BLASTX nr result

ID: Rehmannia32_contig00017531 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00017531
         (522 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KHG13075.1| Rbm5 [Gossypium arboreum]                              102   7e-32
gb|KHG13074.1| rbm5-a: RNA-binding protein 5-A [Gossypium arboreum]   102   7e-32
gb|PIN07457.1| RNA-binding protein RBM8/Tsunagi (RRM superfamily...   117   1e-27
ref|XP_015084982.1| PREDICTED: RNA-binding protein 5-B isoform X...   117   2e-27
ref|XP_006358600.1| PREDICTED: RNA-binding protein 10 isoform X5...   117   2e-27
ref|XP_020535760.1| SUPPRESSOR OF ABI3-5 isoform X3 [Jatropha cu...   117   2e-27
ref|XP_006358599.1| PREDICTED: RNA-binding protein 5-A isoform X...   117   2e-27
ref|XP_004245861.1| PREDICTED: SUPPRESSOR OF ABI3-5 isoform X7 [...   117   2e-27
ref|XP_015084981.1| PREDICTED: RNA-binding protein 5 isoform X7 ...   117   2e-27
ref|XP_019070789.1| PREDICTED: SUPPRESSOR OF ABI3-5 isoform X6 [...   117   2e-27
ref|XP_006358598.1| PREDICTED: RNA-binding protein 5-A isoform X...   117   2e-27
ref|XP_015084983.1| PREDICTED: RNA-binding protein 5-B isoform X...   117   2e-27
ref|XP_019070788.1| PREDICTED: SUPPRESSOR OF ABI3-5 isoform X5 [...   117   2e-27
ref|XP_010325545.1| PREDICTED: SUPPRESSOR OF ABI3-5 isoform X4 [...   117   2e-27
ref|XP_019070787.1| PREDICTED: SUPPRESSOR OF ABI3-5 isoform X3 [...   117   2e-27
ref|XP_015084980.1| PREDICTED: RNA-binding protein 5 isoform X6 ...   117   2e-27
ref|XP_015084979.1| PREDICTED: RNA-binding protein 5 isoform X5 ...   117   2e-27
ref|XP_006358597.1| PREDICTED: RNA-binding protein 5-A isoform X...   117   2e-27
ref|XP_015084978.1| PREDICTED: RNA-binding protein 5-B isoform X...   117   2e-27
ref|XP_006358595.1| PREDICTED: RNA-binding protein 5-A isoform X...   117   2e-27

>gb|KHG13075.1| Rbm5 [Gossypium arboreum]
          Length = 888

 Score =  102 bits (254), Expect(2) = 7e-32
 Identities = 51/55 (92%), Positives = 51/55 (92%)
 Frame = -3

Query: 172 APSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSV 8
           APSATVVVKGLS KTTEEDL QILAEWGPLRHVRVIKER SGIS GFAFIDFPSV
Sbjct: 264 APSATVVVKGLSHKTTEEDLCQILAEWGPLRHVRVIKERTSGISHGFAFIDFPSV 318



 Score = 62.8 bits (151), Expect(2) = 7e-32
 Identities = 48/115 (41%), Positives = 64/115 (55%)
 Frame = -1

Query: 522 TAVKEIMIMEDRVMILTMTEAVGEMVTGEDENLVTANGTREA*VEKRMKVLIEGMSTLLH 343
           TAV+ IM + + VMIL + EAV EM  G   N V    +    VEK ++V I+GM  L H
Sbjct: 149 TAVRGIMNIVEIVMILVIKEAVAEMAVGGSVNHVIEIVS----VEKEIRVHIKGMRGLGH 204

Query: 342 IPVLILGAVMIGQGQGLLEAGVMVEVIGETVMMIVTMIEVTGEEIVKIDVSMTII 178
            PV     VMI Q QG LE G M E I  T M+I+ M ++  +   K ++S +II
Sbjct: 205 DPV----DVMIVQDQGHLEFGAMGEAIERTAMIIIKMRKLRSKGTEKGNISWSII 255


>gb|KHG13074.1| rbm5-a: RNA-binding protein 5-A [Gossypium arboreum]
          Length = 605

 Score =  102 bits (254), Expect(2) = 7e-32
 Identities = 51/55 (92%), Positives = 51/55 (92%)
 Frame = -3

Query: 172 APSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSV 8
           APSATVVVKGLS KTTEEDL QILAEWGPLRHVRVIKER SGIS GFAFIDFPSV
Sbjct: 264 APSATVVVKGLSHKTTEEDLCQILAEWGPLRHVRVIKERTSGISHGFAFIDFPSV 318



 Score = 62.8 bits (151), Expect(2) = 7e-32
 Identities = 48/115 (41%), Positives = 64/115 (55%)
 Frame = -1

Query: 522 TAVKEIMIMEDRVMILTMTEAVGEMVTGEDENLVTANGTREA*VEKRMKVLIEGMSTLLH 343
           TAV+ IM + + VMIL + EAV EM  G   N V    +    VEK ++V I+GM  L H
Sbjct: 149 TAVRGIMNIVEIVMILVIKEAVAEMAVGGSVNHVIEIVS----VEKEIRVHIKGMRGLGH 204

Query: 342 IPVLILGAVMIGQGQGLLEAGVMVEVIGETVMMIVTMIEVTGEEIVKIDVSMTII 178
            PV     VMI Q QG LE G M E I  T M+I+ M ++  +   K ++S +II
Sbjct: 205 DPV----DVMIVQDQGHLEFGAMGEAIERTAMIIIKMRKLRSKGTEKGNISWSII 255


>gb|PIN07457.1| RNA-binding protein RBM8/Tsunagi (RRM superfamily) [Handroanthus
           impetiginosus]
          Length = 496

 Score =  117 bits (293), Expect = 1e-27
 Identities = 58/59 (98%), Positives = 58/59 (98%)
 Frame = -3

Query: 178 SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDS 2
           SV PSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDS
Sbjct: 245 SVVPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDS 303


>ref|XP_015084982.1| PREDICTED: RNA-binding protein 5-B isoform X8 [Solanum pennellii]
          Length = 888

 Score =  117 bits (294), Expect = 2e-27
 Identities = 58/59 (98%), Positives = 59/59 (100%)
 Frame = -3

Query: 178 SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDS 2
           SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVD+
Sbjct: 118 SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDA 176


>ref|XP_006358600.1| PREDICTED: RNA-binding protein 10 isoform X5 [Solanum tuberosum]
          Length = 942

 Score =  117 bits (294), Expect = 2e-27
 Identities = 58/59 (98%), Positives = 59/59 (100%)
 Frame = -3

Query: 178 SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDS 2
           SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVD+
Sbjct: 276 SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDA 334


>ref|XP_020535760.1| SUPPRESSOR OF ABI3-5 isoform X3 [Jatropha curcas]
          Length = 957

 Score =  117 bits (294), Expect = 2e-27
 Identities = 58/59 (98%), Positives = 59/59 (100%)
 Frame = -3

Query: 178 SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDS 2
           +VAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDS
Sbjct: 173 TVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDS 231


>ref|XP_006358599.1| PREDICTED: RNA-binding protein 5-A isoform X4 [Solanum tuberosum]
          Length = 1008

 Score =  117 bits (294), Expect = 2e-27
 Identities = 58/59 (98%), Positives = 59/59 (100%)
 Frame = -3

Query: 178 SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDS 2
           SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVD+
Sbjct: 239 SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDA 297


>ref|XP_004245861.1| PREDICTED: SUPPRESSOR OF ABI3-5 isoform X7 [Solanum lycopersicum]
          Length = 1010

 Score =  117 bits (294), Expect = 2e-27
 Identities = 58/59 (98%), Positives = 59/59 (100%)
 Frame = -3

Query: 178 SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDS 2
           SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVD+
Sbjct: 239 SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDA 297


>ref|XP_015084981.1| PREDICTED: RNA-binding protein 5 isoform X7 [Solanum pennellii]
          Length = 1011

 Score =  117 bits (294), Expect = 2e-27
 Identities = 58/59 (98%), Positives = 59/59 (100%)
 Frame = -3

Query: 178 SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDS 2
           SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVD+
Sbjct: 239 SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDA 297


>ref|XP_019070789.1| PREDICTED: SUPPRESSOR OF ABI3-5 isoform X6 [Solanum lycopersicum]
          Length = 1030

 Score =  117 bits (294), Expect = 2e-27
 Identities = 58/59 (98%), Positives = 59/59 (100%)
 Frame = -3

Query: 178 SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDS 2
           SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVD+
Sbjct: 259 SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDA 317


>ref|XP_006358598.1| PREDICTED: RNA-binding protein 5-A isoform X3 [Solanum tuberosum]
          Length = 1036

 Score =  117 bits (294), Expect = 2e-27
 Identities = 58/59 (98%), Positives = 59/59 (100%)
 Frame = -3

Query: 178 SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDS 2
           SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVD+
Sbjct: 267 SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDA 325


>ref|XP_015084983.1| PREDICTED: RNA-binding protein 5-B isoform X9 [Solanum pennellii]
          Length = 1037

 Score =  117 bits (294), Expect = 2e-27
 Identities = 58/59 (98%), Positives = 59/59 (100%)
 Frame = -3

Query: 178 SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDS 2
           SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVD+
Sbjct: 268 SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDA 326


>ref|XP_019070788.1| PREDICTED: SUPPRESSOR OF ABI3-5 isoform X5 [Solanum lycopersicum]
          Length = 1038

 Score =  117 bits (294), Expect = 2e-27
 Identities = 58/59 (98%), Positives = 59/59 (100%)
 Frame = -3

Query: 178 SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDS 2
           SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVD+
Sbjct: 268 SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDA 326


>ref|XP_010325545.1| PREDICTED: SUPPRESSOR OF ABI3-5 isoform X4 [Solanum lycopersicum]
          Length = 1038

 Score =  117 bits (294), Expect = 2e-27
 Identities = 58/59 (98%), Positives = 59/59 (100%)
 Frame = -3

Query: 178 SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDS 2
           SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVD+
Sbjct: 267 SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDA 325


>ref|XP_019070787.1| PREDICTED: SUPPRESSOR OF ABI3-5 isoform X3 [Solanum lycopersicum]
          Length = 1039

 Score =  117 bits (294), Expect = 2e-27
 Identities = 58/59 (98%), Positives = 59/59 (100%)
 Frame = -3

Query: 178 SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDS 2
           SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVD+
Sbjct: 268 SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDA 326


>ref|XP_015084980.1| PREDICTED: RNA-binding protein 5 isoform X6 [Solanum pennellii]
          Length = 1039

 Score =  117 bits (294), Expect = 2e-27
 Identities = 58/59 (98%), Positives = 59/59 (100%)
 Frame = -3

Query: 178 SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDS 2
           SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVD+
Sbjct: 268 SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDA 326


>ref|XP_015084979.1| PREDICTED: RNA-binding protein 5 isoform X5 [Solanum pennellii]
          Length = 1040

 Score =  117 bits (294), Expect = 2e-27
 Identities = 58/59 (98%), Positives = 59/59 (100%)
 Frame = -3

Query: 178 SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDS 2
           SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVD+
Sbjct: 268 SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDA 326


>ref|XP_006358597.1| PREDICTED: RNA-binding protein 5-A isoform X2 [Solanum tuberosum]
          Length = 1044

 Score =  117 bits (294), Expect = 2e-27
 Identities = 58/59 (98%), Positives = 59/59 (100%)
 Frame = -3

Query: 178 SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDS 2
           SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVD+
Sbjct: 276 SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDA 334


>ref|XP_015084978.1| PREDICTED: RNA-binding protein 5-B isoform X4 [Solanum pennellii]
          Length = 1045

 Score =  117 bits (294), Expect = 2e-27
 Identities = 58/59 (98%), Positives = 59/59 (100%)
 Frame = -3

Query: 178 SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDS 2
           SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVD+
Sbjct: 276 SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDA 334


>ref|XP_006358595.1| PREDICTED: RNA-binding protein 5-A isoform X1 [Solanum tuberosum]
          Length = 1045

 Score =  117 bits (294), Expect = 2e-27
 Identities = 58/59 (98%), Positives = 59/59 (100%)
 Frame = -3

Query: 178 SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDS 2
           SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVD+
Sbjct: 276 SVAPSATVVVKGLSQKTTEEDLYQILAEWGPLRHVRVIKERNSGISRGFAFIDFPSVDA 334


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