BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00011216
         (1311 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011093738.1| CRM-domain containing factor CFM3, chloropla...   495   e-164
gb|PIN02731.1| Poly(A)-specific exoribonuclease PARN [Handroanth...   472   e-156
ref|XP_012846341.1| PREDICTED: chloroplastic group IIA intron sp...   399   e-128
ref|XP_022888243.1| CRM-domain containing factor CFM3, chloropla...   374   e-122
ref|XP_022888241.1| CRM-domain containing factor CFM3, chloropla...   374   e-122
ref|XP_022888242.1| CRM-domain containing factor CFM3, chloropla...   374   e-121
ref|XP_022888240.1| CRM-domain containing factor CFM3, chloropla...   374   e-118
ref|XP_022888239.1| CRM-domain containing factor CFM3, chloropla...   374   e-118
ref|XP_016477563.1| PREDICTED: CRM-domain containing factor CFM3...   280   1e-85
ref|XP_019249130.1| PREDICTED: CRM-domain containing factor CFM3...   283   7e-84
ref|XP_009799178.1| PREDICTED: chloroplastic group IIA intron sp...   280   1e-82
gb|OIS99894.1| crm-domain containing factor cfm3, chloroplasticm...   283   6e-82
gb|OVA05797.1| RNA-binding [Macleaya cordata]                         263   1e-75
gb|KZV46321.1| hypothetical protein F511_21403 [Dorcoceras hygro...   257   1e-74
ref|XP_021804878.1| CRM-domain containing factor CFM3, chloropla...   258   1e-73
ref|XP_022147610.1| CRM-domain containing factor CFM3, chloropla...   254   1e-72
ref|XP_006357699.1| PREDICTED: chloroplastic group IIA intron sp...   251   6e-72
ref|XP_011659986.1| PREDICTED: chloroplastic group IIA intron sp...   250   2e-71
ref|XP_008242355.1| PREDICTED: CRM-domain containing factor CFM3...   251   3e-71
ref|XP_008450865.1| PREDICTED: CRM-domain containing factor CFM3...   249   6e-71

>ref|XP_011093738.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial
            [Sesamum indicum]
          Length = 887

 Score =  495 bits (1274), Expect = e-164
 Identities = 265/427 (62%), Positives = 307/427 (71%), Gaps = 17/427 (3%)
 Frame = +1

Query: 82   KTHSLKGFGARKPKISCCQQTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLKTPSL 261
            +T SL+ F  RK +ISCCQ+TV+++ ET+      KKKRKPRPSFLEQVQ+KWS++TP L
Sbjct: 31   QTRSLQSFRPRKLRISCCQKTVQLENETKQKAYPVKKKRKPRPSFLEQVQSKWSIRTPPL 90

Query: 262  RQNFPWQEQENGDTNQQFQAQTXXXXXXXXXXXXXXXXXXXXXXXXXHTKIKSTLAPWVH 441
            R+NFPWQE+E+G TNQ+F+AQ                              KS LAPWVH
Sbjct: 91   RENFPWQEEESGGTNQEFEAQRSVFSRDVSSEEESEKSSCVSEPERSQRINKSILAPWVH 150

Query: 442  GNEPRKKVFNSKGSIKSQEKVHQT--------EHLQNEEPMVSVIQGSDDLVKK------ 579
            GN  RK VFNS+GS   QE VH          EH  NE+P+VSV+ G +DLVK+      
Sbjct: 151  GNG-RKNVFNSEGSRNIQENVHPKDDGLHGIQEHWPNEDPLVSVVVGYEDLVKEVTENGR 209

Query: 580  ---KFGEFDEIPIGLPEKNENLGVDKSKNVTSMEDLSISYRVTSSVKYSAGADDLKRLPW 750
               + GEFD+IPIGL EKNE LG ++S++  +MEDLS      SS K S  A+DL RLPW
Sbjct: 210  SEEEVGEFDDIPIGLSEKNEILGNEESEDFAAMEDLSTISLEISSEKCSNDANDLMRLPW 269

Query: 751  ERKINEEFVKENKLRNRNTELAERVIPEHELKRLRNVSLRMVERMKVGAAGVTQELVDAI 930
            ERKI+EEFVKE K RNRNTELAER+IPE ELKRLRNVSLRMVERMKVGAAGVTQ LVDAI
Sbjct: 270  ERKIDEEFVKEEKSRNRNTELAERLIPEPELKRLRNVSLRMVERMKVGAAGVTQALVDAI 329

Query: 931  HEKWKDDEVVKLKFEGPPSMNMKRTHEFLESRTGGLVIWRSGSLVVLYRGMTYKLDCIKS 1110
            HEKWK +EVVKLKFEGPPS NM+RTHE LESRTGGLVIWRSGS VVLYRGMTYKLDC+KS
Sbjct: 330  HEKWKHEEVVKLKFEGPPSKNMRRTHEILESRTGGLVIWRSGSSVVLYRGMTYKLDCVKS 389

Query: 1111 YSKHVQADSGAIGSSREDSPTSIKVDRVNGAAESPRVYNSNYCSNLSEEEQVXXXXXXXX 1290
            YSKHVQ D+GA GSS+EDSP SIKV R+NGAAES  VYNS Y ++LS+EEQ+        
Sbjct: 390  YSKHVQGDAGASGSSQEDSPESIKVKRLNGAAESFGVYNSKYYNSLSQEEQMDLSELDLL 449

Query: 1291 XXXXGPR 1311
                GPR
Sbjct: 450  LHELGPR 456


>gb|PIN02731.1| Poly(A)-specific exoribonuclease PARN [Handroanthus impetiginosus]
          Length = 864

 Score =  472 bits (1215), Expect = e-156
 Identities = 264/446 (59%), Positives = 302/446 (67%), Gaps = 32/446 (7%)
 Frame = +1

Query: 70   KFHPKTHSLKGFGARKPKISCCQQTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLK 249
            KFH +THSL G+G RK +ISC  QTV++D E Q+ TNL KK RKPRPSFLEQVQNKWS+K
Sbjct: 27   KFHSQTHSLHGYGIRKLRISCSSQTVQLDNEAQNKTNLVKK-RKPRPSFLEQVQNKWSVK 85

Query: 250  TPSLRQNFPWQEQENGDTNQQFQAQTXXXXXXXXXXXXXXXXXXXXXXXXXHTKIKSTLA 429
            TPSLR+NFPWQEQ +GDTN++FQ Q+                           K KSTLA
Sbjct: 86   TPSLRENFPWQEQGSGDTNEEFQIQSEKESEPNSSVSEPVSSP---------VKTKSTLA 136

Query: 430  PWVHGNEPRKKVFNSKGSIKSQEKVHQTEHLQNEEPMVSVIQGSDDLVK---------KK 582
            PWVHGN+PRK +F+S+G+ K QE VHQ +   +      + Q S+DLVK         +K
Sbjct: 137  PWVHGNKPRKNLFSSEGTRKFQENVHQKDQALDGFHEHFLDQVSEDLVKGVVLDGTSEEK 196

Query: 583  FGEFDEIPIGLPEKNENLGVDKSKN-VTSMEDLSISYRVTSSVKYSAGADDLKRLPWERK 759
             GEFD+IPIGLPEKN+ LG D+ KN VT ME  S  Y      K SA A+D KRLPWE K
Sbjct: 197  CGEFDKIPIGLPEKNDLLGNDEGKNDVTFMEGSSTIYPEVIGKKCSADANDSKRLPWEGK 256

Query: 760  INEEFVKENK----------------------LRNRNTELAERVIPEHELKRLRNVSLRM 873
            I+  FVKE K                      L++R  ELAER+IPE ELKRLRN+SLRM
Sbjct: 257  IDGGFVKEEKANDLNRLPWEGKIDGESVKEEKLQSRKMELAERLIPEPELKRLRNLSLRM 316

Query: 874  VERMKVGAAGVTQELVDAIHEKWKDDEVVKLKFEGPPSMNMKRTHEFLESRTGGLVIWRS 1053
            VERMKVGAAGVTQ LVDAIHEKWK DEVVKLKFEGPPS NMKRTHE LESRTGGLVIWRS
Sbjct: 317  VERMKVGAAGVTQALVDAIHEKWKADEVVKLKFEGPPSKNMKRTHEILESRTGGLVIWRS 376

Query: 1054 GSLVVLYRGMTYKLDCIKSYSKHVQADSGAIGSSREDSPTSIKVDRVNGAAESPRVYNSN 1233
            GS VVLYRGMTYK DC+KSYSKH+QAD+GA  SSREDS  S  V   NGAAES R++NS 
Sbjct: 377  GSSVVLYRGMTYKFDCVKSYSKHIQADAGASESSREDSSESSSVRCSNGAAESSRLFNSK 436

Query: 1234 YCSNLSEEEQVXXXXXXXXXXXXGPR 1311
            Y S+LSEEEQ+            GPR
Sbjct: 437  YYSSLSEEEQMDLSELNLLLDELGPR 462


>ref|XP_012846341.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Erythranthe guttata]
 gb|EYU29891.1| hypothetical protein MIMGU_mgv1a001353mg [Erythranthe guttata]
          Length = 835

 Score =  399 bits (1026), Expect = e-128
 Identities = 221/416 (53%), Positives = 272/416 (65%), Gaps = 2/416 (0%)
 Frame = +1

Query: 70   KFHPKTHSLKGFGARKPKISCCQQTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLK 249
            KF+P+T SL      +  I+CCQQTV++D ET H   L KKKRKPRPSF+EQ+QNKWSLK
Sbjct: 28   KFNPRTRSLNS----RKIINCCQQTVQLDNETLHTITLVKKKRKPRPSFVEQIQNKWSLK 83

Query: 250  TPSLRQNFPWQEQENGDTNQQFQAQTXXXXXXXXXXXXXXXXXXXXXXXXXH--TKIKST 423
            TPSLR+NFPWQE++     ++F+AQT                             K KS 
Sbjct: 84   TPSLRENFPWQEEQ-----EEFRAQTTPFSQNVSSAKEIEVSVSVSERVVVTHVKKPKSI 138

Query: 424  LAPWVHGNEPRKKVFNSKGSIKSQEKVHQTEHLQNEEPMVSVIQGSDDLVKKKFGEFDEI 603
            LAPWVHGNE R+++  S+GS K+QE V   +        V    G  D   +KF EFDE 
Sbjct: 139  LAPWVHGNESRRELPVSEGSTKNQENVRTEKEFLVSPVRVLAEYGKSD---EKFIEFDET 195

Query: 604  PIGLPEKNENLGVDKSKNVTSMEDLSISYRVTSSVKYSAGADDLKRLPWERKINEEFVKE 783
            PI L EKN             +E+ + + R  + +K S   D L RLPWERK +EEFVK+
Sbjct: 196  PIRLTEKN-----------AVVENSATTDRTATRIKPSVNGDGLNRLPWERKNDEEFVKK 244

Query: 784  NKLRNRNTELAERVIPEHELKRLRNVSLRMVERMKVGAAGVTQELVDAIHEKWKDDEVVK 963
            +KLR  +T LAE ++PEHELKRLRNVSLRMVER+KVGAAGVTQ LVD+IH+KWK++EVVK
Sbjct: 245  DKLRKTSTSLAEGLVPEHELKRLRNVSLRMVERIKVGAAGVTQALVDSIHDKWKNEEVVK 304

Query: 964  LKFEGPPSMNMKRTHEFLESRTGGLVIWRSGSLVVLYRGMTYKLDCIKSYSKHVQADSGA 1143
            LKF GPPS NMKRTHE LE RTGGLVIWRSGS +VLYRGMTY LDC+KSY+KHV+ D+  
Sbjct: 305  LKFLGPPSKNMKRTHEILERRTGGLVIWRSGSSLVLYRGMTYNLDCVKSYTKHVEDDAEE 364

Query: 1144 IGSSREDSPTSIKVDRVNGAAESPRVYNSNYCSNLSEEEQVXXXXXXXXXXXXGPR 1311
            + SS+EDSP  IKV +  G  ES   ++S+Y +NLSEEEQ+            GPR
Sbjct: 365  LESSKEDSPQRIKVKKRPG--ESSGTFDSDYFNNLSEEEQMDLSEMNLLLDELGPR 418


>ref|XP_022888243.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial-like
            isoform X3 [Olea europaea var. sylvestris]
          Length = 523

 Score =  374 bits (961), Expect = e-122
 Identities = 214/436 (49%), Positives = 270/436 (61%), Gaps = 23/436 (5%)
 Frame = +1

Query: 73   FHPKTHSLKGFGARKPKISCCQQTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLKT 252
            FH + H    F  +K KISC +         QH TN  KKKRKPRPSF+E++Q+KWSLK 
Sbjct: 27   FHSQPHCSNRFRGQKLKISCTKSV-------QHETNPVKKKRKPRPSFIEKIQDKWSLKI 79

Query: 253  PSLRQNFPWQE--QENGDTNQQFQAQTXXXXXXXXXXXXXXXXXXXXXXXXXHTKIKSTL 426
            PSLR+ FPW+E  QE+ D+ Q ++                             ++ KS L
Sbjct: 80   PSLREKFPWEEHKQESDDSIQDYEEHLLPLSEGVVTVTVSEDNTSGDSSASSSSRNKSIL 139

Query: 427  APWVHGNEPRKKVFNSKGSIKSQEKVHQ--------TEHLQNEEPMVSVIQGSDDLVK-- 576
            APWVHGN+PRK + +S+ + K QE+ +         +EH +N+E   SV++ S DL+K  
Sbjct: 140  APWVHGNKPRKDLPDSQATEKIQEESNHRGQNLDGFSEHCKNDEAFGSVVEDSGDLIKGV 199

Query: 577  -------KKFGEFDEIPIGLPEKNENLGVDKSKNVTSMEDLSISYRVTSSVKYSAGADDL 735
                   +  G+ D IPIGL EK E L  D+S++   +ED     +  SS K S    D 
Sbjct: 200  KLDCNCDETSGKVDTIPIGLSEKYEILIEDESEDAFFVEDSRSISQEFSSKKGSDDVSDS 259

Query: 736  KRLPWERKINEEFVKENKLRNRNTELAERVIPEHELKRLRNVSLRMVERMKVGAAGVTQE 915
             RLPW+R  NE+ VKE KLR  NTELAE++IPE ELKRLRNV+LRMVERMKVGAAG+TQ 
Sbjct: 260  MRLPWQRGTNEDPVKEEKLRKSNTELAEKLIPEPELKRLRNVALRMVERMKVGAAGITQA 319

Query: 916  LVDAIHEKWKDDEVVKLKFEGPPSMNMKRTHEFLESRTGGLVIWRSGSLVVLYRGMTYKL 1095
            L DAIH KWKD+E+VKLKFEGPPS NMKRTHE LE+RTGGLVIWRSGS VVLYRGM+Y+L
Sbjct: 320  LTDAIHAKWKDEEIVKLKFEGPPSKNMKRTHEILEARTGGLVIWRSGSSVVLYRGMSYQL 379

Query: 1096 DCIKSYSKHVQADSGAIGSSREDSPTSI----KVDRVNGAAESPRVYNSNYCSNLSEEEQ 1263
            DC+++YSK +QAD  A  SS  DS   +     V  ++GAAES + Y S Y + LSEEE 
Sbjct: 380  DCVQAYSKRIQADIEARSSS--DSVNDVTQCGNVKLLSGAAESSQNYTSKYLNGLSEEEL 437

Query: 1264 VXXXXXXXXXXXXGPR 1311
            +            GPR
Sbjct: 438  MDLSELNLLLDELGPR 453


>ref|XP_022888241.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial-like
            isoform X1 [Olea europaea var. sylvestris]
          Length = 558

 Score =  374 bits (961), Expect = e-122
 Identities = 214/436 (49%), Positives = 270/436 (61%), Gaps = 23/436 (5%)
 Frame = +1

Query: 73   FHPKTHSLKGFGARKPKISCCQQTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLKT 252
            FH + H    F  +K KISC +         QH TN  KKKRKPRPSF+E++Q+KWSLK 
Sbjct: 27   FHSQPHCSNRFRGQKLKISCTKSV-------QHETNPVKKKRKPRPSFIEKIQDKWSLKI 79

Query: 253  PSLRQNFPWQE--QENGDTNQQFQAQTXXXXXXXXXXXXXXXXXXXXXXXXXHTKIKSTL 426
            PSLR+ FPW+E  QE+ D+ Q ++                             ++ KS L
Sbjct: 80   PSLREKFPWEEHKQESDDSIQDYEEHLLPLSEGVVTVTVSEDNTSGDSSASSSSRNKSIL 139

Query: 427  APWVHGNEPRKKVFNSKGSIKSQEKVHQ--------TEHLQNEEPMVSVIQGSDDLVK-- 576
            APWVHGN+PRK + +S+ + K QE+ +         +EH +N+E   SV++ S DL+K  
Sbjct: 140  APWVHGNKPRKDLPDSQATEKIQEESNHRGQNLDGFSEHCKNDEAFGSVVEDSGDLIKGV 199

Query: 577  -------KKFGEFDEIPIGLPEKNENLGVDKSKNVTSMEDLSISYRVTSSVKYSAGADDL 735
                   +  G+ D IPIGL EK E L  D+S++   +ED     +  SS K S    D 
Sbjct: 200  KLDCNCDETSGKVDTIPIGLSEKYEILIEDESEDAFFVEDSRSISQEFSSKKGSDDVSDS 259

Query: 736  KRLPWERKINEEFVKENKLRNRNTELAERVIPEHELKRLRNVSLRMVERMKVGAAGVTQE 915
             RLPW+R  NE+ VKE KLR  NTELAE++IPE ELKRLRNV+LRMVERMKVGAAG+TQ 
Sbjct: 260  MRLPWQRGTNEDPVKEEKLRKSNTELAEKLIPEPELKRLRNVALRMVERMKVGAAGITQA 319

Query: 916  LVDAIHEKWKDDEVVKLKFEGPPSMNMKRTHEFLESRTGGLVIWRSGSLVVLYRGMTYKL 1095
            L DAIH KWKD+E+VKLKFEGPPS NMKRTHE LE+RTGGLVIWRSGS VVLYRGM+Y+L
Sbjct: 320  LTDAIHAKWKDEEIVKLKFEGPPSKNMKRTHEILEARTGGLVIWRSGSSVVLYRGMSYQL 379

Query: 1096 DCIKSYSKHVQADSGAIGSSREDSPTSI----KVDRVNGAAESPRVYNSNYCSNLSEEEQ 1263
            DC+++YSK +QAD  A  SS  DS   +     V  ++GAAES + Y S Y + LSEEE 
Sbjct: 380  DCVQAYSKRIQADIEARSSS--DSVNDVTQCGNVKLLSGAAESSQNYTSKYLNGLSEEEL 437

Query: 1264 VXXXXXXXXXXXXGPR 1311
            +            GPR
Sbjct: 438  MDLSELNLLLDELGPR 453


>ref|XP_022888242.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial-like
            isoform X2 [Olea europaea var. sylvestris]
          Length = 558

 Score =  374 bits (960), Expect = e-121
 Identities = 214/436 (49%), Positives = 270/436 (61%), Gaps = 23/436 (5%)
 Frame = +1

Query: 73   FHPKTHSLKGFGARKPKISCCQQTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLKT 252
            FH + H    F  +K KISC +         QH TN  KKKRKPRPSF+E++Q+KWSLK 
Sbjct: 27   FHSQPHFSNRFRGQKLKISCTKSV-------QHETNPVKKKRKPRPSFIEKIQDKWSLKI 79

Query: 253  PSLRQNFPWQE--QENGDTNQQFQAQTXXXXXXXXXXXXXXXXXXXXXXXXXHTKIKSTL 426
            PSLR+ FPW+E  QE+ D+ Q ++                             ++ KS L
Sbjct: 80   PSLREKFPWEEHKQESDDSIQDYEEHLLPLSEGVVTVTVSEDNTSGDSSASSSSRNKSIL 139

Query: 427  APWVHGNEPRKKVFNSKGSIKSQEKVHQ--------TEHLQNEEPMVSVIQGSDDLVK-- 576
            APWVHGN+PRK + +S+ + K QE+ +         +EH +N+E   SV++ S DL+K  
Sbjct: 140  APWVHGNKPRKDLPDSQATEKIQEESNHRGQNLDGFSEHCKNDEAFGSVVEDSGDLIKGV 199

Query: 577  -------KKFGEFDEIPIGLPEKNENLGVDKSKNVTSMEDLSISYRVTSSVKYSAGADDL 735
                   +  G+ D IPIGL EK E L  D+S++   +ED     +  SS K S    D 
Sbjct: 200  KLDCNCDETSGKVDTIPIGLSEKYEILIEDESEDAFFVEDSRSISQEFSSKKGSDDVSDS 259

Query: 736  KRLPWERKINEEFVKENKLRNRNTELAERVIPEHELKRLRNVSLRMVERMKVGAAGVTQE 915
             RLPW+R  NE+ VKE KLR  NTELAE++IPE ELKRLRNV+LRMVERMKVGAAG+TQ 
Sbjct: 260  MRLPWQRGTNEDPVKEEKLRKSNTELAEKLIPEPELKRLRNVALRMVERMKVGAAGITQA 319

Query: 916  LVDAIHEKWKDDEVVKLKFEGPPSMNMKRTHEFLESRTGGLVIWRSGSLVVLYRGMTYKL 1095
            L DAIH KWKD+E+VKLKFEGPPS NMKRTHE LE+RTGGLVIWRSGS VVLYRGM+Y+L
Sbjct: 320  LTDAIHAKWKDEEIVKLKFEGPPSKNMKRTHEILEARTGGLVIWRSGSSVVLYRGMSYQL 379

Query: 1096 DCIKSYSKHVQADSGAIGSSREDSPTSI----KVDRVNGAAESPRVYNSNYCSNLSEEEQ 1263
            DC+++YSK +QAD  A  SS  DS   +     V  ++GAAES + Y S Y + LSEEE 
Sbjct: 380  DCVQAYSKRIQADIEARSSS--DSVNDVTQCGNVKLLSGAAESSQNYTSKYLNGLSEEEL 437

Query: 1264 VXXXXXXXXXXXXGPR 1311
            +            GPR
Sbjct: 438  MDLSELNLLLDELGPR 453


>ref|XP_022888240.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial-like
            [Olea europaea var. sylvestris]
          Length = 891

 Score =  374 bits (961), Expect = e-118
 Identities = 214/436 (49%), Positives = 270/436 (61%), Gaps = 23/436 (5%)
 Frame = +1

Query: 73   FHPKTHSLKGFGARKPKISCCQQTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLKT 252
            FH + H    F  +K KISC +         QH TN  KKKRKPRPSF+E++Q+KWSLK 
Sbjct: 27   FHSQPHCSNRFRGQKLKISCTKSV-------QHETNPVKKKRKPRPSFIEKIQDKWSLKI 79

Query: 253  PSLRQNFPWQE--QENGDTNQQFQAQTXXXXXXXXXXXXXXXXXXXXXXXXXHTKIKSTL 426
            PSLR+ FPW+E  QE+ D+ Q ++                             ++ KS L
Sbjct: 80   PSLREKFPWEEHKQESDDSIQDYEEHLLPLSEGVVTVTVSEDNTSGDSSASSSSRNKSIL 139

Query: 427  APWVHGNEPRKKVFNSKGSIKSQEKVHQ--------TEHLQNEEPMVSVIQGSDDLVK-- 576
            APWVHGN+PRK + +S+ + K QE+ +         +EH +N+E   SV++ S DL+K  
Sbjct: 140  APWVHGNKPRKDLPDSQATEKIQEESNHRGQNLDGFSEHCKNDEAFGSVVEDSGDLIKGV 199

Query: 577  -------KKFGEFDEIPIGLPEKNENLGVDKSKNVTSMEDLSISYRVTSSVKYSAGADDL 735
                   +  G+ D IPIGL EK E L  D+S++   +ED     +  SS K S    D 
Sbjct: 200  KLDCNCDETSGKVDTIPIGLSEKYEILIEDESEDAFFVEDSRSISQEFSSKKGSDDVSDS 259

Query: 736  KRLPWERKINEEFVKENKLRNRNTELAERVIPEHELKRLRNVSLRMVERMKVGAAGVTQE 915
             RLPW+R  NE+ VKE KLR  NTELAE++IPE ELKRLRNV+LRMVERMKVGAAG+TQ 
Sbjct: 260  MRLPWQRGTNEDPVKEEKLRKSNTELAEKLIPEPELKRLRNVALRMVERMKVGAAGITQA 319

Query: 916  LVDAIHEKWKDDEVVKLKFEGPPSMNMKRTHEFLESRTGGLVIWRSGSLVVLYRGMTYKL 1095
            L DAIH KWKD+E+VKLKFEGPPS NMKRTHE LE+RTGGLVIWRSGS VVLYRGM+Y+L
Sbjct: 320  LTDAIHAKWKDEEIVKLKFEGPPSKNMKRTHEILEARTGGLVIWRSGSSVVLYRGMSYQL 379

Query: 1096 DCIKSYSKHVQADSGAIGSSREDSPTSI----KVDRVNGAAESPRVYNSNYCSNLSEEEQ 1263
            DC+++YSK +QAD  A  SS  DS   +     V  ++GAAES + Y S Y + LSEEE 
Sbjct: 380  DCVQAYSKRIQADIEARSSS--DSVNDVTQCGNVKLLSGAAESSQNYTSKYLNGLSEEEL 437

Query: 1264 VXXXXXXXXXXXXGPR 1311
            +            GPR
Sbjct: 438  MDLSELNLLLDELGPR 453


>ref|XP_022888239.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial-like
            [Olea europaea var. sylvestris]
          Length = 891

 Score =  374 bits (961), Expect = e-118
 Identities = 214/436 (49%), Positives = 270/436 (61%), Gaps = 23/436 (5%)
 Frame = +1

Query: 73   FHPKTHSLKGFGARKPKISCCQQTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLKT 252
            FH + H    F  +K KISC +         QH TN  KKKRKPRPSF+E++Q+KWSLK 
Sbjct: 27   FHSQPHCSNRFRGQKLKISCTKSV-------QHETNPVKKKRKPRPSFIEKIQDKWSLKI 79

Query: 253  PSLRQNFPWQE--QENGDTNQQFQAQTXXXXXXXXXXXXXXXXXXXXXXXXXHTKIKSTL 426
            PSLR+ FPW+E  QE+ D+ Q ++                             ++ KS L
Sbjct: 80   PSLREKFPWEEHKQESDDSIQDYEEHLLPLSEGVVTVTVSEDNTSGDSSASSSSRNKSIL 139

Query: 427  APWVHGNEPRKKVFNSKGSIKSQEKVHQ--------TEHLQNEEPMVSVIQGSDDLVK-- 576
            APWVHGN+PRK + +S+ + K QE+ +         +EH +N+E   SV++ S DL+K  
Sbjct: 140  APWVHGNKPRKDLPDSQATEKIQEESNHRGQNLDGFSEHCKNDEAFGSVVEDSGDLIKGV 199

Query: 577  -------KKFGEFDEIPIGLPEKNENLGVDKSKNVTSMEDLSISYRVTSSVKYSAGADDL 735
                   +  G+ D IPIGL EK E L  D+S++   +ED     +  SS K S    D 
Sbjct: 200  KLDCNCDETSGKVDTIPIGLSEKYEILIEDESEDAFFVEDSRSISQEFSSKKGSDDVSDS 259

Query: 736  KRLPWERKINEEFVKENKLRNRNTELAERVIPEHELKRLRNVSLRMVERMKVGAAGVTQE 915
             RLPW+R  NE+ VKE KLR  NTELAE++IPE ELKRLRNV+LRMVERMKVGAAG+TQ 
Sbjct: 260  MRLPWQRGTNEDPVKEEKLRKSNTELAEKLIPEPELKRLRNVALRMVERMKVGAAGITQA 319

Query: 916  LVDAIHEKWKDDEVVKLKFEGPPSMNMKRTHEFLESRTGGLVIWRSGSLVVLYRGMTYKL 1095
            L DAIH KWKD+E+VKLKFEGPPS NMKRTHE LE+RTGGLVIWRSGS VVLYRGM+Y+L
Sbjct: 320  LTDAIHAKWKDEEIVKLKFEGPPSKNMKRTHEILEARTGGLVIWRSGSSVVLYRGMSYQL 379

Query: 1096 DCIKSYSKHVQADSGAIGSSREDSPTSI----KVDRVNGAAESPRVYNSNYCSNLSEEEQ 1263
            DC+++YSK +QAD  A  SS  DS   +     V  ++GAAES + Y S Y + LSEEE 
Sbjct: 380  DCVQAYSKRIQADIEARSSS--DSVNDVTQCGNVKLLSGAAESSQNYTSKYLNGLSEEEL 437

Query: 1264 VXXXXXXXXXXXXGPR 1311
            +            GPR
Sbjct: 438  MDLSELNLLLDELGPR 453


>ref|XP_016477563.1| PREDICTED: CRM-domain containing factor CFM3,
            chloroplastic/mitochondrial-like, partial [Nicotiana
            tabacum]
          Length = 505

 Score =  280 bits (715), Expect = 1e-85
 Identities = 172/396 (43%), Positives = 224/396 (56%), Gaps = 2/396 (0%)
 Frame = +1

Query: 79   PKTHSLKGFGARKPKISCCQQTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLKTPS 258
            PK  SL+ F A+  +I C  QT+  D E Q  TN  KKK+KPRPSFLEQVQ+KWS+KT S
Sbjct: 33   PKIQSLQNFRAKSIRIYCSSQTIHSDKENQ--TNQTKKKQKPRPSFLEQVQDKWSVKTTS 90

Query: 259  LRQNFPWQEQENGDTNQQFQAQTXXXXXXXXXXXXXXXXXXXXXXXXXHTKIKSTLAPWV 438
            LR+ FPWQE  +    +  +                             ++IK  LAPWV
Sbjct: 91   LREKFPWQELNSVSIEEVAEQDLLSSVSKTEENPVVNESVSSG------SRIKVNLAPWV 144

Query: 439  HGNEPRKKVFNSKGSIKSQEKVHQTEHLQNEEPMVSVIQGSDDLVKKKFGEFDEIPIGLP 618
            HGN+P+K   +S    ++ EK    E+  +EE  + +  G D+                 
Sbjct: 145  HGNQPKKSQLDS-FEARNFEKNANWENNVSEE--LDIESGKDE----------------- 184

Query: 619  EKNENLGVDKSKNVTSMEDLSISYRVTSSVKYSAGAD--DLKRLPWERKINEEFVKENKL 792
                       K++     +S  Y V SS  +  G    +  RLPW+ + +      +KL
Sbjct: 185  -----------KDIKLETKVSHRYEVQSSSNFDKGITYANSVRLPWQGERDVGPASGDKL 233

Query: 793  RNRNTELAERVIPEHELKRLRNVSLRMVERMKVGAAGVTQELVDAIHEKWKDDEVVKLKF 972
            R  NTE+AE++IPE +LK+LRN +LRMVER+KVG+AGVTQELVD+IHEKWK DE+VKL+F
Sbjct: 234  RKSNTEMAEKMIPEPQLKKLRNAALRMVERIKVGSAGVTQELVDSIHEKWKVDEIVKLRF 293

Query: 973  EGPPSMNMKRTHEFLESRTGGLVIWRSGSLVVLYRGMTYKLDCIKSYSKHVQADSGAIGS 1152
            EGPPS NMKRTHE LE RTGGLVIWRSGS +VLYRG+ YKL C++S++     D     S
Sbjct: 294  EGPPSHNMKRTHEILEHRTGGLVIWRSGSSIVLYRGIPYKLPCVQSFTTR-NDDIDESES 352

Query: 1153 SREDSPTSIKVDRVNGAAESPRVYNSNYCSNLSEEE 1260
            S+ D+  S  V  +N A E PR    N  SNLS  E
Sbjct: 353  SKNDNGQSFGVKSLNEATERPR----NGFSNLSGAE 384


>ref|XP_019249130.1| PREDICTED: CRM-domain containing factor CFM3,
            chloroplastic/mitochondrial [Nicotiana attenuata]
          Length = 832

 Score =  283 bits (725), Expect = 7e-84
 Identities = 177/417 (42%), Positives = 231/417 (55%), Gaps = 6/417 (1%)
 Frame = +1

Query: 79   PKTHSLKGFGARKPKISCCQQTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLKTPS 258
            PK  SL    A+  +I C  QT+  D E Q  TN  KKK+KPRPSFLEQVQNKWS+KT S
Sbjct: 33   PKIQSLHNLRAKNIRIYCSSQTIHSDKENQ--TNQTKKKQKPRPSFLEQVQNKWSVKTTS 90

Query: 259  LRQNFPWQE------QENGDTNQQFQAQTXXXXXXXXXXXXXXXXXXXXXXXXXHTKIKS 420
            LR+ FPWQE      +E  + + QF                              ++IK 
Sbjct: 91   LREKFPWQELNSVSIEEVAEQDLQFSVAKTEENPVVNDSVSSG------------SRIKV 138

Query: 421  TLAPWVHGNEPRKKVFNSKGSIKSQEKVHQTEHLQNEEPMVSVIQGSDDLVKKKFGEFDE 600
            +LAPWVHGN+P+K          SQ    +  + +N     ++I  S +  +    E  +
Sbjct: 139  SLAPWVHGNQPKK----------SQLVSFEARNFENNADESNIIGKSLEHCENNVSEELD 188

Query: 601  IPIGLPEKNENLGVDKSKNVTSMEDLSISYRVTSSVKYSAGADDLKRLPWERKINEEFVK 780
            +  G  EK+  L            +  + +R  SS K S       RLPW+ + +   + 
Sbjct: 189  VKSGKDEKDIKL---------ESRETMVLHRYESSSKSSV------RLPWQGERDVGPMG 233

Query: 781  ENKLRNRNTELAERVIPEHELKRLRNVSLRMVERMKVGAAGVTQELVDAIHEKWKDDEVV 960
             +KLR  N E+AE++IPE +LK+LRN +LRMVER+KVG+AGVTQELVD+IHEKWK DE+V
Sbjct: 234  GDKLRKSNAEMAEKMIPEPQLKKLRNAALRMVERIKVGSAGVTQELVDSIHEKWKVDEIV 293

Query: 961  KLKFEGPPSMNMKRTHEFLESRTGGLVIWRSGSLVVLYRGMTYKLDCIKSYSKHVQADSG 1140
            KL+FEGPPS NMKRTHE LE RTGGLVIWRSGS +VLYRG++YKL C++S++     D  
Sbjct: 294  KLRFEGPPSHNMKRTHEILEHRTGGLVIWRSGSSIVLYRGISYKLPCVQSFTAR-NDDID 352

Query: 1141 AIGSSREDSPTSIKVDRVNGAAESPRVYNSNYCSNLSEEEQVXXXXXXXXXXXXGPR 1311
               SS+ D+  S  V  +N A E PR    N  SNLS  E +            GPR
Sbjct: 353  ESESSKSDNGQSFGVKSLNEATERPR----NGFSNLSGAEIMDLSELNMLLDEVGPR 405


>ref|XP_009799178.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Nicotiana sylvestris]
          Length = 827

 Score =  280 bits (716), Expect = 1e-82
 Identities = 172/396 (43%), Positives = 224/396 (56%), Gaps = 2/396 (0%)
 Frame = +1

Query: 79   PKTHSLKGFGARKPKISCCQQTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLKTPS 258
            PK  SL+ F A+  +I C  QT+  D E Q  TN  KKK+KPRPSFLEQVQ+KWS+KT S
Sbjct: 33   PKIQSLQNFRAKSIRIYCSSQTIHSDKENQ--TNQTKKKQKPRPSFLEQVQDKWSVKTTS 90

Query: 259  LRQNFPWQEQENGDTNQQFQAQTXXXXXXXXXXXXXXXXXXXXXXXXXHTKIKSTLAPWV 438
            LR+ FPWQE  +    +  +                             ++IK  LAPWV
Sbjct: 91   LREKFPWQELNSVSIEEVAEQDLLSSVSKTEENPVVNESVSSG------SRIKVNLAPWV 144

Query: 439  HGNEPRKKVFNSKGSIKSQEKVHQTEHLQNEEPMVSVIQGSDDLVKKKFGEFDEIPIGLP 618
            HGN+P+K   +S    ++ EK    E+  +EE  + +  G D+                 
Sbjct: 145  HGNQPKKSQLDS-FEARNFEKNANWENNVSEE--LDIESGKDE----------------- 184

Query: 619  EKNENLGVDKSKNVTSMEDLSISYRVTSSVKYSAGAD--DLKRLPWERKINEEFVKENKL 792
                       K++     +S  Y V SS  +  G    +  RLPW+ + +      +KL
Sbjct: 185  -----------KDIKLETKVSHRYEVQSSSNFDKGITYANSDRLPWQGERDVGPASGDKL 233

Query: 793  RNRNTELAERVIPEHELKRLRNVSLRMVERMKVGAAGVTQELVDAIHEKWKDDEVVKLKF 972
            R  NTE+AE++IPE +LK+LRN +LRMVER+KVG+AGVTQELVD+IHEKWK DE+VKL+F
Sbjct: 234  RKSNTEMAEKMIPEPQLKKLRNAALRMVERIKVGSAGVTQELVDSIHEKWKVDEIVKLRF 293

Query: 973  EGPPSMNMKRTHEFLESRTGGLVIWRSGSLVVLYRGMTYKLDCIKSYSKHVQADSGAIGS 1152
            EGPPS NMKRTHE LE RTGGLVIWRSGS +VLYRG+ YKL C++S++     D     S
Sbjct: 294  EGPPSHNMKRTHEILEHRTGGLVIWRSGSSIVLYRGIPYKLPCVQSFTTR-NDDIDESES 352

Query: 1153 SREDSPTSIKVDRVNGAAESPRVYNSNYCSNLSEEE 1260
            S+ D+  S  V  +N A E PR    N  SNLS  E
Sbjct: 353  SKNDNGQSFGVKSLNEATERPR----NGFSNLSGAE 384


>gb|OIS99894.1| crm-domain containing factor cfm3, chloroplasticmitochondrial
            [Nicotiana attenuata]
          Length = 1166

 Score =  283 bits (725), Expect = 6e-82
 Identities = 177/417 (42%), Positives = 231/417 (55%), Gaps = 6/417 (1%)
 Frame = +1

Query: 79   PKTHSLKGFGARKPKISCCQQTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLKTPS 258
            PK  SL    A+  +I C  QT+  D E Q  TN  KKK+KPRPSFLEQVQNKWS+KT S
Sbjct: 367  PKIQSLHNLRAKNIRIYCSSQTIHSDKENQ--TNQTKKKQKPRPSFLEQVQNKWSVKTTS 424

Query: 259  LRQNFPWQE------QENGDTNQQFQAQTXXXXXXXXXXXXXXXXXXXXXXXXXHTKIKS 420
            LR+ FPWQE      +E  + + QF                              ++IK 
Sbjct: 425  LREKFPWQELNSVSIEEVAEQDLQFSVAKTEENPVVNDSVSSG------------SRIKV 472

Query: 421  TLAPWVHGNEPRKKVFNSKGSIKSQEKVHQTEHLQNEEPMVSVIQGSDDLVKKKFGEFDE 600
            +LAPWVHGN+P+K          SQ    +  + +N     ++I  S +  +    E  +
Sbjct: 473  SLAPWVHGNQPKK----------SQLVSFEARNFENNADESNIIGKSLEHCENNVSEELD 522

Query: 601  IPIGLPEKNENLGVDKSKNVTSMEDLSISYRVTSSVKYSAGADDLKRLPWERKINEEFVK 780
            +  G  EK+  L            +  + +R  SS K S       RLPW+ + +   + 
Sbjct: 523  VKSGKDEKDIKL---------ESRETMVLHRYESSSKSSV------RLPWQGERDVGPMG 567

Query: 781  ENKLRNRNTELAERVIPEHELKRLRNVSLRMVERMKVGAAGVTQELVDAIHEKWKDDEVV 960
             +KLR  N E+AE++IPE +LK+LRN +LRMVER+KVG+AGVTQELVD+IHEKWK DE+V
Sbjct: 568  GDKLRKSNAEMAEKMIPEPQLKKLRNAALRMVERIKVGSAGVTQELVDSIHEKWKVDEIV 627

Query: 961  KLKFEGPPSMNMKRTHEFLESRTGGLVIWRSGSLVVLYRGMTYKLDCIKSYSKHVQADSG 1140
            KL+FEGPPS NMKRTHE LE RTGGLVIWRSGS +VLYRG++YKL C++S++     D  
Sbjct: 628  KLRFEGPPSHNMKRTHEILEHRTGGLVIWRSGSSIVLYRGISYKLPCVQSFTAR-NDDID 686

Query: 1141 AIGSSREDSPTSIKVDRVNGAAESPRVYNSNYCSNLSEEEQVXXXXXXXXXXXXGPR 1311
               SS+ D+  S  V  +N A E PR    N  SNLS  E +            GPR
Sbjct: 687  ESESSKSDNGQSFGVKSLNEATERPR----NGFSNLSGAEIMDLSELNMLLDEVGPR 739


>gb|OVA05797.1| RNA-binding [Macleaya cordata]
          Length = 903

 Score =  263 bits (672), Expect = 1e-75
 Identities = 167/412 (40%), Positives = 234/412 (56%), Gaps = 19/412 (4%)
 Frame = +1

Query: 133  CQQTVEVDTETQHNTNLA----KKKRKPRPSFLEQVQNKWSLKTPSLRQNFPWQEQENGD 300
            C QT+ V++E    T +     KKKRK RPSF EQV+++WSLK  S R  FPWQEQE  +
Sbjct: 49   CYQTIRVESEVPQKTKVTSKTPKKKRKLRPSFYEQVRDRWSLKNHSQRLKFPWQEQEEQE 108

Query: 301  TNQQFQAQTXXXXXXXXXXXXXXXXXXXXXXXXXHTKIKSTLAPWVHGNEPRKKVFNSK- 477
              Q+ Q Q                          +  I    APWVH ++PR+  F S+ 
Sbjct: 109  QEQE-QEQEEKEENQQLSPTFNSLEEKEVNFDLGNRVIS---APWVHRSKPREPHFKSET 164

Query: 478  -----GSIKSQEKVHQTEHLQNEEPMVSVIQGSDDLVK--KKFGEFDEIPIGLPE-KNEN 633
                   I  +E   + E+L+N + +V+    S +  +        D   IGL E K  +
Sbjct: 165  KITKNSCIDGEEVSERKENLKNSKRVVNNSNRSSEENEFLGSIVNIDASQIGLAEEKLMD 224

Query: 634  LGVDKSKNVTSMEDLSISYRVTSSVKYSAGADDLKRLPWERKINEEFVKENKLRNRNTEL 813
             G D +  ++  E  S S     +   S+G++D  +LPWE+K   E V  +K R   TEL
Sbjct: 225  FGDDFNDIISLDEYSSRSDENVDTFVGSSGSNDSVKLPWEKKSTIESVDGHKWRRNKTEL 284

Query: 814  AERVIPEHELKRLRNVSLRMVERMKVGAAGVTQELVDAIHEKWKDDEVVKLKFEGPPSMN 993
            AE+++PE EL+RLRNV+LRM ER+KVGAAG+TQ L+D IH+KWK DEVVKLKFEGPP++N
Sbjct: 285  AEKLVPELELRRLRNVALRMKERIKVGAAGITQALLDCIHDKWKVDEVVKLKFEGPPALN 344

Query: 994  MKRTHEFLESRTGGLVIWRSGSLVVLYRGMTYKLDCIKSYSKHVQADSGAIGSSREDSPT 1173
            M+RTH+ LES+TGGLVIWRSGS +VL+RGM+YKL C++SY+K  QA+   + ++     +
Sbjct: 345  MQRTHDVLESKTGGLVIWRSGSSIVLFRGMSYKLSCVQSYTKQSQAN---LNTNTPLKDS 401

Query: 1174 SIKVDRVNGAAESPRVYNSNYCSNL------SEEEQVXXXXXXXXXXXXGPR 1311
            +  V R  G ++S R  +++  S++      SEEE V            GPR
Sbjct: 402  ASDVIRSVGVSDSVRATSASGTSSVKSPKDPSEEELVDISDLNNLLDELGPR 453


>gb|KZV46321.1| hypothetical protein F511_21403 [Dorcoceras hygrometricum]
          Length = 718

 Score =  257 bits (656), Expect = 1e-74
 Identities = 142/263 (53%), Positives = 168/263 (63%), Gaps = 3/263 (1%)
 Frame = +1

Query: 532  EPMVSVIQGSDDLVKKKFGEFDEIPIGLPEKNENLGVDKSKNVTSMEDLSISYRVTSSVK 711
            E +   +   D  V++  G+FDE+PI   EKN+ L  + S+  T  +DL    R T    
Sbjct: 43   EDLEEEVTSDDGSVEENCGKFDELPIRYSEKNDILVYEDSEAATFKKDLWPISRETGVTG 102

Query: 712  YSAGADDLKRLPWERKINEEFVKENKLRNRNTELAERVIPEHELKRLRNVSLRMVERMKV 891
             SA  + L RLPWE   +E   K  KLR  NTEL ER+IPE+ELKRLRNV+LRMVER KV
Sbjct: 103  RSAAENGLSRLPWEMGADENLEKGEKLRKSNTELVERLIPENELKRLRNVALRMVERTKV 162

Query: 892  GAAGVTQELVDAIHEKWKDDEVVKLKFEGPPSMNMKRTHEFLESRTGGLVIWRSGSLVVL 1071
            GAAGVTQ LVD IHEKWK +EVVKLKFEGP ++NMKRTHE LE +TGGL+IWRSGSLVVL
Sbjct: 163  GAAGVTQALVDGIHEKWKHEEVVKLKFEGPLALNMKRTHEVLERKTGGLIIWRSGSLVVL 222

Query: 1072 YRGMTYKLDCIKSYSKHVQADSGAIGSSR---EDSPTSIKVDRVNGAAESPRVYNSNYCS 1242
            YRGM YKLDC+KSY KHV+      G S    E SP SI V  V+ AA       SNY  
Sbjct: 223  YRGMAYKLDCVKSYGKHVEVHIRTSGPSEKLVEASPQSISVKHVSRAAAYSVSDASNYLK 282

Query: 1243 NLSEEEQVXXXXXXXXXXXXGPR 1311
            N+S EE++            GPR
Sbjct: 283  NVSSEEEMALHELNCLLDELGPR 305


>ref|XP_021804878.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial
            [Prunus avium]
          Length = 931

 Score =  258 bits (659), Expect = 1e-73
 Identities = 168/457 (36%), Positives = 244/457 (53%), Gaps = 45/457 (9%)
 Frame = +1

Query: 76   HPKTHSLKGFGARKPKISCCQQTVEVDTETQHNT-----NLAKKKRKPRPSFLEQVQNKW 240
            H +THS K   A + ++SC  +TV+VDT+ Q           +KKRKP+PSF EQ+Q+KW
Sbjct: 32   HHQTHSFKSCRALRIRVSC--KTVQVDTQEQPQRIKVAFEATRKKRKPKPSFFEQIQDKW 89

Query: 241  SLKTPSLRQNFPWQEQ--------ENGDTNQQFQAQTXXXXXXXXXXXXXXXXXXXXXXX 396
            S+K  S R  FPWQ+Q        E  +  ++ + +                        
Sbjct: 90   SMKVNSPRDKFPWQKQNELVQEEKEEVEEEEEEEEEEEVFEPKISKQEEGQKYSGVRVAE 149

Query: 397  XXHTKIKSTL------APWVHGNEPRKKVFNSKGSIKSQEKVHQTEHL------------ 522
              + K+  +L      APW HG++      +S+    SQ    Q ++L            
Sbjct: 150  PVNQKVSFSLPNRIVYAPWAHGSKRITPQVDSEPET-SQHSGAQGKNLDGFAGHSEIDTT 208

Query: 523  ----QNEEPMVSVIQGSDDLVKKKFGEFDEIPIGLPEKNENLGVDKSKNVTSME-----D 675
                + E+        +  L +++ GE   I IG+ +K E + + K  N  S++     D
Sbjct: 209  SGAVKKEKSFERRFDSNRKLERERVGEIGIISIGVSKKEEKM-ISKGLNGVSLDETLSGD 267

Query: 676  LSISYRVTSSVKYSAGADDLKRLPWERK--INEEFVKENKLRNRNTELAERVIPEHELKR 849
                 +V + V   +G+    RLPW+R+  ++ E   + + R  NTELAER++P+HEL+R
Sbjct: 268  GENDEKVENFVYSGSGSI---RLPWKRESELSSEEGDKTRKRRSNTELAERMLPDHELRR 324

Query: 850  LRNVSLRMVERMKVGAAGVTQELVDAIHEKWKDDEVVKLKFEGPPSMNMKRTHEFLESRT 1029
            LRNVSLRM+ER+KVG  G+TQ LV+ IHEKWK DEVVKLKFE P S+NMKRTHE LES+T
Sbjct: 325  LRNVSLRMLERIKVGVTGITQALVNTIHEKWKIDEVVKLKFEEPFSLNMKRTHEILESKT 384

Query: 1030 GGLVIWRSGSLVVLYRGMTYKLDCIKSYSKHVQADSGAIGSSRE---DSPTSIKVDRVNG 1200
            GGLVIWRSGS VVLYRGMTY L C+++Y+K  Q +S  +  S +   DS  ++ V  V+ 
Sbjct: 385  GGLVIWRSGSSVVLYRGMTYNLPCVQTYAKQSQTNSHMLQHSEKATSDSMHNVGVKDVSR 444

Query: 1201 AAESPRVYNSNYCSNLSEEEQVXXXXXXXXXXXXGPR 1311
              + P + ++ Y  +LS+ E +            GPR
Sbjct: 445  TTDFPSLESAEYLKDLSQRELMALNDLNHLLDELGPR 481


>ref|XP_022147610.1| CRM-domain containing factor CFM3, chloroplastic/mitochondrial
            [Momordica charantia]
          Length = 859

 Score =  254 bits (648), Expect = 1e-72
 Identities = 158/429 (36%), Positives = 223/429 (51%), Gaps = 17/429 (3%)
 Frame = +1

Query: 76   HPKTHSLKGFGARKPKISCCQQTVEVDTETQHNTNL---AKKKRKPRPSFLEQVQNKWSL 246
            H +  S   F   + KISC    ++VDTE      +    KKKRKPRPSFLEQ++NKWS+
Sbjct: 34   HSEIQSSIVFTPSRFKISCSNNAIQVDTEPPRRIRVDFEVKKKRKPRPSFLEQIRNKWSI 93

Query: 247  KTPSLRQNFPWQEQ-ENGDTNQQFQAQTXXXXXXXXXXXXXXXXXXXXXXXXXHTKIKST 423
            K  S R  FPWQ+Q +  +  ++ + +                           +  +  
Sbjct: 94   KPTSSRDKFPWQQQKQRREPPEEEEEEVIEQVGSESSVLEREPRNDATPAVRVASTTRGI 153

Query: 424  LAPWVHGNEPRKKVFN-----SKGSIKSQEKVHQTEHLQNEEPMVSVIQGSDDLVKKKFG 588
             APWVHG++ R   F+      KG + ++   +    ++N +              +  G
Sbjct: 154  SAPWVHGSQSRDLQFDFNRETPKGEVFNEICENSANGVRNFDASTKSFDDGPCRGGESNG 213

Query: 589  EF----DEIPIGLPEKNENLGVDKSKNVTSMEDLSISYR-VTSSVKYSAGADDLKRLPWE 753
            E     DEI +   E  E +   +   + ++E+ S S      SV       D   LPW+
Sbjct: 214  EIGESTDEILVEFSEDEEEINPVRLNVLPAIEERSASSENFVQSVSSGNDCSDPVDLPWK 273

Query: 754  RKINEEFVKENKLRNRNTELAERVIPEHELKRLRNVSLRMVERMKVGAAGVTQELVDAIH 933
            R+      + +K R++ T LAE+++PEHEL+RLRNVSLRM+ER++VG AG+TQELVD IH
Sbjct: 274  REPRRNSEEADKRRSK-TILAEQMLPEHELRRLRNVSLRMLERIEVGVAGITQELVDTIH 332

Query: 934  EKWKDDEVVKLKFEGPPSMNMKRTHEFLESRTGGLVIWRSGSLVVLYRGMTYKLDCIKSY 1113
            EKWK DEVVKLKF+GP  +NMKR HE LE++TGGLVIWRSGS++VLYRGMTY L C++S+
Sbjct: 333  EKWKVDEVVKLKFDGPLIVNMKRAHETLENKTGGLVIWRSGSMIVLYRGMTYHLPCVQSF 392

Query: 1114 SKHVQADSGAIGSSRE---DSPTSIKVDRVNGAAESPRVYNSNYCSNLSEEEQVXXXXXX 1284
            +K  QA S  +  S      +   +KV  V G   +     S +   LS+ E        
Sbjct: 393  AKQNQAKSSELNGSNNVEYHATGDVKVKNVVGTTNTIVAGASKHQKTLSKSELTELNELN 452

Query: 1285 XXXXXXGPR 1311
                  GPR
Sbjct: 453  HLLDEIGPR 461


>ref|XP_006357699.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum tuberosum]
 ref|XP_015169029.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum tuberosum]
 ref|XP_015169030.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum tuberosum]
          Length = 820

 Score =  251 bits (642), Expect = 6e-72
 Identities = 155/395 (39%), Positives = 214/395 (54%), Gaps = 2/395 (0%)
 Frame = +1

Query: 133  CQQTVEVDTETQHNTNLAKKKRKPRPSFLEQVQNKWSLKTPSLRQNFPWQEQENGDTNQQ 312
            C     + +  +   N  KK+RKPRPSF++QVQ+KWS+K  SLR+ FPWQE  +    + 
Sbjct: 44   CSSPQTIHSNREKQINEIKKQRKPRPSFVKQVQDKWSVKPTSLREKFPWQEGNSVSVEEV 103

Query: 313  FQAQTXXXXXXXXXXXXXXXXXXXXXXXXXHTKIKSTLAPWVHGNEPRKKVFNSKGSI-K 489
             + Q                           +++K  LAPWVHG +P+        ++ K
Sbjct: 104  VERQVQFSELENPVVNESVSSG---------SRVKVNLAPWVHGKQPKISQVGESSTVGK 154

Query: 490  SQEKVHQTEHLQNEEPMVSVIQGSDDLVKKKFGEFDEIPIGLPEKNENLGVDKSKNVTSM 669
            S E       ++ ++ +             K   FD  P+  P++ +    +K   + S 
Sbjct: 155  SLENCEDIGSIREQKSL------------NKQVNFDCAPLRSPQQQD---FEKDIKLESK 199

Query: 670  EDLSISYRVTSSVKYSAGADDLKRLPWERKINEEFVKENKLRNRNTELAERVIPEHELKR 849
             +  +   +T+       A D  RLPWE          +KLR  N ELAE++IPE +LKR
Sbjct: 200  AEARVDKGITN-------AKDSVRLPWEG---------DKLRKSNAELAEKLIPEAQLKR 243

Query: 850  LRNVSLRMVERMKVGAAGVTQELVDAIHEKWKDDEVVKLKFEGPPSMNMKRTHEFLESRT 1029
            LRN +LRMVER+KVG+ GVTQELVD+I +KWK DE+VKL+FEGPPS NMKRTH+ LE RT
Sbjct: 244  LRNAALRMVERIKVGSGGVTQELVDSIQDKWKVDEIVKLRFEGPPSHNMKRTHDILEHRT 303

Query: 1030 GGLVIWRSGSLVVLYRGMTYKLDCIKSY-SKHVQADSGAIGSSREDSPTSIKVDRVNGAA 1206
            GGLVIWRSGS +VLYRG++YKL C++S+ SK+   D     ++  DS  S+ V  +N AA
Sbjct: 304  GGLVIWRSGSSIVLYRGISYKLPCVQSFTSKNHDVDESEYPNN--DSCQSLGVKCLNEAA 361

Query: 1207 ESPRVYNSNYCSNLSEEEQVXXXXXXXXXXXXGPR 1311
            E PR    N  ++LS EE V            GPR
Sbjct: 362  ERPR----NGSTDLSSEEIVDLSELNMILDEVGPR 392


>ref|XP_011659986.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Cucumis sativus]
 ref|XP_004144114.2| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Cucumis sativus]
 gb|KGN66252.1| hypothetical protein Csa_1G589100 [Cucumis sativus]
          Length = 848

 Score =  250 bits (639), Expect = 2e-71
 Identities = 149/379 (39%), Positives = 213/379 (56%), Gaps = 15/379 (3%)
 Frame = +1

Query: 103  FGARKPKISCCQQTVEVDTETQHNTNL---AKKKRKPRPSFLEQVQNKWSLKTPSLRQNF 273
            F  ++ KI C   T++V+T+      +    KKKRKPRPSFLEQ+++KWS K  S    F
Sbjct: 43   FTPQRFKIHCSNNTIQVETQPPRRIRVDFEVKKKRKPRPSFLEQIRHKWSTKPISSTHTF 102

Query: 274  PWQEQENGDTNQQFQAQTXXXXXXXXXXXXXXXXXXXXXXXXXHTKI----KSTLAPWVH 441
            PWQ+QE    ++Q + +                           T+     +S  APW H
Sbjct: 103  PWQQQEQDRHHKQDEGEGEEEEEEEEEQVANQTSVSIPESTTDVTQAVPITRSISAPWAH 162

Query: 442  GNEPRKKVFNSKGSIKSQEKVHQTEHLQNEEPM------VSVIQGSDDLVKKKFGEFDEI 603
            G++ R   F+ K    + E +++   +  ++        +S+ + SDD  + +  E D +
Sbjct: 163  GSQSRNTQFDFKPKTPNGEVINEISKISTDDTSNRNASTISIDEISDDSSEDE-AEIDTV 221

Query: 604  PIGLPEKNENLGVDKSKNVTSMEDLSISYRVTSSVKYSAGADDLKR--LPWERKINEEFV 777
             + + EK   L                S ++  SV  S+  DD  R  LPW+R+   +  
Sbjct: 222  VLPVTEKRSTL----------------SKKIVHSV--SSDNDDNGRVDLPWKREPRRDSE 263

Query: 778  KENKLRNRNTELAERVIPEHELKRLRNVSLRMVERMKVGAAGVTQELVDAIHEKWKDDEV 957
             +   R   T LAE+++PEHEL+RLRN+SLRMVER++VG  G+TQEL+D+IHEKWK DEV
Sbjct: 264  VDAGQRRSKTLLAEQMLPEHELRRLRNISLRMVERIEVGVKGITQELLDSIHEKWKVDEV 323

Query: 958  VKLKFEGPPSMNMKRTHEFLESRTGGLVIWRSGSLVVLYRGMTYKLDCIKSYSKHVQADS 1137
            VKLKFEGP ++NMKR HE LE+RTGGLVIWRSGSL+VLYRGMTY L C++SY+K  QA S
Sbjct: 324  VKLKFEGPLTVNMKRAHEKLENRTGGLVIWRSGSLIVLYRGMTYHLPCVQSYAKQNQAKS 383

Query: 1138 GAIGSSREDSPTSIKVDRV 1194
              +     D P +++ D +
Sbjct: 384  NTL-----DVPNNVESDDI 397


>ref|XP_008242355.1| PREDICTED: CRM-domain containing factor CFM3,
            chloroplastic/mitochondrial-like [Prunus mume]
 ref|XP_008242356.1| PREDICTED: CRM-domain containing factor CFM3,
            chloroplastic/mitochondrial-like [Prunus mume]
          Length = 930

 Score =  251 bits (641), Expect = 3e-71
 Identities = 166/456 (36%), Positives = 240/456 (52%), Gaps = 44/456 (9%)
 Frame = +1

Query: 76   HPKTHSLKGFGARKPKISCCQQTVEVDTETQHNT-----NLAKKKRKPRPSFLEQVQNKW 240
            H +THS K   A + ++SC  +TV+VDT+ Q           +KKRKP+PSF  Q+Q+KW
Sbjct: 32   HHQTHSFKSCRALRFRVSC--KTVQVDTQEQPQRIKVAFEATRKKRKPKPSFFVQIQDKW 89

Query: 241  SLKTPSLRQNFPWQEQ-----------ENGDTNQQFQAQTXXXXXXXXXXXXXXXXXXXX 387
            S+K  S R  FPWQ+Q           E  D  ++ +                       
Sbjct: 90   SMKVNSPRDKFPWQKQNELVQEEKEEVEEDDEEEEEEVFEPKISKQEEGQKCYGERVAEP 149

Query: 388  XXXXXHTKIKSTL--APWVHGNEPRKKVFNSKGSIKSQEKVHQTEHL------------- 522
                    + + +  APW HG++      +S+    SQ    Q ++L             
Sbjct: 150  VNQKVSFSLPNRIIYAPWAHGSKRITPQVDSEPET-SQHSGAQGKNLDGFAGHSEIDTTS 208

Query: 523  ---QNEEPMVSVIQGSDDLVKKKFGEFDEIPIGLPEKNENLGVDKSKNVTSME-----DL 678
               + E+        +  L +++ GE   I IG+ +K E + + K  N  S++     D 
Sbjct: 209  GAVKKEKSFERRFDSNRKLERERAGEVGIISIGVSKKEEKM-ISKGLNGVSLDETLSGDG 267

Query: 679  SISYRVTSSVKYSAGADDLKRLPWERK--INEEFVKENKLRNRNTELAERVIPEHELKRL 852
                +V + V   +G+    RLPW+R+  ++ E   + + R  NTELAER++P+HEL+RL
Sbjct: 268  ENDEKVENFVYSGSGSI---RLPWKRESELSSEEGDKTRKRRSNTELAERMLPDHELRRL 324

Query: 853  RNVSLRMVERMKVGAAGVTQELVDAIHEKWKDDEVVKLKFEGPPSMNMKRTHEFLESRTG 1032
            RNVSLRM+ER+KVG  G+TQ LV+ IHEKWK DEVVKLKFE P S+NMKRTHE LES+TG
Sbjct: 325  RNVSLRMLERIKVGVTGITQALVNTIHEKWKIDEVVKLKFEEPFSLNMKRTHEILESKTG 384

Query: 1033 GLVIWRSGSLVVLYRGMTYKLDCIKSYSKHVQADSGAIGSSR---EDSPTSIKVDRVNGA 1203
            GLVIWRSGS VVLYRGMTY L C+++Y+K  Q +S  +  S     DS  ++ V  V+  
Sbjct: 385  GLVIWRSGSSVVLYRGMTYNLPCVQTYAKQSQTNSHMMQHSENATSDSMHNVGVKDVSRT 444

Query: 1204 AESPRVYNSNYCSNLSEEEQVXXXXXXXXXXXXGPR 1311
             + P + ++ Y  +LS++E +            GPR
Sbjct: 445  TDFPSLESAEYLKDLSQQELMALNDLNHLLDELGPR 480


>ref|XP_008450865.1| PREDICTED: CRM-domain containing factor CFM3,
            chloroplastic/mitochondrial [Cucumis melo]
          Length = 844

 Score =  249 bits (636), Expect = 6e-71
 Identities = 154/413 (37%), Positives = 220/413 (53%), Gaps = 16/413 (3%)
 Frame = +1

Query: 121  KISCCQQTVEVDTETQHNTNL---AKKKRKPRPSFLEQVQNKWSLKTPSLRQNFPWQEQE 291
            KI C   T++V+T+      +    KKKRKPRPSFLEQ+++KWS K  S    FPWQ+QE
Sbjct: 46   KIHCSNNTIQVETQPPRRIRVDFEVKKKRKPRPSFLEQIRHKWSTKPISSTHTFPWQQQE 105

Query: 292  NGDTNQQFQAQTXXXXXXXXXXXXXXXXXXXXXXXXXHTK---IKSTLAPWVHGNEPRKK 462
                ++Q + +                           T+    +S  APW HG++ R  
Sbjct: 106  QDRQHKQDEEEEEEEEEEEEEEVANQTSVSIRESTTDVTQPVQTRSISAPWAHGSQSRND 165

Query: 463  VFNSKGSIKSQEKVHQTEHLQNEEPM------VSVIQGSDDLVKKKFGEFDEIPIGLPEK 624
             F+ K    + E +++   +  ++        +S+ + SDD  + +  E D + + + EK
Sbjct: 166  QFDFKPKTPNGEVINEMSKISTDDTSNRNASTISIDEISDDSSEDE-AEIDTVVLPVTEK 224

Query: 625  NENLGVDKSKNVTSMEDLSISYRVTSSVKYSAGADDLKRLPWERKINEEFVKENKLRNRN 804
               L      +V+S  D               G  DL   PW+R+   +   +   R   
Sbjct: 225  RSLLSKKFVHSVSSDND-------------DNGRVDL---PWKREPQSDSEVDAGQRRSK 268

Query: 805  TELAERVIPEHELKRLRNVSLRMVERMKVGAAGVTQELVDAIHEKWKDDEVVKLKFEGPP 984
            T LAE+++PEHEL+RLRN+SLRMVER++VG AG+TQEL+D+IHEKWK DEVVKLKFEGP 
Sbjct: 269  TLLAEQMLPEHELRRLRNISLRMVERIEVGVAGITQELLDSIHEKWKVDEVVKLKFEGPL 328

Query: 985  SMNMKRTHEFLESRTGGLVIWRSGSLVVLYRGMTYKLDCIKSYSKHVQADSGAIGSSR-- 1158
            ++NMKR HE LE++TGGLVIWRSGSL+VLYRGMTY L C++SY+K  QA S  +  S   
Sbjct: 329  TVNMKRAHEKLENKTGGLVIWRSGSLIVLYRGMTYHLPCVQSYAKQNQARSKTLDGSNNV 388

Query: 1159 --EDSPTSIKVDRVNGAAESPRVYNSNYCSNLSEEEQVXXXXXXXXXXXXGPR 1311
              +D+  + K     G   +     S +   LS++E +            GPR
Sbjct: 389  ESDDTTRNEKSHTTVGTMSTIVSGASKHTKTLSKKELMELSDLNHLLDEIGPR 441