BLASTX nr result
ID: Rehmannia32_contig00017088
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia32_contig00017088
(569 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011089910.1| double-stranded RNA-binding protein 2 [Sesam... 90 8e-18
gb|PIN15051.1| hypothetical protein CDL12_12314 [Handroanthus im... 86 2e-16
ref|XP_019166589.1| PREDICTED: double-stranded RNA-binding prote... 77 2e-13
emb|CAN80689.1| hypothetical protein VITISV_005501 [Vitis vinifera] 72 2e-11
ref|XP_002285171.1| PREDICTED: double-stranded RNA-binding prote... 72 2e-11
ref|XP_022874160.1| double-stranded RNA-binding protein 2 [Olea ... 69 2e-10
gb|OVA10136.1| Double-stranded RNA-binding domain [Macleaya cord... 69 4e-10
ref|XP_024158341.1| double-stranded RNA-binding protein 2 [Rosa ... 68 5e-10
ref|XP_008359745.1| PREDICTED: double-stranded RNA-binding prote... 67 6e-10
ref|XP_009367071.1| PREDICTED: double-stranded RNA-binding prote... 68 7e-10
ref|XP_021887035.1| double-stranded RNA-binding protein 2 [Caric... 68 7e-10
ref|XP_023926857.1| double-stranded RNA-binding protein 2 [Querc... 67 9e-10
gb|POE92584.1| double-stranded rna-binding protein 2 [Quercus su... 67 9e-10
ref|XP_004291574.1| PREDICTED: double-stranded RNA-binding prote... 67 1e-09
ref|XP_008385320.1| PREDICTED: double-stranded RNA-binding prote... 67 1e-09
ref|XP_010253679.1| PREDICTED: double-stranded RNA-binding prote... 67 1e-09
gb|PKI63849.1| hypothetical protein CRG98_015732 [Punica granatum] 65 1e-09
ref|XP_017641881.1| PREDICTED: double-stranded RNA-binding prote... 67 2e-09
gb|KHG19746.1| Double-stranded RNA-binding protein 2 [Gossypium ... 67 2e-09
gb|KHG19747.1| Double-stranded RNA-binding protein 2 [Gossypium ... 67 2e-09
>ref|XP_011089910.1| double-stranded RNA-binding protein 2 [Sesamum indicum]
Length = 390
Score = 90.1 bits (222), Expect = 8e-18
Identities = 57/121 (47%), Positives = 63/121 (52%), Gaps = 27/121 (22%)
Frame = -1
Query: 524 RFPAAGAAPYVPFRQCRTSYQGIAPPVIIRTAVPVFS-----------XXXXXXXXXXXX 378
RFPA GAAPYVP CR YQG APPV IRT+VPVFS
Sbjct: 271 RFPAVGAAPYVPMSHCRKPYQGNAPPVTIRTSVPVFSAPPLPSPTTRPAQAMPPRPVQVA 330
Query: 377 XXVCIRQTVPAF----------------TAPLEKLSGEAEEILTCDVDESTAIRCLEQLE 246
VCIRQ VP F +AP +KLS EAEE T + DEST ++CLEQLE
Sbjct: 331 PPVCIRQAVPVFAAPPAPKEDQPSVSASSAPSKKLSAEAEETAT-EADESTVVKCLEQLE 389
Query: 245 M 243
M
Sbjct: 390 M 390
>gb|PIN15051.1| hypothetical protein CDL12_12314 [Handroanthus impetiginosus]
Length = 374
Score = 86.3 bits (212), Expect = 2e-16
Identities = 58/129 (44%), Positives = 67/129 (51%), Gaps = 22/129 (17%)
Frame = -1
Query: 563 NNSQTRTTTTHVQRFPAAGAAPYVPFRQCRTSYQGIAPPVIIRTAVPVFS-------XXX 405
N S TT QRFPA GAAPYVP RQC YQGIAPPV +RT VPVFS
Sbjct: 249 NPSSQEIKTTQGQRFPAVGAAPYVPMRQC---YQGIAPPVTMRTQVPVFSAPPAPRPARM 305
Query: 404 XXXXXXXXXXXVCIRQTVPAFTAP---------LEKLSGEAEEIL------TCDVDESTA 270
V IRQ +PAF AP S ++E+L DVDESTA
Sbjct: 306 MHPQAVRAAPPVSIRQVIPAFAAPSGLRDNPTSATSSSTPSKELLDEDDGSLVDVDESTA 365
Query: 269 IRCLEQLEM 243
++C+EQLE+
Sbjct: 366 VKCVEQLEI 374
>ref|XP_019166589.1| PREDICTED: double-stranded RNA-binding protein 2-like [Ipomoea nil]
Length = 365
Score = 77.4 bits (189), Expect = 2e-13
Identities = 54/127 (42%), Positives = 64/127 (50%), Gaps = 21/127 (16%)
Frame = -1
Query: 560 NSQTRTTTTHVQRFPAAGAAPYVPFRQCRTSY-QGIAPPVIIRTAVPVFS--------XX 408
+S T T +H + A GAAPY P RQ RT Y +GIAPPV +RTAVPVFS
Sbjct: 241 SSSTATGDSHA--YSAPGAAPYPPARQYRTPYHRGIAPPVTVRTAVPVFSAPPAPAHPSQ 298
Query: 407 XXXXXXXXXXXXVCIRQTVPAFTAP------------LEKLSGEAEEILTCDVDESTAIR 264
VCIRQ VP F AP L K + +VDESTA+R
Sbjct: 299 MVRAQPVRVAPPVCIRQAVPVFAAPTPTKEAVANTAHLSKTEETTNKSECIEVDESTALR 358
Query: 263 CLEQLEM 243
CLEQL++
Sbjct: 359 CLEQLQI 365
>emb|CAN80689.1| hypothetical protein VITISV_005501 [Vitis vinifera]
Length = 403
Score = 72.4 bits (176), Expect = 2e-11
Identities = 40/72 (55%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Frame = -1
Query: 527 QRFPAAGAAPYVPFRQCRTSYQGIAPPVIIRTAVPVFS-------XXXXXXXXXXXXXXV 369
QRFPAAGA PYVP RQ RT Y GIAPPV IR AVPVFS V
Sbjct: 276 QRFPAAGAVPYVPIRQFRTPYHGIAPPVTIRNAVPVFSAPPSGLPPQVIRAPHMRIAPPV 335
Query: 368 CIRQTVPAFTAP 333
C+RQ VP F AP
Sbjct: 336 CVRQAVPVFAAP 347
>ref|XP_002285171.1| PREDICTED: double-stranded RNA-binding protein 2 [Vitis vinifera]
Length = 413
Score = 72.4 bits (176), Expect = 2e-11
Identities = 40/72 (55%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Frame = -1
Query: 527 QRFPAAGAAPYVPFRQCRTSYQGIAPPVIIRTAVPVFS-------XXXXXXXXXXXXXXV 369
QRFPAAGA PYVP RQ RT Y GIAPPV IR AVPVFS V
Sbjct: 286 QRFPAAGAVPYVPIRQFRTPYHGIAPPVTIRNAVPVFSAPPSGLPPQVIRAPHMRIAPPV 345
Query: 368 CIRQTVPAFTAP 333
C+RQ VP F AP
Sbjct: 346 CVRQAVPVFAAP 357
>ref|XP_022874160.1| double-stranded RNA-binding protein 2 [Olea europaea var.
sylvestris]
Length = 311
Score = 68.9 bits (167), Expect = 2e-10
Identities = 47/112 (41%), Positives = 55/112 (49%), Gaps = 26/112 (23%)
Frame = -1
Query: 500 PYVPFRQCRTSYQGIAPPVIIRTAVPVFS-------XXXXXXXXXXXXXXVCIRQTVPAF 342
PY+P RQCR YQGIAP V IR +VPVFS VC+RQ VP F
Sbjct: 200 PYLPVRQCRAPYQGIAPAVTIRNSVPVFSAPPRPPPSHPIQRQPIRVSPPVCVRQVVPVF 259
Query: 341 T----------------APLEKLSGEAEEIL---TCDVDESTAIRCLEQLEM 243
AP K EAEE + T VDESTA++CLEQL++
Sbjct: 260 AAASVHKEIPPPPPTTCAPPNKRPLEAEETVKNCTDGVDESTAVKCLEQLKI 311
>gb|OVA10136.1| Double-stranded RNA-binding domain [Macleaya cordata]
Length = 447
Score = 68.6 bits (166), Expect = 4e-10
Identities = 38/76 (50%), Positives = 41/76 (53%), Gaps = 11/76 (14%)
Frame = -1
Query: 527 QRFPAAGAAPYVPFRQCRTSYQGIAPPVIIRTAVPVFS-----------XXXXXXXXXXX 381
Q+FPAAGAAPY+P R R Y G+APPV IRTAVPVFS
Sbjct: 266 QKFPAAGAAPYIPIRHFRPPYHGVAPPVTIRTAVPVFSAPPLPPPAHRPPPLMGPPPVHI 325
Query: 380 XXXVCIRQTVPAFTAP 333
VCIRQ VP F AP
Sbjct: 326 SPPVCIRQAVPVFAAP 341
>ref|XP_024158341.1| double-stranded RNA-binding protein 2 [Rosa chinensis]
gb|PRQ33542.1| putative double-stranded RNA-binding domain-containing protein
[Rosa chinensis]
Length = 411
Score = 68.2 bits (165), Expect = 5e-10
Identities = 39/88 (44%), Positives = 46/88 (52%), Gaps = 11/88 (12%)
Frame = -1
Query: 563 NNSQTRTTTTHVQRFPAAGAAPYVPFRQCRTSYQGIAPPVIIRTAVPVFSXXXXXXXXXX 384
++S + T QRFPAAGAAPYVP RQ RT +APPV IRT+VPVFS
Sbjct: 254 HSSPVESRWTRPQRFPAAGAAPYVPIRQMRTPCHRMAPPVTIRTSVPVFSAPPLPPPPGL 313
Query: 383 XXXXVCI-----------RQTVPAFTAP 333
+C+ RQ VP F AP
Sbjct: 314 HRQGMCVPPVRVAPPVTMRQAVPVFAAP 341
>ref|XP_008359745.1| PREDICTED: double-stranded RNA-binding protein 2-like [Malus
domestica]
Length = 266
Score = 67.0 bits (162), Expect = 6e-10
Identities = 35/54 (64%), Positives = 39/54 (72%), Gaps = 3/54 (5%)
Frame = -1
Query: 566 INNSQTRTTTTHV---QRFPAAGAAPYVPFRQCRTSYQGIAPPVIIRTAVPVFS 414
+ +SQ + + V QRFPAAGAAPYVP RQ RT GIAPPV IRTAVPVFS
Sbjct: 95 VTSSQASSIDSRVMRPQRFPAAGAAPYVPIRQLRTPCHGIAPPVTIRTAVPVFS 148
>ref|XP_009367071.1| PREDICTED: double-stranded RNA-binding protein 2 [Pyrus x
bretschneideri]
Length = 410
Score = 67.8 bits (164), Expect = 7e-10
Identities = 48/111 (43%), Positives = 60/111 (54%), Gaps = 11/111 (9%)
Frame = -1
Query: 566 INNSQTRTTTTHV---QRFPAAGAAPYVPFRQCRTSYQGIAPPVIIRTAVPVFS------ 414
+ +SQ + + V QRFPAAGAAPYVP RQ RT GIAPPV IRTAVPVFS
Sbjct: 250 VTSSQASSIDSRVMRPQRFPAAGAAPYVPIRQLRTPCHGIAPPVTIRTAVPVFSAPPHAM 309
Query: 413 -XXXXXXXXXXXXXXVCIRQTVPAF-TAPLEKLSGEAEEILTCDVDESTAI 267
V +RQ VP F ++P++K ++ LT +ES I
Sbjct: 310 PCQTMHIPPVRVAPPVTVRQAVPVFSSSPVKK-----DDPLTTRKEESPII 355
>ref|XP_021887035.1| double-stranded RNA-binding protein 2 [Carica papaya]
Length = 477
Score = 67.8 bits (164), Expect = 7e-10
Identities = 33/41 (80%), Positives = 34/41 (82%)
Frame = -1
Query: 536 THVQRFPAAGAAPYVPFRQCRTSYQGIAPPVIIRTAVPVFS 414
T Q+FPAAGAAPYVP RQ RTS GIAPPV IRTAVPVFS
Sbjct: 264 TRPQKFPAAGAAPYVPMRQYRTSCHGIAPPVTIRTAVPVFS 304
>ref|XP_023926857.1| double-stranded RNA-binding protein 2 [Quercus suber]
Length = 391
Score = 67.4 bits (163), Expect = 9e-10
Identities = 37/70 (52%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Frame = -1
Query: 527 QRFPAAGAAPYVPFRQCRTSYQGIAPPVIIRTAVPVFS-----XXXXXXXXXXXXXXVCI 363
Q+FPAAGAAPYVP RQ RT GIAPPV IRTAVPV+S + I
Sbjct: 266 QKFPAAGAAPYVPIRQFRTPCHGIAPPVTIRTAVPVYSAPPLPQPVMRAPPVRFAPPISI 325
Query: 362 RQTVPAFTAP 333
RQ +PA+ AP
Sbjct: 326 RQAIPAYAAP 335
>gb|POE92584.1| double-stranded rna-binding protein 2 [Quercus suber]
Length = 399
Score = 67.4 bits (163), Expect = 9e-10
Identities = 37/70 (52%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Frame = -1
Query: 527 QRFPAAGAAPYVPFRQCRTSYQGIAPPVIIRTAVPVFS-----XXXXXXXXXXXXXXVCI 363
Q+FPAAGAAPYVP RQ RT GIAPPV IRTAVPV+S + I
Sbjct: 266 QKFPAAGAAPYVPIRQFRTPCHGIAPPVTIRTAVPVYSAPPLPQPVMRAPPVRFAPPISI 325
Query: 362 RQTVPAFTAP 333
RQ +PA+ AP
Sbjct: 326 RQAIPAYAAP 335
>ref|XP_004291574.1| PREDICTED: double-stranded RNA-binding protein 2 [Fragaria vesca
subsp. vesca]
Length = 427
Score = 67.4 bits (163), Expect = 1e-09
Identities = 41/111 (36%), Positives = 56/111 (50%), Gaps = 12/111 (10%)
Frame = -1
Query: 563 NNSQTRTTTTHVQRFPAAGAAPYVPFRQCRTSYQGIAPPVIIRTAVPVFSXXXXXXXXXX 384
++S + T QRFPAAGA PYVP RQ RT +APPV IRT+VPVFS
Sbjct: 257 HSSPVESRWTRPQRFPAAGAVPYVPIRQMRTPCHRMAPPVTIRTSVPVFSAPPLPPPPGL 316
Query: 383 XXXXVCI-----------RQTVPAFTA-PLEKLSGEAEEILTCDVDESTAI 267
+C+ RQ VP F A P+ + + +++ T +ES +
Sbjct: 317 HRQTMCVPPIRVAPPVTMRQAVPVFAAPPVRRDDSKKDDLPTSRKEESPIV 367
>ref|XP_008385320.1| PREDICTED: double-stranded RNA-binding protein 2 [Malus domestica]
ref|XP_008349753.1| PREDICTED: double-stranded RNA-binding protein 2-like [Malus
domestica]
ref|XP_008366361.1| PREDICTED: LOW QUALITY PROTEIN: double-stranded RNA-binding protein
2-like [Malus domestica]
Length = 428
Score = 67.4 bits (163), Expect = 1e-09
Identities = 40/76 (52%), Positives = 42/76 (55%), Gaps = 11/76 (14%)
Frame = -1
Query: 527 QRFPAAGAAPYVPFRQCRTSYQGIAPPVIIRTAVPVFSXXXXXXXXXXXXXXVCI----- 363
QRFPAAGAAPYVP RQ RT GIAPPV IRTAVPVFS + I
Sbjct: 266 QRFPAAGAAPYVPIRQLRTPCHGIAPPVTIRTAVPVFSAPPLPPPHAMPCQTMRIPPLRV 325
Query: 362 ------RQTVPAFTAP 333
RQ VP F+AP
Sbjct: 326 APPVTMRQAVPVFSAP 341
>ref|XP_010253679.1| PREDICTED: double-stranded RNA-binding protein 2 [Nelumbo nucifera]
Length = 429
Score = 67.4 bits (163), Expect = 1e-09
Identities = 46/129 (35%), Positives = 55/129 (42%), Gaps = 34/129 (26%)
Frame = -1
Query: 527 QRFPAAGAAPYVPFRQCRTSYQGIAPPVIIRTAVPVFSXXXXXXXXXXXXXXVC------ 366
Q+FPAAGAAPY+PFR R Y GIAPPV IRTAVPVFS
Sbjct: 301 QKFPAAGAAPYIPFRHFRPPYHGIAPPVTIRTAVPVFSAPPLPPPSATSTRPSSVIGPPI 360
Query: 365 -------IRQTVPAFTAPLEKLSGEAEEILTC---------------------DVDESTA 270
IRQ VP F AP + E + D+ ES A
Sbjct: 361 HVAPPVRIRQAVPVFAAPPVRKQAEERPVFMVSPPATRPSPAKVEETASTTRNDLQESEA 420
Query: 269 IRCLEQLEM 243
+ L+QL++
Sbjct: 421 VEGLKQLKI 429
>gb|PKI63849.1| hypothetical protein CRG98_015732 [Punica granatum]
Length = 208
Score = 65.5 bits (158), Expect = 1e-09
Identities = 38/86 (44%), Positives = 45/86 (52%), Gaps = 12/86 (13%)
Frame = -1
Query: 554 QTRTTTTHVQRFPAAGAAPYVPFRQCRTSYQGIAPPVIIRTAVPVFS------------X 411
+TR T +FPA GAAPYVP RQ R++ +G+APPV +RTAVPVFS
Sbjct: 69 ETRGTGARPHKFPAPGAAPYVPIRQMRSNCRGMAPPVTMRTAVPVFSAPPRLPSPQSRLP 128
Query: 410 XXXXXXXXXXXXXVCIRQTVPAFTAP 333
VCIR VP F AP
Sbjct: 129 TPMQASPVHIAPPVCIRPVVPVFAAP 154
>ref|XP_017641881.1| PREDICTED: double-stranded RNA-binding protein 2-like [Gossypium
arboreum]
Length = 429
Score = 66.6 bits (161), Expect = 2e-09
Identities = 36/55 (65%), Positives = 39/55 (70%), Gaps = 3/55 (5%)
Frame = -1
Query: 569 PINNSQTRTTTTH---VQRFPAAGAAPYVPFRQCRTSYQGIAPPVIIRTAVPVFS 414
P+ SQT T + Q+FPAAGAAPYVP RQ RT GIAPPV IRTAVPVFS
Sbjct: 249 PVLTSQTPTPESRGVRPQKFPAAGAAPYVPIRQLRTPCCGIAPPVTIRTAVPVFS 303
>gb|KHG19746.1| Double-stranded RNA-binding protein 2 [Gossypium arboreum]
Length = 546
Score = 66.6 bits (161), Expect = 2e-09
Identities = 36/55 (65%), Positives = 39/55 (70%), Gaps = 3/55 (5%)
Frame = -1
Query: 569 PINNSQTRTTTTH---VQRFPAAGAAPYVPFRQCRTSYQGIAPPVIIRTAVPVFS 414
P+ SQT T + Q+FPAAGAAPYVP RQ RT GIAPPV IRTAVPVFS
Sbjct: 189 PVLTSQTPTPESRGVRPQKFPAAGAAPYVPIRQLRTPCCGIAPPVTIRTAVPVFS 243
>gb|KHG19747.1| Double-stranded RNA-binding protein 2 [Gossypium arboreum]
Length = 548
Score = 66.6 bits (161), Expect = 2e-09
Identities = 36/55 (65%), Positives = 39/55 (70%), Gaps = 3/55 (5%)
Frame = -1
Query: 569 PINNSQTRTTTTH---VQRFPAAGAAPYVPFRQCRTSYQGIAPPVIIRTAVPVFS 414
P+ SQT T + Q+FPAAGAAPYVP RQ RT GIAPPV IRTAVPVFS
Sbjct: 189 PVLTSQTPTPESRGVRPQKFPAAGAAPYVPIRQLRTPCCGIAPPVTIRTAVPVFS 243