BLASTX nr result
ID: Rehmannia32_contig00013721
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia32_contig00013721
(484 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011094840.1| THO complex subunit 4A [Sesamum indicum] 85 4e-17
ref|XP_012831995.1| PREDICTED: THO complex subunit 4A-like [Eryt... 84 1e-16
gb|PHT70579.1| THO complex subunit 4A [Capsicum annuum] 70 9e-12
gb|PHU05117.1| THO complex subunit 4B [Capsicum chinense] 70 2e-11
ref|XP_016543064.1| PREDICTED: THO complex subunit 4A-like [Caps... 70 2e-11
gb|PHT36344.1| THO complex subunit 4A [Capsicum baccatum] 70 3e-11
ref|XP_006349515.1| PREDICTED: THO complex subunit 4A-like [Sola... 70 3e-11
ref|XP_015056383.1| PREDICTED: THO complex subunit 4A-like [Sola... 68 1e-10
ref|XP_009765211.1| PREDICTED: THO complex subunit 4B-like, part... 65 3e-10
gb|KRH24827.1| hypothetical protein GLYMA_12G064900 [Glycine max... 64 5e-10
emb|CAJ44457.1| ALY protein [Nicotiana benthamiana] 65 1e-09
ref|XP_019227564.1| PREDICTED: THO complex subunit 4A-like [Nico... 65 1e-09
ref|XP_016474881.1| PREDICTED: THO complex subunit 4A-like [Nico... 65 1e-09
ref|XP_002531375.1| PREDICTED: THO complex subunit 4A [Ricinus c... 65 1e-09
ref|XP_016485005.1| PREDICTED: THO complex subunit 4A-like isofo... 65 1e-09
ref|XP_009628483.1| PREDICTED: THO complex subunit 4A-like isofo... 65 1e-09
gb|KHN21975.1| RNA and export factor-binding protein 2 [Glycine ... 65 2e-09
ref|XP_014619530.1| PREDICTED: THO complex subunit 4A-like [Glyc... 65 2e-09
ref|XP_021627992.1| THO complex subunit 4A-like [Manihot esculen... 64 2e-09
gb|KHN32110.1| RNA and export factor-binding protein 2 [Glycine ... 64 3e-09
>ref|XP_011094840.1| THO complex subunit 4A [Sesamum indicum]
Length = 227
Score = 84.7 bits (208), Expect = 4e-17
Identities = 42/58 (72%), Positives = 45/58 (77%)
Frame = +1
Query: 1 HGRNARVQGRGGDIRRPQGGVRGMRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDTN 174
HGRNAR+Q R R P G GMRKD GGRGRGEKISAEDLDADLEKYLA AK+T+
Sbjct: 170 HGRNARLQRRSNTRRPPPGAASGMRKDHWGGRGRGEKISAEDLDADLEKYLAEAKETS 227
>ref|XP_012831995.1| PREDICTED: THO complex subunit 4A-like [Erythranthe guttata]
gb|EYU41705.1| hypothetical protein MIMGU_mgv1a013019mg [Erythranthe guttata]
Length = 233
Score = 83.6 bits (205), Expect = 1e-16
Identities = 41/58 (70%), Positives = 44/58 (75%)
Frame = +1
Query: 1 HGRNARVQGRGGDIRRPQGGVRGMRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDTN 174
HGRN Q G +RRPQGG RGMRK GRGR EKISAEDLDADL+KYLA AK+TN
Sbjct: 176 HGRNVPFQASGSAVRRPQGGARGMRKVNGVGRGRAEKISAEDLDADLDKYLAKAKETN 233
>gb|PHT70579.1| THO complex subunit 4A [Capsicum annuum]
Length = 178
Score = 69.7 bits (169), Expect = 9e-12
Identities = 37/54 (68%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Frame = +1
Query: 16 RVQGRGGDIRRPQGGVRG-MRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDTN 174
R Q RGG RRP+GG RG MRKD GRGRGE +SAEDLDA+LEKY A A +TN
Sbjct: 125 RSQQRGGGFRRPRGGGRGNMRKDGGRGRGRGENVSAEDLDAELEKYHAEAMETN 178
>gb|PHU05117.1| THO complex subunit 4B [Capsicum chinense]
Length = 242
Score = 69.7 bits (169), Expect = 2e-11
Identities = 37/54 (68%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Frame = +1
Query: 16 RVQGRGGDIRRPQGGVRG-MRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDTN 174
R Q RGG RRP+GG RG MRKD GRGRGE +SAEDLDA+LEKY A A +TN
Sbjct: 189 RSQQRGGGFRRPRGGGRGNMRKDGGRGRGRGENVSAEDLDAELEKYHAEAMETN 242
>ref|XP_016543064.1| PREDICTED: THO complex subunit 4A-like [Capsicum annuum]
Length = 242
Score = 69.7 bits (169), Expect = 2e-11
Identities = 37/54 (68%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Frame = +1
Query: 16 RVQGRGGDIRRPQGGVRG-MRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDTN 174
R Q RGG RRP+GG RG MRKD GRGRGE +SAEDLDA+LEKY A A +TN
Sbjct: 189 RSQQRGGGFRRPRGGGRGNMRKDGGRGRGRGENVSAEDLDAELEKYHAEAMETN 242
>gb|PHT36344.1| THO complex subunit 4A [Capsicum baccatum]
Length = 244
Score = 69.7 bits (169), Expect = 3e-11
Identities = 37/54 (68%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Frame = +1
Query: 16 RVQGRGGDIRRPQGGVRG-MRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDTN 174
R Q RGG RRP+GG RG MRKD GRGRGE +SAEDLDA+LEKY A A +TN
Sbjct: 191 RSQQRGGGFRRPRGGGRGNMRKDGGRGRGRGENVSAEDLDAELEKYHAEAMETN 244
>ref|XP_006349515.1| PREDICTED: THO complex subunit 4A-like [Solanum tuberosum]
Length = 247
Score = 69.7 bits (169), Expect = 3e-11
Identities = 37/55 (67%), Positives = 40/55 (72%), Gaps = 2/55 (3%)
Frame = +1
Query: 16 RVQGRGGDIRRPQGGVRG--MRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDTN 174
R Q RGG RRP+GG RG MRKD GRGRGE +SAEDLDA+LEKY A A TN
Sbjct: 193 RSQQRGGGFRRPRGGARGGSMRKDGGRGRGRGENVSAEDLDAELEKYHAEAMQTN 247
>ref|XP_015056383.1| PREDICTED: THO complex subunit 4A-like [Solanum pennellii]
Length = 238
Score = 67.8 bits (164), Expect = 1e-10
Identities = 36/54 (66%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Frame = +1
Query: 16 RVQGRGGDIRRPQGGVRG-MRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDTN 174
R Q RGG RRP+GG RG MRKD GRGRG+ +SAEDLDA+LEKY A A TN
Sbjct: 185 RSQQRGGGFRRPRGGGRGSMRKDGGRGRGRGQNVSAEDLDAELEKYHAEAMQTN 238
>ref|XP_009765211.1| PREDICTED: THO complex subunit 4B-like, partial [Nicotiana
sylvestris]
Length = 143
Score = 65.1 bits (157), Expect = 3e-10
Identities = 36/54 (66%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = +1
Query: 16 RVQGRGGDIRRPQGGVRG-MRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDTN 174
R Q RGG RRP G RG MRK+ GRGRGE ISAEDLDADLEKY + A +TN
Sbjct: 90 RSQQRGGGFRRPPRGGRGSMRKEGGRGRGRGENISAEDLDADLEKYHSEAMETN 143
>gb|KRH24827.1| hypothetical protein GLYMA_12G064900 [Glycine max]
gb|KRH24828.1| hypothetical protein GLYMA_12G064900 [Glycine max]
Length = 143
Score = 64.3 bits (155), Expect = 5e-10
Identities = 34/56 (60%), Positives = 40/56 (71%), Gaps = 5/56 (8%)
Frame = +1
Query: 22 QGRGGDIRRPQGGVRGMRKDRV-----GGRGRGEKISAEDLDADLEKYLAGAKDTN 174
QGRGG +RRP G +G+R+DR GG GRGEK+SA+DLDADLEKY A A N
Sbjct: 88 QGRGGALRRPGGRGQGIRRDRGRGRGRGGGGRGEKVSADDLDADLEKYHAEAMQLN 143
>emb|CAJ44457.1| ALY protein [Nicotiana benthamiana]
Length = 246
Score = 65.1 bits (157), Expect = 1e-09
Identities = 36/54 (66%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = +1
Query: 16 RVQGRGGDIRRPQGGVRG-MRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDTN 174
R Q RGG RRP G RG MRK+ GRGRGE ISAEDLDADLEKY + A +TN
Sbjct: 193 RSQQRGGGFRRPPRGGRGSMRKEGGRGRGRGENISAEDLDADLEKYHSEAMETN 246
>ref|XP_019227564.1| PREDICTED: THO complex subunit 4A-like [Nicotiana attenuata]
Length = 247
Score = 65.1 bits (157), Expect = 1e-09
Identities = 36/54 (66%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = +1
Query: 16 RVQGRGGDIRRPQGGVRG-MRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDTN 174
R Q RGG RRP G RG MRK+ GRGRGE ISAEDLDADLEKY + A +TN
Sbjct: 194 RSQQRGGGFRRPPRGGRGSMRKEGGRGRGRGENISAEDLDADLEKYHSEAMETN 247
>ref|XP_016474881.1| PREDICTED: THO complex subunit 4A-like [Nicotiana tabacum]
Length = 247
Score = 65.1 bits (157), Expect = 1e-09
Identities = 36/54 (66%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = +1
Query: 16 RVQGRGGDIRRPQGGVRG-MRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDTN 174
R Q RGG RRP G RG MRK+ GRGRGE ISAEDLDADLEKY + A +TN
Sbjct: 194 RSQQRGGGFRRPPRGGRGSMRKEGGRGRGRGENISAEDLDADLEKYHSEAMETN 247
>ref|XP_002531375.1| PREDICTED: THO complex subunit 4A [Ricinus communis]
gb|EEF31023.1| RNA and export factor binding protein, putative [Ricinus communis]
Length = 247
Score = 65.1 bits (157), Expect = 1e-09
Identities = 34/54 (62%), Positives = 39/54 (72%), Gaps = 3/54 (5%)
Frame = +1
Query: 22 QGRGGDIRRPQGGV---RGMRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDTN 174
QGRGG +RRP+G RG + R GRGRGEK+SAEDLDADLEKY + A TN
Sbjct: 194 QGRGGTMRRPRGASSDGRGFGRGRGRGRGRGEKVSAEDLDADLEKYHSEAMQTN 247
>ref|XP_016485005.1| PREDICTED: THO complex subunit 4A-like isoform X1 [Nicotiana
tabacum]
Length = 249
Score = 65.1 bits (157), Expect = 1e-09
Identities = 36/54 (66%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = +1
Query: 16 RVQGRGGDIRRPQGGVRG-MRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDTN 174
R Q RGG RRP G RG MRK+ GRGRGE ISAEDLDADLEKY + A +TN
Sbjct: 196 RSQQRGGGFRRPPRGGRGSMRKEGGRGRGRGENISAEDLDADLEKYHSEAMETN 249
>ref|XP_009628483.1| PREDICTED: THO complex subunit 4A-like isoform X1 [Nicotiana
tomentosiformis]
Length = 249
Score = 65.1 bits (157), Expect = 1e-09
Identities = 36/54 (66%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Frame = +1
Query: 16 RVQGRGGDIRRPQGGVRG-MRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDTN 174
R Q RGG RRP G RG MRK+ GRGRGE ISAEDLDADLEKY + A +TN
Sbjct: 196 RSQQRGGGFRRPPRGGRGSMRKEGGRGRGRGENISAEDLDADLEKYHSEAMETN 249
>gb|KHN21975.1| RNA and export factor-binding protein 2 [Glycine soja]
Length = 247
Score = 64.7 bits (156), Expect = 2e-09
Identities = 34/56 (60%), Positives = 40/56 (71%), Gaps = 5/56 (8%)
Frame = +1
Query: 22 QGRGGDIRRPQGGVRGMRKDRV-----GGRGRGEKISAEDLDADLEKYLAGAKDTN 174
QGRGG +RRP G +G+R+DR GG GRGEK+SA+DLDADLEKY A A N
Sbjct: 192 QGRGGALRRPGGRGQGVRRDRGRGRGRGGAGRGEKVSADDLDADLEKYHAEAMQLN 247
>ref|XP_014619530.1| PREDICTED: THO complex subunit 4A-like [Glycine max]
gb|KRH29829.1| hypothetical protein GLYMA_11G141500 [Glycine max]
gb|KRH29830.1| hypothetical protein GLYMA_11G141500 [Glycine max]
Length = 247
Score = 64.7 bits (156), Expect = 2e-09
Identities = 34/56 (60%), Positives = 40/56 (71%), Gaps = 5/56 (8%)
Frame = +1
Query: 22 QGRGGDIRRPQGGVRGMRKDRV-----GGRGRGEKISAEDLDADLEKYLAGAKDTN 174
QGRGG +RRP G +G+R+DR GG GRGEK+SA+DLDADLEKY A A N
Sbjct: 192 QGRGGALRRPGGRGQGVRRDRGRGRGRGGAGRGEKVSADDLDADLEKYHAEAMQLN 247
>ref|XP_021627992.1| THO complex subunit 4A-like [Manihot esculenta]
gb|OAY37838.1| hypothetical protein MANES_11G133200 [Manihot esculenta]
Length = 239
Score = 64.3 bits (155), Expect = 2e-09
Identities = 34/52 (65%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +1
Query: 22 QGRGGDIRRPQGGV-RGMRKDRVGGRGRGEKISAEDLDADLEKYLAGAKDTN 174
QGRGG RP+GG RG + R GRGRGEK+SAEDLDADLEKY + A TN
Sbjct: 188 QGRGGTTGRPRGGGGRGFGRGRGRGRGRGEKVSAEDLDADLEKYHSEAMQTN 239
>gb|KHN32110.1| RNA and export factor-binding protein 2 [Glycine soja]
Length = 247
Score = 64.3 bits (155), Expect = 3e-09
Identities = 34/56 (60%), Positives = 40/56 (71%), Gaps = 5/56 (8%)
Frame = +1
Query: 22 QGRGGDIRRPQGGVRGMRKDRV-----GGRGRGEKISAEDLDADLEKYLAGAKDTN 174
QGRGG +RRP G +G+R+DR GG GRGEK+SA+DLDADLEKY A A N
Sbjct: 192 QGRGGALRRPGGRGQGIRRDRGRGRGRGGGGRGEKVSADDLDADLEKYHAEAMQLN 247