BLASTX nr result

ID: Rehmannia32_contig00013716 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00013716
         (506 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AMP82910.1| At5g03900-like protein [Catalpa bungei]                 56   5e-06

>gb|AMP82910.1| At5g03900-like protein [Catalpa bungei]
          Length = 326

 Score = 55.8 bits (133), Expect = 5e-06
 Identities = 27/48 (56%), Positives = 32/48 (66%)
 Frame = +2

Query: 29  RNGHQQSSELRPHNDKTSQLLKLDDKHLENGSEETNLNGHTNPPGQNV 172
           RNGH   SEL+P ND+ SQ   L+ K LENGS+  N+NG  NP  QNV
Sbjct: 279 RNGHHHLSELQPINDEGSQPANLNGKDLENGSDVANINGQINPHRQNV 326


Top