKDKLTGKAILRGILKDGLYQL--------SEKDSSAYVSIKES---------------- 442

Query: 508  XXXLWHMRLGHPNNNVMRHMLSN---KELLSTAPSFCNACRIGKSKHKHYSSSFTVTTKP 338
                WH +LGHPNN V+  +L +   K   S   SFC AC+ GK     + +SF+   + 
Sbjct: 443  ----WHRKLGHPNNKVLDIVLKSCNVKLSPSDQFSFCEACQYGKMHFLPFKTSFSHAKEI 498

Query: 337  LEIIHSDVWGPAPILSKDGFRYYVHFVDDYTNFTWIYPLKLKSEVKDIFLHFQNLVERKF 158
            LE++H+DVWGPAPI+S  GF+YYVHF+DD+T FTWIYPLK KS+    F+ F+N+VE +F
Sbjct: 499  LELVHTDVWGPAPIISSSGFKYYVHFIDDFTRFTWIYPLKQKSDTAHAFIQFKNMVENQF 558

Query: 157  ETKIKTLQSDWGGEYRSLAPILQTLGIHFRHPCPHTHPQNGKSERKHRHIVE 2
              KIKT+Q D GGEY+ +       GI FR  CP+T  QNG++ERKHRHI E
Sbjct: 559  SKKIKTIQCDGGGEYKPVQKHAIEAGIQFRMSCPYTSQQNGRAERKHRHIAE 610


>gb|KYP50444.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1165

 Score =  194 bits (494), Expect = 2e-53
 Identities = 99/232 (42%), Positives = 141/232 (60%), Gaps = 3/232 (1%)
 Frame = -1

Query: 688 VKEQTSKRELLRGVLSEGLYRLQLHQTPTTSPATSHPMLSCVSKRPAHFQXXXXXXXXXX 509
           VK++ + R LL G + +GLY+L    T T             +KRP  F           
Sbjct: 325 VKDKLTGRILLEGKIKDGLYQLPGGSTST-------------NKRPHVF---------FS 362

Query: 508 XXXLWHMRLGHPNNNVMRHMLSNKELLSTAPS---FCNACRIGKSKHKHYSSSFTVTTKP 338
               WH +LGHPN+ V+  ++    + ++      FC AC+ GK+ +  + +S +   +P
Sbjct: 363 IKETWHRKLGHPNSKVLNEVMKLCNIEASPCENFEFCEACQFGKAHNLPFQNSVSCAKEP 422

Query: 337 LEIIHSDVWGPAPILSKDGFRYYVHFVDDYTNFTWIYPLKLKSEVKDIFLHFQNLVERKF 158
           L+++HSDVWGPAPI S  GF+YYV F+DD++ FTWIYPLK KS+V   F+ F+NLVE +F
Sbjct: 423 LDLVHSDVWGPAPISSVSGFKYYVLFLDDWSRFTWIYPLKQKSDVFQAFIQFRNLVENQF 482

Query: 157 ETKIKTLQSDWGGEYRSLAPILQTLGIHFRHPCPHTHPQNGKSERKHRHIVE 2
             +IKTLQ D GGE++SL+ +L   GI  R  CP+T  QNG++ERKHRH+VE
Sbjct: 483 NKRIKTLQCDGGGEFKSLSKVLIKTGIQLRESCPYTSAQNGRAERKHRHVVE 534


>dbj|GAU19483.1| hypothetical protein TSUD_77270 [Trifolium subterraneum]
          Length = 1353

 Score =  194 bits (492), Expect = 4e-53
 Identities = 98/232 (42%), Positives = 137/232 (59%), Gaps = 3/232 (1%)
 Frame = -1

Query: 688  VKEQTSKRELLRGVLSEGLYRLQLHQTPTTSPATSHPMLSCVSKRPAHFQXXXXXXXXXX 509
            VK++ + + +L+G+L +GLY+L                 S   + P+ F           
Sbjct: 398  VKDKLTGKVILKGLLKDGLYQL-----------------SGTKRNPSAF---------VS 431

Query: 508  XXXLWHMRLGHPNNNVMRHMLSNKELL---STAPSFCNACRIGKSKHKHYSSSFTVTTKP 338
                WH RLGHPNN V+  +L + ++    S   SFC AC+ GK     + SS +   +P
Sbjct: 432  VKESWHRRLGHPNNKVLDKVLESCKVKVPPSDNFSFCEACQYGKMHLLPFKSSSSHAQEP 491

Query: 337  LEIIHSDVWGPAPILSKDGFRYYVHFVDDYTNFTWIYPLKLKSEVKDIFLHFQNLVERKF 158
            LE++H+DVWGPAPI++  GF+YYVHFVDD++ FTWIYPLK KSE    F+ F+NL E +F
Sbjct: 492  LELVHTDVWGPAPIMTSSGFKYYVHFVDDFSRFTWIYPLKQKSETVQAFIQFKNLTENQF 551

Query: 157  ETKIKTLQSDWGGEYRSLAPILQTLGIHFRHPCPHTHPQNGKSERKHRHIVE 2
              +IK +Q D GGEY+ +  +    GI FR  CP+T  QNG++ERKHRHI E
Sbjct: 552  NKRIKVIQCDGGGEYKPVQKLAVEAGIQFRMSCPYTSQQNGRAERKHRHITE 603


>gb|PNY01489.1| copia-like polyprotein, partial [Trifolium pratense]
          Length = 1000

 Score =  192 bits (489), Expect = 8e-53
 Identities = 100/232 (43%), Positives = 139/232 (59%), Gaps = 3/232 (1%)
 Frame = -1

Query: 688  VKEQTSKRELLRGVLSEGLYRLQLHQTPTTSPATSHPMLSCVSKRPAHFQXXXXXXXXXX 509
            VK++ + + LL+G L +GLY+L        SP ++      +S + +             
Sbjct: 400  VKDKLTGQTLLKGRLKDGLYQLS-----DVSPQSNKDPCVYMSVKES------------- 441

Query: 508  XXXLWHMRLGHPNNNVMRHMLSN---KELLSTAPSFCNACRIGKSKHKHYSSSFTVTTKP 338
                WH +LGHPNN V+  +L +   K   S   SFC AC+ GK     + SS +   +P
Sbjct: 442  ----WHRKLGHPNNKVLEKVLKDCNVKISPSDQFSFCEACQFGKLHLLPFKSSSSHVQEP 497

Query: 337  LEIIHSDVWGPAPILSKDGFRYYVHFVDDYTNFTWIYPLKLKSEVKDIFLHFQNLVERKF 158
            L +IHSDVWGPAPILS  GF+YYVHF+DD++ FTWI+PLK KS+    F+ F+NL E +F
Sbjct: 498  LGLIHSDVWGPAPILSPSGFKYYVHFIDDFSRFTWIFPLKQKSDTIHAFIQFKNLAENQF 557

Query: 157  ETKIKTLQSDWGGEYRSLAPILQTLGIHFRHPCPHTHPQNGKSERKHRHIVE 2
              KIK +Q D GGEY+++  +    GI FR  CP+T  QNG++ERKHRH+VE
Sbjct: 558  NKKIKIIQCDGGGEYKAVQKVSIEAGIQFRMSCPYTSQQNGRAERKHRHVVE 609


>gb|PNY02796.1| copia protein (gag-int-pol protein), partial [Trifolium pratense]
          Length = 1009

 Score =  192 bits (488), Expect = 1e-52
 Identities = 93/232 (40%), Positives = 138/232 (59%), Gaps = 3/232 (1%)
 Frame = -1

Query: 688 VKEQTSKRELLRGVLSEGLYRLQLHQTPTTSPATSHPMLSCVSKRPAHFQXXXXXXXXXX 509
           VK++ + + LL+G L EGLY++    + +   A ++  +                     
Sbjct: 125 VKDKLTGKALLKGKLKEGLYQVSNVSSQSNKDACTYMSVK-------------------- 164

Query: 508 XXXLWHMRLGHPNNNVMRHMLSNKELLSTAPS---FCNACRIGKSKHKHYSSSFTVTTKP 338
               WH +LGHPNN V+  +L +  + +++     FC AC+ GK     + SS++   +P
Sbjct: 165 --ESWHRKLGHPNNKVLDKVLKHCNVKTSSSDQFKFCEACQFGKLHLLPFKSSYSHAQEP 222

Query: 337 LEIIHSDVWGPAPILSKDGFRYYVHFVDDYTNFTWIYPLKLKSEVKDIFLHFQNLVERKF 158
           L++IH+DVWGPAPI+S  GF+YYVHF+DD++ FTWIYPLK KSE    F  F+ LVE +F
Sbjct: 223 LDLIHTDVWGPAPIMSNSGFKYYVHFIDDFSRFTWIYPLKQKSETIHAFTQFKTLVENQF 282

Query: 157 ETKIKTLQSDWGGEYRSLAPILQTLGIHFRHPCPHTHPQNGKSERKHRHIVE 2
             +IK +Q D GGEY+++  +    GI FR  CP+T  QNG++ERKHRH+ E
Sbjct: 283 NKRIKIVQCDGGGEYKAVQKLALEAGIQFRMSCPYTSQQNGRAERKHRHVAE 334


>gb|PNX78574.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 677

 Score =  188 bits (477), Expect = 4e-52
 Identities = 98/233 (42%), Positives = 139/233 (59%), Gaps = 4/233 (1%)
 Frame = -1

Query: 688  VKEQTSKRELLRGVLSEGLYRLQLHQTPTTSPATSHPMLSCVSKRPAHFQXXXXXXXXXX 509
            VK++ + + LLRG+L +GLY+L    + T             +K P  +           
Sbjct: 402  VKDKLTGKVLLRGILKDGLYQLSNGSSQT-------------NKDPCVY---------LS 439

Query: 508  XXXLWHMRLGHPNNNVMRHMLSNKELLSTAPS----FCNACRIGKSKHKHYSSSFTVTTK 341
                WH +LGHP+NNV+  +L    +  T+PS    FC AC++GKS    + SS +   +
Sbjct: 440  VKESWHRKLGHPSNNVLDKVLKICNV-KTSPSDKFKFCEACQLGKSHLLPFKSSSSHAQE 498

Query: 340  PLEIIHSDVWGPAPILSKDGFRYYVHFVDDYTNFTWIYPLKLKSEVKDIFLHFQNLVERK 161
             LE+IH+DVWGPAPI S  GF+YYVHF+DD + FTWIYPLK KS+    F+ F+N+VE +
Sbjct: 499  VLELIHTDVWGPAPINSISGFKYYVHFIDDSSRFTWIYPLKQKSDTIHAFMQFKNMVENQ 558

Query: 160  FETKIKTLQSDWGGEYRSLAPILQTLGIHFRHPCPHTHPQNGKSERKHRHIVE 2
            F  +IK +Q D GGE++ +  +    GI FR  CP+T  QNG++ERKHRH+ E
Sbjct: 559  FNKRIKIIQCDGGGEFKPVQKVALETGIKFRMSCPYTSQQNGRAERKHRHVAE 611


>gb|KYP61012.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 340

 Score =  180 bits (456), Expect = 8e-52
 Identities = 85/168 (50%), Positives = 116/168 (69%), Gaps = 3/168 (1%)
 Frame = -1

Query: 496 WHMRLGHPNNNVMRHMLSNKELLST---APSFCNACRIGKSKHKHYSSSFTVTTKPLEII 326
           WH RLGHPN++V++ + +   LLS+      FC++C +GKS+    S+S T+ + PL++I
Sbjct: 94  WHTRLGHPNSHVLKLVHTQCNLLSSNTQVTKFCSSCCVGKSRRLPSSASQTIYSAPLDLI 153

Query: 325 HSDVWGPAPILSKDGFRYYVHFVDDYTNFTWIYPLKLKSEVKDIFLHFQNLVERKFETKI 146
            +++WGP+ I S  G+ YYV F+D ++ +TWIYPLK K E   IF  F+ +VE +F TKI
Sbjct: 154 FTNLWGPSHITSFSGYLYYVAFIDAFSKYTWIYPLKSKVETLSIFQQFKAMVELQFNTKI 213

Query: 145 KTLQSDWGGEYRSLAPILQTLGIHFRHPCPHTHPQNGKSERKHRHIVE 2
           K++QSDWGGEYR+    L T GI  R  CPHTH QNG  ERKHRHIVE
Sbjct: 214 KSVQSDWGGEYRAFTSFLATNGIKHRVICPHTHHQNGVVERKHRHIVE 261


>gb|PNX94503.1| putative retrotransposon Ty1-copia subclass protein, partial
            [Trifolium pratense]
          Length = 1242

 Score =  188 bits (478), Expect = 3e-51
 Identities = 96/233 (41%), Positives = 139/233 (59%), Gaps = 4/233 (1%)
 Frame = -1

Query: 688  VKEQTSKRELLRGVLSEGLYRLQLHQTPTTSPATSHPMLSCVSKRPAHFQXXXXXXXXXX 509
            VK++ + + LL+G L +GLY+L  ++ P T+            K P  +           
Sbjct: 400  VKDKLTGKALLKGRLKDGLYQLSANKEPPTN------------KDPCAY---------IS 438

Query: 508  XXXLWHMRLGHPNNNVMRHMLSNKELLSTAPS----FCNACRIGKSKHKHYSSSFTVTTK 341
               +WH +LGHPNN V+  +L +  +   +PS    FC AC+ GK     + +S +   +
Sbjct: 439  LKEIWHRKLGHPNNKVLEKVLKDNNV-KISPSDKFTFCEACQFGKLHLLPFKTSSSHAKE 497

Query: 340  PLEIIHSDVWGPAPILSKDGFRYYVHFVDDYTNFTWIYPLKLKSEVKDIFLHFQNLVERK 161
            PL++IH+DVWGPAPILS+  F+YYVHF+DD++ FTWI+PLK KSE    F  F+NLVE +
Sbjct: 498  PLDLIHTDVWGPAPILSQSNFKYYVHFLDDFSRFTWIFPLKQKSETIHAFNQFKNLVENQ 557

Query: 160  FETKIKTLQSDWGGEYRSLAPILQTLGIHFRHPCPHTHPQNGKSERKHRHIVE 2
            F  KIK ++ D GGEY+ +       GI F+  CP+T  QNG++ERKHRH+ E
Sbjct: 558  FNKKIKVIRCDGGGEYKPVQKCAIDSGIQFQMSCPYTSQQNGRAERKHRHVTE 610


>gb|PKA49422.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Apostasia shenzhenica]
          Length = 494

 Score =  182 bits (462), Expect = 4e-51
 Identities = 96/232 (41%), Positives = 137/232 (59%), Gaps = 3/232 (1%)
 Frame = -1

Query: 688 VKEQTSKRELLRGVLSEGLYRLQLHQTPTTSPATSHPMLSCVSKRPAHFQXXXXXXXXXX 509
           V+++ + + LLRG    GLY +     P  SP       + V +R               
Sbjct: 12  VQDRATGKILLRGGTKNGLYHI-----PVPSPT------ALVGERTTKLS---------- 50

Query: 508 XXXLWHMRLGHPNNNVMRHMLSNKELLSTAPS---FCNACRIGKSKHKHYSSSFTVTTKP 338
               WH RLGHP+   +  ++    L ++ P+    C+AC   KS    +SSS   ++ P
Sbjct: 51  ----WHARLGHPSLRTVHQIIQKYGLPTSPPTTSRICSACMKAKSHKLSFSSSTCTSSSP 106

Query: 337 LEIIHSDVWGPAPILSKDGFRYYVHFVDDYTNFTWIYPLKLKSEVKDIFLHFQNLVERKF 158
           LE+I+SD+WGPAPI+S +GF YYV FVD+++ FTW++P+K KS++ DIFL+FQN VER F
Sbjct: 107 LELIYSDIWGPAPIISNEGFSYYVIFVDNFSKFTWLFPMKRKSDLIDIFLNFQNHVERFF 166

Query: 157 ETKIKTLQSDWGGEYRSLAPILQTLGIHFRHPCPHTHPQNGKSERKHRHIVE 2
             KI++  SDWGGEY++L   L + GI  +  CPHT  QN  +ERKHRHI+E
Sbjct: 167 NCKIRSFHSDWGGEYQALHRHLYSSGIIHQVSCPHTPEQNDSAERKHRHIIE 218


>gb|PKA60107.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Apostasia shenzhenica]
          Length = 696

 Score =  186 bits (471), Expect = 4e-51
 Identities = 99/232 (42%), Positives = 135/232 (58%), Gaps = 3/232 (1%)
 Frame = -1

Query: 688  VKEQTSKRELLRGVLSEGLYRLQLHQTPTTSPATSHPMLSCVSKRPAHFQXXXXXXXXXX 509
            VK++ + + LLRG    GLY +     P  SP       + + +R               
Sbjct: 417  VKDRATGKILLRGETKNGLYHI-----PVPSPT------ALIGERTTKL----------- 454

Query: 508  XXXLWHMRLGHPNNNVMRHMLSNKELLSTAPS---FCNACRIGKSKHKHYSSSFTVTTKP 338
               LWH RLGHP    +  ++    L ++ P+    C+AC   KS    +SSS   +T P
Sbjct: 455  ---LWHARLGHPCLRTVHQIIQKYGLPTSPPTTSRICSACMKAKSHKLSFSSSTCTSTSP 511

Query: 337  LEIIHSDVWGPAPILSKDGFRYYVHFVDDYTNFTWIYPLKLKSEVKDIFLHFQNLVERKF 158
            LE+I+SD+WGPAPI+S +GF YY  FVDD++ FTW++P+K KS++ DIFL FQ  VER F
Sbjct: 512  LELIYSDIWGPAPIISNEGFSYYFIFVDDFSKFTWLFPIKRKSDLVDIFLSFQKHVERFF 571

Query: 157  ETKIKTLQSDWGGEYRSLAPILQTLGIHFRHPCPHTHPQNGKSERKHRHIVE 2
              KI++  SDWGGEY++L   L + GI  R  CPHT  QNG +ERKHRHI+E
Sbjct: 572  NCKIRSFHSDWGGEYQALHRHLNSSGITHRVSCPHTPEQNGSAERKHRHIIE 623


>gb|KYP31892.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 264

 Score =  175 bits (444), Expect = 7e-51
 Identities = 91/226 (40%), Positives = 127/226 (56%), Gaps = 4/226 (1%)
 Frame = -1

Query: 667 RELLRGVLSEGLYRLQLHQTPTTSPATSHPMLSCVSKRPAHFQXXXXXXXXXXXXXLWHM 488
           + +LRG L +GLY+L           T     + VS + +                 WH 
Sbjct: 1   KAILRGTLKDGLYQLL---------RTERDPCAYVSVKES-----------------WHR 34

Query: 487 RLGHPNNNVMRHMLSNKELLSTAPS----FCNACRIGKSKHKHYSSSFTVTTKPLEIIHS 320
           RLGHPNN  +  +L +  +   +PS    FC AC+ GK     + +S +   +  E++H+
Sbjct: 35  RLGHPNNKFLDRVLKSCNV-KLSPSDHFNFCEACQYGKMHFLPFKTSSSHAKEIFELVHT 93

Query: 319 DVWGPAPILSKDGFRYYVHFVDDYTNFTWIYPLKLKSEVKDIFLHFQNLVERKFETKIKT 140
           DVWGPAP+ S  GF+YYVHF+DD++ FTWIYPLK KS+    F  F+N+ E  F  +IKT
Sbjct: 94  DVWGPAPVTSPSGFKYYVHFLDDFSRFTWIYPLKHKSDTAQAFTQFKNMAENLFNKRIKT 153

Query: 139 LQSDWGGEYRSLAPILQTLGIHFRHPCPHTHPQNGKSERKHRHIVE 2
           +Q D GGEY+++       GI FR  CP+T  QNG++ERKHRHI E
Sbjct: 154 IQCDGGGEYKTVQNHAIEAGIQFRMSCPYTSQQNGRAERKHRHITE 199


>ref|XP_015386863.1| PREDICTED: uncharacterized protein LOC107177515 [Citrus sinensis]
          Length = 1143

 Score =  187 bits (474), Expect = 1e-50
 Identities = 85/170 (50%), Positives = 113/170 (66%), Gaps = 5/170 (2%)
 Frame = -1

Query: 496  WHMRLGHPNNNVMRHMLSNKELLSTAPS-----FCNACRIGKSKHKHYSSSFTVTTKPLE 332
            +H RLGHP+++V+ H++     + T         C+AC++GK    H+S + T T  PLE
Sbjct: 538  FHQRLGHPSSHVLNHVIKTCSFVKTINGNRTFDSCDACKMGKMHRLHFSVTETKTKFPLE 597

Query: 331  IIHSDVWGPAPILSKDGFRYYVHFVDDYTNFTWIYPLKLKSEVKDIFLHFQNLVERKFET 152
            I+H+D+WGP+P++S  G+RYYV FVDD T FTWI+PLK K E   +F  F+  +E++F  
Sbjct: 598  ILHTDLWGPSPVISPQGYRYYVSFVDDCTRFTWIFPLKTKDETLPVFKIFKTQIEKQFSR 657

Query: 151  KIKTLQSDWGGEYRSLAPILQTLGIHFRHPCPHTHPQNGKSERKHRHIVE 2
             IK LQSDWGGE+RS    L   GI FRH CP+TH QNG  ERKHRHI E
Sbjct: 658  PIKCLQSDWGGEFRSFVNYLLAEGIQFRHLCPYTHNQNGLVERKHRHITE 707


>dbj|GAU51268.1| hypothetical protein TSUD_412550 [Trifolium subterraneum]
          Length = 1387

 Score =  187 bits (474), Expect = 1e-50
 Identities = 97/232 (41%), Positives = 133/232 (57%), Gaps = 3/232 (1%)
 Frame = -1

Query: 688  VKEQTSKRELLRGVLSEGLYRLQLHQTPTTSPATSHPMLSCVSKRPAHFQXXXXXXXXXX 509
            VK++ + + LL+G L +GLY+L                    +K P  +           
Sbjct: 400  VKDKLTGQTLLKGRLKDGLYQLS-------------------NKEPCVYMSVKES----- 435

Query: 508  XXXLWHMRLGHPNNNVMRHMLSN---KELLSTAPSFCNACRIGKSKHKHYSSSFTVTTKP 338
                WH +LGHPNN V+  +L +   K   S   SFC AC+ GK     +  S +   +P
Sbjct: 436  ----WHRKLGHPNNKVLDKVLKDCNVKISHSDQFSFCEACQFGKLHLLPFKPSSSHVQEP 491

Query: 337  LEIIHSDVWGPAPILSKDGFRYYVHFVDDYTNFTWIYPLKLKSEVKDIFLHFQNLVERKF 158
            L +IHSDVWGPAPILS  GF+YYVHF+DD++ FTWI+PLK KS+    F+ F+NL E +F
Sbjct: 492  LALIHSDVWGPAPILSPSGFKYYVHFIDDFSRFTWIFPLKQKSDTIHAFIQFKNLAENQF 551

Query: 157  ETKIKTLQSDWGGEYRSLAPILQTLGIHFRHPCPHTHPQNGKSERKHRHIVE 2
              KIK +Q D GGEY+++  +    GI FR  CP+T  QNG++ERKHRH+ E
Sbjct: 552  NKKIKIIQCDGGGEYKAVQKVSIEAGIQFRMSCPYTSQQNGRAERKHRHVAE 603


>emb|CAN74951.1| hypothetical protein VITISV_030567, partial [Vitis vinifera]
          Length = 2203

 Score =  187 bits (474), Expect = 1e-50
 Identities = 104/256 (40%), Positives = 139/256 (54%), Gaps = 27/256 (10%)
 Frame = -1

Query: 688  VKEQTSKRELLRGVLSEGLYRLQLHQTPT-------------------TSPATSH----- 581
            VK++ S+  LL+G L EGLY+L + +  +                   T+P+T +     
Sbjct: 358  VKDKKSREILLQGNLKEGLYQLDISKVSSNRQFVGFSEDTNVFLPHLATTPSTVNKQSVA 417

Query: 580  PMLSCVSKRPAHFQXXXXXXXXXXXXXLWHMRLGHPNNNVMRHMLSN---KELLSTAPSF 410
            P +    +                   LWH RLGHP N ++  +L     K  L    +F
Sbjct: 418  PSVGYSLQVNKIESTRCVEDNNTGVGHLWHQRLGHPCNKIVSLVLDRLGIKSKLQNELNF 477

Query: 409  CNACRIGKSKHKHYSSSFTVTTKPLEIIHSDVWGPAPILSKDGFRYYVHFVDDYTNFTWI 230
            C AC +GK+K     ++   T  P E++ SDVW PA   S DG++YY+ FVD +TN+TWI
Sbjct: 478  CTACPLGKAKQFPLPTTINKTQVPFELVFSDVWEPAHTTSCDGYKYYIAFVDAFTNYTWI 537

Query: 229  YPLKLKSEVKDIFLHFQNLVERKFETKIKTLQSDWGGEYRSLAPILQTLGIHFRHPCPHT 50
            YP + KS+   I L F  LV+RKF TK+K LQ+DWGGE+  L  +LQ  GI FRHPCPH 
Sbjct: 538  YPRQQKSQATSIVLQFIALVDRKFPTKLKCLQTDWGGEFHPLQSLLQKKGILFRHPCPHV 597

Query: 49   HPQNGKSERKHRHIVE 2
            H QNGK ERKHR IVE
Sbjct: 598  HQQNGKVERKHRSIVE 613



 Score = 94.0 bits (232), Expect = 3e-18
 Identities = 59/175 (33%), Positives = 89/175 (50%), Gaps = 10/175 (5%)
 Frame = -1

Query: 496  WHMRLGHPNNNVMRHMLSNKELLSTAPSF-------CNACRIGKS-KHKHYSSSFTVTTK 341
            WH RLGH N +++   L+  EL+   P         C AC++GK  K+   + +F  T++
Sbjct: 1035 WHRRLGHANMDLISQ-LNKDELVRGLPKINFQKDKICEACQMGKQIKNSFKNKNFISTSR 1093

Query: 340  PLEIIHSDVWGPAPILSKDGFRYYVHFVDDYTNFTWIYPLKLKSEVKDIFLHFQNLVERK 161
            PLE++H D++GP+   S  G  Y    VDD++ +TW+  L  KSE    F  F N V+ +
Sbjct: 1094 PLELLHMDLFGPSRTPSLGGKSYAYVIVDDFSRYTWVLFLSQKSEAFYEFSKFCNKVQNE 1153

Query: 160  FETKIKTLQSDWGGEYRS--LAPILQTLGIHFRHPCPHTHPQNGKSERKHRHIVE 2
                I  ++SD G E+ +          GI+     P T  QNG  ERK+R + E
Sbjct: 1154 KGFSITCIRSDHGREFENFDFEEYCNKHGINHNFSAPRTPQQNGVVERKNRTLQE 1208


>gb|KYP36077.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 383

 Score =  178 bits (451), Expect = 1e-50
 Identities = 95/230 (41%), Positives = 131/230 (56%), Gaps = 1/230 (0%)
 Frame = -1

Query: 688 VKEQTSKRELLRGVLS-EGLYRLQLHQTPTTSPATSHPMLSCVSKRPAHFQXXXXXXXXX 512
           VK QT++  LL G +  +GLY     Q PT    T   + S  +   AH +         
Sbjct: 39  VKSQTTREILLHGTVGLDGLY-----QFPTLLSNTK--LQSVQTSSTAHQRSAHSTTKGY 91

Query: 511 XXXXLWHMRLGHPNNNVMRHMLSNKELLSTAPSFCNACRIGKSKHKHYSSSFTVTTKPLE 332
                WH RLGHPN ++M+ ++ N     T P+FC++C +GKS   HY  S +V   P E
Sbjct: 92  VSFATWHSRLGHPNTDIMK-LVDN-----TTPAFCDSCCLGKSHRLHYGPSTSVYIAPFE 145

Query: 331 IIHSDVWGPAPILSKDGFRYYVHFVDDYTNFTWIYPLKLKSEVKDIFLHFQNLVERKFET 152
           +I +++WGPA +    GF+YY+ FVD +T FTWIY LK K++   +F  F N+V+ +F+ 
Sbjct: 146 LIFNNLWGPASVTFTCGFQYYITFVDAHTRFTWIYLLKNKAQTIGVFKQFHNMVKNQFQL 205

Query: 151 KIKTLQSDWGGEYRSLAPILQTLGIHFRHPCPHTHPQNGKSERKHRHIVE 2
            IK LQ+DWGGEYR     L  + I     CPHTH Q+G  ERKHRHI+E
Sbjct: 206 PIKALQTDWGGEYRPFKAYLNDVRIQHHLICPHTHHQDGVVERKHRHIIE 255


>gb|KYP41416.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 201

 Score =  172 bits (436), Expect = 2e-50
 Identities = 81/168 (48%), Positives = 111/168 (66%), Gaps = 3/168 (1%)
 Frame = -1

Query: 496 WHMRLGHPNNNVMRHMLSN---KELLSTAPSFCNACRIGKSKHKHYSSSFTVTTKPLEII 326
           W  RLGHP++ ++  +L N   K     + SFC AC+ GKS    + SS +   KPL++I
Sbjct: 1   WRRRLGHPSSKILEQVLKNWNIKVPSKDSLSFCEACQFGKSHLLPFKSSISRAKKPLDLI 60

Query: 325 HSDVWGPAPILSKDGFRYYVHFVDDYTNFTWIYPLKLKSEVKDIFLHFQNLVERKFETKI 146
           H+DVWGPAPI S  GFRYYVHF++D+  FTW +PLK KS+    F+ F+++V+ +F  KI
Sbjct: 61  HTDVWGPAPISSSSGFRYYVHFLNDFNKFTWTFPLKQKSD----FMQFKSMVKNQFNRKI 116

Query: 145 KTLQSDWGGEYRSLAPILQTLGIHFRHPCPHTHPQNGKSERKHRHIVE 2
           K LQ D GGEY++L  ++Q  GI     C +T  QNG+ ERKHRH+VE
Sbjct: 117 KFLQCDGGGEYKALEKLIQECGIQLGMSCQYTSAQNGQVERKHRHVVE 164


>gb|KHN36156.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1417

 Score =  186 bits (472), Expect = 2e-50
 Identities = 104/245 (42%), Positives = 138/245 (56%), Gaps = 16/245 (6%)
 Frame = -1

Query: 688  VKEQTSKRELLRGVL-SEGLYRLQLHQTPTTSPATSHPMLSCVSK--------RPAHFQX 536
            VK Q SK+ LL G + ++GLY+ +  +  T S A S+   S +S          P +   
Sbjct: 426  VKYQDSKQVLLEGTVGADGLYQFKPFKFLTNSGAASNSDSSSMSSSSQFSVFNNPVNCNN 485

Query: 535  XXXXXXXXXXXXLWHMRLGHPNNNVMRHML-------SNKELLSTAPSFCNACRIGKSKH 377
                        +WH+RLGH + + ++++L       SNK    TA   C  C +GKS  
Sbjct: 486  TVSVMQNGNVFQMWHLRLGHAHTSAVKNILNLCNIPFSNK----TATLPCTFCCMGKSHR 541

Query: 376  KHYSSSFTVTTKPLEIIHSDVWGPAPILSKDGFRYYVHFVDDYTNFTWIYPLKLKSEVKD 197
             H   S TV TKP E+IH D+WGPAP +S  G+ YY+ FVD YT FTWIY LK KS+   
Sbjct: 542  LHSPLSNTVYTKPFEVIHCDLWGPAPFVSYYGYSYYITFVDTYTKFTWIYFLKAKSDALK 601

Query: 196  IFLHFQNLVERKFETKIKTLQSDWGGEYRSLAPILQTLGIHFRHPCPHTHPQNGKSERKH 17
             F  F+ L++ +F+  IK +QSDWGGE+R+   +L  LGI  R  CPHT  QNG  ERKH
Sbjct: 602  AFTQFKALIQNQFQASIKAIQSDWGGEFRAFTALLNELGIQHRLTCPHTSHQNGTVERKH 661

Query: 16   RHIVE 2
            RHIVE
Sbjct: 662  RHIVE 666


>gb|KHN22040.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Glycine soja]
          Length = 1417

 Score =  186 bits (472), Expect = 2e-50
 Identities = 104/245 (42%), Positives = 138/245 (56%), Gaps = 16/245 (6%)
 Frame = -1

Query: 688  VKEQTSKRELLRGVL-SEGLYRLQLHQTPTTSPATSHPMLSCVSK--------RPAHFQX 536
            VK Q SK+ LL G + ++GLY+ +  +  T S A S+   S +S          P +   
Sbjct: 426  VKYQDSKQVLLEGTVGADGLYQFKPFKFLTNSGAASNSDSSSMSSSSQFSVFNNPVNCNN 485

Query: 535  XXXXXXXXXXXXLWHMRLGHPNNNVMRHML-------SNKELLSTAPSFCNACRIGKSKH 377
                        +WH+RLGH + + ++++L       SNK    TA   C  C +GKS  
Sbjct: 486  TVSVMQNGNVFQMWHLRLGHAHTSAVKNILNLCNIPFSNK----TATLPCTFCCMGKSHR 541

Query: 376  KHYSSSFTVTTKPLEIIHSDVWGPAPILSKDGFRYYVHFVDDYTNFTWIYPLKLKSEVKD 197
             H   S TV TKP E+IH D+WGPAP +S  G+ YY+ FVD YT FTWIY LK KS+   
Sbjct: 542  LHSPLSNTVYTKPFEVIHCDLWGPAPFVSYYGYSYYITFVDTYTKFTWIYFLKAKSDALK 601

Query: 196  IFLHFQNLVERKFETKIKTLQSDWGGEYRSLAPILQTLGIHFRHPCPHTHPQNGKSERKH 17
             F  F+ L++ +F+  IK +QSDWGGE+R+   +L  LGI  R  CPHT  QNG  ERKH
Sbjct: 602  AFTQFKALIQNQFQASIKAIQSDWGGEFRAFTALLNELGIQHRLTCPHTSHQNGTVERKH 661

Query: 16   RHIVE 2
            RHIVE
Sbjct: 662  RHIVE 666