BLASTX nr result
ID: Rehmannia32_contig00017289
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia32_contig00017289
(478 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011089329.1| general transcription factor IIH subunit 2 [... 142 1e-37
gb|PIN00735.1| RNA polymerase II transcription initiation/nucleo... 135 8e-35
ref|XP_012827803.1| PREDICTED: general transcription factor IIH ... 134 2e-34
gb|KDP44095.1| hypothetical protein JCGZ_05562 [Jatropha curcas] 122 7e-32
ref|XP_010032024.1| PREDICTED: general transcription factor IIH ... 123 3e-30
ref|XP_012064858.1| general transcription factor IIH subunit 2 [... 122 4e-30
ref|XP_022026375.1| general transcription factor IIH subunit 2 [... 122 5e-30
gb|AIU50482.1| GTF2H2, partial [Erythranthe guttata] 119 7e-30
ref|XP_019259136.1| PREDICTED: general transcription factor IIH ... 121 8e-30
ref|XP_019164099.1| PREDICTED: general transcription factor IIH ... 121 9e-30
emb|CDP13112.1| unnamed protein product [Coffea canephora] 120 2e-29
emb|CAN82988.1| hypothetical protein VITISV_011714 [Vitis vinifera] 115 2e-29
ref|XP_015074195.1| PREDICTED: general transcription factor IIH ... 119 6e-29
ref|XP_006363938.1| PREDICTED: general transcription factor IIH ... 119 6e-29
ref|XP_004237420.1| PREDICTED: general transcription factor IIH ... 119 6e-29
ref|XP_021644940.1| general transcription factor IIH subunit 2-l... 119 9e-29
ref|XP_018819483.1| PREDICTED: general transcription factor IIH ... 119 1e-28
ref|XP_021644939.1| general transcription factor IIH subunit 2-l... 119 1e-28
ref|XP_009630848.1| PREDICTED: general transcription factor IIH ... 117 2e-28
ref|XP_006366483.1| PREDICTED: general transcription factor IIH ... 117 2e-28
>ref|XP_011089329.1| general transcription factor IIH subunit 2 [Sesamum indicum]
ref|XP_011089330.1| general transcription factor IIH subunit 2 [Sesamum indicum]
Length = 422
Score = 142 bits (358), Expect = 1e-37
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = +3
Query: 6 LPKNCFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSKTVG 185
LPKNCFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSK+V
Sbjct: 359 LPKNCFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSKSVS 418
Query: 186 SVEG 197
+ EG
Sbjct: 419 TAEG 422
>gb|PIN00735.1| RNA polymerase II transcription initiation/nucleotide excision
repair factor TFIIH, subunit SSL1 [Handroanthus
impetiginosus]
Length = 422
Score = 135 bits (339), Expect = 8e-35
Identities = 58/63 (92%), Positives = 59/63 (93%)
Frame = +3
Query: 6 LPKNCFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSKTVG 185
L KNCFGCQQSLLNPGNMPA CVSCPKCKQ+FCLDCDIYIHESLHNCPGCESFRHSK V
Sbjct: 359 LQKNCFGCQQSLLNPGNMPAPCVSCPKCKQHFCLDCDIYIHESLHNCPGCESFRHSKPVA 418
Query: 186 SVE 194
SVE
Sbjct: 419 SVE 421
>ref|XP_012827803.1| PREDICTED: general transcription factor IIH subunit 2 [Erythranthe
guttata]
ref|XP_012827804.1| PREDICTED: general transcription factor IIH subunit 2 [Erythranthe
guttata]
gb|EYU18861.1| hypothetical protein MIMGU_mgv1a007041mg [Erythranthe guttata]
Length = 422
Score = 134 bits (336), Expect = 2e-34
Identities = 57/65 (87%), Positives = 60/65 (92%)
Frame = +3
Query: 3 YLPKNCFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSKTV 182
YL KNCFGCQQ+LLNPGNMP S V CPKCKQYFCLDCDIYIHESLHNCPGCESFRHSK+
Sbjct: 358 YLAKNCFGCQQTLLNPGNMPGSRVCCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSKSN 417
Query: 183 GSVEG 197
G+VEG
Sbjct: 418 GTVEG 422
>gb|KDP44095.1| hypothetical protein JCGZ_05562 [Jatropha curcas]
Length = 208
Score = 122 bits (306), Expect = 7e-32
Identities = 49/56 (87%), Positives = 52/56 (92%)
Frame = +3
Query: 6 LPKNCFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHS 173
LPK CFGCQQ+L+NPGN P CV+CPKCKQYFCLDCDIYIHESLHNCPGCESFRHS
Sbjct: 153 LPKTCFGCQQNLVNPGNKPGPCVACPKCKQYFCLDCDIYIHESLHNCPGCESFRHS 208
>ref|XP_010032024.1| PREDICTED: general transcription factor IIH subunit 2 [Eucalyptus
grandis]
gb|KCW51408.1| hypothetical protein EUGRSUZ_J00945 [Eucalyptus grandis]
Length = 423
Score = 123 bits (308), Expect = 3e-30
Identities = 51/63 (80%), Positives = 56/63 (88%)
Frame = +3
Query: 6 LPKNCFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSKTVG 185
LPK+CFGCQQSLLNPGN P+ V CP+CKQ+FC+DCDIYIHESLHNCPGCESFRH KTV
Sbjct: 360 LPKSCFGCQQSLLNPGNRPSLSVECPRCKQFFCIDCDIYIHESLHNCPGCESFRHFKTVS 419
Query: 186 SVE 194
S E
Sbjct: 420 SSE 422
>ref|XP_012064858.1| general transcription factor IIH subunit 2 [Jatropha curcas]
Length = 415
Score = 122 bits (306), Expect = 4e-30
Identities = 49/56 (87%), Positives = 52/56 (92%)
Frame = +3
Query: 6 LPKNCFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHS 173
LPK CFGCQQ+L+NPGN P CV+CPKCKQYFCLDCDIYIHESLHNCPGCESFRHS
Sbjct: 360 LPKTCFGCQQNLVNPGNKPGPCVACPKCKQYFCLDCDIYIHESLHNCPGCESFRHS 415
>ref|XP_022026375.1| general transcription factor IIH subunit 2 [Helianthus annuus]
gb|OTG35355.1| putative general transcription factor II H2 [Helianthus annuus]
Length = 418
Score = 122 bits (306), Expect = 5e-30
Identities = 50/58 (86%), Positives = 54/58 (93%)
Frame = +3
Query: 9 PKNCFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSKTV 182
PK+CFGCQQSLLNPGNMP CV+CPKCKQ+FCLDCDIYIHESLHNCPGCES R SK+V
Sbjct: 360 PKSCFGCQQSLLNPGNMPVRCVTCPKCKQFFCLDCDIYIHESLHNCPGCESLRDSKSV 417
>gb|AIU50482.1| GTF2H2, partial [Erythranthe guttata]
Length = 305
Score = 119 bits (299), Expect = 7e-30
Identities = 50/55 (90%), Positives = 51/55 (92%)
Frame = +3
Query: 3 YLPKNCFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFR 167
YL KNCFGCQQ+LLNPGNMP S V CPKCKQYFCLDCDIYIHESLHNCPGCESFR
Sbjct: 251 YLAKNCFGCQQTLLNPGNMPGSRVCCPKCKQYFCLDCDIYIHESLHNCPGCESFR 305
>ref|XP_019259136.1| PREDICTED: general transcription factor IIH subunit 2 [Nicotiana
attenuata]
ref|XP_019259137.1| PREDICTED: general transcription factor IIH subunit 2 [Nicotiana
attenuata]
gb|OIT40041.1| general transcription factor iih subunit 2 [Nicotiana attenuata]
Length = 414
Score = 121 bits (304), Expect = 8e-30
Identities = 50/63 (79%), Positives = 56/63 (88%)
Frame = +3
Query: 6 LPKNCFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSKTVG 185
LPKNCFGCQQSLLNPGN+P V+CP CKQ+FCLDCDIYIHESLHNCPGCES R+SKT+
Sbjct: 352 LPKNCFGCQQSLLNPGNLPGLQVACPNCKQHFCLDCDIYIHESLHNCPGCESLRNSKTIS 411
Query: 186 SVE 194
+E
Sbjct: 412 DME 414
>ref|XP_019164099.1| PREDICTED: general transcription factor IIH subunit 2 isoform X1
[Ipomoea nil]
ref|XP_019164100.1| PREDICTED: general transcription factor IIH subunit 2 isoform X1
[Ipomoea nil]
ref|XP_019164101.1| PREDICTED: general transcription factor IIH subunit 2 isoform X1
[Ipomoea nil]
ref|XP_019164102.1| PREDICTED: general transcription factor IIH subunit 2 isoform X1
[Ipomoea nil]
ref|XP_019164103.1| PREDICTED: general transcription factor IIH subunit 2 isoform X1
[Ipomoea nil]
Length = 417
Score = 121 bits (304), Expect = 9e-30
Identities = 48/63 (76%), Positives = 59/63 (93%)
Frame = +3
Query: 6 LPKNCFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSKTVG 185
+PKNCFGC+QSLLNPGN+PA CV+CPKCKQ+FCLDC+IYIHESLHNCPGCESF+ S +V
Sbjct: 354 VPKNCFGCRQSLLNPGNIPAPCVACPKCKQHFCLDCEIYIHESLHNCPGCESFKSSASVS 413
Query: 186 SVE 194
+++
Sbjct: 414 NMQ 416
>emb|CDP13112.1| unnamed protein product [Coffea canephora]
Length = 424
Score = 120 bits (302), Expect = 2e-29
Identities = 49/63 (77%), Positives = 57/63 (90%)
Frame = +3
Query: 6 LPKNCFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSKTVG 185
LPK+CFGCQQSLLNPGN+P CV+CPKCKQ+FCLDCDIYIHESL NCPGCESF+ S +V
Sbjct: 361 LPKSCFGCQQSLLNPGNLPGPCVACPKCKQHFCLDCDIYIHESLQNCPGCESFKQSNSVT 420
Query: 186 SVE 194
++E
Sbjct: 421 NME 423
>emb|CAN82988.1| hypothetical protein VITISV_011714 [Vitis vinifera]
Length = 199
Score = 115 bits (289), Expect = 2e-29
Identities = 48/59 (81%), Positives = 51/59 (86%)
Frame = +3
Query: 18 CFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSKTVGSVE 194
CFGCQ+SLL PGN P CV+CPKCKQ+FCLDCDIYIHESLHNCPGCESFRHSK V E
Sbjct: 140 CFGCQESLLIPGNKPTLCVACPKCKQHFCLDCDIYIHESLHNCPGCESFRHSKIVSVTE 198
>ref|XP_015074195.1| PREDICTED: general transcription factor IIH subunit 2 [Solanum
pennellii]
Length = 414
Score = 119 bits (298), Expect = 6e-29
Identities = 49/63 (77%), Positives = 55/63 (87%)
Frame = +3
Query: 6 LPKNCFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSKTVG 185
LPKNCFGCQ SLLNPGN+P V+CP CKQ+FCLDCDIYIHESLHNCPGCES R+SKT+
Sbjct: 351 LPKNCFGCQLSLLNPGNLPGPQVACPNCKQHFCLDCDIYIHESLHNCPGCESLRNSKTIS 410
Query: 186 SVE 194
+E
Sbjct: 411 DME 413
>ref|XP_006363938.1| PREDICTED: general transcription factor IIH subunit 2-like isoform
X2 [Solanum tuberosum]
Length = 414
Score = 119 bits (298), Expect = 6e-29
Identities = 49/63 (77%), Positives = 55/63 (87%)
Frame = +3
Query: 6 LPKNCFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSKTVG 185
LPKNCFGCQ SLLNPGN+P V+CP CKQ+FCLDCDIYIHESLHNCPGCES R+SKT+
Sbjct: 351 LPKNCFGCQLSLLNPGNLPGPQVACPNCKQHFCLDCDIYIHESLHNCPGCESLRNSKTIS 410
Query: 186 SVE 194
+E
Sbjct: 411 DME 413
>ref|XP_004237420.1| PREDICTED: general transcription factor IIH subunit 2 isoform X1
[Solanum lycopersicum]
Length = 414
Score = 119 bits (298), Expect = 6e-29
Identities = 49/63 (77%), Positives = 55/63 (87%)
Frame = +3
Query: 6 LPKNCFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSKTVG 185
LPKNCFGCQ SLLNPGN+P V+CP CKQ+FCLDCDIYIHESLHNCPGCES R+SKT+
Sbjct: 351 LPKNCFGCQLSLLNPGNLPGPQVACPNCKQHFCLDCDIYIHESLHNCPGCESLRNSKTIS 410
Query: 186 SVE 194
+E
Sbjct: 411 DME 413
>ref|XP_021644940.1| general transcription factor IIH subunit 2-like isoform X2 [Hevea
brasiliensis]
Length = 413
Score = 119 bits (297), Expect = 9e-29
Identities = 47/55 (85%), Positives = 51/55 (92%)
Frame = +3
Query: 9 PKNCFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHS 173
PK CFGCQQSLLNPGN P+ CV+CPKCKQYFC+DCDIYIHESLHNCPGC+S RHS
Sbjct: 359 PKTCFGCQQSLLNPGNKPSLCVACPKCKQYFCIDCDIYIHESLHNCPGCDSIRHS 413
>ref|XP_018819483.1| PREDICTED: general transcription factor IIH subunit 2 [Juglans
regia]
Length = 423
Score = 119 bits (297), Expect = 1e-28
Identities = 49/57 (85%), Positives = 53/57 (92%)
Frame = +3
Query: 9 PKNCFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSKT 179
P++CFGCQQSLLNPGN P VSCPKCKQ+FCLDCDIYIHESLHNCPGCESFRHSK+
Sbjct: 361 PRSCFGCQQSLLNPGNKPGLRVSCPKCKQHFCLDCDIYIHESLHNCPGCESFRHSKS 417
>ref|XP_021644939.1| general transcription factor IIH subunit 2-like isoform X1 [Hevea
brasiliensis]
Length = 455
Score = 119 bits (297), Expect = 1e-28
Identities = 47/55 (85%), Positives = 51/55 (92%)
Frame = +3
Query: 9 PKNCFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHS 173
PK CFGCQQSLLNPGN P+ CV+CPKCKQYFC+DCDIYIHESLHNCPGC+S RHS
Sbjct: 401 PKTCFGCQQSLLNPGNKPSLCVACPKCKQYFCIDCDIYIHESLHNCPGCDSIRHS 455
>ref|XP_009630848.1| PREDICTED: general transcription factor IIH subunit 2 [Nicotiana
tomentosiformis]
ref|XP_018621905.1| PREDICTED: general transcription factor IIH subunit 2 [Nicotiana
tomentosiformis]
ref|XP_018621906.1| PREDICTED: general transcription factor IIH subunit 2 [Nicotiana
tomentosiformis]
Length = 415
Score = 117 bits (294), Expect = 2e-28
Identities = 48/62 (77%), Positives = 54/62 (87%)
Frame = +3
Query: 6 LPKNCFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSKTVG 185
LPKNCFGCQQSLLNPGN+P V+CP CK +FCLDCDIYIHESLHNCPGCES R+SKT+
Sbjct: 352 LPKNCFGCQQSLLNPGNLPGLQVACPNCKHHFCLDCDIYIHESLHNCPGCESLRNSKTIS 411
Query: 186 SV 191
+
Sbjct: 412 DM 413
>ref|XP_006366483.1| PREDICTED: general transcription factor IIH subunit 2-like [Solanum
tuberosum]
Length = 418
Score = 117 bits (294), Expect = 2e-28
Identities = 48/63 (76%), Positives = 54/63 (85%)
Frame = +3
Query: 6 LPKNCFGCQQSLLNPGNMPASCVSCPKCKQYFCLDCDIYIHESLHNCPGCESFRHSKTVG 185
LPKNCFGCQ S LNPGN+P V+CP CKQ+FCLDCDIYIHESLHNCPGCES R+SKT+
Sbjct: 355 LPKNCFGCQLSFLNPGNLPGPQVACPNCKQHFCLDCDIYIHESLHNCPGCESLRNSKTIS 414
Query: 186 SVE 194
+E
Sbjct: 415 DME 417