BLASTX nr result
ID: Rehmannia32_contig00012582
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia32_contig00012582
(1389 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KZV21171.1| hypothetical protein F511_24735 [Dorcoceras hygro... 393 e-124
gb|PRQ29719.1| putative RNA-directed DNA polymerase [Rosa chinen... 387 e-121
gb|OMO65653.1| hypothetical protein CCACVL1_21443 [Corchorus cap... 390 e-120
gb|OMO78632.1| Integrase, catalytic core [Corchorus capsularis] 386 e-119
gb|KYP68426.1| Retrovirus-related Pol polyprotein from transposo... 387 e-118
gb|KYP43110.1| Retrovirus-related Pol polyprotein from transposo... 385 e-118
gb|PNX93928.1| hypothetical protein L195_g017092, partial [Trifo... 373 e-117
gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposo... 381 e-117
gb|KYP55668.1| Retrovirus-related Pol polyprotein from transposo... 376 e-116
gb|PNX93614.1| retrovirus-related Pol polyprotein from transposo... 379 e-115
gb|KYP65734.1| Retrovirus-related Pol polyprotein from transposo... 372 e-115
gb|KYP43329.1| Retrovirus-related Pol polyprotein from transposo... 370 e-115
gb|KYP64997.1| Retrovirus-related Pol polyprotein from transposo... 357 e-114
gb|KZV39348.1| hypothetical protein F511_17540 [Dorcoceras hygro... 367 e-113
emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera] 370 e-113
emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera] 365 e-113
gb|PRQ55089.1| putative RNA-directed DNA polymerase [Rosa chinen... 369 e-112
gb|ACB45089.1| putative polyprotein [Solanum habrochaites] 359 e-112
gb|PNX93131.1| retrovirus-related Pol polyprotein from transposo... 361 e-111
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] 361 e-111
>gb|KZV21171.1| hypothetical protein F511_24735 [Dorcoceras hygrometricum]
Length = 977
Score = 393 bits (1010), Expect = e-124
Identities = 211/459 (45%), Positives = 271/459 (59%), Gaps = 6/459 (1%)
Frame = +1
Query: 31 FIPMGFFIKKSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTAAYIINR 210
F +G + SC +TPQQNG+VERKHRH+L++ R + FQ+ +P +W +L AAYIINR
Sbjct: 529 FNSLGIIHQSSCPYTPQQNGLVERKHRHILNVARAVKFQASIPDIYWGECVLHAAYIINR 588
Query: 211 LPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCIFLGYVPGQ 390
PT L+ K+PYE L+S P+Y ++ FGCL +++N +P KF R C+FLGY P Q
Sbjct: 589 TPTPLLSHKTPYEALFSKPPSYQHMRVFGCLCFASNLKP-SHKFDVRARACVFLGYPPHQ 647
Query: 391 KGFKLYNLDTKQILVSRDVDFHEHSFPFHNLTAISPLTPLPQVPITSSDLLDTPLHVTTP 570
KG+KL + T +I +SRDV FHE +FPF N P T + L P + P
Sbjct: 648 KGYKLLDTLTNRIFISRDVVFHETTFPFSNQ---------PSSSTTFNKFLPHPASIPEP 698
Query: 571 AVSE----TEFAXXXXXXXXXXXXXXXXXRASSRISKPPGWLADYVTSNAVAQFSSPAAV 738
+E + R SSR PP W DYV S FS+
Sbjct: 699 EPTEPSSHNQLVDTVPNNISQTTTGSPSTRHSSRPRNPPYWTNDYVCS-----FST---- 749
Query: 739 KPDSPRPTTGTPHPIHSFPY--TISPLFHSTYVSFLANVSTTKEPHSYFQACKDPLWVEA 912
TP+ I ++ +SP TY SFL N+S EP SY +A DP W EA
Sbjct: 750 ----------TPYDIANYLSYKNLSP----TYCSFLTNISQATEPRSYQEAAADPRWQEA 795
Query: 913 MHKELDALELNETWDMVDLPPGKDPIGCKWVFKVKMNPDGSVDRYKARLVAKGYHQVHGV 1092
M E+ ALE N TW +V LPPGK +GC+WV+K+K DGS+DR+KARLVAKGY Q +G+
Sbjct: 796 MAAEITALEANHTWKIVPLPPGKKAVGCRWVYKIKYKSDGSIDRFKARLVAKGYTQTYGI 855
Query: 1093 DYWDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFLHGHLDESFYMLPPDGYTKGKP 1272
DY D FSPVAK+VTVR L+ IA+ +NW LHQ+D+ NAFL G L+E YM P G+ P
Sbjct: 856 DYQDTFSPVAKIVTVRCLLTIASARNWPLHQMDVANAFLQGDLEEDIYMAIPPGFPNQSP 915
Query: 1273 GQVCFLKKSLYGLKQASRQWNTELCDKLTRFGLNQSPHD 1389
C L KSLYGLKQASRQWNT+LC LT+ G +S HD
Sbjct: 916 NMACKLLKSLYGLKQASRQWNTKLCQILTQDGYTRSHHD 954
>gb|PRQ29719.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1080
Score = 387 bits (995), Expect = e-121
Identities = 212/460 (46%), Positives = 280/460 (60%), Gaps = 6/460 (1%)
Frame = +1
Query: 28 FFIPMGFFIKKSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTAAYIIN 207
F+ G + SC+ TPQQNG+ ERKHRHLL+I R L+FQS LP FW ++LTAAY+IN
Sbjct: 333 FYSSKGILHQTSCINTPQQNGVAERKHRHLLNIARALLFQSNLPKPFWGDAILTAAYLIN 392
Query: 208 RLPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCIFLGYVPG 387
R PT L K+P+E L+ +PNYS L+ FGC + + KF PR +CIFLGY G
Sbjct: 393 RTPTPILQGKTPFETLFHKSPNYSHLRVFGCRCFVSTHPLRPSKFDPRSTECIFLGYPHG 452
Query: 388 QKGFKLYNLDTKQILVSRDVDFHEHSFPFHN-LTAISPLTPLPQVPITSSDLL---DTPL 555
QKG+K+Y+L K++LVSRDV F E FP+ + L+ SP P P D+ D
Sbjct: 453 QKGYKVYSLKDKKMLVSRDVIFFETEFPYQSKLSTSSPSVSSPTPPQYHVDISLSQDAIP 512
Query: 556 HVTTPAVSETEFAXXXXXXXXXXXXXXXXXRASSRISKPPGWLADYVTSNAVAQFSSPAA 735
H + P R SSR ++ P L D+ A+ ++P++
Sbjct: 513 HSSLPQ-----------------------PRRSSRPTRTPTTLQDFHIEAALPSHTAPSS 549
Query: 736 VKPDSPRPTTGTPHPI-HSFPYT-ISPLFHSTYVSFLANVSTTKEPHSYFQACKDPLWVE 909
+ GTPH I H Y +SP T+ +F N++ KEP S+ QA +P W E
Sbjct: 550 STSEVTH--LGTPHSIAHVLSYDRLSP----THKAFTVNITLEKEPRSFSQAVLEPRWRE 603
Query: 910 AMHKELDALELNETWDMVDLPPGKDPIGCKWVFKVKMNPDGSVDRYKARLVAKGYHQVHG 1089
AM KE+ AL+ N+TW +V LPP K PIGCKWV+K+K NPDG+V+RYKARLVAKGY QV G
Sbjct: 604 AMDKEIQALQENKTWSLVPLPPDKKPIGCKWVYKIKHNPDGTVERYKARLVAKGYSQVAG 663
Query: 1090 VDYWDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFLHGHLDESFYMLPPDGYTKGK 1269
+DY + F+PVAK+ TVR+L+++A ++ W LHQLD+NNAFL+G L E YM P G+ +
Sbjct: 664 IDYRETFAPVAKLTTVRVLLSLAALQGWHLHQLDVNNAFLNGDLYEDVYMKLPPGFGRKG 723
Query: 1270 PGQVCFLKKSLYGLKQASRQWNTELCDKLTRFGLNQSPHD 1389
+VC L KS+YGLKQASRQW +L L G NQS D
Sbjct: 724 ENRVCKLHKSVYGLKQASRQWFLKLSGALKAAGFNQSWSD 763
>gb|OMO65653.1| hypothetical protein CCACVL1_21443 [Corchorus capsularis]
Length = 1245
Score = 390 bits (1001), Expect = e-120
Identities = 211/450 (46%), Positives = 280/450 (62%), Gaps = 1/450 (0%)
Frame = +1
Query: 43 GFFIKKSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTAAYIINRLPTS 222
G + SCV TPQQNG+VERKHRH+L++ R L FQ+ LP FW +LTA Y+IN P+
Sbjct: 473 GILHQMSCVDTPQQNGVVERKHRHILNVARALRFQAYLPLSFWGECVLTAVYLINYTPSP 532
Query: 223 SLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCIFLGYVPGQKGFK 402
L+ K+P+E+L+S P Y LK FGCL Y+ DKF+PR KCIF+GY G KG++
Sbjct: 533 LLDGKTPFEMLFSKPPAYDHLKVFGCLCYALQKPKPNDKFSPRSSKCIFVGYPNGTKGYR 592
Query: 403 LYNLDTKQILVSRDVDFHEHSFPFHNL-TAISPLTPLPQVPITSSDLLDTPLHVTTPAVS 579
+Y+L TK+I VSRDV F+E+ FPF N T+ + T +P + +DL T H + P
Sbjct: 593 VYDLTTKKIFVSRDVRFYENQFPFENTSTSTNDQTVVPLPALEDTDLSIT--HDSIPPNP 650
Query: 580 ETEFAXXXXXXXXXXXXXXXXXRASSRISKPPGWLADYVTSNAVAQFSSPAAVKPDSPRP 759
E R +R P L D V +N+ +SP+++ ++
Sbjct: 651 PQEQPQPHPPTNPPNQPSTRPQRTKTR----PKRLDDCVCNNSKVD-NSPSSLTHEA--- 702
Query: 760 TTGTPHPIHSFPYTISPLFHSTYVSFLANVSTTKEPHSYFQACKDPLWVEAMHKELDALE 939
++GT + + +F + FHS++ +FLA +S EP S+ QA K P W EAM KEL ALE
Sbjct: 703 SSGTLYSLSNFISYDN--FHSSHKAFLAAISLRDEPKSFSQAVKSPQWREAMQKELAALE 760
Query: 940 LNETWDMVDLPPGKDPIGCKWVFKVKMNPDGSVDRYKARLVAKGYHQVHGVDYWDCFSPV 1119
N TW + LPP K PIGCKW+FK+K DG+++RYKAR VAKGY+Q+ G+D+ + F+PV
Sbjct: 761 NNNTWTLETLPPRKKPIGCKWIFKIKYKSDGTIERYKARFVAKGYNQIEGMDFHETFAPV 820
Query: 1120 AKMVTVRLLVAIATIKNWSLHQLDINNAFLHGHLDESFYMLPPDGYTKGKPGQVCFLKKS 1299
AK+VTVR L+AIA IKNW LHQLD+NNAFLHG LDE YM P GY +VC ++KS
Sbjct: 821 AKLVTVRCLLAIAAIKNWELHQLDVNNAFLHGDLDEEVYMSLPPGYGDKNDSRVCRVRKS 880
Query: 1300 LYGLKQASRQWNTELCDKLTRFGLNQSPHD 1389
LYGLKQASR W + L FG QS D
Sbjct: 881 LYGLKQASRNWFAKFFAALLEFGFIQSTVD 910
>gb|OMO78632.1| Integrase, catalytic core [Corchorus capsularis]
Length = 1247
Score = 386 bits (991), Expect = e-119
Identities = 208/463 (44%), Positives = 272/463 (58%), Gaps = 7/463 (1%)
Frame = +1
Query: 22 KIFFIPMGFFIKKSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTAAYI 201
++F G + SCV TPQQNG+VERKHRH+L++ R L FQ+ LP K+W +L A Y+
Sbjct: 515 QLFCQQNGILTQFSCVSTPQQNGVVERKHRHILEVARALRFQANLPIKYWGECVLIATYL 574
Query: 202 INRLPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCIFLGYV 381
IN +PT L+ KSPYE+L+S P+YS L+ FGCL Y++ +DKF R C+FLGY
Sbjct: 575 INYVPTPLLSGKSPYEILFSRKPSYSHLRVFGCLCYTSVIPRSRDKFHARATTCLFLGYP 634
Query: 382 PGQKGFKLYNLDTKQILVSRDVDFHEHSFPF-------HNLTAISPLTPLPQVPITSSDL 540
GQKG+K+Y+L T +I SRDV F EH FPF HN + +P+ PLP T S
Sbjct: 635 HGQKGYKVYDLTTHKIFTSRDVVFCEHIFPFQDKNSPNHNTSTTTPI-PLPIFDDTESMS 693
Query: 541 LDTPLHVTTPAVSETEFAXXXXXXXXXXXXXXXXXRASSRISKPPGWLADYVTSNAVAQF 720
L + H TT E R+ K P ++
Sbjct: 694 LGSAPHTTTMMTHTPEILDSNDTTNTNTPPTIPQENRPVRVRKLPSRYHNFHVDLPGNNK 753
Query: 721 SSPAAVKPDSPRPTTGTPHPIHSFPYTISPLFHSTYVSFLANVSTTKEPHSYFQACKDPL 900
S+P + S ++G +P+ +F F+S + SFL ++ EP SY QA KD
Sbjct: 754 STPTS----SNNASSGMSYPLVNF--LSYSKFNSPHTSFLMAITQHNEPTSYKQAIKDTH 807
Query: 901 WVEAMHKELDALELNETWDMVDLPPGKDPIGCKWVFKVKMNPDGSVDRYKARLVAKGYHQ 1080
W EAM KEL+ALE N TW + LP GK IG KWV+K+K + DG+++RYKARLVAKGY Q
Sbjct: 808 WQEAMKKELEALEQNHTWTLEQLPTGKKAIGSKWVYKIKYHSDGTIERYKARLVAKGYTQ 867
Query: 1081 VHGVDYWDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFLHGHLDESFYMLPPDGYT 1260
V G+DY + F PVAK+ TVR L+A+ K+W LHQLD++NAFLHG LD+ YM PP GY
Sbjct: 868 VEGLDYTETFPPVAKLTTVRTLLAVVAAKSWELHQLDVHNAFLHGDLDKEIYMKPPPGYL 927
Query: 1261 KGKPGQVCFLKKSLYGLKQASRQWNTELCDKLTRFGLNQSPHD 1389
+VC L+KSLYGLKQASRQW + + FG QS D
Sbjct: 928 SSNDNRVCRLRKSLYGLKQASRQWYAKFSTAILNFGFIQSKAD 970
Score = 138 bits (348), Expect = 3e-31
Identities = 66/132 (50%), Positives = 87/132 (65%), Gaps = 1/132 (0%)
Frame = +1
Query: 988 IGCKWVFKVKMNPDGSVDRYKARLVAKGYHQVHGVDYWDCFSPVAKMVTVRLLVAIATIK 1167
+GCKWVFK K DGS++R KARLVAKG++QV GVD+ + FSPV K T+R+++ IA +
Sbjct: 4 VGCKWVFKTKTKADGSLERLKARLVAKGFNQVPGVDFLETFSPVVKPATIRVVLTIALAR 63
Query: 1168 NWSLHQLDINNAFLHGHLDESFYMLPPDGYTKGK-PGQVCFLKKSLYGLKQASRQWNTEL 1344
+W + QLD+ NAFLHG L+E +M P G+ + P VC L K+LYGL+QA R W
Sbjct: 64 DWEIRQLDVKNAFLHGFLNEPVFMTQPPGFQNSQHPNYVCKLNKALYGLRQAPRVWFDRF 123
Query: 1345 CDKLTRFGLNQS 1380
L FG S
Sbjct: 124 STFLLSFGFTCS 135
>gb|KYP68426.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1423
Score = 387 bits (994), Expect = e-118
Identities = 211/478 (44%), Positives = 279/478 (58%), Gaps = 15/478 (3%)
Frame = +1
Query: 1 NSLATLAKIFFIPMGFFIKKSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFS 180
N L K ++ +G + SCV TPQQNG+VERKH+H+L + R LMFQS + FW ++
Sbjct: 619 NGSEFLLKDWYAKLGIVHQTSCVNTPQQNGVVERKHQHILSMARALMFQSNVSKMFWNYA 678
Query: 181 LLTAAYIINRLPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYK 360
+ A ++INRLPT L SPY VLYS P++S LK FGCL +++ ++ K PR K
Sbjct: 679 IGHAVHLINRLPTRFLQQNSPYYVLYSEKPDFSHLKVFGCLAFASTLSHNRTKLEPRSRK 738
Query: 361 CIFLGYVPGQKGFKLYNLDTKQILVSRDVDFHEHSFPFHNLTAIS----PLTPLPQVPIT 528
C+FLGY G KGF +Y+L T++ +SRDV F+E+ FP +I P+ P+ Q+P+T
Sbjct: 739 CMFLGYSSGTKGFIMYDLKTRETFISRDVQFYENIFPLQKDFSIQSTDGPVVPIAQMPLT 798
Query: 529 SSDLLDTPLHVTTPAVSETEFAXXXXXXXXXXXXXXXXX----------RASSRISKPPG 678
S D + + H + ETE R S R+ PG
Sbjct: 799 SCDPIPSHTHDN---LDETEHEHNSSTLPMTNSSNSDQPNIEINIPEIRRTSQRVKNRPG 855
Query: 679 WLADYVTSNAVAQFSSPAAVKPDSPRPTTGTPHPIHSF-PYTISPLFHSTYVSFLANVST 855
+L DY + AA K D T +PI + PYT + + SF++ +S+
Sbjct: 856 YLQDY--------HCTLAASKVDQSSSTAR--YPISDYLPYTS---YSAVQQSFVSTISS 902
Query: 856 TKEPHSYFQACKDPLWVEAMHKELDALELNETWDMVDLPPGKDPIGCKWVFKVKMNPDGS 1035
EP SY A W EA+ ELDAL+ +TW + DLPP K +GC+WVFKVK + DGS
Sbjct: 903 IIEPRSYQDAINHDCWKEAIRAELDALDKQKTWILTDLPPNKRAVGCRWVFKVKYHADGS 962
Query: 1036 VDRYKARLVAKGYHQVHGVDYWDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFLHG 1215
V+RYKARLVAKG+ Q+ G+DY D FSPV +M T+R+ +AIA NWS+HQLDIN AFLHG
Sbjct: 963 VERYKARLVAKGFTQIPGLDYIDTFSPVVRMTTIRVFLAIAAASNWSVHQLDINTAFLHG 1022
Query: 1216 HLDESFYMLPPDGYTKGKPGQVCFLKKSLYGLKQASRQWNTELCDKLTRFGLNQSPHD 1389
L E YM PP G P +VC L+KSLYGLKQASRQWN +L + L FG QS D
Sbjct: 1023 DLVEEVYMKPPPGLILSSPNKVCKLQKSLYGLKQASRQWNIKLTETLKLFGFVQSKSD 1080
>gb|KYP43110.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1353
Score = 385 bits (990), Expect = e-118
Identities = 210/478 (43%), Positives = 278/478 (58%), Gaps = 15/478 (3%)
Frame = +1
Query: 1 NSLATLAKIFFIPMGFFIKKSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFS 180
N L K ++ +G + SCV TPQQNG+VERKH+H+L + R LMFQS + FW ++
Sbjct: 549 NGSEFLLKDWYAKLGIVHQTSCVNTPQQNGVVERKHQHILSMARALMFQSNVSKMFWNYA 608
Query: 181 LLTAAYIINRLPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYK 360
+ A ++INRLPT L SPY VLYS P++S LK FGCL +++ ++ K PR K
Sbjct: 609 IGHAVHLINRLPTRFLQQNSPYYVLYSEKPDFSHLKVFGCLAFASTLSHNRTKLEPRSRK 668
Query: 361 CIFLGYVPGQKGFKLYNLDTKQILVSRDVDFHEHSFPFHNLTAIS----PLTPLPQVPIT 528
C+FLGY G KGF +Y+L T++ +SRDV F+E+ FP +I P+ P+ Q+P+T
Sbjct: 669 CMFLGYSSGTKGFIMYDLKTRETFISRDVQFYENIFPLQKDFSIQSTDGPVVPIAQMPLT 728
Query: 529 SSDLLDTPLHVTTPAVSETEFAXXXXXXXXXXXXXXXXX----------RASSRISKPPG 678
S D + + H + ETE R S R+ PG
Sbjct: 729 SCDPIPSHTHDN---LDETEHEHNSSTLPMTNSSNSDQPNIEINIPEIRRTSQRVKNRPG 785
Query: 679 WLADYVTSNAVAQFSSPAAVKPDSPRPTTGTPHPIHSF-PYTISPLFHSTYVSFLANVST 855
+L DY + AA K D T +PI + PYT + + SF++ +S+
Sbjct: 786 YLQDY--------HCTLAASKVDQSSSTAR--YPISDYLPYTS---YSAVQQSFVSTISS 832
Query: 856 TKEPHSYFQACKDPLWVEAMHKELDALELNETWDMVDLPPGKDPIGCKWVFKVKMNPDGS 1035
EP SY A W EA+ ELDAL+ +TW + DLPP K +GC+WVFKVK + DGS
Sbjct: 833 IIEPRSYQDAINHDCWKEAIRAELDALDKQKTWILTDLPPNKRAVGCRWVFKVKYHADGS 892
Query: 1036 VDRYKARLVAKGYHQVHGVDYWDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFLHG 1215
V+RYKARLVAKG+ Q+ G+DY D FSPV +M T+R+ +AIA NWS+HQLDIN AFLHG
Sbjct: 893 VERYKARLVAKGFTQIPGLDYIDTFSPVVRMTTIRVFLAIAAASNWSVHQLDINTAFLHG 952
Query: 1216 HLDESFYMLPPDGYTKGKPGQVCFLKKSLYGLKQASRQWNTELCDKLTRFGLNQSPHD 1389
L E YM PP G P +VC L+KSLYGLKQ SRQWN +L + L FG QS D
Sbjct: 953 DLVEEVYMKPPPGLILSSPNKVCKLQKSLYGLKQVSRQWNIKLTETLKLFGFVQSKSD 1010
>gb|PNX93928.1| hypothetical protein L195_g017092, partial [Trifolium pratense]
Length = 865
Score = 373 bits (958), Expect = e-117
Identities = 210/479 (43%), Positives = 275/479 (57%), Gaps = 25/479 (5%)
Frame = +1
Query: 28 FFIPMGFFIKKSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTAAYIIN 207
FF G +++CV+TPQQNG+VERKHRH+L + R L+F S LP +FW +LTA Y+IN
Sbjct: 63 FFQSHGIEHQRTCVYTPQQNGVVERKHRHILVVARALLFHSHLPLEFWGECVLTAVYLIN 122
Query: 208 RLPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCIFLGYVPG 387
RLP+ L+ KSP+E+LY+ P+ L+ FGCL Y+ P KF PR + IF+GY G
Sbjct: 123 RLPSPLLSNKSPFELLYNKPPSLDHLRVFGCLCYATIVHP-THKFDPRAKRGIFVGYPTG 181
Query: 388 QKGFKLYNLDTKQILVSRDVDFHEHSFPF------HNLTAISP----LTPLP-------- 513
QKG+K+Y+ +TK VSRDV F E +FP NL + P + LP
Sbjct: 182 QKGYKIYDPETKTFFVSRDVKFCETNFPSIPNTSEPNLISSHPSYEAIDDLPSPTSSHHQ 241
Query: 514 --QVPITSSDLLDTPLHVTTPAVSET----EFAXXXXXXXXXXXXXXXXXRASSRISKPP 675
Q I S+ ++P H+TT S E R S R PP
Sbjct: 242 SQQTDIPSTHEPNSPSHITTETSSAASPIVEPTPLTTHTTDPPTPFIPQVRKSVRDKHPP 301
Query: 676 GWLADYVTSNAVAQFSSPAAVKPDSPRPTTGTPHPI-HSFPYTISPLFHSTYVSFLANVS 852
W DY S V + P P +GT +P+ H Y+ S+ +FLAN++
Sbjct: 302 IWHNDYHMSTQVNK-------TPSEPTSGSGTRYPLSHYLSYS---RISSSNCAFLANIT 351
Query: 853 TTKEPHSYFQACKDPLWVEAMHKELDALELNETWDMVDLPPGKDPIGCKWVFKVKMNPDG 1032
+EP SY QA DPLW +AM+ EL+ALE N TW +V LP G PIGCKWV+K+K DG
Sbjct: 352 AHREPQSYDQAVHDPLWQDAMNAELEALEQNNTWSLVPLPSGHKPIGCKWVYKIKYKSDG 411
Query: 1033 SVDRYKARLVAKGYHQVHGVDYWDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFLH 1212
+++RYKARLVAKGY QV G+DY + FSP AK+ T+R L+ +A +NW +HQLD+ NAFLH
Sbjct: 412 TIERYKARLVAKGYTQVEGIDYQETFSPTAKVTTLRCLLTVAAARNWFIHQLDVQNAFLH 471
Query: 1213 GHLDESFYMLPPDGYTKGKPGQVCFLKKSLYGLKQASRQWNTELCDKLTRFGLNQSPHD 1389
G L E YM PP G + VC L KSLYGLKQASR W + + + + G QS D
Sbjct: 472 GDLHELVYMEPPPGLRRQGENVVCRLNKSLYGLKQASRNWFSTFSEVIQKAGYQQSKAD 530
>gb|KYP61022.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 1316
Score = 381 bits (979), Expect = e-117
Identities = 206/459 (44%), Positives = 274/459 (59%), Gaps = 5/459 (1%)
Frame = +1
Query: 28 FFIPMGFFIKKSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTAAYIIN 207
+F G + +CV TPQQNGIVERKH+HLL++ R+L+FQ+ LPS FW F+L+ A ++IN
Sbjct: 545 YFSSKGIIHQTTCVETPQQNGIVERKHQHLLNVTRSLLFQANLPSIFWCFALMHATFLIN 604
Query: 208 RLPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCIFLGYVPG 387
+PT L+ SP+E LY H + S+L FGCL YS+ H+ K PR + CIFLG+ P
Sbjct: 605 CIPTPFLHNISPFEKLYGHPCDISILCVFGCLCYSSTITSHRTKLDPRAHPCIFLGFKPH 664
Query: 388 QKGFKLYNLDTKQILVSRDVDFHEHSFPFHNLTAISPLTPLPQVPITSSDLLDTPLH--- 558
KG+ L+NL T +LVSR+V FHE FP + P +P P+ P+H
Sbjct: 665 TKGYLLFNLHTHGLLVSRNVLFHEDHFP----SFTKPHSPSFSSPV--------PIHYNY 712
Query: 559 VTTPAVSETEFAXXXXXXXXXXXXXXXXXRASSRISKPPGWLADYVTSNAVAQFSSPAAV 738
V P + R S+R +PP +L D+ A
Sbjct: 713 VDYPTFPSSSIVESSDPPTSDQHSSPPPLRRSTRPRRPPTYLQDF----------HGAFT 762
Query: 739 KPDSPRPTTGTPHPIHSFPY--TISPLFHSTYVSFLANVSTTKEPHSYFQACKDPLWVEA 912
+ +TG HP+HSF +SP FH ++ ++S+ EP ++ +A K W++A
Sbjct: 763 STSTAHSSTGIRHPLHSFLSYDLLSPSFHH----YVFSISSVTEPKNFAEASKSDSWLKA 818
Query: 913 MHKELDALELNETWDMVDLPPGKDPIGCKWVFKVKMNPDGSVDRYKARLVAKGYHQVHGV 1092
MH+E+ ALE N TW + LPP K IGC+WV+KVK DGS+DRYKARLVAKGY Q+ G+
Sbjct: 819 MHEEIFALEANNTWVLTTLPPHKTAIGCRWVYKVKHKADGSIDRYKARLVAKGYTQMEGL 878
Query: 1093 DYWDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFLHGHLDESFYMLPPDGYTKGKP 1272
D++D FSPVAK+ TVRLL+++A I NW L QLD+NNAFLHG L+E YM P G T P
Sbjct: 879 DFFDTFSPVAKLTTVRLLLSLAAINNWHLKQLDVNNAFLHGDLNEEVYMQLPPGLTPSFP 938
Query: 1273 GQVCFLKKSLYGLKQASRQWNTELCDKLTRFGLNQSPHD 1389
GQVC L++SLYGLKQASRQW L L + G SP D
Sbjct: 939 GQVCRLQRSLYGLKQASRQWYARLSSFLIQHGYVPSPSD 977
>gb|KYP55668.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1136
Score = 376 bits (966), Expect = e-116
Identities = 204/457 (44%), Positives = 275/457 (60%), Gaps = 3/457 (0%)
Frame = +1
Query: 28 FFIPMGFFIKKSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTAAYIIN 207
+F G + +CV TPQQNGIVERKH+HLL++ R+L+FQ+ LPS FW F+L AA++IN
Sbjct: 366 YFSSKGIIHQTTCVETPQQNGIVERKHQHLLNVTRSLLFQANLPSIFWCFALKHAAFLIN 425
Query: 208 RLPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCIFLGYVPG 387
+PT L+ SP+E LY H + S+L+ FGCL YS+ H+ K PR + CIFLG+ P
Sbjct: 426 CIPTPFLHNISPFEKLYGHPCDISILRVFGCLCYSSIITSHRTKLDPRAHPCIFLGFKPH 485
Query: 388 QKGFKLYNLDTKQILVSRDVDFHEHSFP-FHNLTAISPLTPLPQVPITSSDLLDTPLHVT 564
KG+ L NL T +LVS++V FHE FP F + S +P+P +P +D
Sbjct: 486 TKGYLLVNLHTHGLLVSQNVIFHEDHFPSFTKPNSPSFSSPVP-IPYNYADY-------- 536
Query: 565 TPAVSETEFAXXXXXXXXXXXXXXXXXRASSRISKPPGWLADYVTSNAVAQFSSPAAVKP 744
P+ + R S+R +PP +L D+ A
Sbjct: 537 -PSFPSSSIVESSEPPPPDQHSSPPPLRRSTRPRRPPTYLQDF-----------HGAFTS 584
Query: 745 DSPRPTTGTPHPIHSFPY--TISPLFHSTYVSFLANVSTTKEPHSYFQACKDPLWVEAMH 918
P +TG HP+HSF +SP FH ++ ++S+ +P ++ +A K W++AMH
Sbjct: 585 TGPHSSTGIRHPLHSFISYDRLSPSFHH----YVFSISSVTKPKNFVEASKSDSWLKAMH 640
Query: 919 KELDALELNETWDMVDLPPGKDPIGCKWVFKVKMNPDGSVDRYKARLVAKGYHQVHGVDY 1098
+E+ ALE N TW + LPP K IGC+WV+KVK DGS+DRYKARLVAKGY Q+ G+D+
Sbjct: 641 EEISALEANNTWVLTTLPPHKTAIGCRWVYKVKHKADGSIDRYKARLVAKGYTQMEGLDF 700
Query: 1099 WDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFLHGHLDESFYMLPPDGYTKGKPGQ 1278
+D FSPVAK+ TVRLL+++A I N L QLD+NN+FLHG L+E YM P G T PGQ
Sbjct: 701 FDTFSPVAKLTTVRLLISLAAIHNCHLKQLDVNNSFLHGDLNEEVYMQLPPGITPSFPGQ 760
Query: 1279 VCFLKKSLYGLKQASRQWNTELCDKLTRFGLNQSPHD 1389
VC L++SLYGLKQASRQW L L + G SP D
Sbjct: 761 VCRLQRSLYGLKQASRQWYARLSSFLIQHGYVPSPSD 797
>gb|PNX93614.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trifolium pratense]
Length = 1430
Score = 379 bits (974), Expect = e-115
Identities = 215/477 (45%), Positives = 277/477 (58%), Gaps = 23/477 (4%)
Frame = +1
Query: 28 FFIPMGFFIKKSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTAAYIIN 207
FF+ G ++SCV TPQQNGIVERKH+H+L++ R L FQ+ LPS FW S+L + ++IN
Sbjct: 623 FFLAKGIAHQRSCVETPQQNGIVERKHQHILNVARALSFQAFLPSNFWHLSILHSVHLIN 682
Query: 208 RLPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCIFLGYVPG 387
RLPT L KSPYEVL+ P L+ FGCL +++ H+ KF PR K +FLGY G
Sbjct: 683 RLPTPFLQHKSPYEVLFQQPPTLLHLRTFGCLAFASTLHNHRTKFMPRARKTVFLGYRDG 742
Query: 388 QKGFKLYNLDTKQILVSRDVDFHEHSFPFHNLTAISPLTP-------LPQVPITSSDLLD 546
KGF LY++ LVSR+V F+E FP ++ + + LP P
Sbjct: 743 TKGFLLYDISNHSFLVSRNVIFYEDVFPLSSVNSSHTSSTTTLDNFVLPIDPPNFPSSCP 802
Query: 547 TPLHVTTPAVSETEFA-----------XXXXXXXXXXXXXXXXXRASSRISKPPGWLADY 693
PL V+T T+ A R S+RI K PG+L D+
Sbjct: 803 APLSVSTGTNPLTDHAENSATLVDNQVSNSPAVPPQNSSIPAPTRVSNRIRKIPGYLQDF 862
Query: 694 VTSNAVAQFSSPAAVKPDSPRPTTGTPHPI-HSFPYTISPLFHSTYVSFLANVSTTKEPH 870
S +Q S ++ + +PI S YT + Y F ++STT EP
Sbjct: 863 HCSLLPSQHQSSSS--------NAFSTYPISSSLSYTNCA---TAYKHFCLSISTTIEPK 911
Query: 871 SYFQACKDPLWVEAMHKELDALELNETWDMVDLPPGKDPIGCKWVFKVKMNPDGSVDRYK 1050
++ QACK W EAM EL ALELN TW +VDLP GK+PIGCKWV+K+K N DGS++RYK
Sbjct: 912 TFKQACKSDCWKEAMKSELAALELNRTWSIVDLPTGKNPIGCKWVYKIKHNADGSIERYK 971
Query: 1051 ARLVAKGYHQVHGVDYWDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFLHGHLDES 1230
ARLVAKGY Q+ GVDY+D FSPVAK+ TV+ L+A+A+IK W L QLD+NNAFLHG L+E
Sbjct: 972 ARLVAKGYTQMEGVDYFDTFSPVAKLTTVKTLLALASIKGWFLEQLDVNNAFLHGDLNEE 1031
Query: 1231 FYMLPPDGY----TKGKPGQVCFLKKSLYGLKQASRQWNTELCDKLTRFGLNQSPHD 1389
YM P G + +VC L KSLYGLKQASRQW ++L L G +QS D
Sbjct: 1032 VYMSLPPGVIIPNSCSNTPKVCRLHKSLYGLKQASRQWYSKLSSALLSLGYSQSAAD 1088
>gb|KYP65734.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
[Cajanus cajan]
Length = 1013
Score = 372 bits (954), Expect = e-115
Identities = 209/468 (44%), Positives = 272/468 (58%), Gaps = 15/468 (3%)
Frame = +1
Query: 31 FIPMGFFIKKSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTAAYIINR 210
F+ G + SCV TPQQNG+VERKH+H+L+ R L FQ+ LP FW F++ A ++INR
Sbjct: 224 FLSKGIIHQGSCVETPQQNGVVERKHQHILNTARALYFQASLPKNFWNFAIQHAVHLINR 283
Query: 211 LPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCIFLGYVPGQ 390
+P+ L+ K+PY+ L+ P L+ FGCL Y++ Q H+ KF PR K + LGY G
Sbjct: 284 IPSPLLDNKTPYQALHQRPPILVHLRSFGCLAYASTLQAHRTKFQPRAKKSVLLGYKEGV 343
Query: 391 KGFKLYNLDTKQILVSRDVDFHEHSFPFH-----NLTAISPLTPLPQVPITSSDLLDTPL 555
KG+ LY+L + + +SR+V FHE +FPFH +LT SP Q PI+S LD
Sbjct: 344 KGYLLYDLHSHEFFMSRNVFFHEFTFPFHTPSQTSLTQPSPTPITIQTPISSPYDLDN-- 401
Query: 556 HVTTPAVSETEFAXXXXXXXXXXXXXXXXXRASSRISKPPGWLADYVTS-----NAVAQF 720
HV S T R S+R+ +PP +L DY S + F
Sbjct: 402 HVPPSPTSSTSIPPEQPHQPLSPAPAPS--RHSTRMRQPPSYLKDYHCSLLAPTGRINSF 459
Query: 721 SSPAAVKPDSPRPTTGTPHPIHSFPYTISPLFHS-TYVSFLANVSTTKEPHSYFQACKDP 897
S TPH I S T++ F S +Y F +VST EPH+Y QA K
Sbjct: 460 SG------------ISTPHSISS---TLTYDFCSPSYKQFCLSVSTNFEPHTYTQASKYD 504
Query: 898 LWVEAMHKELDALELNETWDMVDLPPGKDPIGCKWVFKVKMNPDGSVDRYKARLVAKGYH 1077
W+ AM EL AL++N+TW +VDLP GK PIGCKWV+K+K DGS++RYKARLVAKGY
Sbjct: 505 CWIMAMKTELAALDMNQTWSIVDLPSGKRPIGCKWVYKIKYLSDGSIERYKARLVAKGYS 564
Query: 1078 QVHGVDYWDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFLHGHLDESFYMLPPDGY 1257
Q G+DY D +SPVAK+ TVR+L+A+ IK W L QLD+NNAFLHG L E YM P G
Sbjct: 565 QTEGLDYLDTYSPVAKLTTVRVLLALTAIKGWFLEQLDVNNAFLHGDLHEEVYMTLPPGL 624
Query: 1258 ----TKGKPGQVCFLKKSLYGLKQASRQWNTELCDKLTRFGLNQSPHD 1389
+ +VC L KS+YGLKQASRQW ++L L G + S D
Sbjct: 625 SVPSSSNTAPKVCKLHKSIYGLKQASRQWYSKLSSALISMGYSPSTAD 672
>gb|KYP43329.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 952
Score = 370 bits (949), Expect = e-115
Identities = 202/466 (43%), Positives = 275/466 (59%), Gaps = 5/466 (1%)
Frame = +1
Query: 7 LATLAKIFFIPMGFFIKKSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLL 186
++T + FF G + SC +TPQQNG VER+HRH+L++ R L F LP W +L
Sbjct: 162 VSTHLRSFFENRGIIRQLSCTYTPQQNGRVERRHRHILNVARALRFDGHLPIDLWGECIL 221
Query: 187 TAAYIINRLPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCI 366
+A ++INR PT LN K PYEVL+ P+Y ++ GCL Y+ DKFA R KC+
Sbjct: 222 SATHLINRTPTKLLNGKCPYEVLHDTPPSYDHIRVLGCLCYATVLPKPFDKFAARSQKCV 281
Query: 367 FLGYVPGQKGFKLYNLDTKQILVSRDVDFHEHSFPFHNLTAISPLTPLPQVPITSSDLLD 546
F+GY +KG+K++NLDTK+I VSRDV F E FPF + T + ++P P P ++S +L
Sbjct: 282 FVGYPSNKKGWKVFNLDTKEIFVSRDVKFFEDEFPFASPT--TNISPAPIHPTSTSMILY 339
Query: 547 TPLHVTTPAVSETE-----FAXXXXXXXXXXXXXXXXXRASSRISKPPGWLADYVTSNAV 711
P H T + S+ + R +SR +P L DY NA
Sbjct: 340 EP-HDTRTSSSDVAPLPDPESVERGSSVDTSSPSSMPLRRTSRSHRPLAHLKDYYCRNA- 397
Query: 712 AQFSSPAAVKPDSPRPTTGTPHPIHSFPYTISPLFHSTYVSFLANVSTTKEPHSYFQACK 891
+ P++ S P G +PI F + F S + FLA VS T EP S+ +A K
Sbjct: 398 ---TKPSSANTLSSIPL-GILYPIEHF--VTNHNFSSQHQKFLAAVSNTIEPRSFKEAMK 451
Query: 892 DPLWVEAMHKELDALELNETWDMVDLPPGKDPIGCKWVFKVKMNPDGSVDRYKARLVAKG 1071
DPLW +AM E+ ALE N TW + LPPGK I CKW+F++K + DGS++RYKARLV G
Sbjct: 452 DPLWQQAMKLEIQALEDNHTWVVTSLPPGKKAIPCKWIFRIKYHSDGSIERYKARLVIAG 511
Query: 1072 YHQVHGVDYWDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFLHGHLDESFYMLPPD 1251
+Q+ G DY + F+PVAKMV+VR +++A K W ++QLD++NAFLHG L+E YM P
Sbjct: 512 NNQIEGEDYNETFAPVAKMVSVRTFLSVAVAKGWDIYQLDVHNAFLHGDLEEEVYMHFPP 571
Query: 1252 GYTKGKPGQVCFLKKSLYGLKQASRQWNTELCDKLTRFGLNQSPHD 1389
G++ G PG C L++SLYGLKQ+ R W +L D L FG QS D
Sbjct: 572 GFSVGSPGSACKLQRSLYGLKQSPRNWFAKLRDSLLNFGFQQSKAD 617
>gb|KYP64997.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 591
Score = 357 bits (916), Expect = e-114
Identities = 194/450 (43%), Positives = 262/450 (58%), Gaps = 12/450 (2%)
Frame = +1
Query: 16 LAKIFFIPMGFFIKKSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTAA 195
L K ++ +G + SCV TPQQNG+VERKH+H+L + R LMFQS + FW +++ A
Sbjct: 155 LLKDWYAKLGIVHQTSCVNTPQQNGVVERKHQHILSMARALMFQSNVSKMFWNYAIGHAV 214
Query: 196 YIINRLPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCIFLG 375
++INRLPT L SPY VLYS P++S LK FGCL +++ ++ K PR KC+FLG
Sbjct: 215 HLINRLPTRFLQQNSPYYVLYSEKPDFSHLKVFGCLAFASTLSHNRTKLEPRSRKCMFLG 274
Query: 376 YVPGQKGFKLYNLDTKQILVSRDVDFHEHSFPFHNLTAIS----PLTPLPQVPITSSDLL 543
Y G KGF +Y+L T++ +SRDV F+E+ FP +I P+ P+ Q+P+T+ D +
Sbjct: 275 YSSGTKGFIMYDLKTRETFISRDVQFYENIFPLQKDFSIQSTDGPVVPIAQMPLTNCDPI 334
Query: 544 DTPLHVTTPAVS-ETEFAXXXXXXXXXXXXXXXXX------RASSRISKPPGWLADYVTS 702
+ H E F+ R S R+ PG+L DY
Sbjct: 335 PSHTHDNLDETEDEHNFSTLPMTNSNNNNQPNIEINIPEIRRTSQRVKNKPGYLQDY--- 391
Query: 703 NAVAQFSSPAAVKPDSPRPTTGTPHPIHSF-PYTISPLFHSTYVSFLANVSTTKEPHSYF 879
+ A K D T +PI + PYT + ++VS ++++ EP SY
Sbjct: 392 -----HCTLVASKVDQSSSTVR--YPISDYLPYTSYSVVQQSFVSAISSII---EPRSYQ 441
Query: 880 QACKDPLWVEAMHKELDALELNETWDMVDLPPGKDPIGCKWVFKVKMNPDGSVDRYKARL 1059
W EA+ ELDAL+ +TW + DLP K +GC+WVFKVK + DGSV+RYKAR+
Sbjct: 442 DVINHDCWKEAIRAELDALDKQKTWILTDLPSKKRVVGCRWVFKVKYHADGSVERYKARI 501
Query: 1060 VAKGYHQVHGVDYWDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFLHGHLDESFYM 1239
VAKG+ Q+ G+DY D FSPV +M TVR+L+ I NWS+HQLDIN AFLHG L E YM
Sbjct: 502 VAKGFTQIPGLDYIDTFSPVVRMTTVRVLLVIVVASNWSVHQLDINTAFLHGDLVEEVYM 561
Query: 1240 LPPDGYTKGKPGQVCFLKKSLYGLKQASRQ 1329
PP G P +VC L+KSLYGLKQASRQ
Sbjct: 562 KPPPGLILPSPNKVCKLQKSLYGLKQASRQ 591
>gb|KZV39348.1| hypothetical protein F511_17540 [Dorcoceras hygrometricum]
Length = 1025
Score = 367 bits (941), Expect = e-113
Identities = 206/461 (44%), Positives = 266/461 (57%), Gaps = 7/461 (1%)
Frame = +1
Query: 28 FFIPMGFFIKKSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTAAYIIN 207
FF G SCV PQQN IVERKH+H+L++ R L+FQS +P +W +LT+ Y+IN
Sbjct: 557 FFKAEGIVSYHSCVERPQQNSIVERKHQHILNVARALLFQSNIPLVYWSDCILTSVYLIN 616
Query: 208 RLPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCIFLGYVPG 387
R+P L+ K+P+EV+++ PN+S L+ FGCL Y + H+ KF+PR + IFLGY PG
Sbjct: 617 RVPAPILSNKTPFEVMHTKIPNFSHLRVFGCLCYGSTLLSHRTKFSPRAIRSIFLGYPPG 676
Query: 388 QKGFKLYNLDTKQILVSRDVDFHEHSFPFHN--LTAISP-LTPLPQVPITSSDLLDTPLH 558
KG+KL NLDT +I +SRDV FHE FPF N L+A P L + T + + P +
Sbjct: 677 YKGYKLLNLDTNEIYISRDVTFHETVFPFRNKPLSAAEPCLNEFDTLSTTQN--VQNPPN 734
Query: 559 VTTPAVSETEFAXXXXXXXXXXXXXXXXXRASSRISKPPGWLADYVTSNAVAQFSSPAAV 738
V P V++ + R K P L+DY A
Sbjct: 735 VDAPVVNDP---------------------LNGRHRKRPSHLSDY---------HCYAVC 764
Query: 739 KPDSPRPTTGTPHPIHSFPYTISPLFHSTYVSFLANVSTTKEPHSYFQACKDPLWVEAMH 918
P T T HP+ T + Y + + N+S+ EP+SY QA P W +AM
Sbjct: 765 DPSC----TSTAHPLSKVLSTHK--LSNPYKALVMNISSIIEPNSYNQAVLKPEWCQAMD 818
Query: 919 KELDALELNETWDMVDLPPGKDPIGCKWVFKVKMNPDGSVDRYKARLVAKGYHQVHGVDY 1098
EL+ALE N TW +V LPPGK +GC+WV+K K DGS++RYKARLVAKGY Q GV++
Sbjct: 819 AELEALERNNTWSIVSLPPGKHTVGCRWVYKAKFRADGSLERYKARLVAKGYTQQEGVEF 878
Query: 1099 WDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFLHGHLDESFYMLPPDGYTKGK--- 1269
++ FSPVAK+VTVR L+A+A I WSL QLD+NNAFLHG L+E YM P GY K
Sbjct: 879 FETFSPVAKIVTVRTLLALAAIHGWSLTQLDVNNAFLHGDLNEEIYMSLPPGYQKCSNRL 938
Query: 1270 -PGQVCFLKKSLYGLKQASRQWNTELCDKLTRFGLNQSPHD 1389
VC L KSLYGLKQASRQW + L G QS D
Sbjct: 939 PHNAVCKLHKSLYGLKQASRQWFAKFSSTLLDIGFMQSHAD 979
>emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]
Length = 1262
Score = 370 bits (950), Expect = e-113
Identities = 197/460 (42%), Positives = 273/460 (59%), Gaps = 6/460 (1%)
Frame = +1
Query: 28 FFIPMGFFIKKSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTAAYIIN 207
F+ G + SCV TP QNG VERKH+HLL++ R+LMFQSKLP +W +LT ++IN
Sbjct: 642 FYQEHGIIHQLSCVETPXQNGRVERKHQHLLNVARSLMFQSKLPLSYWTDCVLTXTHLIN 701
Query: 208 RLPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCIFLGYVPG 387
R P+S LN ++PY++L+ PNY+ K FGCL +++ ++ KF PR KCIFLGY P
Sbjct: 702 RTPSSILNNQTPYQLLFQKPPNYNYFKXFGCLCFASTITNNRGKFQPRATKCIFLGYPPN 761
Query: 388 QKGFKLYNLDTKQILVSRDVDFHEHSFPFHNLTAISPLT--PLPQVPITSSDLLDTPLHV 561
KG+K+ +L T + VSR+V FHE +FP T P PQ+ + S + + +
Sbjct: 762 IKGYKVLDLTTXKXFVSRNVJFHESTFPSIPDTIHKPFVFXDFPQIYESKSCKPNNSVSI 821
Query: 562 TTPAVSETE----FAXXXXXXXXXXXXXXXXXRASSRISKPPGWLADYVTSNAVAQFSSP 729
T+ + + T+ R S R P +L +Y N +
Sbjct: 822 TSGSTNSTDPTSXIESSIPENTIHANNDANSLRRSERTKHLPKYLQNYYCGNM-----TK 876
Query: 730 AAVKPDSPRPTTGTPHPIHSFPYTISPLFHSTYVSFLANVSTTKEPHSYFQACKDPLWVE 909
+ +P + + P + F + S + +F++ +S+T EP +Y QA P W
Sbjct: 877 IDLATQAPSSCSSSGKPYYIFSFLSDSKLSSKHKAFISIISSTFEPKTYKQAVSIPHWKT 936
Query: 910 AMHKELDALELNETWDMVDLPPGKDPIGCKWVFKVKMNPDGSVDRYKARLVAKGYHQVHG 1089
AM E+ ALE N+TWD+ LPP K IGCKWV++VK DGSV+RYKARLVAKGY Q G
Sbjct: 937 AMTDEIKALEHNKTWDLAILPPNKTTIGCKWVYQVKFKADGSVERYKARLVAKGYTQQEG 996
Query: 1090 VDYWDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFLHGHLDESFYMLPPDGYTKGK 1269
+D++D +SPVAKM TVR+L+AIA K W LHQLD+NNAFLH L+E YM P G++
Sbjct: 997 LDFFDTYSPVAKMTTVRVLLAIAATKQWYLHQLDVNNAFLHEDLNEDVYMQLPPGFSTPN 1056
Query: 1270 PGQVCFLKKSLYGLKQASRQWNTELCDKLTRFGLNQSPHD 1389
+VC LKKSLYGL+QASRQW ++L L +FG +Q+ D
Sbjct: 1057 DPRVCKLKKSLYGLRQASRQWYSKLSSSLLKFGFSQAKTD 1096
>emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera]
Length = 1039
Score = 365 bits (938), Expect = e-113
Identities = 205/453 (45%), Positives = 263/453 (58%), Gaps = 10/453 (2%)
Frame = +1
Query: 61 SCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTAAYIINRLPTSSLNMKS 240
SC +TPQQNG+VERKHRHLL++GR L FQ+ LP KFW S+ TA Y+INRLPT L+ KS
Sbjct: 276 SCAYTPQQNGVVERKHRHLLNVGRALRFQANLPLKFWGESIQTACYLINRLPTPLLSHKS 335
Query: 241 PYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCIFLGYVPGQKGFKLYNLDT 420
PY++L + P+Y L+ FGCL Y+ N P KF R +CIF+GY GQKG+++Y+L+T
Sbjct: 336 PYQLLXNKLPSYHHLRTFGCLCYATNLLP-THKFDQRARRCIFVGYPLGQKGYRVYDLET 394
Query: 421 KQILVSRDVDFHEHSFPFHNLTAISP----LTPLPQV---PITSSDLLDTPLHVTTPAVS 579
+ S DV FHEH FPFH + PLPQ PIT+ P +S
Sbjct: 395 NKFFSSXDVVFHEHIFPFHTNPQEEQHDVVVLPLPQTSYEPITTETTKPQADDQPPPLLS 454
Query: 580 ETEFAXXXXXXXXXXXXXXXXX--RASSRISKPPGWLADYVTSNAVAQFSSPAAVKPDSP 753
E R S RI +P L ++ + SS ++
Sbjct: 455 SLESTSNERTLDLDTIVSPPPPATRRSDRIKQPNVXLRNFHLYHTAKVXSSQSS------ 508
Query: 754 RPTTGTPHPIHSFPYTISPLFHSTYVSFLANVSTTKEPHSYFQACKDPLWVEAMHKELDA 933
+GT HP+ Y Y +F+ ++T EP +Y QA DP W EAM EL A
Sbjct: 509 -SLSGTRHPLTR--YISYAQLSPKYRNFVCAITTLVEPTTYEQAVLDPKWQEAMAAELHA 565
Query: 934 LELNETWDMVDLPPGKDPIGCKWVFKVKMNPDGSVDRYKARLVAKGYHQVHGVDYWDCFS 1113
LE N TW + LP G PIGCKWV+K+K N DG+V+RYKARLVAKG+ Q G+DY + FS
Sbjct: 566 LEQNHTWTLTPLPSGHRPIGCKWVYKIKYNSDGTVERYKARLVAKGFTQREGIDYKETFS 625
Query: 1114 PVAKMVTVRLLVAIATIKNWSLHQLDINNAFLHGHLDESFYM-LPPDGYTKGKPGQVCFL 1290
PVAK+ TVR L+AIA +++WSLHQ+D+ NAFLHG L E YM LPP +G+ VC
Sbjct: 626 PVAKLTTVRCLLAIAAVRHWSLHQMDVQNAFLHGDLLEEVYMQLPPGFXRQGETPMVCRX 685
Query: 1291 KKSLYGLKQASRQWNTELCDKLTRFGLNQSPHD 1389
KSLYGLKQASR W + + + G QS D
Sbjct: 686 NKSLYGLKQASRSWFXKFSATIQQDGFXQSRAD 718
>gb|PRQ55089.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1285
Score = 369 bits (947), Expect = e-112
Identities = 207/498 (41%), Positives = 279/498 (56%), Gaps = 44/498 (8%)
Frame = +1
Query: 28 FFIPMGFFIKKSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTAAYIIN 207
F+ G + SCV TPQQNG+ ERKHRHLL++ R L+FQ+ LP FW ++LTAAY+IN
Sbjct: 448 FYSSKGIIHQTSCVNTPQQNGVAERKHRHLLNMARALLFQANLPKPFWGDAILTAAYLIN 507
Query: 208 RLPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCIFLGYVPG 387
R PT L K+P+E L+ P+YS L+ FGC + + KF PR +C+FLGY G
Sbjct: 508 RTPTPILQGKTPFEKLFHKEPSYSHLRVFGCQCFVSTHPTRPSKFDPRSMECVFLGYPHG 567
Query: 388 QKGFKLYNLDTKQILVSRDVDFHEHSFPF--------HNLTAISPLTP---------LPQ 516
QKG+K+YNL TK+ LVSRDV F E++FPF T + P P +P+
Sbjct: 568 QKGYKVYNLTTKKSLVSRDVIFFENAFPFPKNSESFPSQNTDLFPSIPRLAHYDNPSIPK 627
Query: 517 VPITSSDLLDTPLHVTTPAVSETEF--------------------------AXXXXXXXX 618
+P +S P+ P S ++ +
Sbjct: 628 IPPSSPTHHSPPMISPNPQSSAEQYLNSPSKSLSSTDPVSSDITLPNLDTISSDHIPSLS 687
Query: 619 XXXXXXXXXRASSRISKPPGWLADYVTSNAVAQFSSPAAVKPDSPRPTTGTPHPIHSFPY 798
R S+R +K P L D+ A+ P + P S TP HS +
Sbjct: 688 PPEQTPPRPRKSTRATKLPTALQDFHIDAAL-----PTRLAPSSSSNEVTTPGTAHSLSH 742
Query: 799 TIS-PLFHSTYVSFLANVSTTKEPHSYFQACKDPLWVEAMHKELDALELNETWDMVDLPP 975
+S S + +F AN++ +EP S+ QA KDP W EAM E+ AL+ N+TW +V P
Sbjct: 743 VLSYANLSSPHRTFTANITLQREPTSFSQAVKDPKWREAMRLEVQALQDNKTWSLVPPPA 802
Query: 976 GKDPIGCKWVFKVKMNPDGSVDRYKARLVAKGYHQVHGVDYWDCFSPVAKMVTVRLLVAI 1155
K PIGCKWV+K+K NPDG+++RYKARLVAKGY QV G+DY + F+PVAK+ TVR+L+++
Sbjct: 803 HKRPIGCKWVYKIKYNPDGTIERYKARLVAKGYSQVEGLDYRETFAPVAKLTTVRVLLSL 862
Query: 1156 ATIKNWSLHQLDINNAFLHGHLDESFYMLPPDGYTKGKPGQVCFLKKSLYGLKQASRQWN 1335
A +NW LHQLD+NNAFL+G L E YM P G+ + +VC L KSLYGL+QAS+QW
Sbjct: 863 AAQQNWHLHQLDVNNAFLNGDLHEDVYMHLPPGFERKGEHKVCKLHKSLYGLRQASKQWF 922
Query: 1336 TELCDKLTRFGLNQSPHD 1389
+L L G QS D
Sbjct: 923 LKLSSALKSAGFKQSWSD 940
>gb|ACB45089.1| putative polyprotein [Solanum habrochaites]
Length = 849
Score = 359 bits (921), Expect = e-112
Identities = 194/462 (41%), Positives = 261/462 (56%), Gaps = 17/462 (3%)
Frame = +1
Query: 31 FIPMGFFIKKSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTAAYIINR 210
F G + SCV+TPQQNG+VER+HR +L++ R + FQ+ LP +FW + A Y+INR
Sbjct: 403 FRTAGIVHQSSCVYTPQQNGVVERRHRQILEVARAIRFQANLPIRFWGLCVQNAVYLINR 462
Query: 211 LPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCIFLGYVPGQ 390
+P+++L+ +SP+ V + P+ L+ GCL Y+ N H DKF R K + +GY Q
Sbjct: 463 IPSTALSGRSPFAVFFGKEPSLHHLRVMGCLCYAVNHHTHGDKFDTRSIKSVLMGYSTTQ 522
Query: 391 KGFKLYNLDTKQILVSRDVDFHEHSFPFHNLTAIS-----------------PLTPLPQV 519
KG+KLY+L T+ +SRDV F E +PF ++ S PL +
Sbjct: 523 KGYKLYDLSTQTFFISRDVTFREDQYPFQHIQDESCDSSFFENPDMFVYDDSSTIPLHET 582
Query: 520 PITSSDLLDTPLHVTTPAVSETEFAXXXXXXXXXXXXXXXXXRASSRISKPPGWLADYVT 699
ITS D T + +P+ F R S+R SKPPGWL D+V
Sbjct: 583 FITSPDQTSTSIDTPSPSPISHHFGTSTTTDL----------RRSTRSSKPPGWLHDFVH 632
Query: 700 SNAVAQFSSPAAVKPDSPRPTTGTPHPIHSFPYTISPLFHSTYVSFLANVSTTKEPHSYF 879
+A S +++ T T HP+ S+ S + Y L N S EP SY
Sbjct: 633 ---IATHSPTSSL-------TCSTAHPLSSYMSYSS--ISTPYFQSLCNFSAIPEPTSYN 680
Query: 880 QACKDPLWVEAMHKELDALELNETWDMVDLPPGKDPIGCKWVFKVKMNPDGSVDRYKARL 1059
+A + W++AM EL AL N TWD+V LP GK IGCKWV+KVK N G V+RYKARL
Sbjct: 681 EAVQHSHWIQAMELELKALHDNHTWDLVPLPLGKKAIGCKWVYKVKFNAQGEVERYKARL 740
Query: 1060 VAKGYHQVHGVDYWDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFLHGHLDESFYM 1239
VAKGY Q G+DY + FSPV KMVTVR+++++A + W LHQ+D+ NAFL G L E YM
Sbjct: 741 VAKGYTQQEGLDYQETFSPVVKMVTVRVVLSLAAMHGWFLHQMDVFNAFLQGDLVEEVYM 800
Query: 1240 LPPDGYTKGKPGQVCFLKKSLYGLKQASRQWNTELCDKLTRF 1365
+PP G + +VC L KSLYGLKQASRQWN +L + F
Sbjct: 801 VPPPGLLQQGESKVCKLNKSLYGLKQASRQWNLKLSEATYEF 842
>gb|PNX93131.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
[Trifolium pratense]
Length = 982
Score = 361 bits (927), Expect = e-111
Identities = 206/467 (44%), Positives = 280/467 (59%), Gaps = 13/467 (2%)
Frame = +1
Query: 28 FFIPMGFFIKKSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTAAYIIN 207
F+ G + SCV +PQQNG VERKH+H+L+I R L++QS LP FW +++L A IIN
Sbjct: 173 FYSSHGILHQTSCVESPQQNGRVERKHQHILNIARALLYQSNLPKYFWSYAVLHATAIIN 232
Query: 208 RLPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCIFLGYVPG 387
++ T L KSP+E+L+ P+ + LK FG L Y++ +K K +PRG KC+FLG G
Sbjct: 233 KIVTPVLQNKSPHEMLFHCLPDLNELKVFGSLAYASTLDVNKTKLSPRGRKCVFLGQKQG 292
Query: 388 QKGFKLYNLDTKQILVSRDVDFHEHSFPF-----------HNLTAISPLTPLPQVPITSS 534
KG L++LD+K I +SR+V +H P+ H+ P + Q TS+
Sbjct: 293 VKGSILFDLDSKNIFLSRNVTHFDHILPYTTNTSKLHWHYHSTINCEPFLDIDQSH-TST 351
Query: 535 DLLDTPLHVTTPA--VSETEFAXXXXXXXXXXXXXXXXXRASSRISKPPGWLADYVTSNA 708
+ DT T P +S+ + R RI P +L+D+V S
Sbjct: 352 NPSDTTPSPTPPTNIISDPNPSTSSPLPSSPFPIQPANTRPD-RIKHRPSYLSDFVCS-- 408
Query: 709 VAQFSSPAAVKPDSPRPTTGTPHPIHSFPYTISPLFHSTYVSFLANVSTTKEPHSYFQAC 888
+S + K S TGT +PI SF +++S L S V F ++++ EP +Y +AC
Sbjct: 409 ----ASDDSAKSSS----TGTIYPISSF-HSLSQLSPSHSV-FTSSLTQHTEPRTYTEAC 458
Query: 889 KDPLWVEAMHKELDALELNETWDMVDLPPGKDPIGCKWVFKVKMNPDGSVDRYKARLVAK 1068
K W++AM EL+AL TW +VDLPP PIG KWV+K+K DG+++RYKARLVAK
Sbjct: 459 KSQHWIQAMTSELEALARTGTWKIVDLPPNVKPIGSKWVYKIKHKSDGTIERYKARLVAK 518
Query: 1069 GYHQVHGVDYWDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFLHGHLDESFYMLPP 1248
GY+QV G+D++D FSPVAK+ TVR+L+AIA+IK W LHQLD+NNAFLHG L E+ YM P
Sbjct: 519 GYNQVEGLDFFDTFSPVAKLTTVRMLLAIASIKGWFLHQLDVNNAFLHGDLQENVYMSIP 578
Query: 1249 DGYTKGKPGQVCFLKKSLYGLKQASRQWNTELCDKLTRFGLNQSPHD 1389
DG KP QVC L KSLYGLKQASR+W +L L + G QS D
Sbjct: 579 DGVQCSKPNQVCKLLKSLYGLKQASRKWYEKLTSLLVKEGYTQSSSD 625
>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
Length = 1099
Score = 361 bits (927), Expect = e-111
Identities = 197/464 (42%), Positives = 272/464 (58%), Gaps = 10/464 (2%)
Frame = +1
Query: 28 FFIPMGFFIKKSCVFTPQQNGIVERKHRHLLDIGRTLMFQSKLPSKFWPFSLLTAAYIIN 207
+F G + SCV TPQQNG VERKH+H+L++GR L FQ+ LP FW S+L AA++IN
Sbjct: 316 YFSATGILFQTSCVGTPQQNGRVERKHKHILNVGRALRFQANLPIYFWGESVLAAAHLIN 375
Query: 208 RLPTSSLNMKSPYEVLYSHTPNYSLLKPFGCLVYSANTQPHKDKFAPRGYKCIFLGYVPG 387
R P+ L+ K+P+E+L+ P+Y+ + FGCL ++ + + DKFA R KC+FLGY G
Sbjct: 376 RTPSPLLHNKTPFEILFGTPPSYAAIHTFGCLSFAHDQKSKGDKFASRSRKCVFLGYPFG 435
Query: 388 QKGFKLYNLDTKQILVSRDVDFHEHSFPFHNLTAISPLTPLPQVPITSSDLLDTPLHVTT 567
+KG+KL++LDTK++ VSRDV F E FPF N A++ I +++ TP H
Sbjct: 436 KKGWKLFDLDTKELFVSRDVKFFEDVFPFGNPGAVN---------IIPENIVPTPKH-KI 485
Query: 568 PAVSETEFAXXXXXXXXXXXXXXXXXRASSRISKPPG----------WLADYVTSNAVAQ 717
P + + F +S+ S P G L D+VT VA+
Sbjct: 486 PRLLQRLFHLGRKLFPTVGLDSLGLDNSSNGQSAPMGKGMRDKFPSVLLRDFVTHTVVAE 545
Query: 718 FSSPAAVKPDSPRPTTGTPHPIHSFPYTISPLFHSTYVSFLANVSTTKEPHSYFQACKDP 897
SPA P P +GTP+PI Y F Y FLA + ++ +P S+ +A KD
Sbjct: 546 SPSPATPSPQHP---SGTPYPIAH--YINCDNFSVHYRKFLATIISSNDPKSFKEAMKDV 600
Query: 898 LWVEAMHKELDALELNETWDMVDLPPGKDPIGCKWVFKVKMNPDGSVDRYKARLVAKGYH 1077
W ++MH+E+ ALE N TW + LP GK +G +WV++ K +G ++R K+RLV G H
Sbjct: 601 GWQKSMHEEIRALEENGTWXLEPLPKGKRALGSQWVYRTKYFSNGDIERLKSRLVVLGNH 660
Query: 1078 QVHGVDYWDCFSPVAKMVTVRLLVAIATIKNWSLHQLDINNAFLHGHLDESFYMLPPDGY 1257
Q G+DY + FSPVAKM VR +AIA KNW LHQ+D++NAFLHG L+E YM P G+
Sbjct: 661 QEAGIDYHETFSPVAKMTMVRAFLAIAASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGF 720
Query: 1258 TKGKPGQVCFLKKSLYGLKQASRQWNTELCDKLTRFGLNQSPHD 1389
+ P VC L+KSLYGLKQA R W ++L L +G QS D
Sbjct: 721 ERSDPNLVCRLRKSLYGLKQAPRCWFSKLVTALKGYGFLQSYSD 764