BLASTX nr result

ID: Rehmannia32_contig00013767 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00013767
         (585 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN07127.1| hypothetical protein CDL12_20309 [Handroanthus im...    70   9e-11
ref|XP_011078748.1| E3 ubiquitin-protein ligase ATL6 [Sesamum in...    65   9e-09

>gb|PIN07127.1| hypothetical protein CDL12_20309 [Handroanthus impetiginosus]
          Length = 399

 Score = 70.5 bits (171), Expect = 9e-11
 Identities = 34/41 (82%), Positives = 35/41 (85%)
 Frame = -3

Query: 583 EAGESSGTSRTPVKMPSFKCLEPKAADETGLFSGEPDRHPV 461
           EAGESSG+SRTPVKMPSFKCLEPKAADE GLFS  P R  V
Sbjct: 359 EAGESSGSSRTPVKMPSFKCLEPKAADEAGLFSDHPARPAV 399


>ref|XP_011078748.1| E3 ubiquitin-protein ligase ATL6 [Sesamum indicum]
          Length = 390

 Score = 64.7 bits (156), Expect = 9e-09
 Identities = 30/41 (73%), Positives = 32/41 (78%)
 Frame = -3

Query: 583 EAGESSGTSRTPVKMPSFKCLEPKAADETGLFSGEPDRHPV 461
           E G+  G+SRTPVKMPSFKCLEPKAADET L S  P R PV
Sbjct: 350 ETGDGVGSSRTPVKMPSFKCLEPKAADETSLISDNPGRPPV 390


Top