BLASTX nr result

ID: Rehmannia32_contig00017111 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00017111
         (1148 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012568789.1| PREDICTED: uncharacterized protein LOC101505...    96   6e-20

>ref|XP_012568789.1| PREDICTED: uncharacterized protein LOC101505739 [Cicer arietinum]
 ref|XP_012568790.1| PREDICTED: uncharacterized protein LOC101505739 [Cicer arietinum]
          Length = 176

 Score = 96.3 bits (238), Expect = 6e-20
 Identities = 52/109 (47%), Positives = 71/109 (65%), Gaps = 2/109 (1%)
 Frame = +3

Query: 3   RHFQKVGRGDCSKILVGGLITPIA--LHFEHDLTDLQQARGSNRIDLEVCTAIKLIERIN 176
           R F KV +     I++GGLITPIA  L + +D+  L Q +G  RIDL+ C A+KLI +++
Sbjct: 40  RQFDKVAKASKGDIVIGGLITPIAISLGYTNDIFKLSQVQGHTRIDLDSCIAMKLITKLH 99

Query: 177 DQFCLLFRHTSQRLLLPDPARTTIRNRDNWLMGMRHNPEDDRIRLELPP 323
           D + LL  H    + LP+PARTTI+NRDNWL+    N  DD+  L+LPP
Sbjct: 100 DTYHLLL-HDGSAIALPNPARTTIQNRDNWLLS-GDNSGDDQPLLQLPP 146


Top