BLASTX nr result

ID: Rehmannia32_contig00011704 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00011704
         (639 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011097425.1| ATP-dependent RNA helicase-like protein DB10...    88   2e-16
ref|XP_011098453.1| ATP-dependent RNA helicase-like protein DB10...    70   3e-10
ref|XP_022855769.1| ATP-dependent RNA helicase-like protein DB10...    61   2e-07
ref|XP_022855766.1| ATP-dependent RNA helicase-like protein DB10...    61   2e-07
ref|XP_022855765.1| ATP-dependent RNA helicase-like protein DB10...    61   2e-07
gb|PIN04912.1| ATP-dependent RNA helicase [Handroanthus impetigi...    58   3e-06

>ref|XP_011097425.1| ATP-dependent RNA helicase-like protein DB10 [Sesamum indicum]
          Length = 779

 Score = 87.8 bits (216), Expect = 2e-16
 Identities = 54/137 (39%), Positives = 69/137 (50%), Gaps = 20/137 (14%)
 Frame = +3

Query: 3    PDKNLGWAENHGGAXXXXXXXXPERFDGSAPPRRSFHETMMEGARSLPSKNEQASPYANA 182
            P++N GW EN G A        PERF G+AP RRSFHETMME AR LPS NEQ  P+ NA
Sbjct: 632  PNRNFGWVENQGRARSRS----PERFGGAAPTRRSFHETMMEQARPLPSTNEQTLPHGNA 687

Query: 183  --------DSQSHHLEKSLPPPDDNKK------------EISQDNGVQLENEQLADGSNS 302
                    D    H E+S+  PD N+K            E+ + +  Q  NE+   G ++
Sbjct: 688  NTKESKSCDGPQSHCEQSISTPDVNEKETVGASHNNAGQELGESSPRQSGNEEFGHGLDT 747

Query: 303  NDVITEEDNAWK*ESHR 353
            ND   E+      E +R
Sbjct: 748  NDRDEEDKGMLLAEENR 764


>ref|XP_011098453.1| ATP-dependent RNA helicase-like protein DB10 [Sesamum indicum]
          Length = 803

 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 44/129 (34%), Positives = 61/129 (47%), Gaps = 21/129 (16%)
 Frame = +3

Query: 3    PDKNLGWAENHGGAXXXXXXXXPERFDGSAPPRRSFHETMMEGARSLPSKNEQASPYANA 182
            P ++ GW + HG           ERF+G+AP R+SFHE++MEG R+ PSK+ +A  Y N 
Sbjct: 660  PYRSSGWGDKHGKTRSHSRSRSSERFNGAAPTRKSFHESVMEGVRASPSKHARAFSYGNP 719

Query: 183  DSQSHHL---------EKSLPPPDDNKKEISQDNGVQLEN------------EQLADGSN 299
             S+ +           EKSL P  + K  +   N    E             E+ A+G N
Sbjct: 720  TSKDYKNYDNLKVVDGEKSLSPRVNEKGTVRGSNNSAAEKRRRSPPRQSTGYEEFANGLN 779

Query: 300  SNDVITEED 326
            SN    EED
Sbjct: 780  SNFRDEEED 788


>ref|XP_022855769.1| ATP-dependent RNA helicase-like protein DB10 isoform X3 [Olea
           europaea var. sylvestris]
          Length = 635

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 42/109 (38%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
 Frame = +3

Query: 3   PDKNLGWAENHGGAXXXXXXXXPERFDGSAPPRRSFHETMMEGAR-SLPSKNEQASPYAN 179
           P+KN  W EN G A         ERFD  AP  RSFHE MME AR S+P  + + S   +
Sbjct: 514 PNKNSSWGENLGRARSRSRSRSAERFDTIAPTHRSFHEMMMEQARTSVPHSHRERSRSPS 573

Query: 180 ADSQSHHLEKSLPPPDDNKKEIS-QDNGVQLENEQLADGSNSNDVITEE 323
           A ++     +S    D N K++S +  G     E+LA+G +SN    EE
Sbjct: 574 AGNRKETFGRS---HDGNDKQMSGRSPGQHQGTEELANGPSSNHGEEEE 619


>ref|XP_022855766.1| ATP-dependent RNA helicase-like protein DB10 isoform X2 [Olea
           europaea var. sylvestris]
 ref|XP_022855767.1| ATP-dependent RNA helicase-like protein DB10 isoform X2 [Olea
           europaea var. sylvestris]
 ref|XP_022855768.1| ATP-dependent RNA helicase-like protein DB10 isoform X2 [Olea
           europaea var. sylvestris]
          Length = 756

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 42/109 (38%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
 Frame = +3

Query: 3   PDKNLGWAENHGGAXXXXXXXXPERFDGSAPPRRSFHETMMEGAR-SLPSKNEQASPYAN 179
           P+KN  W EN G A         ERFD  AP  RSFHE MME AR S+P  + + S   +
Sbjct: 635 PNKNSSWGENLGRARSRSRSRSAERFDTIAPTHRSFHEMMMEQARTSVPHSHRERSRSPS 694

Query: 180 ADSQSHHLEKSLPPPDDNKKEIS-QDNGVQLENEQLADGSNSNDVITEE 323
           A ++     +S    D N K++S +  G     E+LA+G +SN    EE
Sbjct: 695 AGNRKETFGRS---HDGNDKQMSGRSPGQHQGTEELANGPSSNHGEEEE 740


>ref|XP_022855765.1| ATP-dependent RNA helicase-like protein DB10 isoform X1 [Olea
           europaea var. sylvestris]
          Length = 799

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 42/109 (38%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
 Frame = +3

Query: 3   PDKNLGWAENHGGAXXXXXXXXPERFDGSAPPRRSFHETMMEGAR-SLPSKNEQASPYAN 179
           P+KN  W EN G A         ERFD  AP  RSFHE MME AR S+P  + + S   +
Sbjct: 678 PNKNSSWGENLGRARSRSRSRSAERFDTIAPTHRSFHEMMMEQARTSVPHSHRERSRSPS 737

Query: 180 ADSQSHHLEKSLPPPDDNKKEIS-QDNGVQLENEQLADGSNSNDVITEE 323
           A ++     +S    D N K++S +  G     E+LA+G +SN    EE
Sbjct: 738 AGNRKETFGRS---HDGNDKQMSGRSPGQHQGTEELANGPSSNHGEEEE 783


>gb|PIN04912.1| ATP-dependent RNA helicase [Handroanthus impetiginosus]
          Length = 740

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 40/101 (39%), Positives = 54/101 (53%)
 Frame = +3

Query: 3   PDKNLGWAENHGGAXXXXXXXXPERFDGSAPPRRSFHETMMEGARSLPSKNEQASPYANA 182
           P  N GWAEN  G         PERF G+ P + SFHETMM  A+S  S ++ ASPY N 
Sbjct: 638 PRGNSGWAENRNG----DRSRSPERF-GATPIKLSFHETMMNQAQSAASTSDGASPYGN- 691

Query: 183 DSQSHHLEKSLPPPDDNKKEISQDNGVQLENEQLADGSNSN 305
              ++  E     P ++ ++ ++ +G     EQ A GSNSN
Sbjct: 692 ---NNAWECKSNEPQNHCEKSTESSG----KEQPAHGSNSN 725


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