BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00017454
         (489 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012829347.1| PREDICTED: general transcription factor IIH ...   127   1e-32
ref|XP_011101336.1| RNA polymerase II transcription factor B sub...   120   3e-30
ref|XP_016441298.1| PREDICTED: RNA polymerase II transcription f...   102   8e-24
ref|XP_016441297.1| PREDICTED: RNA polymerase II transcription f...   102   9e-24
ref|XP_016441296.1| PREDICTED: RNA polymerase II transcription f...   102   1e-23
ref|XP_019250007.1| PREDICTED: RNA polymerase II transcription f...   102   4e-23
ref|XP_019247851.1| PREDICTED: RNA polymerase II transcription f...   102   4e-23
ref|XP_019247850.1| PREDICTED: RNA polymerase II transcription f...   102   4e-23
ref|XP_022895217.1| RNA polymerase II transcription factor B sub...   101   5e-23
ref|XP_009776618.1| PREDICTED: general transcription factor IIH ...   100   3e-22
ref|XP_009626298.1| PREDICTED: RNA polymerase II transcription f...    99   4e-22
ref|XP_016507557.1| PREDICTED: RNA polymerase II transcription f...    99   4e-22
ref|XP_016507556.1| PREDICTED: RNA polymerase II transcription f...    99   9e-22
ref|XP_015080104.1| PREDICTED: general transcription factor IIH ...    98   1e-21
ref|XP_006347459.1| PREDICTED: general transcription factor IIH ...    98   1e-21
ref|XP_004241513.1| PREDICTED: RNA polymerase II transcription f...    98   1e-21
ref|XP_019154406.1| PREDICTED: RNA polymerase II transcription f...    97   4e-21
gb|PHT46298.1| hypothetical protein CQW23_15456 [Capsicum baccatum]    94   3e-20
ref|XP_016578296.1| PREDICTED: RNA polymerase II transcription f...    94   3e-20
ref|XP_016578295.1| PREDICTED: RNA polymerase II transcription f...    94   4e-20

>ref|XP_012829347.1| PREDICTED: general transcription factor IIH subunit 3 [Erythranthe
           guttata]
 gb|EYU17663.1| hypothetical protein MIMGU_mgv1a011002mg [Erythranthe guttata]
          Length = 295

 Score =  127 bits (318), Expect = 1e-32
 Identities = 63/89 (70%), Positives = 68/89 (76%)
 Frame = +2

Query: 221 MTPVSSKLYTDDVSLLMVLIDTNPFFWNSVKSTIPFFKFLSHVLAFXXXXXXXXXXXXXX 400
           MTPVSSKLYTDDVSLL+VLIDTNPFFWNSVKS +PF KF+SHVLAF              
Sbjct: 1   MTPVSSKLYTDDVSLLVVLIDTNPFFWNSVKSNLPFSKFISHVLAFLNSILLVNQQNQVV 60

Query: 401 XXATGHSYCDYVFDSSASQSQNLRAEHLL 487
             ATGH+ CDYVFDSS +QSQN RAEHLL
Sbjct: 61  VLATGHNSCDYVFDSSVAQSQNQRAEHLL 89


>ref|XP_011101336.1| RNA polymerase II transcription factor B subunit 4 [Sesamum
           indicum]
 ref|XP_011101337.1| RNA polymerase II transcription factor B subunit 4 [Sesamum
           indicum]
          Length = 292

 Score =  120 bits (301), Expect = 3e-30
 Identities = 60/89 (67%), Positives = 65/89 (73%)
 Frame = +2

Query: 221 MTPVSSKLYTDDVSLLMVLIDTNPFFWNSVKSTIPFFKFLSHVLAFXXXXXXXXXXXXXX 400
           MTPVS KLYTDDVSLLMVLIDTNPFFWNSVKS +PF KFLSHVLAF              
Sbjct: 1   MTPVSVKLYTDDVSLLMVLIDTNPFFWNSVKSALPFSKFLSHVLAFLNAIVLLNQLNQVV 60

Query: 401 XXATGHSYCDYVFDSSASQSQNLRAEHLL 487
             ATG++ CDY+FDSS S+ Q  RAEHLL
Sbjct: 61  VIATGYNSCDYIFDSSTSEGQTQRAEHLL 89


>ref|XP_016441298.1| PREDICTED: RNA polymerase II transcription factor B subunit 4-like
           isoform X3 [Nicotiana tabacum]
          Length = 218

 Score =  102 bits (253), Expect = 8e-24
 Identities = 57/90 (63%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
 Frame = +2

Query: 221 MTPVSSKLYTDDVSLLMVLIDTNPFFWNSVKST-IPFFKFLSHVLAFXXXXXXXXXXXXX 397
           MTPVSSKLYTDDVSLLMVLIDTNP+FW+S+K+T   F KFLSHVLAF             
Sbjct: 1   MTPVSSKLYTDDVSLLMVLIDTNPYFWSSMKNTAFTFSKFLSHVLAFLNSILLLNQMNQV 60

Query: 398 XXXATGHSYCDYVFDSSASQSQNLRAEHLL 487
              ATG++ CDYVFDSS+S  Q  RAE LL
Sbjct: 61  VVIATGYNSCDYVFDSSSSSMQ--RAECLL 88


>ref|XP_016441297.1| PREDICTED: RNA polymerase II transcription factor B subunit 4-like
           isoform X2 [Nicotiana tabacum]
          Length = 220

 Score =  102 bits (253), Expect = 9e-24
 Identities = 57/90 (63%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
 Frame = +2

Query: 221 MTPVSSKLYTDDVSLLMVLIDTNPFFWNSVKST-IPFFKFLSHVLAFXXXXXXXXXXXXX 397
           MTPVSSKLYTDDVSLLMVLIDTNP+FW+S+K+T   F KFLSHVLAF             
Sbjct: 1   MTPVSSKLYTDDVSLLMVLIDTNPYFWSSMKNTAFTFSKFLSHVLAFLNSILLLNQMNQV 60

Query: 398 XXXATGHSYCDYVFDSSASQSQNLRAEHLL 487
              ATG++ CDYVFDSS+S  Q  RAE LL
Sbjct: 61  VVIATGYNSCDYVFDSSSSSMQ--RAECLL 88


>ref|XP_016441296.1| PREDICTED: RNA polymerase II transcription factor B subunit 4-like
           isoform X1 [Nicotiana tabacum]
          Length = 243

 Score =  102 bits (253), Expect = 1e-23
 Identities = 57/90 (63%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
 Frame = +2

Query: 221 MTPVSSKLYTDDVSLLMVLIDTNPFFWNSVKST-IPFFKFLSHVLAFXXXXXXXXXXXXX 397
           MTPVSSKLYTDDVSLLMVLIDTNP+FW+S+K+T   F KFLSHVLAF             
Sbjct: 1   MTPVSSKLYTDDVSLLMVLIDTNPYFWSSMKNTAFTFSKFLSHVLAFLNSILLLNQMNQV 60

Query: 398 XXXATGHSYCDYVFDSSASQSQNLRAEHLL 487
              ATG++ CDYVFDSS+S  Q  RAE LL
Sbjct: 61  VVIATGYNSCDYVFDSSSSSMQ--RAECLL 88


>ref|XP_019250007.1| PREDICTED: RNA polymerase II transcription factor B subunit 4-like
           isoform X1 [Nicotiana attenuata]
 gb|OIT08372.1| rna polymerase ii transcription factor b subunit 4 [Nicotiana
           attenuata]
          Length = 291

 Score =  102 bits (253), Expect = 4e-23
 Identities = 57/90 (63%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
 Frame = +2

Query: 221 MTPVSSKLYTDDVSLLMVLIDTNPFFWNSVKST-IPFFKFLSHVLAFXXXXXXXXXXXXX 397
           MTPVSSKLYTDDVSLLMVLIDTNP+FW+S+K+T   F KFLSHVLAF             
Sbjct: 1   MTPVSSKLYTDDVSLLMVLIDTNPYFWSSMKNTAFTFSKFLSHVLAFLNSLLLLNQMNQV 60

Query: 398 XXXATGHSYCDYVFDSSASQSQNLRAEHLL 487
              ATG++ CDYVFDSS+S  Q  RAE LL
Sbjct: 61  VVIATGYNSCDYVFDSSSSSMQ--RAECLL 88


>ref|XP_019247851.1| PREDICTED: RNA polymerase II transcription factor B subunit 4-like
           isoform X2 [Nicotiana attenuata]
 gb|OIT02542.1| rna polymerase ii transcription factor b subunit 4 [Nicotiana
           attenuata]
          Length = 291

 Score =  102 bits (253), Expect = 4e-23
 Identities = 57/90 (63%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
 Frame = +2

Query: 221 MTPVSSKLYTDDVSLLMVLIDTNPFFWNSVKST-IPFFKFLSHVLAFXXXXXXXXXXXXX 397
           MTPVSSKLYTDDVSLLMVLIDTNP+FW+S+K+T   F KFLSHVLAF             
Sbjct: 1   MTPVSSKLYTDDVSLLMVLIDTNPYFWSSMKNTAFTFSKFLSHVLAFLNSILLLNQMNQV 60

Query: 398 XXXATGHSYCDYVFDSSASQSQNLRAEHLL 487
              ATG++ CDYVFDSS+S  Q  RAE LL
Sbjct: 61  VVIATGYNSCDYVFDSSSSSMQ--RAECLL 88


>ref|XP_019247850.1| PREDICTED: RNA polymerase II transcription factor B subunit 4-like
           isoform X1 [Nicotiana attenuata]
          Length = 292

 Score =  102 bits (253), Expect = 4e-23
 Identities = 57/90 (63%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
 Frame = +2

Query: 221 MTPVSSKLYTDDVSLLMVLIDTNPFFWNSVKST-IPFFKFLSHVLAFXXXXXXXXXXXXX 397
           MTPVSSKLYTDDVSLLMVLIDTNP+FW+S+K+T   F KFLSHVLAF             
Sbjct: 1   MTPVSSKLYTDDVSLLMVLIDTNPYFWSSMKNTAFTFSKFLSHVLAFLNSILLLNQMNQV 60

Query: 398 XXXATGHSYCDYVFDSSASQSQNLRAEHLL 487
              ATG++ CDYVFDSS+S  Q  RAE LL
Sbjct: 61  VVIATGYNSCDYVFDSSSSSMQ--RAECLL 88


>ref|XP_022895217.1| RNA polymerase II transcription factor B subunit 4 [Olea europaea
           var. sylvestris]
          Length = 292

 Score =  101 bits (252), Expect = 5e-23
 Identities = 49/89 (55%), Positives = 61/89 (68%)
 Frame = +2

Query: 221 MTPVSSKLYTDDVSLLMVLIDTNPFFWNSVKSTIPFFKFLSHVLAFXXXXXXXXXXXXXX 400
           M P +SKLY DDVSLLMVLIDTNPFFWNS+ +++ F KF+S+VLAF              
Sbjct: 1   MAPAASKLYADDVSLLMVLIDTNPFFWNSINTSLSFSKFISNVLAFLNSILLLNQLNQVV 60

Query: 401 XXATGHSYCDYVFDSSASQSQNLRAEHLL 487
             ATG++ CDY+FDSSA Q+ N + E LL
Sbjct: 61  VIATGYNSCDYIFDSSALQNHNQKGESLL 89


>ref|XP_009776618.1| PREDICTED: general transcription factor IIH subunit 3 [Nicotiana
           sylvestris]
 ref|XP_016486790.1| PREDICTED: RNA polymerase II transcription factor B subunit 4-like
           [Nicotiana tabacum]
          Length = 291

 Score = 99.8 bits (247), Expect = 3e-22
 Identities = 56/90 (62%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
 Frame = +2

Query: 221 MTPVSSKLYTDDVSLLMVLIDTNPFFWNSVKST-IPFFKFLSHVLAFXXXXXXXXXXXXX 397
           MTPVSSKLYTDDVSLLMVLIDTNP+ W+S+K+T   F KFLSHVLAF             
Sbjct: 1   MTPVSSKLYTDDVSLLMVLIDTNPYLWSSMKNTAFTFSKFLSHVLAFLNSILLLNQMNQV 60

Query: 398 XXXATGHSYCDYVFDSSASQSQNLRAEHLL 487
              ATG++ CDYVFDSS+S  Q  RAE LL
Sbjct: 61  VVIATGYNSCDYVFDSSSSSMQ--RAECLL 88


>ref|XP_009626298.1| PREDICTED: RNA polymerase II transcription factor B subunit 4
           [Nicotiana tomentosiformis]
 ref|XP_018633374.1| PREDICTED: RNA polymerase II transcription factor B subunit 4
           [Nicotiana tomentosiformis]
          Length = 288

 Score = 99.4 bits (246), Expect = 4e-22
 Identities = 56/90 (62%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
 Frame = +2

Query: 221 MTPVSSKLYTDDVSLLMVLIDTNPFFWNSVKST-IPFFKFLSHVLAFXXXXXXXXXXXXX 397
           MTPVSSKLYTDDVSLLMVLIDTNP+FW+S+K+T   F KFLSHVLAF             
Sbjct: 1   MTPVSSKLYTDDVSLLMVLIDTNPYFWSSMKNTAFTFSKFLSHVLAFLNSILLLNQMNQV 60

Query: 398 XXXATGHSYCDYVFDSSASQSQNLRAEHLL 487
              ATG+  CDYVFDSS+S     RAE LL
Sbjct: 61  VVIATGYHSCDYVFDSSSSMQ---RAECLL 87


>ref|XP_016507557.1| PREDICTED: RNA polymerase II transcription factor B subunit 4-like
           isoform X2 [Nicotiana tabacum]
          Length = 290

 Score = 99.4 bits (246), Expect = 4e-22
 Identities = 56/90 (62%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
 Frame = +2

Query: 221 MTPVSSKLYTDDVSLLMVLIDTNPFFWNSVKST-IPFFKFLSHVLAFXXXXXXXXXXXXX 397
           MTPVSSKLYTDDVSLLMVLIDTNP+FW+S+K+T   F KFLSHVLAF             
Sbjct: 1   MTPVSSKLYTDDVSLLMVLIDTNPYFWSSMKNTAFTFSKFLSHVLAFLNSILLLNQMNQV 60

Query: 398 XXXATGHSYCDYVFDSSASQSQNLRAEHLL 487
              ATG+  CDYVFDSS+S     RAE LL
Sbjct: 61  VVIATGYHSCDYVFDSSSSMQ---RAECLL 87


>ref|XP_016507556.1| PREDICTED: RNA polymerase II transcription factor B subunit 4-like
           isoform X1 [Nicotiana tabacum]
          Length = 347

 Score = 99.4 bits (246), Expect = 9e-22
 Identities = 56/90 (62%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
 Frame = +2

Query: 221 MTPVSSKLYTDDVSLLMVLIDTNPFFWNSVKST-IPFFKFLSHVLAFXXXXXXXXXXXXX 397
           MTPVSSKLYTDDVSLLMVLIDTNP+FW+S+K+T   F KFLSHVLAF             
Sbjct: 1   MTPVSSKLYTDDVSLLMVLIDTNPYFWSSMKNTAFTFSKFLSHVLAFLNSILLLNQMNQV 60

Query: 398 XXXATGHSYCDYVFDSSASQSQNLRAEHLL 487
              ATG+  CDYVFDSS+S     RAE LL
Sbjct: 61  VVIATGYHSCDYVFDSSSSMQ---RAECLL 87


>ref|XP_015080104.1| PREDICTED: general transcription factor IIH subunit 3 [Solanum
           pennellii]
          Length = 290

 Score = 97.8 bits (242), Expect = 1e-21
 Identities = 54/90 (60%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
 Frame = +2

Query: 221 MTPVSSKLYTDDVSLLMVLIDTNPFFWNSVKST-IPFFKFLSHVLAFXXXXXXXXXXXXX 397
           MTPVSSKLY DDVSLLMVL+DTNP+FW+S+K+T   F KF+SHVLAF             
Sbjct: 1   MTPVSSKLYADDVSLLMVLVDTNPYFWSSMKNTAFTFPKFISHVLAFLNSILLLNQMNQV 60

Query: 398 XXXATGHSYCDYVFDSSASQSQNLRAEHLL 487
              ATG++ CDYVFDSS S  Q  RAE LL
Sbjct: 61  VVIATGYNSCDYVFDSSTSSMQ--RAECLL 88


>ref|XP_006347459.1| PREDICTED: general transcription factor IIH subunit 3 [Solanum
           tuberosum]
          Length = 290

 Score = 97.8 bits (242), Expect = 1e-21
 Identities = 54/90 (60%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
 Frame = +2

Query: 221 MTPVSSKLYTDDVSLLMVLIDTNPFFWNSVKST-IPFFKFLSHVLAFXXXXXXXXXXXXX 397
           MTPVSSKLY DDVSLLMVL+DTNP+FW+S+K+T   F KF+SHVLAF             
Sbjct: 1   MTPVSSKLYADDVSLLMVLVDTNPYFWSSMKNTAFTFPKFISHVLAFLNSILLLNQMNQV 60

Query: 398 XXXATGHSYCDYVFDSSASQSQNLRAEHLL 487
              ATG++ CDYVFDSS S  Q  RAE LL
Sbjct: 61  VVIATGYNSCDYVFDSSTSSMQ--RAECLL 88


>ref|XP_004241513.1| PREDICTED: RNA polymerase II transcription factor B subunit 4
           [Solanum lycopersicum]
          Length = 290

 Score = 97.8 bits (242), Expect = 1e-21
 Identities = 54/90 (60%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
 Frame = +2

Query: 221 MTPVSSKLYTDDVSLLMVLIDTNPFFWNSVKST-IPFFKFLSHVLAFXXXXXXXXXXXXX 397
           MTPVSSKLY DDVSLLMVL+DTNP+FW+S+K+T   F KF+SHVLAF             
Sbjct: 1   MTPVSSKLYADDVSLLMVLVDTNPYFWSSMKNTAFTFPKFISHVLAFLNSILLLNQMNQV 60

Query: 398 XXXATGHSYCDYVFDSSASQSQNLRAEHLL 487
              ATG++ CDYVFDSS S  Q  RAE LL
Sbjct: 61  VVIATGYNSCDYVFDSSTSSMQ--RAECLL 88


>ref|XP_019154406.1| PREDICTED: RNA polymerase II transcription factor B subunit 4
           [Ipomoea nil]
          Length = 282

 Score = 96.7 bits (239), Expect = 4e-21
 Identities = 52/91 (57%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
 Frame = +2

Query: 221 MTPVSSKLYTDDVSLLMVLIDTNPFFWNSVKS--TIPFFKFLSHVLAFXXXXXXXXXXXX 394
           M P SSKLYTDDVSLLMVLIDTNPFFW+S+K+  +  F KFLSHV++F            
Sbjct: 1   MAPASSKLYTDDVSLLMVLIDTNPFFWSSMKNNDSFTFSKFLSHVISFLNSILLLSQLNQ 60

Query: 395 XXXXATGHSYCDYVFDSSASQSQNLRAEHLL 487
               ATGH+ CDY+FDS  S S N RAE +L
Sbjct: 61  VVVIATGHNSCDYIFDS--SDSSNQRAECML 89


>gb|PHT46298.1| hypothetical protein CQW23_15456 [Capsicum baccatum]
          Length = 286

 Score = 94.4 bits (233), Expect = 3e-20
 Identities = 53/91 (58%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
 Frame = +2

Query: 221 MTPVSSKLYTDDVSLLMVLIDTNPFFWNSV--KSTIPFFKFLSHVLAFXXXXXXXXXXXX 394
           MTPVSSKLY DDVSLLMVLIDTNP+FW+S+   ++  F KFLSHVLAF            
Sbjct: 1   MTPVSSKLYADDVSLLMVLIDTNPYFWSSMNNNTSFTFSKFLSHVLAFLNSILLLNQMNQ 60

Query: 395 XXXXATGHSYCDYVFDSSASQSQNLRAEHLL 487
               A+G++ CDYVFDSS S  Q  RAE LL
Sbjct: 61  VVVIASGYNSCDYVFDSSTSSMQ--RAECLL 89


>ref|XP_016578296.1| PREDICTED: RNA polymerase II transcription factor B subunit 4
           isoform X2 [Capsicum annuum]
 gb|PHT79714.1| hypothetical protein T459_17766 [Capsicum annuum]
          Length = 286

 Score = 94.4 bits (233), Expect = 3e-20
 Identities = 53/91 (58%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
 Frame = +2

Query: 221 MTPVSSKLYTDDVSLLMVLIDTNPFFWNSV--KSTIPFFKFLSHVLAFXXXXXXXXXXXX 394
           MTPVSSKLY DDVSLLMVLIDTNP+FW+S+   ++  F KFLSHVLAF            
Sbjct: 1   MTPVSSKLYADDVSLLMVLIDTNPYFWSSMNNNTSFTFSKFLSHVLAFLNSILLLNQMNQ 60

Query: 395 XXXXATGHSYCDYVFDSSASQSQNLRAEHLL 487
               A+G++ CDYVFDSS S  Q  RAE LL
Sbjct: 61  VVVIASGYNSCDYVFDSSTSSMQ--RAECLL 89


>ref|XP_016578295.1| PREDICTED: RNA polymerase II transcription factor B subunit 4
           isoform X1 [Capsicum annuum]
          Length = 314

 Score = 94.4 bits (233), Expect = 4e-20
 Identities = 53/91 (58%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
 Frame = +2

Query: 221 MTPVSSKLYTDDVSLLMVLIDTNPFFWNSV--KSTIPFFKFLSHVLAFXXXXXXXXXXXX 394
           MTPVSSKLY DDVSLLMVLIDTNP+FW+S+   ++  F KFLSHVLAF            
Sbjct: 1   MTPVSSKLYADDVSLLMVLIDTNPYFWSSMNNNTSFTFSKFLSHVLAFLNSILLLNQMNQ 60

Query: 395 XXXXATGHSYCDYVFDSSASQSQNLRAEHLL 487
               A+G++ CDYVFDSS S  Q  RAE LL
Sbjct: 61  VVVIASGYNSCDYVFDSSTSSMQ--RAECLL 89