BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00009765
         (2223 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIM98418.1| Nucleotide excision repair complex XPC-HR23B, sub...   959   0.0  
ref|XP_011099942.1| DNA repair protein RAD4 isoform X2 [Sesamum ...   931   0.0  
ref|XP_011099941.1| DNA repair protein RAD4 isoform X1 [Sesamum ...   931   0.0  
ref|XP_022884611.1| DNA repair protein RAD4 isoform X2 [Olea eur...   846   0.0  
ref|XP_022884610.1| DNA repair protein RAD4 isoform X1 [Olea eur...   837   0.0  
ref|XP_019182670.1| PREDICTED: DNA repair protein RAD4 [Ipomoea ...   738   0.0  
ref|XP_011007252.1| PREDICTED: DNA repair protein complementing ...   732   0.0  
ref|XP_011007251.1| PREDICTED: DNA repair protein complementing ...   732   0.0  
ref|XP_024037763.1| DNA repair protein RAD4 isoform X2 [Citrus c...   721   0.0  
gb|PNT40262.1| hypothetical protein POPTR_004G087400v3 [Populus ...   721   0.0  
ref|XP_006430573.1| DNA repair protein RAD4 isoform X1 [Citrus c...   721   0.0  
dbj|GAY43724.1| hypothetical protein CUMW_076680 [Citrus unshiu]      719   0.0  
ref|XP_006482097.1| PREDICTED: DNA repair protein RAD4 isoform X...   717   0.0  
ref|XP_009589685.1| PREDICTED: DNA repair protein RAD4 isoform X...   714   0.0  
ref|XP_006482096.1| PREDICTED: DNA repair protein RAD4 isoform X...   717   0.0  
ref|XP_016499274.1| PREDICTED: DNA repair protein RAD4-like isof...   712   0.0  
gb|EOY03915.1| DNA repair protein xp-C / rad4, putative isoform ...   714   0.0  
ref|XP_009589684.1| PREDICTED: DNA repair protein RAD4 isoform X...   714   0.0  
ref|XP_016499273.1| PREDICTED: DNA repair protein RAD4-like isof...   712   0.0  
gb|EOY03914.1| DNA repair protein xp-C / rad4, putative isoform ...   714   0.0  

>gb|PIM98418.1| Nucleotide excision repair complex XPC-HR23B, subunit XPC/DPB11
            [Handroanthus impetiginosus]
          Length = 647

 Score =  959 bits (2479), Expect = 0.0
 Identities = 496/654 (75%), Positives = 529/654 (80%), Gaps = 9/654 (1%)
 Frame = -2

Query: 2054 MVAGPSCSSAYTVKPSPYVEQDSSQTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMS 1875
            MVAGPSCSS+ TVK SP +EQ SSQTA+RGAGR KADK RKHEL++Q S   D+P DKMS
Sbjct: 1    MVAGPSCSSSCTVKSSPEIEQGSSQTAVRGAGRVKADKPRKHELEAQGSRTIDEPKDKMS 60

Query: 1874 EVSVSEVPTDTSEPCLVKSEGLKRKGDLEFQMQLEMALSATAVVNSHVSMASDAXXXXXX 1695
            + SVSE PTD  EP LVK E LKRKGDLEFQMQLEMALSATA+ +S +SMAS+A      
Sbjct: 61   DKSVSEAPTDILEPRLVKYEALKRKGDLEFQMQLEMALSATAIGSSKISMASNASESPST 120

Query: 1694 XXXXXXS-KRMKKIRKEESQTCSNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDA 1518
                    K+ KKI KEESQ+ S+GISTAIGSKKVGAPLYWAEVFC GENLTGKWVHVD 
Sbjct: 121  SSILAPPSKKFKKITKEESQSSSHGISTAIGSKKVGAPLYWAEVFCSGENLTGKWVHVDV 180

Query: 1517 VNAIIDGEHKVEAAAAACKKSLRYVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAV 1338
            VNAIIDGEHKVEAAAAACKK LRYVVAFAGHGAKDVTRRYCTKWYKVAAQRIN TWWDAV
Sbjct: 181  VNAIIDGEHKVEAAAAACKKPLRYVVAFAGHGAKDVTRRYCTKWYKVAAQRINLTWWDAV 240

Query: 1337 LEPLKELESGATGGVVSVECEASCQKKVEASQVEP-------SMSNSCGASMDSCEKKAT 1179
            L PLKELESGATGGVV +EC+ S  +K+EASQV          ++NS GAS +  EK A 
Sbjct: 241  LAPLKELESGATGGVVQLECKDSGHEKIEASQVADLNHGCLLDVNNSFGASEECREKNAV 300

Query: 1178 ESFMRNSFASTRGSLEDMELETRALIEPLPTNQQAYRNHHLYVIERWLKKYEILYPKGPV 999
            ES MRNSFASTR SLEDMELETRAL EPLPTNQQAYR HHLYVIERWLKKYEILYPKGPV
Sbjct: 301  ESSMRNSFASTRSSLEDMELETRALTEPLPTNQQAYRTHHLYVIERWLKKYEILYPKGPV 360

Query: 998  LGFCSGHSVYPRTCVQTLHTKERWLREGLQVKAGEVPVKVLKRSMKCSKEEAGDDNDYAE 819
            LGFCSGH VYPR CVQTLHTKERWLREGLQVKAGEVP KVLKRS+K SKEEA DDNDYA+
Sbjct: 361  LGFCSGHPVYPRACVQTLHTKERWLREGLQVKAGEVPAKVLKRSLKRSKEEAEDDNDYAD 420

Query: 818  VDHQGITSLYGKWQTEPLCLPRAVNGIVPKNERGQVDVWSEKCLPPGTIHLRLPRVATVA 639
             DHQGIT+LYGKWQTEPLCLPRAVNGIVPKNERGQVDVWSEKCLPPGT+HLR PR+A+VA
Sbjct: 421  GDHQGITALYGKWQTEPLCLPRAVNGIVPKNERGQVDVWSEKCLPPGTVHLRFPRIASVA 480

Query: 638  RRLDIDFAPAMVGFDFRNGRSVPLFEGIVVCTEFKDAILXXXXXXXXXXXXXXXXXXXAQ 459
            +RLDIDFAPAMVGFDFRNGR VPLFEGIVVCTEF DAIL                   A 
Sbjct: 481  KRLDIDFAPAMVGFDFRNGRCVPLFEGIVVCTEFTDAILEAYLEEEERREAEEKRKNEAL 540

Query: 458  ALTRWYQLLSSIITRKRLNECYGDGALPQSSIEIPKSGDKCYNXXXXXXXXXXXXXSPEC 279
            AL+RWYQLLSSIITR+RLN CYGDG L QSSIEI K  D+C               SP  
Sbjct: 541  ALSRWYQLLSSIITRQRLNNCYGDGTLSQSSIEILKLDDQC-------SKPQKGEASPGR 593

Query: 278  QQVNIPEKLNAPSSMPTENHEHEFILDEKKVDE-GGLTRIKRCHCGFSIQFEEL 120
            QQVN PEK + P SMPTENHEHEFILDEK +DE GG TRIKRCHCGFSIQFEEL
Sbjct: 594  QQVNTPEKCDVPPSMPTENHEHEFILDEKVLDENGGQTRIKRCHCGFSIQFEEL 647


>ref|XP_011099942.1| DNA repair protein RAD4 isoform X2 [Sesamum indicum]
          Length = 949

 Score =  931 bits (2405), Expect = 0.0
 Identities = 484/691 (70%), Positives = 535/691 (77%), Gaps = 8/691 (1%)
 Frame = -2

Query: 2168 RFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPSCSSAYTVKPSPYVEQD 1989
            RFVSILDV+SLKPD D SE  +    K  RDIFSSSTLMVAGPSCSSA T K    VE  
Sbjct: 262  RFVSILDVVSLKPDGDISEHIMEVCSKRGRDIFSSSTLMVAGPSCSSASTSKSPTGVEHG 321

Query: 1988 SSQTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSEVPTDTSEPCLVKSEGL 1809
             SQ+A  GAGR KADKS+K+ LQ QDSL  DKP DKMS+V+V E P D SEPCLVKS+GL
Sbjct: 322  ISQSAAGGAGRHKADKSKKNGLQCQDSLTIDKPKDKMSDVAVPETPIDISEPCLVKSDGL 381

Query: 1808 KRKGDLEFQMQLEMALSATAVVNSHVSMASDAXXXXXXXXXXXXS-KRMKKIRKEESQTC 1632
            KRKGDLEFQMQLEMALSATA+ +S +SMAS A              KRM+KI+KEESQT 
Sbjct: 382  KRKGDLEFQMQLEMALSATAIGSSKISMASSASESPSRSSTLTPPSKRMRKIKKEESQTS 441

Query: 1631 SNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDGEHKVEAAAAACKKSL 1452
            S+GISTAIGSKKVGAPLYWAEVFC GENLTGKWVHVDA+N I+DGEHKVEAAA ACKKSL
Sbjct: 442  SDGISTAIGSKKVGAPLYWAEVFCCGENLTGKWVHVDAINGIVDGEHKVEAAALACKKSL 501

Query: 1451 RYVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEPLKELESGATGGVVSVECEA 1272
            RYVVAFAG GAKDVTRRYCTKWYKVAA+R+NS+WWDAVL PL+ELESGATGG V++E EA
Sbjct: 502  RYVVAFAGQGAKDVTRRYCTKWYKVAAKRVNSSWWDAVLAPLRELESGATGGGVNLEYEA 561

Query: 1271 SCQKKVEASQVEPS-------MSNSCGASMDSCEKKATESFMRNSFASTRGSLEDMELET 1113
            S  +K E SQV  S        ++SCGA  +  EK+   S MR SFASTR SLEDMELET
Sbjct: 562  SSHEKNEESQVANSNHGCSIDKNHSCGACKECSEKQVEGSSMRKSFASTRSSLEDMELET 621

Query: 1112 RALIEPLPTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGHSVYPRTCVQTLHTKE 933
            RAL EPLPTNQQAYRNH LYVIERWL K ++LYPKGPVLGFCSGH+VYPRTCV+TL TKE
Sbjct: 622  RALTEPLPTNQQAYRNHQLYVIERWLNKNQVLYPKGPVLGFCSGHAVYPRTCVRTLRTKE 681

Query: 932  RWLREGLQVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGITSLYGKWQTEPLCLPR 753
            RW REGLQVKAGEVP KVLKRS+K  KEEA DDN+Y + DHQ IT+LYG+WQTEPL LPR
Sbjct: 682  RWFREGLQVKAGEVPAKVLKRSLKRGKEEAADDNNYTDGDHQDITALYGRWQTEPLHLPR 741

Query: 752  AVNGIVPKNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDFAPAMVGFDFRNGRSV 573
            AVNGIVPKNERG+VDVWSEKCLPPGT+HLRLPRVA VA+RLDID+A AMVGF+FRNGRS 
Sbjct: 742  AVNGIVPKNERGRVDVWSEKCLPPGTVHLRLPRVAAVAKRLDIDYAHAMVGFEFRNGRSA 801

Query: 572  PLFEGIVVCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALTRWYQLLSSIITRKRLNECY 393
            PLFEGIVVCTEFKDAIL                   A AL+RWYQLLSSIITR+RLN CY
Sbjct: 802  PLFEGIVVCTEFKDAILQAYLEEEERREAEEKRRNEALALSRWYQLLSSIITRQRLNSCY 861

Query: 392  GDGALPQSSIEIPKSGDKCYNXXXXXXXXXXXXXSPECQQVNIPEKLNAPSSMPTENHEH 213
            G GAL Q S EIPKS DKC               SP CQQ +  EK     SMP ENHEH
Sbjct: 862  GAGALSQPSSEIPKSDDKC---STSATRAQEIVASPRCQQDDTSEKPYVLPSMPEENHEH 918

Query: 212  EFILDEKKVDEGGLTRIKRCHCGFSIQFEEL 120
            EF+LD++   E G T++KRC CGF +QFE +
Sbjct: 919  EFVLDKEVFGEEGPTQVKRCRCGFLVQFETI 949


>ref|XP_011099941.1| DNA repair protein RAD4 isoform X1 [Sesamum indicum]
          Length = 967

 Score =  931 bits (2405), Expect = 0.0
 Identities = 484/691 (70%), Positives = 535/691 (77%), Gaps = 8/691 (1%)
 Frame = -2

Query: 2168 RFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPSCSSAYTVKPSPYVEQD 1989
            RFVSILDV+SLKPD D SE  +    K  RDIFSSSTLMVAGPSCSSA T K    VE  
Sbjct: 280  RFVSILDVVSLKPDGDISEHIMEVCSKRGRDIFSSSTLMVAGPSCSSASTSKSPTGVEHG 339

Query: 1988 SSQTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSEVPTDTSEPCLVKSEGL 1809
             SQ+A  GAGR KADKS+K+ LQ QDSL  DKP DKMS+V+V E P D SEPCLVKS+GL
Sbjct: 340  ISQSAAGGAGRHKADKSKKNGLQCQDSLTIDKPKDKMSDVAVPETPIDISEPCLVKSDGL 399

Query: 1808 KRKGDLEFQMQLEMALSATAVVNSHVSMASDAXXXXXXXXXXXXS-KRMKKIRKEESQTC 1632
            KRKGDLEFQMQLEMALSATA+ +S +SMAS A              KRM+KI+KEESQT 
Sbjct: 400  KRKGDLEFQMQLEMALSATAIGSSKISMASSASESPSRSSTLTPPSKRMRKIKKEESQTS 459

Query: 1631 SNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDGEHKVEAAAAACKKSL 1452
            S+GISTAIGSKKVGAPLYWAEVFC GENLTGKWVHVDA+N I+DGEHKVEAAA ACKKSL
Sbjct: 460  SDGISTAIGSKKVGAPLYWAEVFCCGENLTGKWVHVDAINGIVDGEHKVEAAALACKKSL 519

Query: 1451 RYVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEPLKELESGATGGVVSVECEA 1272
            RYVVAFAG GAKDVTRRYCTKWYKVAA+R+NS+WWDAVL PL+ELESGATGG V++E EA
Sbjct: 520  RYVVAFAGQGAKDVTRRYCTKWYKVAAKRVNSSWWDAVLAPLRELESGATGGGVNLEYEA 579

Query: 1271 SCQKKVEASQVEPS-------MSNSCGASMDSCEKKATESFMRNSFASTRGSLEDMELET 1113
            S  +K E SQV  S        ++SCGA  +  EK+   S MR SFASTR SLEDMELET
Sbjct: 580  SSHEKNEESQVANSNHGCSIDKNHSCGACKECSEKQVEGSSMRKSFASTRSSLEDMELET 639

Query: 1112 RALIEPLPTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGHSVYPRTCVQTLHTKE 933
            RAL EPLPTNQQAYRNH LYVIERWL K ++LYPKGPVLGFCSGH+VYPRTCV+TL TKE
Sbjct: 640  RALTEPLPTNQQAYRNHQLYVIERWLNKNQVLYPKGPVLGFCSGHAVYPRTCVRTLRTKE 699

Query: 932  RWLREGLQVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGITSLYGKWQTEPLCLPR 753
            RW REGLQVKAGEVP KVLKRS+K  KEEA DDN+Y + DHQ IT+LYG+WQTEPL LPR
Sbjct: 700  RWFREGLQVKAGEVPAKVLKRSLKRGKEEAADDNNYTDGDHQDITALYGRWQTEPLHLPR 759

Query: 752  AVNGIVPKNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDFAPAMVGFDFRNGRSV 573
            AVNGIVPKNERG+VDVWSEKCLPPGT+HLRLPRVA VA+RLDID+A AMVGF+FRNGRS 
Sbjct: 760  AVNGIVPKNERGRVDVWSEKCLPPGTVHLRLPRVAAVAKRLDIDYAHAMVGFEFRNGRSA 819

Query: 572  PLFEGIVVCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALTRWYQLLSSIITRKRLNECY 393
            PLFEGIVVCTEFKDAIL                   A AL+RWYQLLSSIITR+RLN CY
Sbjct: 820  PLFEGIVVCTEFKDAILQAYLEEEERREAEEKRRNEALALSRWYQLLSSIITRQRLNSCY 879

Query: 392  GDGALPQSSIEIPKSGDKCYNXXXXXXXXXXXXXSPECQQVNIPEKLNAPSSMPTENHEH 213
            G GAL Q S EIPKS DKC               SP CQQ +  EK     SMP ENHEH
Sbjct: 880  GAGALSQPSSEIPKSDDKC---STSATRAQEIVASPRCQQDDTSEKPYVLPSMPEENHEH 936

Query: 212  EFILDEKKVDEGGLTRIKRCHCGFSIQFEEL 120
            EF+LD++   E G T++KRC CGF +QFE +
Sbjct: 937  EFVLDKEVFGEEGPTQVKRCRCGFLVQFETI 967


>ref|XP_022884611.1| DNA repair protein RAD4 isoform X2 [Olea europaea var. sylvestris]
          Length = 977

 Score =  846 bits (2186), Expect = 0.0
 Identities = 444/694 (63%), Positives = 513/694 (73%), Gaps = 11/694 (1%)
 Frame = -2

Query: 2168 RFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPSCSSAYTVKPSPYVE-Q 1992
            RFVSILDV S+KPDA K  S+ +   K  + IF+SSTLMVAGPSC      K S + + Q
Sbjct: 289  RFVSILDVASMKPDAYKCSSTNSGVSKGGKGIFNSSTLMVAGPSCLFDSPSKLSSFDDMQ 348

Query: 1991 DSSQTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSEVPTDTSEPCLVKSEG 1812
              SQ  +RG+G   A+KS KHE QS    +TDK TD  S+ S +E  T  S P L++SEG
Sbjct: 349  KGSQCPVRGSGESMAEKSMKHEFQSHGIFVTDKSTDGKSD-SFTEAGTAASVPDLMESEG 407

Query: 1811 LKRKGDLEFQMQLEMALSATAVVNSHVSMA-SDAXXXXXXXXXXXXSKRMKKIRKEESQT 1635
            LKRKGDLEF+MQL++ALSATA+ +S  +MA S               KRMKKI  E S +
Sbjct: 408  LKRKGDLEFEMQLKIALSATAIESSKSTMAPSVVDSPSNSSTITPPYKRMKKIMTEGSSS 467

Query: 1634 CSNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDGEHKVEAAAAACKKS 1455
             SNGIST+IGSKKVGAPLYWAEVFC GENLTGKWVHVDAVNAIIDGE KVEAAA+ACKKS
Sbjct: 468  SSNGISTSIGSKKVGAPLYWAEVFCNGENLTGKWVHVDAVNAIIDGEQKVEAAASACKKS 527

Query: 1454 LRYVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEPLKELESGATGGVVSVECE 1275
            LRYVVAFAGHGAKDVTRRYCTKWYK+A+QRINSTWWD VL PLKELESGAT GV+++E E
Sbjct: 528  LRYVVAFAGHGAKDVTRRYCTKWYKIASQRINSTWWDRVLAPLKELESGATSGVINLEQE 587

Query: 1274 ASCQKKVEASQVEPSMSNSC--------GASMDSCEKKATESFMRNSFASTRGSLEDMEL 1119
            AS  +++EA +        C        G S + C  KA  S M+NS  ++R SLEDMEL
Sbjct: 588  ASVGEEMEALRGADQSGRECLLKTKQLCGES-EECSDKAAVSLMKNSVEASRSSLEDMEL 646

Query: 1118 ETRALIEPLPTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGHSVYPRTCVQTLHT 939
            ETRAL EPLPTNQQAY+NHHLY IERWLKKYEI+YPKGPVLGFCSGH VYPRTCVQTLHT
Sbjct: 647  ETRALTEPLPTNQQAYKNHHLYAIERWLKKYEIMYPKGPVLGFCSGHPVYPRTCVQTLHT 706

Query: 938  KERWLREGLQVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGITSLYGKWQTEPLCL 759
            KERWLREGLQVK  E+P KVLKRS+  SKE+A  D++Y+EVD +G  SLYGKWQT+ LCL
Sbjct: 707  KERWLREGLQVKVDELPAKVLKRSLNRSKEQAHVDDEYSEVDPEGTVSLYGKWQTKKLCL 766

Query: 758  PRAVNGIVPKNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDFAPAMVGFDFRNGR 579
            P+A+NGIVPKNERG+VDVWSEKCLPPGT+HLRLPRV  VA+RLDID+APAMVGF+FRNGR
Sbjct: 767  PQAINGIVPKNERGRVDVWSEKCLPPGTVHLRLPRVGLVAKRLDIDYAPAMVGFEFRNGR 826

Query: 578  SVPLFEGIVVCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALTRWYQLLSSIITRKRLNE 399
            S P+ EGIVVC E+KDAIL                   A AL+RWYQLLSSIITR+RL  
Sbjct: 827  SFPVVEGIVVCAEYKDAILEAYAEEEERRMAEEKRRNEALALSRWYQLLSSIITRQRLKN 886

Query: 398  CYGDGALPQSSIEIPKSGDKCYNXXXXXXXXXXXXXSPECQQVNIP-EKLNAPSSMPTEN 222
            CYGDG   Q SI+IP   +K                SP C QVN P EK NAP+++PT+N
Sbjct: 887  CYGDGDSSQPSIDIPIPNNK---SCIPPSRTNQKNVSPRCHQVNTPDEKHNAPATVPTQN 943

Query: 221  HEHEFILDEKKVDEGGLTRIKRCHCGFSIQFEEL 120
            HEHEFI+D++  DE    R+K+C CGFSIQFEEL
Sbjct: 944  HEHEFIMDDQTFDEESSLRVKKCWCGFSIQFEEL 977


>ref|XP_022884610.1| DNA repair protein RAD4 isoform X1 [Olea europaea var. sylvestris]
          Length = 990

 Score =  837 bits (2162), Expect = 0.0
 Identities = 444/707 (62%), Positives = 513/707 (72%), Gaps = 24/707 (3%)
 Frame = -2

Query: 2168 RFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPSCSSAYTVKPSPYVE-Q 1992
            RFVSILDV S+KPDA K  S+ +   K  + IF+SSTLMVAGPSC      K S + + Q
Sbjct: 289  RFVSILDVASMKPDAYKCSSTNSGVSKGGKGIFNSSTLMVAGPSCLFDSPSKLSSFDDMQ 348

Query: 1991 DSSQTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSEVPTDTSEPCLVKSEG 1812
              SQ  +RG+G   A+KS KHE QS    +TDK TD  S+ S +E  T  S P L++SEG
Sbjct: 349  KGSQCPVRGSGESMAEKSMKHEFQSHGIFVTDKSTDGKSD-SFTEAGTAASVPDLMESEG 407

Query: 1811 LKRKGDLEFQMQLEMALSATAVVNSHVSMA-SDAXXXXXXXXXXXXSKRMKKIRKEESQT 1635
            LKRKGDLEF+MQL++ALSATA+ +S  +MA S               KRMKKI  E S +
Sbjct: 408  LKRKGDLEFEMQLKIALSATAIESSKSTMAPSVVDSPSNSSTITPPYKRMKKIMTEGSSS 467

Query: 1634 CSNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDGEHKVEAAAAACKKS 1455
             SNGIST+IGSKKVGAPLYWAEVFC GENLTGKWVHVDAVNAIIDGE KVEAAA+ACKKS
Sbjct: 468  SSNGISTSIGSKKVGAPLYWAEVFCNGENLTGKWVHVDAVNAIIDGEQKVEAAASACKKS 527

Query: 1454 LRYVVAFAGHGAKDVTRR-------------YCTKWYKVAAQRINSTWWDAVLEPLKELE 1314
            LRYVVAFAGHGAKDVTRR             YCTKWYK+A+QRINSTWWD VL PLKELE
Sbjct: 528  LRYVVAFAGHGAKDVTRRFQIFDLIFAMLFWYCTKWYKIASQRINSTWWDRVLAPLKELE 587

Query: 1313 SGATGGVVSVECEASCQKKVEASQVEPSMSNSC--------GASMDSCEKKATESFMRNS 1158
            SGAT GV+++E EAS  +++EA +        C        G S + C  KA  S M+NS
Sbjct: 588  SGATSGVINLEQEASVGEEMEALRGADQSGRECLLKTKQLCGES-EECSDKAAVSLMKNS 646

Query: 1157 FASTRGSLEDMELETRALIEPLPTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGH 978
              ++R SLEDMELETRAL EPLPTNQQAY+NHHLY IERWLKKYEI+YPKGPVLGFCSGH
Sbjct: 647  VEASRSSLEDMELETRALTEPLPTNQQAYKNHHLYAIERWLKKYEIMYPKGPVLGFCSGH 706

Query: 977  SVYPRTCVQTLHTKERWLREGLQVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGIT 798
             VYPRTCVQTLHTKERWLREGLQVK  E+P KVLKRS+  SKE+A  D++Y+EVD +G  
Sbjct: 707  PVYPRTCVQTLHTKERWLREGLQVKVDELPAKVLKRSLNRSKEQAHVDDEYSEVDPEGTV 766

Query: 797  SLYGKWQTEPLCLPRAVNGIVPKNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDF 618
            SLYGKWQT+ LCLP+A+NGIVPKNERG+VDVWSEKCLPPGT+HLRLPRV  VA+RLDID+
Sbjct: 767  SLYGKWQTKKLCLPQAINGIVPKNERGRVDVWSEKCLPPGTVHLRLPRVGLVAKRLDIDY 826

Query: 617  APAMVGFDFRNGRSVPLFEGIVVCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALTRWYQ 438
            APAMVGF+FRNGRS P+ EGIVVC E+KDAIL                   A AL+RWYQ
Sbjct: 827  APAMVGFEFRNGRSFPVVEGIVVCAEYKDAILEAYAEEEERRMAEEKRRNEALALSRWYQ 886

Query: 437  LLSSIITRKRLNECYGDGALPQSSIEIPKSGDKCYNXXXXXXXXXXXXXSPECQQVNIP- 261
            LLSSIITR+RL  CYGDG   Q SI+IP   +K                SP C QVN P 
Sbjct: 887  LLSSIITRQRLKNCYGDGDSSQPSIDIPIPNNK---SCIPPSRTNQKNVSPRCHQVNTPD 943

Query: 260  EKLNAPSSMPTENHEHEFILDEKKVDEGGLTRIKRCHCGFSIQFEEL 120
            EK NAP+++PT+NHEHEFI+D++  DE    R+K+C CGFSIQFEEL
Sbjct: 944  EKHNAPATVPTQNHEHEFIMDDQTFDEESSLRVKKCWCGFSIQFEEL 990


>ref|XP_019182670.1| PREDICTED: DNA repair protein RAD4 [Ipomoea nil]
 ref|XP_019182671.1| PREDICTED: DNA repair protein RAD4 [Ipomoea nil]
 ref|XP_019182672.1| PREDICTED: DNA repair protein RAD4 [Ipomoea nil]
          Length = 984

 Score =  738 bits (1905), Expect = 0.0
 Identities = 400/706 (56%), Positives = 479/706 (67%), Gaps = 23/706 (3%)
 Frame = -2

Query: 2168 RFVSILDVISLKPDADK---SESSVADGCKNERDIFSSSTLMVAGPSCSSAYTVKPSPYV 1998
            RFVSILDV SLKP  DK   S+    D  +  RDIF++STLMVAG   SS     P  ++
Sbjct: 294  RFVSILDVASLKPGVDKPDLSDQGHQDPRRKGRDIFNTSTLMVAG---SSHPPESPEGHL 350

Query: 1997 EQDSSQTAIRG----AGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSEVPTDTSEPC 1830
                  +  +     A + K+ KS +   +S DS + D    ++ ++S SE   ++S+ C
Sbjct: 351  ASSDKGSVCKSPSSDAKKTKSGKSLRKTSKSSDSSLADTLKHRVLDLSTSEAQNNSSDTC 410

Query: 1829 LVKSEGLKRKGDLEFQMQLEMALSATAVVNSHVSMASDAXXXXXXXXXXXXSKRMKKIRK 1650
             ++ E  KRKGD+EF+MQLEMALSATA+ +S  +   +              KRMKKI+ 
Sbjct: 411  PMQREQPKRKGDVEFEMQLEMALSATAMESSRENFVPNVVEAHGTSSNHSPHKRMKKIKA 470

Query: 1649 EESQTCSNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDGEHKVEAAAA 1470
            EE    S+GISTAIGSKK+GAPLYWAEV+C  ENLTGKWVHVDAVNA++DGE  VEAAAA
Sbjct: 471  EECAASSHGISTAIGSKKIGAPLYWAEVYCSSENLTGKWVHVDAVNALVDGEQNVEAAAA 530

Query: 1469 ACKKSLRYVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEPLKELESGATGGVV 1290
            ACK  LRYV+AFAG+GAKDVTRRYCTKWYK+ ++R+NS WWDAVLEPLK+LE+GA   + 
Sbjct: 531  ACKIPLRYVIAFAGNGAKDVTRRYCTKWYKIVSKRVNSLWWDAVLEPLKKLEAGAVDDLS 590

Query: 1289 SVECEAS------------CQKKVEA---SQVEPSMSNSCGASMDSC-EKKATESFMRNS 1158
              + E S            C  K E    S   P   NS   +++ C EK+ ++S  R S
Sbjct: 591  HFKHEGSNGTESIKPLNGTCHPKREQPLESTTLPLKFNS--EALEECSEKRYSQSSSRAS 648

Query: 1157 FASTRGSLEDMELETRALIEPLPTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGH 978
             A++R  LEDMELETRAL EPLPTNQQAYR H LY IERWL KY+ILYPKGPVLGFCSGH
Sbjct: 649  VAASRSDLEDMELETRALTEPLPTNQQAYRTHQLYAIERWLNKYQILYPKGPVLGFCSGH 708

Query: 977  SVYPRTCVQTLHTKERWLREGLQVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGIT 798
             VYPRTCVQTLHTKERWLR+GLQVKA E+PVKVLKRS K SKE  G+D++ A  D  G T
Sbjct: 709  PVYPRTCVQTLHTKERWLRDGLQVKANELPVKVLKRSQKQSKELVGEDDESAAGDPSGTT 768

Query: 797  SLYGKWQTEPLCLPRAVNGIVPKNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDF 618
            +LYG+WQTEPLCLP AVNGIVPKNERGQVDVWSEKCLPPGT+HLRLPR+  VA+RL+ID+
Sbjct: 769  ALYGRWQTEPLCLPPAVNGIVPKNERGQVDVWSEKCLPPGTVHLRLPRIFVVAKRLEIDY 828

Query: 617  APAMVGFDFRNGRSVPLFEGIVVCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALTRWYQ 438
            APAMVGFDFRNGRSVP+FEGIVVCTEFKDAIL                   AQAL+RWYQ
Sbjct: 829  APAMVGFDFRNGRSVPVFEGIVVCTEFKDAILEAYAEEEERRQAEENRKAEAQALSRWYQ 888

Query: 437  LLSSIITRKRLNECYGDGALPQSSIEIPKSGDKCYNXXXXXXXXXXXXXSPECQQVNIPE 258
            LLSSIITR+RLN CY +G   QS+I+   S                   SPE +Q    E
Sbjct: 889  LLSSIITRQRLNNCYANGGPSQSTIDSESSA------KPGGSSSENQKMSPERKQ----E 938

Query: 257  KLNAPSSMPTENHEHEFILDEKKVDEGGLTRIKRCHCGFSIQFEEL 120
                     T++H+H F+LD++  DE   TR KRC CGFSIQFEE+
Sbjct: 939  SKAGAVPAETDHHQHLFLLDDQTFDEESSTRTKRCRCGFSIQFEEM 984


>ref|XP_011007252.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
            isoform X2 [Populus euphratica]
          Length = 847

 Score =  732 bits (1889), Expect = 0.0
 Identities = 392/693 (56%), Positives = 478/693 (68%), Gaps = 10/693 (1%)
 Frame = -2

Query: 2168 RFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPSCSSAYTVKPSPYVEQD 1989
            RFVSILDV S+KPDADK ES   D  K  R IFS+STLMV  P         PS   +++
Sbjct: 165  RFVSILDVASIKPDADKYESLNQDTSKMRRGIFSTSTLMVDRPKEVFIPPKSPSCSEKKN 224

Query: 1988 SSQTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSEVPTDTSEPCLVK-SEG 1812
             ++T+ + + + K + SR  ++QS DS    +  DKM +V   EV  +TSE C+ K S+G
Sbjct: 225  VAETSSKASCKSKDNCSRSKKIQSNDSPPAVELKDKMVDVFPCEVQNNTSEECVTKKSQG 284

Query: 1811 LKRKGDLEFQMQLEMALSATAVVNSHVSMASDAXXXXXXXXXXXXSKRMKKIRKEESQTC 1632
             KRKGDLEF+MQL+MA+SATAV                        KR++K   EES   
Sbjct: 285  SKRKGDLEFEMQLQMAMSATAVATQSNKELDVKESNSNSSDVSSPFKRIRKNANEESS-- 342

Query: 1631 SNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDGEHKVEAAAAACKKSL 1452
            S GISTA+GS+K+G+PLYWAEV+C GENLTGKWVHVDAV+ I+DGE KVEAAA ACK SL
Sbjct: 343  SQGISTALGSRKIGSPLYWAEVYCSGENLTGKWVHVDAVHDIVDGEQKVEAAADACKTSL 402

Query: 1451 RYVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEPLKELESGATGGVVSVE--- 1281
            RYVVAFAG GAKDVTRRYC KWYK+A+QR+NS WWDAVL PL+ELESGATGG+  +E   
Sbjct: 403  RYVVAFAGLGAKDVTRRYCMKWYKIASQRVNSHWWDAVLAPLRELESGATGGMAHLEKPH 462

Query: 1280 CEASCQKK--VEASQVEPSMSNSCGASMD----SCEKKATESFMRNSFASTRGSLEDMEL 1119
              AS + +  + +   +  M N   +++D    S  K   ES  RNSFA+TR ++EDMEL
Sbjct: 463  ANASNEHENVIASGLSDLPMPNELPSNVDLPKESGRKNDVESSGRNSFAATRNTIEDMEL 522

Query: 1118 ETRALIEPLPTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGHSVYPRTCVQTLHT 939
            ETRAL EPLPTNQQAY+NH LY IE+WL K +IL+PKGP+LGFCSGH VYPR CVQTL T
Sbjct: 523  ETRALTEPLPTNQQAYKNHSLYAIEKWLTKCQILHPKGPILGFCSGHPVYPRACVQTLRT 582

Query: 938  KERWLREGLQVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGITSLYGKWQTEPLCL 759
            KERWLREG+QVKA E+P KV+K+S K  K +  +D+DY E D  G+  LYG WQ EPL L
Sbjct: 583  KERWLREGMQVKAKELPAKVVKQSGKLKKVQFSEDDDYGETD-SGVVELYGMWQLEPLQL 641

Query: 758  PRAVNGIVPKNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDFAPAMVGFDFRNGR 579
            P AVNGIVPKNERGQVDVWSEKCLPPGT+HLRLPRV  VA+RL+ID+APAMVGF+FRNGR
Sbjct: 642  PHAVNGIVPKNERGQVDVWSEKCLPPGTVHLRLPRVFYVAKRLEIDYAPAMVGFEFRNGR 701

Query: 578  SVPLFEGIVVCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALTRWYQLLSSIITRKRLNE 399
            SVP+F+GIVVC EFKDAIL                   AQA++RWYQLLSSIITR+RLN 
Sbjct: 702  SVPVFDGIVVCNEFKDAILEAYAEEEERRDAEEKKRNEAQAISRWYQLLSSIITRQRLNN 761

Query: 398  CYGDGALPQSSIEIPKSGDKCYNXXXXXXXXXXXXXSPECQQVNIPEKLNAPSSMPTENH 219
             YG+G LPQ    +  + ++                 P  Q+ +   KLNAPS   T++H
Sbjct: 762  SYGNGLLPQMPSNVENTNNQ-------PDVHVGSTQPPGHQKDSKDRKLNAPSMTLTDDH 814

Query: 218  EHEFILDEKKVDEGGLTRIKRCHCGFSIQFEEL 120
            EH F+++++  DE   TR KRCHCGFS+Q EEL
Sbjct: 815  EHVFLVEDQSFDEQTSTRTKRCHCGFSVQVEEL 847


>ref|XP_011007251.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
            isoform X1 [Populus euphratica]
          Length = 966

 Score =  732 bits (1889), Expect = 0.0
 Identities = 392/693 (56%), Positives = 478/693 (68%), Gaps = 10/693 (1%)
 Frame = -2

Query: 2168 RFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPSCSSAYTVKPSPYVEQD 1989
            RFVSILDV S+KPDADK ES   D  K  R IFS+STLMV  P         PS   +++
Sbjct: 284  RFVSILDVASIKPDADKYESLNQDTSKMRRGIFSTSTLMVDRPKEVFIPPKSPSCSEKKN 343

Query: 1988 SSQTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSEVPTDTSEPCLVK-SEG 1812
             ++T+ + + + K + SR  ++QS DS    +  DKM +V   EV  +TSE C+ K S+G
Sbjct: 344  VAETSSKASCKSKDNCSRSKKIQSNDSPPAVELKDKMVDVFPCEVQNNTSEECVTKKSQG 403

Query: 1811 LKRKGDLEFQMQLEMALSATAVVNSHVSMASDAXXXXXXXXXXXXSKRMKKIRKEESQTC 1632
             KRKGDLEF+MQL+MA+SATAV                        KR++K   EES   
Sbjct: 404  SKRKGDLEFEMQLQMAMSATAVATQSNKELDVKESNSNSSDVSSPFKRIRKNANEESS-- 461

Query: 1631 SNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDGEHKVEAAAAACKKSL 1452
            S GISTA+GS+K+G+PLYWAEV+C GENLTGKWVHVDAV+ I+DGE KVEAAA ACK SL
Sbjct: 462  SQGISTALGSRKIGSPLYWAEVYCSGENLTGKWVHVDAVHDIVDGEQKVEAAADACKTSL 521

Query: 1451 RYVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEPLKELESGATGGVVSVE--- 1281
            RYVVAFAG GAKDVTRRYC KWYK+A+QR+NS WWDAVL PL+ELESGATGG+  +E   
Sbjct: 522  RYVVAFAGLGAKDVTRRYCMKWYKIASQRVNSHWWDAVLAPLRELESGATGGMAHLEKPH 581

Query: 1280 CEASCQKK--VEASQVEPSMSNSCGASMD----SCEKKATESFMRNSFASTRGSLEDMEL 1119
              AS + +  + +   +  M N   +++D    S  K   ES  RNSFA+TR ++EDMEL
Sbjct: 582  ANASNEHENVIASGLSDLPMPNELPSNVDLPKESGRKNDVESSGRNSFAATRNTIEDMEL 641

Query: 1118 ETRALIEPLPTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGHSVYPRTCVQTLHT 939
            ETRAL EPLPTNQQAY+NH LY IE+WL K +IL+PKGP+LGFCSGH VYPR CVQTL T
Sbjct: 642  ETRALTEPLPTNQQAYKNHSLYAIEKWLTKCQILHPKGPILGFCSGHPVYPRACVQTLRT 701

Query: 938  KERWLREGLQVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGITSLYGKWQTEPLCL 759
            KERWLREG+QVKA E+P KV+K+S K  K +  +D+DY E D  G+  LYG WQ EPL L
Sbjct: 702  KERWLREGMQVKAKELPAKVVKQSGKLKKVQFSEDDDYGETD-SGVVELYGMWQLEPLQL 760

Query: 758  PRAVNGIVPKNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDFAPAMVGFDFRNGR 579
            P AVNGIVPKNERGQVDVWSEKCLPPGT+HLRLPRV  VA+RL+ID+APAMVGF+FRNGR
Sbjct: 761  PHAVNGIVPKNERGQVDVWSEKCLPPGTVHLRLPRVFYVAKRLEIDYAPAMVGFEFRNGR 820

Query: 578  SVPLFEGIVVCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALTRWYQLLSSIITRKRLNE 399
            SVP+F+GIVVC EFKDAIL                   AQA++RWYQLLSSIITR+RLN 
Sbjct: 821  SVPVFDGIVVCNEFKDAILEAYAEEEERRDAEEKKRNEAQAISRWYQLLSSIITRQRLNN 880

Query: 398  CYGDGALPQSSIEIPKSGDKCYNXXXXXXXXXXXXXSPECQQVNIPEKLNAPSSMPTENH 219
             YG+G LPQ    +  + ++                 P  Q+ +   KLNAPS   T++H
Sbjct: 881  SYGNGLLPQMPSNVENTNNQ-------PDVHVGSTQPPGHQKDSKDRKLNAPSMTLTDDH 933

Query: 218  EHEFILDEKKVDEGGLTRIKRCHCGFSIQFEEL 120
            EH F+++++  DE   TR KRCHCGFS+Q EEL
Sbjct: 934  EHVFLVEDQSFDEQTSTRTKRCHCGFSVQVEEL 966


>ref|XP_024037763.1| DNA repair protein RAD4 isoform X2 [Citrus clementina]
          Length = 954

 Score =  721 bits (1860), Expect = 0.0
 Identities = 391/695 (56%), Positives = 468/695 (67%), Gaps = 12/695 (1%)
 Frame = -2

Query: 2168 RFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPSCSSAYTVKP-SPYVEQ 1992
            RFVSILDV SLKP+ADK+ SS  D  +    IF++ TLMVA P    A  VK  S   ++
Sbjct: 268  RFVSILDVASLKPEADKNVSSNQDSSRVGGGIFNAPTLMVAKPEEVLASPVKSFSCDKKE 327

Query: 1991 DSSQTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSEVPTDTSEPC--LVKS 1818
            +  +T+ +G    K    + +  QS+ S ++ + + +  + S S   +D SE C    KS
Sbjct: 328  NVCETSSKGLPECKYSSPKSNNTQSKKSPVSCELSSRNLDPSSSMACSDISEACHPKEKS 387

Query: 1817 EGLKRKGDLEFQMQLEMALSATAVVNSHVSMASDAXXXXXXXXXXXXSKRMKKIRKEESQ 1638
            + LKRKGDLEF+MQLEMALSAT V  S  ++ SD              KR+KKI   ES 
Sbjct: 388  QALKRKGDLEFEMQLEMALSATNVATSKSNICSDVKDLNSNSSTVLSVKRLKKIESGESS 447

Query: 1637 TCSNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDGEHKVEAAAAACKK 1458
            T   GISTA+GS+KVGAPLYWAEV+C GENLTGKWVHVDA NAIIDGE KVEAAAAACK 
Sbjct: 448  TSCLGISTAVGSRKVGAPLYWAEVYCSGENLTGKWVHVDAANAIIDGEQKVEAAAAACKT 507

Query: 1457 SLRYVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEPLKELESGATGGVVSVEC 1278
            SLRY+VAFAG GAKDVTRRYC KWY++A +R+NS WWDAVL PL+ELESGATGG+  +E 
Sbjct: 508  SLRYIVAFAGCGAKDVTRRYCMKWYRIAPKRVNSAWWDAVLAPLRELESGATGGMTQME- 566

Query: 1277 EASCQKKVEASQVEPSMSNSCGASMDSCEKKAT---------ESFMRNSFASTRGSLEDM 1125
                ++ V AS +  ++  S     DS     +         ES  ++SF + R SLEDM
Sbjct: 567  ----KRHVNASNILEALKTSNYPYRDSFPNHVSLYGDSDLNVESSAKDSFVADRNSLEDM 622

Query: 1124 ELETRALIEPLPTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGHSVYPRTCVQTL 945
            ELETRAL EPLPTNQQAY+NH LYVIERWL KY+ILYPKGP+LGFCSGH+VYPR+CVQTL
Sbjct: 623  ELETRALTEPLPTNQQAYKNHQLYVIERWLNKYQILYPKGPILGFCSGHAVYPRSCVQTL 682

Query: 944  HTKERWLREGLQVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGITSLYGKWQTEPL 765
             TKERWLRE LQVKA EVPVKV+K S K  K +  +  DY EVD +G   LYGKWQ EPL
Sbjct: 683  KTKERWLREALQVKANEVPVKVIKNSSKSKKGQDFEPEDYDEVDARGNIELYGKWQLEPL 742

Query: 764  CLPRAVNGIVPKNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDFAPAMVGFDFRN 585
             LP AVNGIVP+NERGQVDVWSEKCLPPGT+HLRLPRV +VA+RL+ID APAMVGF+FRN
Sbjct: 743  RLPSAVNGIVPRNERGQVDVWSEKCLPPGTVHLRLPRVYSVAKRLEIDSAPAMVGFEFRN 802

Query: 584  GRSVPLFEGIVVCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALTRWYQLLSSIITRKRL 405
            GRS P+F+GIVVC EFKD IL                   AQA +RWYQLLSSI+TR+RL
Sbjct: 803  GRSTPVFDGIVVCAEFKDTILEAYAEEEEKREAEEKKRREAQATSRWYQLLSSIVTRQRL 862

Query: 404  NECYGDGALPQSSIEIPKSGDKCYNXXXXXXXXXXXXXSPECQQVNIPEKLNAPSSMPTE 225
            N CYG+ +  QSS        K  N             SP  Q      KL+APS   +E
Sbjct: 863  NNCYGNNSTSQSSSNF--QNVKKTNSNVGVDSSQNDWQSPN-QVDRGDTKLHAPSPFQSE 919

Query: 224  NHEHEFILDEKKVDEGGLTRIKRCHCGFSIQFEEL 120
             HEH ++++++  DE      KRCHCGF+IQ EEL
Sbjct: 920  EHEHVYLIEDQSFDEENSVTTKRCHCGFTIQVEEL 954


>gb|PNT40262.1| hypothetical protein POPTR_004G087400v3 [Populus trichocarpa]
 gb|PNT40264.1| hypothetical protein POPTR_004G087400v3 [Populus trichocarpa]
          Length = 965

 Score =  721 bits (1861), Expect = 0.0
 Identities = 388/693 (55%), Positives = 476/693 (68%), Gaps = 10/693 (1%)
 Frame = -2

Query: 2168 RFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPSCSSAYTVKPSPYVEQD 1989
            RFVSILDV S+KPDADK ES      K  R IF++STLMV  P          S   +++
Sbjct: 284  RFVSILDVASIKPDADKYESLSQGTSKMHRGIFNTSTLMVDRPKEVFIPPKSLSCNEKKN 343

Query: 1988 SSQTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSEVPTDTSEPCLVK-SEG 1812
             ++T+ + + + K + SR  ++QS DS    +  DKM +    E   +TSE C+ K S+G
Sbjct: 344  VAETSSKTSCKSKDNCSRSKKIQSNDSPPAVELKDKMVDTFPCEAQNNTSEECVTKKSQG 403

Query: 1811 LKRKGDLEFQMQLEMALSATAVVNSHVSMASDAXXXXXXXXXXXXSKRMKKIRKEESQTC 1632
             KRKGDLEF+MQL+MA+SATAV     +   D              KR++KI  EES   
Sbjct: 404  SKRKGDLEFEMQLQMAMSATAVATQS-NKELDVKESSNSSDVSSPFKRIRKIANEESS-- 460

Query: 1631 SNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDGEHKVEAAAAACKKSL 1452
            S GISTA+GS+K+G+PLYWAEV+C GENLTGKWVHVDAV+ I+DGE KVEAAA ACK SL
Sbjct: 461  SQGISTALGSRKIGSPLYWAEVYCSGENLTGKWVHVDAVHDIVDGEQKVEAAADACKTSL 520

Query: 1451 RYVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEPLKELESGATGGVVSVE--- 1281
            RYVVAFAG GAKDVTRRYC KWYK+A+QR+NS WWDAVL PL+ELESGATGG+  +E   
Sbjct: 521  RYVVAFAGLGAKDVTRRYCMKWYKIASQRVNSLWWDAVLAPLRELESGATGGMAHLEKPH 580

Query: 1280 CEASCQKK--VEASQVEPSMSNSCGASMD----SCEKKATESFMRNSFASTRGSLEDMEL 1119
             +AS + +  + +   +  M N   +++D    S  K   ES  RNSFA+TR ++EDMEL
Sbjct: 581  ADASNEHENVIASGLSDLPMPNELPSNVDLPKESGRKNDVESSGRNSFAATRNTIEDMEL 640

Query: 1118 ETRALIEPLPTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGHSVYPRTCVQTLHT 939
            +TRAL EPLPTNQQAY+NH LY IE+WL K +IL+PKGP+LGFCSGH VYPR CVQTL T
Sbjct: 641  QTRALTEPLPTNQQAYKNHLLYAIEKWLTKCQILHPKGPILGFCSGHPVYPRACVQTLRT 700

Query: 938  KERWLREGLQVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGITSLYGKWQTEPLCL 759
            KERWLREGLQVK  E+P KV+K+S K  K +  +D+DY E D  G+  LYG WQ EPL L
Sbjct: 701  KERWLREGLQVKVKELPAKVVKQSGKLKKVQFSEDDDYGETD-SGVVELYGMWQLEPLQL 759

Query: 758  PRAVNGIVPKNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDFAPAMVGFDFRNGR 579
            P AVNGIVPKNERGQVDVWSEKCLPPGT+HLRLPRV  VA+RL+ID+APAMVGF+FRNGR
Sbjct: 760  PHAVNGIVPKNERGQVDVWSEKCLPPGTVHLRLPRVFYVAKRLEIDYAPAMVGFEFRNGR 819

Query: 578  SVPLFEGIVVCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALTRWYQLLSSIITRKRLNE 399
            SVP+F+GIVVC EFKDAIL                   AQA++RWYQLLSSIITR+RLN 
Sbjct: 820  SVPVFDGIVVCNEFKDAILEAYAEEEERRDAEEKKRNEAQAISRWYQLLSSIITRQRLNN 879

Query: 398  CYGDGALPQSSIEIPKSGDKCYNXXXXXXXXXXXXXSPECQQVNIPEKLNAPSSMPTENH 219
             YG+G LPQ    +  + ++                 P  Q+     KLNAPS   T++H
Sbjct: 880  SYGNGLLPQMPSNVQNTNNQ-------PDVHVGSTQPPGHQKDAKDRKLNAPSMTLTDDH 932

Query: 218  EHEFILDEKKVDEGGLTRIKRCHCGFSIQFEEL 120
            EH F+++++  DE   TR KRCHCGFS+Q EEL
Sbjct: 933  EHVFLVEDQSFDEETSTRTKRCHCGFSVQVEEL 965


>ref|XP_006430573.1| DNA repair protein RAD4 isoform X1 [Citrus clementina]
 gb|ESR43813.1| hypothetical protein CICLE_v10010990mg [Citrus clementina]
          Length = 974

 Score =  721 bits (1860), Expect = 0.0
 Identities = 391/695 (56%), Positives = 468/695 (67%), Gaps = 12/695 (1%)
 Frame = -2

Query: 2168 RFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPSCSSAYTVKP-SPYVEQ 1992
            RFVSILDV SLKP+ADK+ SS  D  +    IF++ TLMVA P    A  VK  S   ++
Sbjct: 288  RFVSILDVASLKPEADKNVSSNQDSSRVGGGIFNAPTLMVAKPEEVLASPVKSFSCDKKE 347

Query: 1991 DSSQTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSEVPTDTSEPC--LVKS 1818
            +  +T+ +G    K    + +  QS+ S ++ + + +  + S S   +D SE C    KS
Sbjct: 348  NVCETSSKGLPECKYSSPKSNNTQSKKSPVSCELSSRNLDPSSSMACSDISEACHPKEKS 407

Query: 1817 EGLKRKGDLEFQMQLEMALSATAVVNSHVSMASDAXXXXXXXXXXXXSKRMKKIRKEESQ 1638
            + LKRKGDLEF+MQLEMALSAT V  S  ++ SD              KR+KKI   ES 
Sbjct: 408  QALKRKGDLEFEMQLEMALSATNVATSKSNICSDVKDLNSNSSTVLSVKRLKKIESGESS 467

Query: 1637 TCSNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDGEHKVEAAAAACKK 1458
            T   GISTA+GS+KVGAPLYWAEV+C GENLTGKWVHVDA NAIIDGE KVEAAAAACK 
Sbjct: 468  TSCLGISTAVGSRKVGAPLYWAEVYCSGENLTGKWVHVDAANAIIDGEQKVEAAAAACKT 527

Query: 1457 SLRYVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEPLKELESGATGGVVSVEC 1278
            SLRY+VAFAG GAKDVTRRYC KWY++A +R+NS WWDAVL PL+ELESGATGG+  +E 
Sbjct: 528  SLRYIVAFAGCGAKDVTRRYCMKWYRIAPKRVNSAWWDAVLAPLRELESGATGGMTQME- 586

Query: 1277 EASCQKKVEASQVEPSMSNSCGASMDSCEKKAT---------ESFMRNSFASTRGSLEDM 1125
                ++ V AS +  ++  S     DS     +         ES  ++SF + R SLEDM
Sbjct: 587  ----KRHVNASNILEALKTSNYPYRDSFPNHVSLYGDSDLNVESSAKDSFVADRNSLEDM 642

Query: 1124 ELETRALIEPLPTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGHSVYPRTCVQTL 945
            ELETRAL EPLPTNQQAY+NH LYVIERWL KY+ILYPKGP+LGFCSGH+VYPR+CVQTL
Sbjct: 643  ELETRALTEPLPTNQQAYKNHQLYVIERWLNKYQILYPKGPILGFCSGHAVYPRSCVQTL 702

Query: 944  HTKERWLREGLQVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGITSLYGKWQTEPL 765
             TKERWLRE LQVKA EVPVKV+K S K  K +  +  DY EVD +G   LYGKWQ EPL
Sbjct: 703  KTKERWLREALQVKANEVPVKVIKNSSKSKKGQDFEPEDYDEVDARGNIELYGKWQLEPL 762

Query: 764  CLPRAVNGIVPKNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDFAPAMVGFDFRN 585
             LP AVNGIVP+NERGQVDVWSEKCLPPGT+HLRLPRV +VA+RL+ID APAMVGF+FRN
Sbjct: 763  RLPSAVNGIVPRNERGQVDVWSEKCLPPGTVHLRLPRVYSVAKRLEIDSAPAMVGFEFRN 822

Query: 584  GRSVPLFEGIVVCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALTRWYQLLSSIITRKRL 405
            GRS P+F+GIVVC EFKD IL                   AQA +RWYQLLSSI+TR+RL
Sbjct: 823  GRSTPVFDGIVVCAEFKDTILEAYAEEEEKREAEEKKRREAQATSRWYQLLSSIVTRQRL 882

Query: 404  NECYGDGALPQSSIEIPKSGDKCYNXXXXXXXXXXXXXSPECQQVNIPEKLNAPSSMPTE 225
            N CYG+ +  QSS        K  N             SP  Q      KL+APS   +E
Sbjct: 883  NNCYGNNSTSQSSSNF--QNVKKTNSNVGVDSSQNDWQSPN-QVDRGDTKLHAPSPFQSE 939

Query: 224  NHEHEFILDEKKVDEGGLTRIKRCHCGFSIQFEEL 120
             HEH ++++++  DE      KRCHCGF+IQ EEL
Sbjct: 940  EHEHVYLIEDQSFDEENSVTTKRCHCGFTIQVEEL 974


>dbj|GAY43724.1| hypothetical protein CUMW_076680 [Citrus unshiu]
          Length = 974

 Score =  719 bits (1855), Expect = 0.0
 Identities = 391/692 (56%), Positives = 469/692 (67%), Gaps = 9/692 (1%)
 Frame = -2

Query: 2168 RFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPSCSSAYTVKP-SPYVEQ 1992
            RFVSILDV SLKP+ADK+ SS  D  +    IF++ TLMVA P    A  VK  S   ++
Sbjct: 288  RFVSILDVASLKPEADKNVSSNQDSSRVGGGIFNAPTLMVAKPEEVLASPVKSFSCDKKE 347

Query: 1991 DSSQTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSEVPTDTSEPC--LVKS 1818
            +  +T+ +G+   K    + +  QS+ S ++ + + +  + S S   +D SE C    KS
Sbjct: 348  NVCETSSKGSPEYKYSSPKSNNTQSKKSPVSRELSSRNLDPSSSMAYSDISEACHPKEKS 407

Query: 1817 EGLKRKGDLEFQMQLEMALSATAVVNSHVSMASDAXXXXXXXXXXXXSKRMKKIRKEESQ 1638
            + LKRKGDLEF+MQLEMALSAT V  S  ++ SD              KR+KKI   ES 
Sbjct: 408  QALKRKGDLEFEMQLEMALSATNVGTSKSNICSDVKDLNSNSSTVLPVKRLKKIESGESS 467

Query: 1637 TCSNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDGEHKVEAAAAACKK 1458
            T   GISTA+GS+KVGAPLYWAEV+C GENLTGKWVHVDA NAIIDGE KVEAAAAACK 
Sbjct: 468  TSCLGISTAVGSRKVGAPLYWAEVYCSGENLTGKWVHVDAANAIIDGEQKVEAAAAACKT 527

Query: 1457 SLRYVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEPLKELESGATGGVVSVEC 1278
            SLRY+VAFAG GAKDVTRRYC KWY++A++R+NS WWDAVL PL+ELESGATGG+  +E 
Sbjct: 528  SLRYIVAFAGCGAKDVTRRYCMKWYRIASKRVNSAWWDAVLAPLRELESGATGGMTQMEM 587

Query: 1277 E-ASCQKKVEASQVE-----PSMSNSCGASMDSCEKKATESFMRNSFASTRGSLEDMELE 1116
               +    +EA +        S  N    S DS      ES  ++SF + R SLEDMELE
Sbjct: 588  RHVNASNTLEALKTSNYPYRDSFPNHVSLSGDS--DLNVESSAKDSFVADRNSLEDMELE 645

Query: 1115 TRALIEPLPTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGHSVYPRTCVQTLHTK 936
            TRAL EPLPTNQQAY+NH LYVIERWL KY+ILYPKGP+LGFCSGH+VYPR+CVQTL TK
Sbjct: 646  TRALTEPLPTNQQAYKNHQLYVIERWLNKYQILYPKGPILGFCSGHAVYPRSCVQTLKTK 705

Query: 935  ERWLREGLQVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGITSLYGKWQTEPLCLP 756
            ERWLRE LQVKA EVPVKV+K S K ++ +  +  DY EVD +G   LYGKWQ EPL LP
Sbjct: 706  ERWLREALQVKATEVPVKVIKNSSKSNRGQDFEPEDYDEVDARGNIELYGKWQLEPLRLP 765

Query: 755  RAVNGIVPKNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDFAPAMVGFDFRNGRS 576
             AVNGIVP+NERGQVDVWSEKCLPPGT+HLRLPRV +VA+RL+ID APAMVGF+FRNGRS
Sbjct: 766  SAVNGIVPRNERGQVDVWSEKCLPPGTVHLRLPRVYSVAKRLEIDSAPAMVGFEFRNGRS 825

Query: 575  VPLFEGIVVCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALTRWYQLLSSIITRKRLNEC 396
             P+F+GIVVC EFKD IL                   AQA +RWYQLLSSI+TR+RLN C
Sbjct: 826  TPVFDGIVVCAEFKDTILEAYAEEEEKREAEEKKRREAQATSRWYQLLSSIVTRQRLNNC 885

Query: 395  YGDGALPQSSIEIPKSGDKCYNXXXXXXXXXXXXXSPECQQVNIPEKLNAPSSMPTENHE 216
            YG+ +  QSS        K  N             SP  Q      KL+APS   +E HE
Sbjct: 886  YGNNSTSQSSSNF--QNVKKTNSNVGVDSSQNDWQSPN-QIDKGDTKLHAPSPAQSEEHE 942

Query: 215  HEFILDEKKVDEGGLTRIKRCHCGFSIQFEEL 120
            H ++++++  DE      KRCHCGF+IQ EEL
Sbjct: 943  HVYLIEDQSFDEENSVTTKRCHCGFTIQVEEL 974


>ref|XP_006482097.1| PREDICTED: DNA repair protein RAD4 isoform X2 [Citrus sinensis]
          Length = 954

 Score =  717 bits (1851), Expect = 0.0
 Identities = 390/692 (56%), Positives = 469/692 (67%), Gaps = 9/692 (1%)
 Frame = -2

Query: 2168 RFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPSCSSAYTVKP-SPYVEQ 1992
            RFVSILDV SLKP+ADK+ SS  D  +    IF++ TLMVA P    A  VK  S   ++
Sbjct: 268  RFVSILDVASLKPEADKNVSSNQDSSRVGGGIFNAPTLMVAKPEEVLASPVKSFSCDKKE 327

Query: 1991 DSSQTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSEVPTDTSEPC--LVKS 1818
            +  +T+ +G+   K    + +  QS+ S ++ + + +  + S S   +D SE C    KS
Sbjct: 328  NVCETSSKGSPEYKYSSPKSNNTQSKKSPVSRELSSRNLDPSSSMACSDISEACHPKEKS 387

Query: 1817 EGLKRKGDLEFQMQLEMALSATAVVNSHVSMASDAXXXXXXXXXXXXSKRMKKIRKEESQ 1638
            + LKRKGDLEF+MQLEMALSAT V  S  ++ SD              KR+KKI   ES 
Sbjct: 388  QALKRKGDLEFEMQLEMALSATNVGTSKSNICSDVKDLNSNSSTVLPVKRLKKIESGESS 447

Query: 1637 TCSNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDGEHKVEAAAAACKK 1458
            T   GISTA+GS+KVGAPLYWAEV+C GENLTGKWVHVDA NAIIDGE KVEAAAAACK 
Sbjct: 448  TSCLGISTAVGSRKVGAPLYWAEVYCSGENLTGKWVHVDAANAIIDGEQKVEAAAAACKT 507

Query: 1457 SLRYVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEPLKELESGATGGVVSVEC 1278
            SLRY+VAFAG GAKDVTRRYC KWY++A++R+NS WWDAVL PL+ELESGATGG+  +E 
Sbjct: 508  SLRYIVAFAGCGAKDVTRRYCMKWYRIASKRVNSAWWDAVLAPLRELESGATGGMTQMEM 567

Query: 1277 E-ASCQKKVEASQVE-----PSMSNSCGASMDSCEKKATESFMRNSFASTRGSLEDMELE 1116
               +    +EA +        S  N    S DS      ES  ++SF + R SLEDMELE
Sbjct: 568  RHVNASNTLEALKTSNYPYRDSFPNHVSLSGDS--DLNVESSAKDSFVADRNSLEDMELE 625

Query: 1115 TRALIEPLPTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGHSVYPRTCVQTLHTK 936
            TRAL EPLPTNQQAY+NH LYVIERWL KY+ILYPKGP+LGFCSGH+VYPR+CVQTL TK
Sbjct: 626  TRALTEPLPTNQQAYKNHQLYVIERWLNKYQILYPKGPILGFCSGHAVYPRSCVQTLKTK 685

Query: 935  ERWLREGLQVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGITSLYGKWQTEPLCLP 756
            ERWL+E LQVKA EVPVKV+K S K ++ +  +  DY EVD +G   LYGKWQ EPL LP
Sbjct: 686  ERWLQEALQVKATEVPVKVIKNSSKSNRGQDFEPEDYDEVDARGNIELYGKWQLEPLRLP 745

Query: 755  RAVNGIVPKNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDFAPAMVGFDFRNGRS 576
             AVNGIVP+NERGQVDVWSEKCLPPGT+HLRLPRV +VA+RL+ID APAMVGF+FRNGRS
Sbjct: 746  SAVNGIVPRNERGQVDVWSEKCLPPGTVHLRLPRVYSVAKRLEIDSAPAMVGFEFRNGRS 805

Query: 575  VPLFEGIVVCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALTRWYQLLSSIITRKRLNEC 396
             P+F+GIVVC EFKD IL                   AQA +RWYQLLSSI+TR+RLN C
Sbjct: 806  TPVFDGIVVCVEFKDTILEAYAEEEEKREAEEKKRREAQATSRWYQLLSSIVTRQRLNNC 865

Query: 395  YGDGALPQSSIEIPKSGDKCYNXXXXXXXXXXXXXSPECQQVNIPEKLNAPSSMPTENHE 216
            YG+ +  QSS        K  N             SP  Q      KL+APS   +E HE
Sbjct: 866  YGNNSTSQSSSNF--QNVKKTNSNVGVDSSQNDWQSPN-QIDKGDTKLHAPSPAQSEEHE 922

Query: 215  HEFILDEKKVDEGGLTRIKRCHCGFSIQFEEL 120
            H ++++++  DE      KRCHCGF+IQ EEL
Sbjct: 923  HVYLIEDQSFDEENSVTTKRCHCGFTIQVEEL 954


>ref|XP_009589685.1| PREDICTED: DNA repair protein RAD4 isoform X2 [Nicotiana
            tomentosiformis]
          Length = 858

 Score =  714 bits (1842), Expect = 0.0
 Identities = 390/686 (56%), Positives = 460/686 (67%), Gaps = 3/686 (0%)
 Frame = -2

Query: 2168 RFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPSCSSAYTVKPSPYVEQD 1989
            RFVSILDV SLKP+ +K   S     K    IF+SSTLMVA P  S     K        
Sbjct: 228  RFVSILDVASLKPEIEKPYPSGQSPSKAGSGIFNSSTLMVAAPKYSPLSPAKSL------ 281

Query: 1988 SSQTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSEVPTDTSEPCLVKSEGL 1809
                     G+   DKSR        + ITDK   +MS  S S+   D ++ C++K E  
Sbjct: 282  -------ADGKHYNDKSR--------ATITDKSNKRMSP-STSDALRDANDACIMKREQP 325

Query: 1808 KRKGDLEFQMQLEMALSATAVVNSHVSMASDAXXXXXXXXXXXXSKRMKKIRKEESQTCS 1629
            KRKGDLEF+MQLEMALS+TAV     +M S+              K+ KKI+ EE  T S
Sbjct: 326  KRKGDLEFEMQLEMALSSTAVEIVRNTMVSEVADVQSTSSNVSPFKK-KKIKAEECSTSS 384

Query: 1628 NGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDGEHKVEAAAAACKKSLR 1449
            +G+STA+GS+KVGAPLYWAEV+C GENLTGKWVHVD VNAI DGE  VEAAAAACK  LR
Sbjct: 385  HGLSTAVGSRKVGAPLYWAEVYCSGENLTGKWVHVDVVNAITDGELNVEAAAAACKSHLR 444

Query: 1448 YVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEPLKELESGATGGVVSVECEAS 1269
            YVVAFAG+GAKDVTRRYCTKWYK+A++R+NS WWDAVL PLKELES AT  VV +  E S
Sbjct: 445  YVVAFAGNGAKDVTRRYCTKWYKIASERVNSIWWDAVLAPLKELESVATSDVVHLRQETS 504

Query: 1268 CQ-KKVEASQVEPSMSNSCGASMDSCEKKATESFMRNSFASTRGSLEDMELETRALIEPL 1092
             + KK E +Q                              +TR SLEDMELETRAL EPL
Sbjct: 505  DESKKTEVAQS----------------------------TATRSSLEDMELETRALTEPL 536

Query: 1091 PTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGHSVYPRTCVQTLHTKERWLREGL 912
            PTNQQAYRNHHLY+IERWL KY+ILYPKGPVLGFCSGH VYPR+CVQTL  KE+WLREGL
Sbjct: 537  PTNQQAYRNHHLYIIERWLNKYQILYPKGPVLGFCSGHPVYPRSCVQTLKRKEKWLREGL 596

Query: 911  QVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGITSLYGKWQTEPLCLPRAVNGIVP 732
            QVKA E+P KVLK S K +KE+   D+DY E D  G  +LYG+WQTEPL LP AVNGIVP
Sbjct: 597  QVKANEIPAKVLKHSGKQNKEQDVKDDDYGEEDCGGTVALYGQWQTEPLFLPHAVNGIVP 656

Query: 731  KNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDFAPAMVGFDFRNGRSVPLFEGIV 552
            KNERGQVDVWSEKCLPPGT+HLRLPR+  VA+RL+IDFAPAMVGF+FRNGRS+P++EGIV
Sbjct: 657  KNERGQVDVWSEKCLPPGTVHLRLPRLVPVAKRLEIDFAPAMVGFEFRNGRSLPVYEGIV 716

Query: 551  VCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALTRWYQLLSSIITRKRLNECYGDGALPQ 372
            VC EFKDAIL                   A+AL+RWYQLL+S+ITR+RL+ CY DGA  Q
Sbjct: 717  VCIEFKDAILETYAEEEERRQANERKRSEAEALSRWYQLLASLITRQRLHNCYADGASSQ 776

Query: 371  SSIEIPKSGDKCYNXXXXXXXXXXXXXSPECQQ--VNIPEKLNAPSSMPTENHEHEFILD 198
            S+I    S DK                +PE QQ    I + + +PS++  E+HEH F+++
Sbjct: 777  SAINFATSNDK---SSLLARGTEDTKTTPEYQQEKSEIAQSI-SPSTVLAEDHEHVFLVE 832

Query: 197  EKKVDEGGLTRIKRCHCGFSIQFEEL 120
            ++ VDE   TR KRC CGFS+Q+EEL
Sbjct: 833  DQTVDEESSTRTKRCRCGFSVQYEEL 858


>ref|XP_006482096.1| PREDICTED: DNA repair protein RAD4 isoform X1 [Citrus sinensis]
          Length = 974

 Score =  717 bits (1851), Expect = 0.0
 Identities = 390/692 (56%), Positives = 469/692 (67%), Gaps = 9/692 (1%)
 Frame = -2

Query: 2168 RFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPSCSSAYTVKP-SPYVEQ 1992
            RFVSILDV SLKP+ADK+ SS  D  +    IF++ TLMVA P    A  VK  S   ++
Sbjct: 288  RFVSILDVASLKPEADKNVSSNQDSSRVGGGIFNAPTLMVAKPEEVLASPVKSFSCDKKE 347

Query: 1991 DSSQTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSEVPTDTSEPC--LVKS 1818
            +  +T+ +G+   K    + +  QS+ S ++ + + +  + S S   +D SE C    KS
Sbjct: 348  NVCETSSKGSPEYKYSSPKSNNTQSKKSPVSRELSSRNLDPSSSMACSDISEACHPKEKS 407

Query: 1817 EGLKRKGDLEFQMQLEMALSATAVVNSHVSMASDAXXXXXXXXXXXXSKRMKKIRKEESQ 1638
            + LKRKGDLEF+MQLEMALSAT V  S  ++ SD              KR+KKI   ES 
Sbjct: 408  QALKRKGDLEFEMQLEMALSATNVGTSKSNICSDVKDLNSNSSTVLPVKRLKKIESGESS 467

Query: 1637 TCSNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDGEHKVEAAAAACKK 1458
            T   GISTA+GS+KVGAPLYWAEV+C GENLTGKWVHVDA NAIIDGE KVEAAAAACK 
Sbjct: 468  TSCLGISTAVGSRKVGAPLYWAEVYCSGENLTGKWVHVDAANAIIDGEQKVEAAAAACKT 527

Query: 1457 SLRYVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEPLKELESGATGGVVSVEC 1278
            SLRY+VAFAG GAKDVTRRYC KWY++A++R+NS WWDAVL PL+ELESGATGG+  +E 
Sbjct: 528  SLRYIVAFAGCGAKDVTRRYCMKWYRIASKRVNSAWWDAVLAPLRELESGATGGMTQMEM 587

Query: 1277 E-ASCQKKVEASQVE-----PSMSNSCGASMDSCEKKATESFMRNSFASTRGSLEDMELE 1116
               +    +EA +        S  N    S DS      ES  ++SF + R SLEDMELE
Sbjct: 588  RHVNASNTLEALKTSNYPYRDSFPNHVSLSGDS--DLNVESSAKDSFVADRNSLEDMELE 645

Query: 1115 TRALIEPLPTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGHSVYPRTCVQTLHTK 936
            TRAL EPLPTNQQAY+NH LYVIERWL KY+ILYPKGP+LGFCSGH+VYPR+CVQTL TK
Sbjct: 646  TRALTEPLPTNQQAYKNHQLYVIERWLNKYQILYPKGPILGFCSGHAVYPRSCVQTLKTK 705

Query: 935  ERWLREGLQVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGITSLYGKWQTEPLCLP 756
            ERWL+E LQVKA EVPVKV+K S K ++ +  +  DY EVD +G   LYGKWQ EPL LP
Sbjct: 706  ERWLQEALQVKATEVPVKVIKNSSKSNRGQDFEPEDYDEVDARGNIELYGKWQLEPLRLP 765

Query: 755  RAVNGIVPKNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDFAPAMVGFDFRNGRS 576
             AVNGIVP+NERGQVDVWSEKCLPPGT+HLRLPRV +VA+RL+ID APAMVGF+FRNGRS
Sbjct: 766  SAVNGIVPRNERGQVDVWSEKCLPPGTVHLRLPRVYSVAKRLEIDSAPAMVGFEFRNGRS 825

Query: 575  VPLFEGIVVCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALTRWYQLLSSIITRKRLNEC 396
             P+F+GIVVC EFKD IL                   AQA +RWYQLLSSI+TR+RLN C
Sbjct: 826  TPVFDGIVVCVEFKDTILEAYAEEEEKREAEEKKRREAQATSRWYQLLSSIVTRQRLNNC 885

Query: 395  YGDGALPQSSIEIPKSGDKCYNXXXXXXXXXXXXXSPECQQVNIPEKLNAPSSMPTENHE 216
            YG+ +  QSS        K  N             SP  Q      KL+APS   +E HE
Sbjct: 886  YGNNSTSQSSSNF--QNVKKTNSNVGVDSSQNDWQSPN-QIDKGDTKLHAPSPAQSEEHE 942

Query: 215  HEFILDEKKVDEGGLTRIKRCHCGFSIQFEEL 120
            H ++++++  DE      KRCHCGF+IQ EEL
Sbjct: 943  HVYLIEDQSFDEENSVTTKRCHCGFTIQVEEL 974


>ref|XP_016499274.1| PREDICTED: DNA repair protein RAD4-like isoform X2 [Nicotiana
            tabacum]
          Length = 858

 Score =  712 bits (1839), Expect = 0.0
 Identities = 390/686 (56%), Positives = 459/686 (66%), Gaps = 3/686 (0%)
 Frame = -2

Query: 2168 RFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPSCSSAYTVKPSPYVEQD 1989
            RFVSILDV SLKP+ +K   S     K    IF+SSTLMVA P  S     K        
Sbjct: 228  RFVSILDVASLKPEIEKPYPSGQSPSKAGSGIFNSSTLMVAAPKYSPLSPAKSL------ 281

Query: 1988 SSQTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSEVPTDTSEPCLVKSEGL 1809
                     G+   DKSR        + ITDK   +MS  S S+   D ++ C++K E  
Sbjct: 282  -------ADGKHYNDKSR--------ATITDKSNKRMSP-STSDALRDANDACIMKREQP 325

Query: 1808 KRKGDLEFQMQLEMALSATAVVNSHVSMASDAXXXXXXXXXXXXSKRMKKIRKEESQTCS 1629
            KRKGDLEF+MQLEMALS+TAV     +M S+              K+ KKI+ EE  T S
Sbjct: 326  KRKGDLEFEMQLEMALSSTAVEIVRNTMVSEVADVQSTSSNVSPFKK-KKIKAEECSTSS 384

Query: 1628 NGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDGEHKVEAAAAACKKSLR 1449
            +G+STA+GS+KVGAPLYWAEV+C GENLTGKWVHVD VNAI DGE  VEAAAAACK  LR
Sbjct: 385  HGLSTAVGSRKVGAPLYWAEVYCSGENLTGKWVHVDVVNAITDGELNVEAAAAACKSHLR 444

Query: 1448 YVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEPLKELESGATGGVVSVECEAS 1269
            YVVAFAG+GAKDVTRRYCTKWYK+A++R+NS WWDAVL PLKELES AT  VV +  E S
Sbjct: 445  YVVAFAGNGAKDVTRRYCTKWYKIASERVNSIWWDAVLAPLKELESVATSDVVHLRQETS 504

Query: 1268 CQ-KKVEASQVEPSMSNSCGASMDSCEKKATESFMRNSFASTRGSLEDMELETRALIEPL 1092
             + KK E +Q                              +TR SLEDMELETRAL EPL
Sbjct: 505  DESKKTEVAQS----------------------------TATRSSLEDMELETRALTEPL 536

Query: 1091 PTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGHSVYPRTCVQTLHTKERWLREGL 912
            PTNQQAYRNHHLY+IERWL KY+ILYPKGPVLGFCSGH VYPR+CVQTL  KE+WLREGL
Sbjct: 537  PTNQQAYRNHHLYIIERWLNKYQILYPKGPVLGFCSGHPVYPRSCVQTLKRKEKWLREGL 596

Query: 911  QVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGITSLYGKWQTEPLCLPRAVNGIVP 732
            QVKA E+P KVLK S K  KE+   D+DY E D  G  +LYG+WQTEPL LP AVNGIVP
Sbjct: 597  QVKANEIPAKVLKHSGKQKKEQDVKDDDYGEEDCGGTVALYGQWQTEPLFLPPAVNGIVP 656

Query: 731  KNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDFAPAMVGFDFRNGRSVPLFEGIV 552
            KNERGQVDVWSEKCLPPGT+HLRLPR+  VA+RL+IDFAPAMVGF+FRNGRS+P++EGIV
Sbjct: 657  KNERGQVDVWSEKCLPPGTVHLRLPRLVPVAKRLEIDFAPAMVGFEFRNGRSLPVYEGIV 716

Query: 551  VCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALTRWYQLLSSIITRKRLNECYGDGALPQ 372
            VC EFKDAIL                   A+AL+RWYQLL+S+ITR+RL+ CY DGA  Q
Sbjct: 717  VCIEFKDAILETYAEEEERRQANERKRSEAEALSRWYQLLASLITRQRLHNCYADGASSQ 776

Query: 371  SSIEIPKSGDKCYNXXXXXXXXXXXXXSPECQQ--VNIPEKLNAPSSMPTENHEHEFILD 198
            S+I    S DK                +PE QQ    I + + +PS++  E+HEH F+++
Sbjct: 777  SAINFATSNDK---SSLLARGTEDTKTTPEYQQEKSEIAQSI-SPSTVLAEDHEHVFLVE 832

Query: 197  EKKVDEGGLTRIKRCHCGFSIQFEEL 120
            ++ VDE   TR KRC CGFS+Q+EEL
Sbjct: 833  DQTVDEESSTRTKRCRCGFSVQYEEL 858


>gb|EOY03915.1| DNA repair protein xp-C / rad4, putative isoform 2 [Theobroma cacao]
          Length = 908

 Score =  714 bits (1842), Expect = 0.0
 Identities = 389/708 (54%), Positives = 476/708 (67%), Gaps = 25/708 (3%)
 Frame = -2

Query: 2168 RFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPS--CSSAYTVKPSPYVE 1995
            RFVSILDV SLKP+ADK E S  +  +    IFS+STLMVA P    SS+Y VK     E
Sbjct: 204  RFVSILDVASLKPEADKCEPSSQEANRVGGGIFSTSTLMVANPKEVSSSSYPVKSFSCSE 263

Query: 1994 QDSS-QTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSEVPTDTSEPCL-VK 1821
            +D   + ++R + + K      ++ QS+ S   D+ TD+ S +   +   DT   C   K
Sbjct: 264  KDGHCENSLRSSCKSKGGCPTSNDTQSRYSTAVDEVTDRTSNLFACQAQLDTYGQCAPTK 323

Query: 1820 SEGLKRKGDLEFQMQLEMALSATAV---VNSHVSMASDAXXXXXXXXXXXXSKRMKKIRK 1650
            S+GLKRKGDLEF+MQL MA+SAT V    NS  S+                SKR KKI +
Sbjct: 324  SQGLKRKGDLEFEMQLAMAISATTVGTLENSAGSLDVSNFNGNNSLDASTPSKRWKKIHR 383

Query: 1649 EESQTCSNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDGEHKVEAAAA 1470
             ES T S G+STA+GS+KVG+PL+WAEV+CGGENLTGKWVHVDA+NAIIDGE KVE AAA
Sbjct: 384  VESATSSQGLSTALGSRKVGSPLFWAEVYCGGENLTGKWVHVDALNAIIDGEQKVEDAAA 443

Query: 1469 ACKKSLRYVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEPLKELESGATGGVV 1290
            ACK +LRYVVAFAG GAKDVTRRYC KWYK+A +R+NS WWDAVL PL+ELESGATGG +
Sbjct: 444  ACKTALRYVVAFAGRGAKDVTRRYCMKWYKIAPKRVNSIWWDAVLAPLRELESGATGGTI 503

Query: 1289 SVEC----EASCQKKVEASQVEP-----SMSNSC--------GASMDSCEKKATESFMRN 1161
            ++E      ++ Q+K++AS +       S SN           A  +   K   ES  ++
Sbjct: 504  NMEKLHNNASNEQEKIKASGMSEYPGTDSPSNHVILPEKSGQEAFKEYGSKSEVESSTKH 563

Query: 1160 SFASTRGSLEDMELETRALIEPLPTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSG 981
            S  +TR SLEDMELETRAL EPLPTNQQAY+NH LY +ERWL K +IL+P+GP+LG+CSG
Sbjct: 564  SLVATRNSLEDMELETRALTEPLPTNQQAYKNHALYALERWLTKCQILHPRGPILGYCSG 623

Query: 980  HSVYPRTCVQTLHTKERWLREGLQVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGI 801
            H VYPRTCVQTL  +ERWLREGLQVK  E+P KVLKRS K  K +  +++DY E+D +G 
Sbjct: 624  HPVYPRTCVQTLKPRERWLREGLQVKGNEIPAKVLKRSAKLKKVQVSEEDDYEEIDSKGT 683

Query: 800  TSLYGKWQTEPLCLPRAVNGIVPKNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDID 621
              LYGKWQ EPLCLP AV+GIVPKNERGQVDVWSEKCLPPGT+HLRLPRV +VA+RL+ID
Sbjct: 684  IELYGKWQLEPLCLPHAVDGIVPKNERGQVDVWSEKCLPPGTVHLRLPRVFSVAKRLEID 743

Query: 620  FAPAMVGFDFRNGRSVPLFEGIVVCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALTRWY 441
            +APAMVGF+FRNGR+ P+F+GIVVC+EFKDAIL                   AQA++RWY
Sbjct: 744  YAPAMVGFEFRNGRAAPIFDGIVVCSEFKDAILEAYAEEEERRVAEEKKRNEAQAISRWY 803

Query: 440  QLLSSIITRKRLNECYGDGALPQSSIEIPKSGDKCYNXXXXXXXXXXXXXSPECQQVNIP 261
            QLLSSIITR++L   YGDG+  Q+S  I    DK                S    + +  
Sbjct: 804  QLLSSIITRQKLKSYYGDGSSSQASRNIQ---DKNNEINAPDESSKDDRQSTGLWKGDGE 860

Query: 260  EKL-NAPSSMPTENHEHEFILDEKKVDEGGLTRIKRCHCGFSIQFEEL 120
            + L N PS    E+HEH F+ + +  D     R KRCHCGFSIQ EEL
Sbjct: 861  DTLCNIPSGTLVEDHEHVFLRENESFDAENSVRTKRCHCGFSIQVEEL 908


>ref|XP_009589684.1| PREDICTED: DNA repair protein RAD4 isoform X1 [Nicotiana
            tomentosiformis]
          Length = 932

 Score =  714 bits (1842), Expect = 0.0
 Identities = 390/686 (56%), Positives = 460/686 (67%), Gaps = 3/686 (0%)
 Frame = -2

Query: 2168 RFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPSCSSAYTVKPSPYVEQD 1989
            RFVSILDV SLKP+ +K   S     K    IF+SSTLMVA P  S     K        
Sbjct: 302  RFVSILDVASLKPEIEKPYPSGQSPSKAGSGIFNSSTLMVAAPKYSPLSPAKSL------ 355

Query: 1988 SSQTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSEVPTDTSEPCLVKSEGL 1809
                     G+   DKSR        + ITDK   +MS  S S+   D ++ C++K E  
Sbjct: 356  -------ADGKHYNDKSR--------ATITDKSNKRMSP-STSDALRDANDACIMKREQP 399

Query: 1808 KRKGDLEFQMQLEMALSATAVVNSHVSMASDAXXXXXXXXXXXXSKRMKKIRKEESQTCS 1629
            KRKGDLEF+MQLEMALS+TAV     +M S+              K+ KKI+ EE  T S
Sbjct: 400  KRKGDLEFEMQLEMALSSTAVEIVRNTMVSEVADVQSTSSNVSPFKK-KKIKAEECSTSS 458

Query: 1628 NGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDGEHKVEAAAAACKKSLR 1449
            +G+STA+GS+KVGAPLYWAEV+C GENLTGKWVHVD VNAI DGE  VEAAAAACK  LR
Sbjct: 459  HGLSTAVGSRKVGAPLYWAEVYCSGENLTGKWVHVDVVNAITDGELNVEAAAAACKSHLR 518

Query: 1448 YVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEPLKELESGATGGVVSVECEAS 1269
            YVVAFAG+GAKDVTRRYCTKWYK+A++R+NS WWDAVL PLKELES AT  VV +  E S
Sbjct: 519  YVVAFAGNGAKDVTRRYCTKWYKIASERVNSIWWDAVLAPLKELESVATSDVVHLRQETS 578

Query: 1268 CQ-KKVEASQVEPSMSNSCGASMDSCEKKATESFMRNSFASTRGSLEDMELETRALIEPL 1092
             + KK E +Q                              +TR SLEDMELETRAL EPL
Sbjct: 579  DESKKTEVAQS----------------------------TATRSSLEDMELETRALTEPL 610

Query: 1091 PTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGHSVYPRTCVQTLHTKERWLREGL 912
            PTNQQAYRNHHLY+IERWL KY+ILYPKGPVLGFCSGH VYPR+CVQTL  KE+WLREGL
Sbjct: 611  PTNQQAYRNHHLYIIERWLNKYQILYPKGPVLGFCSGHPVYPRSCVQTLKRKEKWLREGL 670

Query: 911  QVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGITSLYGKWQTEPLCLPRAVNGIVP 732
            QVKA E+P KVLK S K +KE+   D+DY E D  G  +LYG+WQTEPL LP AVNGIVP
Sbjct: 671  QVKANEIPAKVLKHSGKQNKEQDVKDDDYGEEDCGGTVALYGQWQTEPLFLPHAVNGIVP 730

Query: 731  KNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDFAPAMVGFDFRNGRSVPLFEGIV 552
            KNERGQVDVWSEKCLPPGT+HLRLPR+  VA+RL+IDFAPAMVGF+FRNGRS+P++EGIV
Sbjct: 731  KNERGQVDVWSEKCLPPGTVHLRLPRLVPVAKRLEIDFAPAMVGFEFRNGRSLPVYEGIV 790

Query: 551  VCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALTRWYQLLSSIITRKRLNECYGDGALPQ 372
            VC EFKDAIL                   A+AL+RWYQLL+S+ITR+RL+ CY DGA  Q
Sbjct: 791  VCIEFKDAILETYAEEEERRQANERKRSEAEALSRWYQLLASLITRQRLHNCYADGASSQ 850

Query: 371  SSIEIPKSGDKCYNXXXXXXXXXXXXXSPECQQ--VNIPEKLNAPSSMPTENHEHEFILD 198
            S+I    S DK                +PE QQ    I + + +PS++  E+HEH F+++
Sbjct: 851  SAINFATSNDK---SSLLARGTEDTKTTPEYQQEKSEIAQSI-SPSTVLAEDHEHVFLVE 906

Query: 197  EKKVDEGGLTRIKRCHCGFSIQFEEL 120
            ++ VDE   TR KRC CGFS+Q+EEL
Sbjct: 907  DQTVDEESSTRTKRCRCGFSVQYEEL 932


>ref|XP_016499273.1| PREDICTED: DNA repair protein RAD4-like isoform X1 [Nicotiana
            tabacum]
          Length = 932

 Score =  712 bits (1839), Expect = 0.0
 Identities = 390/686 (56%), Positives = 459/686 (66%), Gaps = 3/686 (0%)
 Frame = -2

Query: 2168 RFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPSCSSAYTVKPSPYVEQD 1989
            RFVSILDV SLKP+ +K   S     K    IF+SSTLMVA P  S     K        
Sbjct: 302  RFVSILDVASLKPEIEKPYPSGQSPSKAGSGIFNSSTLMVAAPKYSPLSPAKSL------ 355

Query: 1988 SSQTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSEVPTDTSEPCLVKSEGL 1809
                     G+   DKSR        + ITDK   +MS  S S+   D ++ C++K E  
Sbjct: 356  -------ADGKHYNDKSR--------ATITDKSNKRMSP-STSDALRDANDACIMKREQP 399

Query: 1808 KRKGDLEFQMQLEMALSATAVVNSHVSMASDAXXXXXXXXXXXXSKRMKKIRKEESQTCS 1629
            KRKGDLEF+MQLEMALS+TAV     +M S+              K+ KKI+ EE  T S
Sbjct: 400  KRKGDLEFEMQLEMALSSTAVEIVRNTMVSEVADVQSTSSNVSPFKK-KKIKAEECSTSS 458

Query: 1628 NGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDGEHKVEAAAAACKKSLR 1449
            +G+STA+GS+KVGAPLYWAEV+C GENLTGKWVHVD VNAI DGE  VEAAAAACK  LR
Sbjct: 459  HGLSTAVGSRKVGAPLYWAEVYCSGENLTGKWVHVDVVNAITDGELNVEAAAAACKSHLR 518

Query: 1448 YVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEPLKELESGATGGVVSVECEAS 1269
            YVVAFAG+GAKDVTRRYCTKWYK+A++R+NS WWDAVL PLKELES AT  VV +  E S
Sbjct: 519  YVVAFAGNGAKDVTRRYCTKWYKIASERVNSIWWDAVLAPLKELESVATSDVVHLRQETS 578

Query: 1268 CQ-KKVEASQVEPSMSNSCGASMDSCEKKATESFMRNSFASTRGSLEDMELETRALIEPL 1092
             + KK E +Q                              +TR SLEDMELETRAL EPL
Sbjct: 579  DESKKTEVAQS----------------------------TATRSSLEDMELETRALTEPL 610

Query: 1091 PTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSGHSVYPRTCVQTLHTKERWLREGL 912
            PTNQQAYRNHHLY+IERWL KY+ILYPKGPVLGFCSGH VYPR+CVQTL  KE+WLREGL
Sbjct: 611  PTNQQAYRNHHLYIIERWLNKYQILYPKGPVLGFCSGHPVYPRSCVQTLKRKEKWLREGL 670

Query: 911  QVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGITSLYGKWQTEPLCLPRAVNGIVP 732
            QVKA E+P KVLK S K  KE+   D+DY E D  G  +LYG+WQTEPL LP AVNGIVP
Sbjct: 671  QVKANEIPAKVLKHSGKQKKEQDVKDDDYGEEDCGGTVALYGQWQTEPLFLPPAVNGIVP 730

Query: 731  KNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDIDFAPAMVGFDFRNGRSVPLFEGIV 552
            KNERGQVDVWSEKCLPPGT+HLRLPR+  VA+RL+IDFAPAMVGF+FRNGRS+P++EGIV
Sbjct: 731  KNERGQVDVWSEKCLPPGTVHLRLPRLVPVAKRLEIDFAPAMVGFEFRNGRSLPVYEGIV 790

Query: 551  VCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALTRWYQLLSSIITRKRLNECYGDGALPQ 372
            VC EFKDAIL                   A+AL+RWYQLL+S+ITR+RL+ CY DGA  Q
Sbjct: 791  VCIEFKDAILETYAEEEERRQANERKRSEAEALSRWYQLLASLITRQRLHNCYADGASSQ 850

Query: 371  SSIEIPKSGDKCYNXXXXXXXXXXXXXSPECQQ--VNIPEKLNAPSSMPTENHEHEFILD 198
            S+I    S DK                +PE QQ    I + + +PS++  E+HEH F+++
Sbjct: 851  SAINFATSNDK---SSLLARGTEDTKTTPEYQQEKSEIAQSI-SPSTVLAEDHEHVFLVE 906

Query: 197  EKKVDEGGLTRIKRCHCGFSIQFEEL 120
            ++ VDE   TR KRC CGFS+Q+EEL
Sbjct: 907  DQTVDEESSTRTKRCRCGFSVQYEEL 932


>gb|EOY03914.1| DNA repair protein xp-C / rad4, putative isoform 1 [Theobroma cacao]
          Length = 974

 Score =  714 bits (1842), Expect = 0.0
 Identities = 389/708 (54%), Positives = 476/708 (67%), Gaps = 25/708 (3%)
 Frame = -2

Query: 2168 RFVSILDVISLKPDADKSESSVADGCKNERDIFSSSTLMVAGPS--CSSAYTVKPSPYVE 1995
            RFVSILDV SLKP+ADK E S  +  +    IFS+STLMVA P    SS+Y VK     E
Sbjct: 270  RFVSILDVASLKPEADKCEPSSQEANRVGGGIFSTSTLMVANPKEVSSSSYPVKSFSCSE 329

Query: 1994 QDSS-QTAIRGAGRQKADKSRKHELQSQDSLITDKPTDKMSEVSVSEVPTDTSEPCL-VK 1821
            +D   + ++R + + K      ++ QS+ S   D+ TD+ S +   +   DT   C   K
Sbjct: 330  KDGHCENSLRSSCKSKGGCPTSNDTQSRYSTAVDEVTDRTSNLFACQAQLDTYGQCAPTK 389

Query: 1820 SEGLKRKGDLEFQMQLEMALSATAV---VNSHVSMASDAXXXXXXXXXXXXSKRMKKIRK 1650
            S+GLKRKGDLEF+MQL MA+SAT V    NS  S+                SKR KKI +
Sbjct: 390  SQGLKRKGDLEFEMQLAMAISATTVGTLENSAGSLDVSNFNGNNSLDASTPSKRWKKIHR 449

Query: 1649 EESQTCSNGISTAIGSKKVGAPLYWAEVFCGGENLTGKWVHVDAVNAIIDGEHKVEAAAA 1470
             ES T S G+STA+GS+KVG+PL+WAEV+CGGENLTGKWVHVDA+NAIIDGE KVE AAA
Sbjct: 450  VESATSSQGLSTALGSRKVGSPLFWAEVYCGGENLTGKWVHVDALNAIIDGEQKVEDAAA 509

Query: 1469 ACKKSLRYVVAFAGHGAKDVTRRYCTKWYKVAAQRINSTWWDAVLEPLKELESGATGGVV 1290
            ACK +LRYVVAFAG GAKDVTRRYC KWYK+A +R+NS WWDAVL PL+ELESGATGG +
Sbjct: 510  ACKTALRYVVAFAGRGAKDVTRRYCMKWYKIAPKRVNSIWWDAVLAPLRELESGATGGTI 569

Query: 1289 SVEC----EASCQKKVEASQVEP-----SMSNSC--------GASMDSCEKKATESFMRN 1161
            ++E      ++ Q+K++AS +       S SN           A  +   K   ES  ++
Sbjct: 570  NMEKLHNNASNEQEKIKASGMSEYPGTDSPSNHVILPEKSGQEAFKEYGSKSEVESSTKH 629

Query: 1160 SFASTRGSLEDMELETRALIEPLPTNQQAYRNHHLYVIERWLKKYEILYPKGPVLGFCSG 981
            S  +TR SLEDMELETRAL EPLPTNQQAY+NH LY +ERWL K +IL+P+GP+LG+CSG
Sbjct: 630  SLVATRNSLEDMELETRALTEPLPTNQQAYKNHALYALERWLTKCQILHPRGPILGYCSG 689

Query: 980  HSVYPRTCVQTLHTKERWLREGLQVKAGEVPVKVLKRSMKCSKEEAGDDNDYAEVDHQGI 801
            H VYPRTCVQTL  +ERWLREGLQVK  E+P KVLKRS K  K +  +++DY E+D +G 
Sbjct: 690  HPVYPRTCVQTLKPRERWLREGLQVKGNEIPAKVLKRSAKLKKVQVSEEDDYEEIDSKGT 749

Query: 800  TSLYGKWQTEPLCLPRAVNGIVPKNERGQVDVWSEKCLPPGTIHLRLPRVATVARRLDID 621
              LYGKWQ EPLCLP AV+GIVPKNERGQVDVWSEKCLPPGT+HLRLPRV +VA+RL+ID
Sbjct: 750  IELYGKWQLEPLCLPHAVDGIVPKNERGQVDVWSEKCLPPGTVHLRLPRVFSVAKRLEID 809

Query: 620  FAPAMVGFDFRNGRSVPLFEGIVVCTEFKDAILXXXXXXXXXXXXXXXXXXXAQALTRWY 441
            +APAMVGF+FRNGR+ P+F+GIVVC+EFKDAIL                   AQA++RWY
Sbjct: 810  YAPAMVGFEFRNGRAAPIFDGIVVCSEFKDAILEAYAEEEERRVAEEKKRNEAQAISRWY 869

Query: 440  QLLSSIITRKRLNECYGDGALPQSSIEIPKSGDKCYNXXXXXXXXXXXXXSPECQQVNIP 261
            QLLSSIITR++L   YGDG+  Q+S  I    DK                S    + +  
Sbjct: 870  QLLSSIITRQKLKSYYGDGSSSQASRNIQ---DKNNEINAPDESSKDDRQSTGLWKGDGE 926

Query: 260  EKL-NAPSSMPTENHEHEFILDEKKVDEGGLTRIKRCHCGFSIQFEEL 120
            + L N PS    E+HEH F+ + +  D     R KRCHCGFSIQ EEL
Sbjct: 927  DTLCNIPSGTLVEDHEHVFLRENESFDAENSVRTKRCHCGFSIQVEEL 974