BLASTX nr result

ID: Rehmannia32_contig00009612 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00009612
         (399 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN03171.1| hypothetical protein CDL12_24310 [Handroanthus im...    59   2e-08
ref|XP_011080181.1| CLAVATA3/ESR (CLE)-related protein TDIF [Ses...    55   6e-07

>gb|PIN03171.1| hypothetical protein CDL12_24310 [Handroanthus impetiginosus]
          Length = 115

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 43/113 (38%), Positives = 49/113 (43%)
 Frame = +2

Query: 2   CMATTLKFNXXXXXXXXXXXXXXXHHXXXXXXXXXXXXXALVNXXXXXXXXXXXXXMASS 181
           CMATTLK N               H+             ALVN             MAS 
Sbjct: 12  CMATTLKLNSSFNLEFSSKP----HNLLLFFGLLFMILVALVNSSSSEDFSKPSSDMAS- 66

Query: 182 FVPSHDQTLFSSDASAEKMGINRRGSESKGKKDQRFEASDHEVPSGPNPISNK 340
            +PSH QT     A   +    +RG+     KD RF ASDHEVPSGPNPISN+
Sbjct: 67  VLPSHHQTT----AKTVEFHPRKRGNPRSKGKDPRFGASDHEVPSGPNPISNR 115


>ref|XP_011080181.1| CLAVATA3/ESR (CLE)-related protein TDIF [Sesamum indicum]
          Length = 147

 Score = 55.5 bits (132), Expect = 6e-07
 Identities = 34/69 (49%), Positives = 42/69 (60%), Gaps = 13/69 (18%)
 Frame = +2

Query: 173 ASSFVPSHDQTLFSSDASA--------EKMGINRRGSESKGKKD-----QRFEASDHEVP 313
           ASS +P H+ TLFS + +A         K   N   S+ KG KD     ++FEASDHEVP
Sbjct: 80  ASSALPPHE-TLFSGERAAAKTVDFQPRKKASNPHASKPKGYKDDDGDRRQFEASDHEVP 138

Query: 314 SGPNPISNK 340
           SGPNPISN+
Sbjct: 139 SGPNPISNR 147


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