BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00011595
         (532 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_009353974.1| RNA polymerase alpha subunit (chloroplast) [...   332   e-112
ref|YP_009354237.1| RNA polymerase alpha subunit (chloroplast) [...   329   e-111
ref|YP_009344468.1| RNA polymerase alpha subunit (chloroplast) [...   328   e-110
gb|AVM81934.1| RNA polymerase alpha subunit (chloroplast) [Tecom...   321   e-108
ref|YP_009354062.1| RNA polymerase alpha subunit (chloroplast) [...   319   e-107
gb|AVM82710.1| RNA polymerase alpha subunit (chloroplast) [Podra...   318   e-107
gb|AKZ23818.1| RNA polymerase alpha subunit (plastid) [Verbena h...   318   e-107
ref|YP_009309483.1| RNA polymerase alpha subunit (chloroplast) [...   318   e-107
ref|YP_009316344.1| RNA polymerase alpha subunit (plastid) [Cast...   316   e-106
gb|ALO62155.1| RNA polymerase alpha subunit (chloroplast) [Cresc...   315   e-106
ref|YP_009462374.1| RNA polymerase alpha subunit (chloroplast) [...   314   e-105
ref|YP_009309657.1| RNA polymerase alpha subunit (chloroplast) [...   314   e-105
gb|AUT84085.1| RNA polymerase alpha subunit (chloroplast) [Fonta...   313   e-105
ref|YP_009443978.1| RNA polymerase alpha subunit (chloroplast) [...   313   e-105
gb|ANX10198.1| RNA polymerase alpha subunit (chloroplast) [Triph...   313   e-105
ref|YP_009117253.1| RNA polymerase alpha subunit (chloroplast) [...   313   e-105
ref|YP_008964066.1| RNA polymerase subunit alpha [Ajuga reptans]...   313   e-105
gb|AKZ23819.1| RNA polymerase alpha subunit (plastid) [Teucrium ...   313   e-105
ref|YP_009459731.1| RNA polymerase alpha subunit (chloroplast) [...   312   e-104
ref|YP_009309906.1| RNA polymerase alpha subunit (chloroplast) [...   312   e-104

>ref|YP_009353974.1| RNA polymerase alpha subunit (chloroplast) [Rehmannia glutinosa]
 gb|AQZ40505.1| RNA polymerase alpha subunit (chloroplast) [Rehmannia glutinosa]
          Length = 337

 Score =  332 bits (850), Expect = e-112
 Identities = 163/177 (92%), Positives = 163/177 (92%)
 Frame = -1

Query: 532 DASICVRGPGYVTAQDMILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHN 353
           DASICVRGPGYVTAQDMILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHN
Sbjct: 105 DASICVRGPGYVTAQDMILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHN 164

Query: 352 FQDGSYPLDAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 173
           FQDGSYPLDAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID
Sbjct: 165 FQDGSYPLDAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 224

Query: 172 LFIPFLHKEEENLPLEDNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
           LFIPFLHKEEENLPLEDNQHMVPLSPFTFHE              KSIFIDQFELSP
Sbjct: 225 LFIPFLHKEEENLPLEDNQHMVPLSPFTFHEKLDKLRKNKKKIALKSIFIDQFELSP 281


>ref|YP_009354237.1| RNA polymerase alpha subunit (chloroplast) [Rehmannia piasezkii]
 gb|AQZ40767.1| RNA polymerase alpha subunit (chloroplast) [Rehmannia piasezkii]
          Length = 337

 Score =  329 bits (843), Expect = e-111
 Identities = 161/177 (90%), Positives = 163/177 (92%)
 Frame = -1

Query: 532 DASICVRGPGYVTAQDMILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHN 353
           DASICVRGPGYVTAQD+ILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHN
Sbjct: 105 DASICVRGPGYVTAQDIILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHN 164

Query: 352 FQDGSYPLDAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 173
           FQDGSYPLDAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID
Sbjct: 165 FQDGSYPLDAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 224

Query: 172 LFIPFLHKEEENLPLEDNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
           LFIPFLHKEEENLPLEDNQHMVPLSPFTFH+              KSIFIDQFELSP
Sbjct: 225 LFIPFLHKEEENLPLEDNQHMVPLSPFTFHDKLDKLRKNKKKIALKSIFIDQFELSP 281


>ref|YP_009344468.1| RNA polymerase alpha subunit (chloroplast) [Rehmannia chingii]
 ref|YP_009354324.1| RNA polymerase alpha subunit (chloroplast) [Rehmannia elata]
 gb|APT42264.1| RNA polymerase alpha subunit (chloroplast) [Rehmannia chingii]
 gb|AQZ40854.1| RNA polymerase alpha subunit (chloroplast) [Rehmannia elata]
          Length = 337

 Score =  328 bits (840), Expect = e-110
 Identities = 160/177 (90%), Positives = 163/177 (92%)
 Frame = -1

Query: 532 DASICVRGPGYVTAQDMILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHN 353
           DASICVRGPGYVTAQD+ILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHN
Sbjct: 105 DASICVRGPGYVTAQDIILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHN 164

Query: 352 FQDGSYPLDAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 173
           FQDGSYPLDAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID
Sbjct: 165 FQDGSYPLDAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 224

Query: 172 LFIPFLHKEEENLPLEDNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
           LFIPFLHKEEENLPLEDNQHMVPLSPFTFH+              KSIFIDQF+LSP
Sbjct: 225 LFIPFLHKEEENLPLEDNQHMVPLSPFTFHDKLDKLRKNKKKIALKSIFIDQFQLSP 281


>gb|AVM81934.1| RNA polymerase alpha subunit (chloroplast) [Tecomaria capensis]
          Length = 334

 Score =  321 bits (823), Expect = e-108
 Identities = 156/177 (88%), Positives = 160/177 (90%)
 Frame = -1

Query: 532 DASICVRGPGYVTAQDMILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHN 353
           DASICVRGPGYVT QD+ILPPYVEI+DNTQHIASLTEPINLCIGLEIERNRGYL KMPHN
Sbjct: 105 DASICVRGPGYVTTQDIILPPYVEIVDNTQHIASLTEPINLCIGLEIERNRGYLRKMPHN 164

Query: 352 FQDGSYPLDAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 173
           FQDGSYP+DAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID
Sbjct: 165 FQDGSYPIDAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 224

Query: 172 LFIPFLHKEEENLPLEDNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
           LFIPFLHKEEENLPLEDNQH VPLSPFTFH+              KSIFIDQFELSP
Sbjct: 225 LFIPFLHKEEENLPLEDNQHTVPLSPFTFHDKLDKLRKNKKKIALKSIFIDQFELSP 281


>ref|YP_009354062.1| RNA polymerase alpha subunit (chloroplast) [Rehmannia henryi]
 ref|YP_009354149.1| RNA polymerase alpha subunit (chloroplast) [Rehmannia solanifolia]
 gb|AQZ40592.1| RNA polymerase alpha subunit (chloroplast) [Rehmannia henryi]
 gb|AQZ40680.1| RNA polymerase alpha subunit (chloroplast) [Rehmannia solanifolia]
          Length = 335

 Score =  319 bits (818), Expect = e-107
 Identities = 159/177 (89%), Positives = 161/177 (90%)
 Frame = -1

Query: 532 DASICVRGPGYVTAQDMILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHN 353
           DASICVRGPGYVTAQD+ILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHN
Sbjct: 105 DASICVRGPGYVTAQDIILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHN 164

Query: 352 FQDGSYPLDAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 173
           FQDGSYPLDAVFMPVRNVNHSIHSY  GNEKQEILFLEIWTNGSLTPKEALHEASRNLID
Sbjct: 165 FQDGSYPLDAVFMPVRNVNHSIHSY--GNEKQEILFLEIWTNGSLTPKEALHEASRNLID 222

Query: 172 LFIPFLHKEEENLPLEDNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
           LFIPFLHKEEENLPLEDNQHMVPLSPFTFH+              KSIFIDQFELSP
Sbjct: 223 LFIPFLHKEEENLPLEDNQHMVPLSPFTFHDKLDKLRKNKKKIALKSIFIDQFELSP 279


>gb|AVM82710.1| RNA polymerase alpha subunit (chloroplast) [Podranea ricasoliana]
          Length = 337

 Score =  318 bits (815), Expect = e-107
 Identities = 155/177 (87%), Positives = 159/177 (89%)
 Frame = -1

Query: 532 DASICVRGPGYVTAQDMILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHN 353
           DASICVRGPGYVT QD+ILPPYVEI+DNTQHIASLTEPINLCIGLEIERNRGYL KMPHN
Sbjct: 105 DASICVRGPGYVTTQDIILPPYVEIVDNTQHIASLTEPINLCIGLEIERNRGYLRKMPHN 164

Query: 352 FQDGSYPLDAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 173
           FQDGSYP+DAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID
Sbjct: 165 FQDGSYPIDAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 224

Query: 172 LFIPFLHKEEENLPLEDNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
           LFIPFLHKEEENLPLEDNQH VPLSPFTFH+              KSIFIDQ ELSP
Sbjct: 225 LFIPFLHKEEENLPLEDNQHTVPLSPFTFHDKLDKLRKNKKKIALKSIFIDQSELSP 281


>gb|AKZ23818.1| RNA polymerase alpha subunit (plastid) [Verbena hastata]
          Length = 331

 Score =  318 bits (814), Expect = e-107
 Identities = 155/177 (87%), Positives = 160/177 (90%)
 Frame = -1

Query: 532 DASICVRGPGYVTAQDMILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHN 353
           DASICVRGPGYVTAQD+ILPPYVEIIDNTQHIASLTEP+NLCIGLEIERNRGYL KMPHN
Sbjct: 105 DASICVRGPGYVTAQDIILPPYVEIIDNTQHIASLTEPMNLCIGLEIERNRGYLRKMPHN 164

Query: 352 FQDGSYPLDAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 173
           FQDGSYP+DA+FMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID
Sbjct: 165 FQDGSYPIDAIFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 224

Query: 172 LFIPFLHKEEENLPLEDNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
           LFIPFLHKEEENLPLEDNQH V LSPFTFH+              KSIFIDQFELSP
Sbjct: 225 LFIPFLHKEEENLPLEDNQHTVCLSPFTFHDKLDKLRTNKKKIALKSIFIDQFELSP 281


>ref|YP_009309483.1| RNA polymerase alpha subunit (chloroplast) [Paulownia coreana]
 ref|YP_009309570.1| RNA polymerase alpha subunit (chloroplast) [Paulownia tomentosa]
 gb|AKM21544.1| RNA polymerase alpha subunit (chloroplast) [Paulownia coreana]
 gb|AKM21631.1| RNA polymerase alpha subunit (chloroplast) [Paulownia tomentosa]
          Length = 337

 Score =  318 bits (814), Expect = e-107
 Identities = 155/177 (87%), Positives = 160/177 (90%)
 Frame = -1

Query: 532 DASICVRGPGYVTAQDMILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHN 353
           DASICVRGPGYVTAQD+ILPPYVEI+DNTQHIASLTEPINLCIGLEIE+NRGYLIKMPHN
Sbjct: 105 DASICVRGPGYVTAQDIILPPYVEIVDNTQHIASLTEPINLCIGLEIEKNRGYLIKMPHN 164

Query: 352 FQDGSYPLDAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 173
           FQDGSYP+DAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID
Sbjct: 165 FQDGSYPIDAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 224

Query: 172 LFIPFLHKEEENLPLEDNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
           LFIPFL KEEENLPLEDNQH VPLSPFTFH+              KSIFIDQ ELSP
Sbjct: 225 LFIPFLDKEEENLPLEDNQHTVPLSPFTFHDKLNKLRKNKKKIALKSIFIDQSELSP 281


>ref|YP_009316344.1| RNA polymerase alpha subunit (plastid) [Castilleja paramensis]
 gb|ANJ04304.1| RNA polymerase alpha subunit (plastid) [Castilleja paramensis]
          Length = 337

 Score =  316 bits (810), Expect = e-106
 Identities = 152/177 (85%), Positives = 159/177 (89%)
 Frame = -1

Query: 532 DASICVRGPGYVTAQDMILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHN 353
           DASICVRGPGYVTAQD+ILPPYVEI+DN QHIASLTEP+NLCIGLEIERNRGYL+KMPHN
Sbjct: 105 DASICVRGPGYVTAQDIILPPYVEIVDNIQHIASLTEPVNLCIGLEIERNRGYLLKMPHN 164

Query: 352 FQDGSYPLDAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 173
           FQDGSYP+DAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID
Sbjct: 165 FQDGSYPIDAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 224

Query: 172 LFIPFLHKEEENLPLEDNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
           LFIPFLHKEEENL  EDN+H +PLSPFTFHE              KSIFIDQFELSP
Sbjct: 225 LFIPFLHKEEENLLFEDNEHTIPLSPFTFHEKLDKLRKNKKKIALKSIFIDQFELSP 281


>gb|ALO62155.1| RNA polymerase alpha subunit (chloroplast) [Crescentia cujete]
          Length = 337

 Score =  315 bits (808), Expect = e-106
 Identities = 154/177 (87%), Positives = 159/177 (89%)
 Frame = -1

Query: 532 DASICVRGPGYVTAQDMILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHN 353
           DASICVRGPGYVTAQD+ILPPYVEI+D TQHIASLTEPI+LCIGLEIERNRGYL KMPHN
Sbjct: 105 DASICVRGPGYVTAQDIILPPYVEIVDKTQHIASLTEPIHLCIGLEIERNRGYLRKMPHN 164

Query: 352 FQDGSYPLDAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 173
           FQDGSYP+DAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID
Sbjct: 165 FQDGSYPIDAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 224

Query: 172 LFIPFLHKEEENLPLEDNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
           LFIPFLHKEEENLPLEDNQH VPLSPFTFH+              KSIFIDQ ELSP
Sbjct: 225 LFIPFLHKEEENLPLEDNQHTVPLSPFTFHDKLDKLRKNKKKIALKSIFIDQSELSP 281


>ref|YP_009462374.1| RNA polymerase alpha subunit (chloroplast) [Schrebera arborea]
 gb|AUT85225.1| RNA polymerase alpha subunit (chloroplast) [Schrebera arborea]
          Length = 337

 Score =  314 bits (805), Expect = e-105
 Identities = 152/177 (85%), Positives = 158/177 (89%)
 Frame = -1

Query: 532 DASICVRGPGYVTAQDMILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHN 353
           DASICVRGPGYVTAQD+ILPPYVEI+DNTQHIASLTEPI+LCIGL+IERNRGYLIKMPHN
Sbjct: 105 DASICVRGPGYVTAQDIILPPYVEIVDNTQHIASLTEPIDLCIGLQIERNRGYLIKMPHN 164

Query: 352 FQDGSYPLDAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 173
           FQDGSYP+DAVFMPVRN NHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEA RNLID
Sbjct: 165 FQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEACRNLID 224

Query: 172 LFIPFLHKEEENLPLEDNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
           LFIPFLHKEEENLPLEDNQHMVPLSP TFH+              KSIFIDQ E SP
Sbjct: 225 LFIPFLHKEEENLPLEDNQHMVPLSPLTFHDKLDKLRKNKKKIALKSIFIDQSEFSP 281


>ref|YP_009309657.1| RNA polymerase alpha subunit (chloroplast) [Scrophularia
           buergeriana]
 gb|AKM21717.1| RNA polymerase alpha subunit (chloroplast) [Scrophularia
           buergeriana]
          Length = 337

 Score =  314 bits (804), Expect = e-105
 Identities = 153/177 (86%), Positives = 159/177 (89%)
 Frame = -1

Query: 532 DASICVRGPGYVTAQDMILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHN 353
           DASICVRGPGYVTAQD+ILPPYVEI+DNTQHIASLTEPINLCIGLEIERNRGYL+KMPHN
Sbjct: 105 DASICVRGPGYVTAQDIILPPYVEIVDNTQHIASLTEPINLCIGLEIERNRGYLLKMPHN 164

Query: 352 FQDGSYPLDAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 173
           FQDGSYP+DAVFMPVRNVNHSIHSYGN NEKQEILFLEIWTNGSLTPKEALHEASRNLID
Sbjct: 165 FQDGSYPIDAVFMPVRNVNHSIHSYGNENEKQEILFLEIWTNGSLTPKEALHEASRNLID 224

Query: 172 LFIPFLHKEEENLPLEDNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
           LFIPFLHKEEENLPLEDNQH V LSPF+FH+              KSIFIDQ ELSP
Sbjct: 225 LFIPFLHKEEENLPLEDNQHTVSLSPFSFHDKFDKLRKNKKKIALKSIFIDQSELSP 281


>gb|AUT84085.1| RNA polymerase alpha subunit (chloroplast) [Fontanesia
           phillyreoides subsp. fortunei]
          Length = 337

 Score =  313 bits (803), Expect = e-105
 Identities = 152/177 (85%), Positives = 158/177 (89%)
 Frame = -1

Query: 532 DASICVRGPGYVTAQDMILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHN 353
           DASICVRGPGYVTAQD+ILPPYVEI+DNTQHIASLTEPI+LCIGL+IERNRGYLIKMPHN
Sbjct: 105 DASICVRGPGYVTAQDIILPPYVEIVDNTQHIASLTEPIDLCIGLQIERNRGYLIKMPHN 164

Query: 352 FQDGSYPLDAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 173
           FQDGSYP+DAVFMPVRN NHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEA RNLID
Sbjct: 165 FQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEACRNLID 224

Query: 172 LFIPFLHKEEENLPLEDNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
           LFIPFLHKEEENLPLEDNQH VPLSP TFH+              KSIFIDQ ELSP
Sbjct: 225 LFIPFLHKEEENLPLEDNQHTVPLSPLTFHDKLDKLRKKKKKKALKSIFIDQSELSP 281


>ref|YP_009443978.1| RNA polymerase alpha subunit (chloroplast) [Forsythia suspensa]
 ref|YP_009462023.1| RNA polymerase alpha subunit (chloroplast) [Forsythia x intermedia]
 gb|ATU07198.1| RNA polymerase alpha subunit (chloroplast) [Forsythia suspensa]
 gb|AUT84260.1| RNA polymerase alpha subunit (chloroplast) [Forsythia x intermedia]
 gb|AVE14973.1| RNA polymerase alpha subunit (chloroplast) [Forsythia saxatilis]
          Length = 337

 Score =  313 bits (803), Expect = e-105
 Identities = 152/177 (85%), Positives = 158/177 (89%)
 Frame = -1

Query: 532 DASICVRGPGYVTAQDMILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHN 353
           DASICVRGPGYVTAQD+ILPPYVEI+DNTQHIASLTEPI+LCIGL+IERNRGYLIKMPHN
Sbjct: 105 DASICVRGPGYVTAQDIILPPYVEIVDNTQHIASLTEPIDLCIGLQIERNRGYLIKMPHN 164

Query: 352 FQDGSYPLDAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 173
           FQDGSYP+DAVFMPVRN NHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEA RNLID
Sbjct: 165 FQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEACRNLID 224

Query: 172 LFIPFLHKEEENLPLEDNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
           LFIPFLHKEEENLPLEDNQH VPLSP TFH+              KSIFIDQ ELSP
Sbjct: 225 LFIPFLHKEEENLPLEDNQHTVPLSPLTFHDKFDKLRKNKKKKALKSIFIDQSELSP 281


>gb|ANX10198.1| RNA polymerase alpha subunit (chloroplast) [Triphysaria versicolor]
          Length = 337

 Score =  313 bits (802), Expect = e-105
 Identities = 151/177 (85%), Positives = 158/177 (89%)
 Frame = -1

Query: 532 DASICVRGPGYVTAQDMILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHN 353
           DASICVRGPGYVTAQD+ILPPYVEI+DN QHIASLTEP+NLCI LEIERNRGYL+KMPHN
Sbjct: 105 DASICVRGPGYVTAQDIILPPYVEIVDNIQHIASLTEPVNLCIQLEIERNRGYLLKMPHN 164

Query: 352 FQDGSYPLDAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 173
           FQDGSYP+DAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID
Sbjct: 165 FQDGSYPIDAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 224

Query: 172 LFIPFLHKEEENLPLEDNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
           LFIPFLHKEEENL  EDN+H +PLSPFTFHE              KSIFIDQFELSP
Sbjct: 225 LFIPFLHKEEENLLFEDNEHTIPLSPFTFHEKLDKLRKNKKKIALKSIFIDQFELSP 281


>ref|YP_009117253.1| RNA polymerase alpha subunit (chloroplast) [Premna microphylla]
 gb|AJE28407.1| RNA polymerase alpha subunit (chloroplast) [Premna microphylla]
          Length = 336

 Score =  313 bits (801), Expect = e-105
 Identities = 152/177 (85%), Positives = 160/177 (90%)
 Frame = -1

Query: 532 DASICVRGPGYVTAQDMILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHN 353
           DASICVRGPGYVTAQD+ILPPYVEI+DNTQHIASLTEPI+LCIGLEIERNRGYL+KMP+N
Sbjct: 105 DASICVRGPGYVTAQDIILPPYVEIVDNTQHIASLTEPISLCIGLEIERNRGYLVKMPNN 164

Query: 352 FQDGSYPLDAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 173
           FQDGSYP+DAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID
Sbjct: 165 FQDGSYPIDAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 224

Query: 172 LFIPFLHKEEENLPLEDNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
           LFIPFL+KEEENLPLEDNQH VPLSPF FH+              KSIFIDQ ELSP
Sbjct: 225 LFIPFLYKEEENLPLEDNQHTVPLSPFPFHDKLDKARKNKKKIALKSIFIDQSELSP 281


>ref|YP_008964066.1| RNA polymerase subunit alpha [Ajuga reptans]
 gb|AHA84937.1| RNA polymerase subunit alpha (plastid) [Ajuga reptans]
          Length = 337

 Score =  313 bits (801), Expect = e-105
 Identities = 151/177 (85%), Positives = 158/177 (89%)
 Frame = -1

Query: 532 DASICVRGPGYVTAQDMILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHN 353
           DASICVRGPGYVTAQD+ILPPYVEI+DNTQHIASLTEPINLCIGL+IERNRGYLIKMPH 
Sbjct: 105 DASICVRGPGYVTAQDIILPPYVEIVDNTQHIASLTEPINLCIGLKIERNRGYLIKMPHK 164

Query: 352 FQDGSYPLDAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 173
           FQDGSYP+DAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSL PKEALHEASRNLID
Sbjct: 165 FQDGSYPIDAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLNPKEALHEASRNLID 224

Query: 172 LFIPFLHKEEENLPLEDNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
           LFIPFL+KEEENLPLEDNQH  PLSPFTFH+              +SIFIDQ ELSP
Sbjct: 225 LFIPFLYKEEENLPLEDNQHTAPLSPFTFHDKFDKVRKNKKKIALQSIFIDQSELSP 281


>gb|AKZ23819.1| RNA polymerase alpha subunit (plastid) [Teucrium canadense]
          Length = 350

 Score =  313 bits (802), Expect = e-105
 Identities = 153/177 (86%), Positives = 158/177 (89%)
 Frame = -1

Query: 532 DASICVRGPGYVTAQDMILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHN 353
           DASICVRGPGYVTAQD+ILPPYVEI+DNTQHIASLTEPINLCIGLEIERNRGYLIKMPHN
Sbjct: 105 DASICVRGPGYVTAQDIILPPYVEIVDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHN 164

Query: 352 FQDGSYPLDAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 173
            Q GSYP+DAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID
Sbjct: 165 VQGGSYPIDAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 224

Query: 172 LFIPFLHKEEENLPLEDNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
           LFIPFL+KEEENLPLEDNQH  PLSPFTFH+              KSIFIDQ ELSP
Sbjct: 225 LFIPFLYKEEENLPLEDNQHTAPLSPFTFHDKLDKVRKNKKKIALKSIFIDQSELSP 281


>ref|YP_009459731.1| RNA polymerase alpha subunit (chloroplast) [Scrophularia henryi]
 gb|AUT13377.1| RNA polymerase alpha subunit (chloroplast) [Scrophularia henryi]
          Length = 337

 Score =  312 bits (800), Expect = e-104
 Identities = 152/177 (85%), Positives = 158/177 (89%)
 Frame = -1

Query: 532 DASICVRGPGYVTAQDMILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHN 353
           DASICVRGPGYVTAQD+ILPPYVEI+DNTQHIASLTEPIN CIGLEIERNRGYL+KMPHN
Sbjct: 105 DASICVRGPGYVTAQDIILPPYVEIVDNTQHIASLTEPINFCIGLEIERNRGYLLKMPHN 164

Query: 352 FQDGSYPLDAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 173
           FQDGSYP+DAVFMPVRNVNHSIHSYGN NEKQEILFLEIWTNGSLTPKEALHEASRNLID
Sbjct: 165 FQDGSYPIDAVFMPVRNVNHSIHSYGNENEKQEILFLEIWTNGSLTPKEALHEASRNLID 224

Query: 172 LFIPFLHKEEENLPLEDNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
           LFIPFLHKEEENLPLEDNQH V LSPF+FH+              KSIFIDQ ELSP
Sbjct: 225 LFIPFLHKEEENLPLEDNQHTVSLSPFSFHDKFDKLRKNKKKIALKSIFIDQSELSP 281


>ref|YP_009309906.1| RNA polymerase alpha subunit (chloroplast) [Abeliophyllum
           distichum]
 gb|ALZ50049.1| RNA polymerase alpha subunit (chloroplast) [Abeliophyllum
           distichum]
          Length = 337

 Score =  312 bits (799), Expect = e-104
 Identities = 151/177 (85%), Positives = 158/177 (89%)
 Frame = -1

Query: 532 DASICVRGPGYVTAQDMILPPYVEIIDNTQHIASLTEPINLCIGLEIERNRGYLIKMPHN 353
           DASICVRGPGYVTAQD+ILPPYV+I+DNTQHIASLTEPI+LCIGL+IERNRGYLIKMPHN
Sbjct: 105 DASICVRGPGYVTAQDIILPPYVKIVDNTQHIASLTEPIDLCIGLQIERNRGYLIKMPHN 164

Query: 352 FQDGSYPLDAVFMPVRNVNHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEASRNLID 173
           FQDGSYP+DAVFMPVRN NHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEA RNLID
Sbjct: 165 FQDGSYPIDAVFMPVRNANHSIHSYGNGNEKQEILFLEIWTNGSLTPKEALHEACRNLID 224

Query: 172 LFIPFLHKEEENLPLEDNQHMVPLSPFTFHEXXXXXXXXXXXXXXKSIFIDQFELSP 2
           LFIPFLHKEEENLPLEDNQH VPLSP TFH+              KSIFIDQ ELSP
Sbjct: 225 LFIPFLHKEEENLPLEDNQHTVPLSPLTFHDKLDKLRKNKKKKALKSIFIDQSELSP 281