BLASTX nr result

ID: Rehmannia32_contig00009142 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00009142
         (403 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011088833.1| pentatricopeptide repeat-containing protein ...   114   5e-27
gb|KZV31636.1| pentatricopeptide repeat-containing protein [Dorc...   113   2e-26
ref|XP_012847095.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   107   2e-24
emb|CDP20360.1| unnamed protein product [Coffea canephora]             95   5e-20
ref|XP_019263317.1| PREDICTED: pentatricopeptide repeat-containi...    87   4e-17
ref|XP_016496663.1| PREDICTED: pentatricopeptide repeat-containi...    87   4e-17
ref|XP_009604488.1| PREDICTED: pentatricopeptide repeat-containi...    87   4e-17
ref|XP_015085097.1| PREDICTED: pentatricopeptide repeat-containi...    87   4e-17
ref|XP_018627323.1| PREDICTED: pentatricopeptide repeat-containi...    87   4e-17
ref|XP_010325168.1| PREDICTED: pentatricopeptide repeat-containi...    87   4e-17
ref|XP_006356647.1| PREDICTED: pentatricopeptide repeat-containi...    85   2e-16
ref|XP_019263319.1| PREDICTED: pentatricopeptide repeat-containi...    84   4e-16
ref|XP_016496664.1| PREDICTED: pentatricopeptide repeat-containi...    84   4e-16
ref|XP_015085098.1| PREDICTED: pentatricopeptide repeat-containi...    84   4e-16
ref|XP_009604489.1| PREDICTED: pentatricopeptide repeat-containi...    84   4e-16
ref|XP_004245260.1| PREDICTED: pentatricopeptide repeat-containi...    84   4e-16
ref|XP_016449168.1| PREDICTED: pentatricopeptide repeat-containi...    84   4e-16
ref|XP_009785708.1| PREDICTED: pentatricopeptide repeat-containi...    84   4e-16
ref|XP_017230210.1| PREDICTED: pentatricopeptide repeat-containi...    82   2e-15
ref|XP_016449169.1| PREDICTED: pentatricopeptide repeat-containi...    81   3e-15

>ref|XP_011088833.1| pentatricopeptide repeat-containing protein At5g25630 [Sesamum
           indicum]
 ref|XP_020549790.1| pentatricopeptide repeat-containing protein At5g25630 [Sesamum
           indicum]
          Length = 625

 Score =  114 bits (286), Expect = 5e-27
 Identities = 58/92 (63%), Positives = 71/92 (77%)
 Frame = +2

Query: 128 MGYQEEFHKEMSNLEINSKNDSNLVLRDERAQELSIKEKSGDEKIQFYPMPESTLCTFCT 307
           MGY EEF K+ SN +I SK+ ++ ++ +ER      +E S  EKIQ YP+PESTLCTFC 
Sbjct: 1   MGYLEEFDKDSSNSKIKSKSQASTLVLNER------QETSHGEKIQVYPIPESTLCTFCM 54

Query: 308 SEESCKIVRSRTKLMNILLERGKPSEAQSVFN 403
           + ESCKIVRSRTKLMN+LLE+GKP EAQSVFN
Sbjct: 55  NGESCKIVRSRTKLMNVLLEKGKPQEAQSVFN 86


>gb|KZV31636.1| pentatricopeptide repeat-containing protein [Dorcoceras
           hygrometricum]
          Length = 607

 Score =  113 bits (282), Expect = 2e-26
 Identities = 55/93 (59%), Positives = 71/93 (76%), Gaps = 1/93 (1%)
 Frame = +2

Query: 128 MGYQEEFHKEMSNLEINSKNDSN-LVLRDERAQELSIKEKSGDEKIQFYPMPESTLCTFC 304
           MGY  +F KE  + ++   +  N L+L+ +  +E S KE++ DEKIQ YPMPESTLCTFC
Sbjct: 1   MGYLGDFDKESGDSDMTITSPGNTLILKGKWVEEFSNKERAHDEKIQLYPMPESTLCTFC 60

Query: 305 TSEESCKIVRSRTKLMNILLERGKPSEAQSVFN 403
            S ESCK+VRS+TK+MNILLE+GKP +AQSVFN
Sbjct: 61  MSGESCKVVRSQTKMMNILLEKGKPQDAQSVFN 93


>ref|XP_012847095.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g25630 [Erythranthe guttata]
          Length = 571

 Score =  107 bits (267), Expect = 2e-24
 Identities = 58/92 (63%), Positives = 65/92 (70%)
 Frame = +2

Query: 128 MGYQEEFHKEMSNLEINSKNDSNLVLRDERAQELSIKEKSGDEKIQFYPMPESTLCTFCT 307
           MGY EEF KE +N EIN KN           Q+  I ++S DEKI F P  ES LCTFCT
Sbjct: 1   MGYLEEFDKESANSEINCKN-----------QDDPIMKRSPDEKINFNPPSESPLCTFCT 49

Query: 308 SEESCKIVRSRTKLMNILLERGKPSEAQSVFN 403
           S+ESCKIVRSRTKLMNIL+E+GK  EAQSVFN
Sbjct: 50  SDESCKIVRSRTKLMNILVEKGKHQEAQSVFN 81


>emb|CDP20360.1| unnamed protein product [Coffea canephora]
          Length = 629

 Score = 95.1 bits (235), Expect = 5e-20
 Identities = 48/88 (54%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
 Frame = +2

Query: 143 EFHKEMSNLEINSKNDS-NLVLRDERAQELSIKEKSGDEKIQFYPMPESTLCTFCTSEES 319
           EF +E ++ +   +    + V++ E AQ+  I+EKS D  IQ +P+PESTLCTFC S   
Sbjct: 3   EFFEERTHSDTMKETQGCSKVIKKELAQQAPIEEKSIDNMIQLHPIPESTLCTFCMSGNI 62

Query: 320 CKIVRSRTKLMNILLERGKPSEAQSVFN 403
           C+ V+SRTKLMNILLERGKP EAQS+FN
Sbjct: 63  CRTVQSRTKLMNILLERGKPQEAQSIFN 90


>ref|XP_019263317.1| PREDICTED: pentatricopeptide repeat-containing protein At5g25630
           isoform X1 [Nicotiana attenuata]
 gb|OIT37243.1| pentatricopeptide repeat-containing protein [Nicotiana attenuata]
          Length = 640

 Score = 86.7 bits (213), Expect = 4e-17
 Identities = 43/91 (47%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
 Frame = +2

Query: 134 YQEEFHKEMSNLEI-NSKNDSNLVLRDERAQELSIKEKSGDEKIQFYPMPESTLCTFCTS 310
           Y ++F KE  N E    K+    ++R E      IKEK  D+K+   P PES LCTFC +
Sbjct: 11  YMDDFGKERQNCETYRKKSGMRTLIRKEWLHASPIKEKDPDDKMPLRPTPESGLCTFCVN 70

Query: 311 EESCKIVRSRTKLMNILLERGKPSEAQSVFN 403
             SC+ VRSRTKLMN +LERG+P EA+ +F+
Sbjct: 71  GNSCRTVRSRTKLMNTVLERGRPKEAELIFD 101


>ref|XP_016496663.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g25630-like isoform X1 [Nicotiana tabacum]
          Length = 640

 Score = 86.7 bits (213), Expect = 4e-17
 Identities = 43/91 (47%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
 Frame = +2

Query: 134 YQEEFHKEMSNLEI-NSKNDSNLVLRDERAQELSIKEKSGDEKIQFYPMPESTLCTFCTS 310
           Y ++F KE  N E  + K+    ++R E      IKEK  D+K+   P PES LCTFC +
Sbjct: 11  YMDDFGKEKRNCETYHKKSGMRTLIRKEWLHASPIKEKDLDDKMPLRPTPESVLCTFCVN 70

Query: 311 EESCKIVRSRTKLMNILLERGKPSEAQSVFN 403
             SC+ VRSRTKLMN +LERG+P EA+ +F+
Sbjct: 71  GNSCRTVRSRTKLMNTVLERGRPKEAELIFD 101


>ref|XP_009604488.1| PREDICTED: pentatricopeptide repeat-containing protein At5g25630
           isoform X2 [Nicotiana tomentosiformis]
          Length = 640

 Score = 86.7 bits (213), Expect = 4e-17
 Identities = 43/91 (47%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
 Frame = +2

Query: 134 YQEEFHKEMSNLEI-NSKNDSNLVLRDERAQELSIKEKSGDEKIQFYPMPESTLCTFCTS 310
           Y ++F KE  N E  + K+    ++R E      IKEK  D+K+   P PES LCTFC +
Sbjct: 11  YMDDFGKEKRNCETYHKKSGMRTLIRKEWLHTSPIKEKDLDDKMPLRPTPESVLCTFCVN 70

Query: 311 EESCKIVRSRTKLMNILLERGKPSEAQSVFN 403
             SC+ VRSRTKLMN +LERG+P EA+ +F+
Sbjct: 71  GNSCRTVRSRTKLMNTVLERGRPKEAELIFD 101


>ref|XP_015085097.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g25630-like isoform X1 [Solanum pennellii]
          Length = 647

 Score = 86.7 bits (213), Expect = 4e-17
 Identities = 44/92 (47%), Positives = 61/92 (66%), Gaps = 2/92 (2%)
 Frame = +2

Query: 134 YQEEFHKEMSNLEINSKNDSNL--VLRDERAQELSIKEKSGDEKIQFYPMPESTLCTFCT 307
           Y ++F KE SN E NS+  S +  ++R E     SIKEK  ++K+   P PES+LC FC 
Sbjct: 18  YMDDFRKERSNCE-NSRRKSGMKTLIRKEFLHPFSIKEKDLEDKMPLRPTPESSLCAFCV 76

Query: 308 SEESCKIVRSRTKLMNILLERGKPSEAQSVFN 403
           +  SC+ VR+RTKLMN +LERG+P EA+  F+
Sbjct: 77  NGNSCRTVRARTKLMNTVLERGRPEEARLTFD 108


>ref|XP_018627323.1| PREDICTED: pentatricopeptide repeat-containing protein At5g25630
           isoform X1 [Nicotiana tomentosiformis]
          Length = 650

 Score = 86.7 bits (213), Expect = 4e-17
 Identities = 43/91 (47%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
 Frame = +2

Query: 134 YQEEFHKEMSNLEI-NSKNDSNLVLRDERAQELSIKEKSGDEKIQFYPMPESTLCTFCTS 310
           Y ++F KE  N E  + K+    ++R E      IKEK  D+K+   P PES LCTFC +
Sbjct: 21  YMDDFGKEKRNCETYHKKSGMRTLIRKEWLHTSPIKEKDLDDKMPLRPTPESVLCTFCVN 80

Query: 311 EESCKIVRSRTKLMNILLERGKPSEAQSVFN 403
             SC+ VRSRTKLMN +LERG+P EA+ +F+
Sbjct: 81  GNSCRTVRSRTKLMNTVLERGRPKEAELIFD 111


>ref|XP_010325168.1| PREDICTED: pentatricopeptide repeat-containing protein At5g25630
           isoform X1 [Solanum lycopersicum]
          Length = 675

 Score = 86.7 bits (213), Expect = 4e-17
 Identities = 44/92 (47%), Positives = 61/92 (66%), Gaps = 2/92 (2%)
 Frame = +2

Query: 134 YQEEFHKEMSNLEINSKNDSNL--VLRDERAQELSIKEKSGDEKIQFYPMPESTLCTFCT 307
           Y ++F KE SN E NS+  S +  ++R E     SIKEK  ++K+   P PES+LC FC 
Sbjct: 46  YMDDFRKERSNCE-NSRRKSGMKTLIRKEFLHPFSIKEKDLEDKMPLRPTPESSLCAFCV 104

Query: 308 SEESCKIVRSRTKLMNILLERGKPSEAQSVFN 403
           +  SC+ VR+RTKLMN +LERG+P EA+  F+
Sbjct: 105 NGNSCRTVRARTKLMNTVLERGRPEEARLTFD 136


>ref|XP_006356647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g25630-like [Solanum tuberosum]
 ref|XP_006356648.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g25630-like [Solanum tuberosum]
          Length = 629

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 42/89 (47%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
 Frame = +2

Query: 140 EEFHKEMSNLEINS-KNDSNLVLRDERAQELSIKEKSGDEKIQFYPMPESTLCTFCTSEE 316
           ++F KE SN E +  K+    ++R E     SIKEK  D+K+   P PES+LC FC +  
Sbjct: 2   DDFRKERSNCEKSRRKSGMKTLIRKELLHPFSIKEKDLDDKMPLQPTPESSLCAFCVNGN 61

Query: 317 SCKIVRSRTKLMNILLERGKPSEAQSVFN 403
           SC+ VR+RTKLMN +LERG+P EA+  F+
Sbjct: 62  SCRTVRARTKLMNTVLERGRPEEARLTFD 90


>ref|XP_019263319.1| PREDICTED: pentatricopeptide repeat-containing protein At5g25630
           isoform X2 [Nicotiana attenuata]
          Length = 629

 Score = 84.0 bits (206), Expect = 4e-16
 Identities = 42/89 (47%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
 Frame = +2

Query: 140 EEFHKEMSNLEI-NSKNDSNLVLRDERAQELSIKEKSGDEKIQFYPMPESTLCTFCTSEE 316
           ++F KE  N E    K+    ++R E      IKEK  D+K+   P PES LCTFC +  
Sbjct: 2   DDFGKERQNCETYRKKSGMRTLIRKEWLHASPIKEKDPDDKMPLRPTPESGLCTFCVNGN 61

Query: 317 SCKIVRSRTKLMNILLERGKPSEAQSVFN 403
           SC+ VRSRTKLMN +LERG+P EA+ +F+
Sbjct: 62  SCRTVRSRTKLMNTVLERGRPKEAELIFD 90


>ref|XP_016496664.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g25630-like isoform X2 [Nicotiana tabacum]
          Length = 629

 Score = 84.0 bits (206), Expect = 4e-16
 Identities = 42/89 (47%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
 Frame = +2

Query: 140 EEFHKEMSNLEI-NSKNDSNLVLRDERAQELSIKEKSGDEKIQFYPMPESTLCTFCTSEE 316
           ++F KE  N E  + K+    ++R E      IKEK  D+K+   P PES LCTFC +  
Sbjct: 2   DDFGKEKRNCETYHKKSGMRTLIRKEWLHASPIKEKDLDDKMPLRPTPESVLCTFCVNGN 61

Query: 317 SCKIVRSRTKLMNILLERGKPSEAQSVFN 403
           SC+ VRSRTKLMN +LERG+P EA+ +F+
Sbjct: 62  SCRTVRSRTKLMNTVLERGRPKEAELIFD 90


>ref|XP_015085098.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g25630-like isoform X2 [Solanum pennellii]
          Length = 629

 Score = 84.0 bits (206), Expect = 4e-16
 Identities = 43/90 (47%), Positives = 60/90 (66%), Gaps = 2/90 (2%)
 Frame = +2

Query: 140 EEFHKEMSNLEINSKNDSNL--VLRDERAQELSIKEKSGDEKIQFYPMPESTLCTFCTSE 313
           ++F KE SN E NS+  S +  ++R E     SIKEK  ++K+   P PES+LC FC + 
Sbjct: 2   DDFRKERSNCE-NSRRKSGMKTLIRKEFLHPFSIKEKDLEDKMPLRPTPESSLCAFCVNG 60

Query: 314 ESCKIVRSRTKLMNILLERGKPSEAQSVFN 403
            SC+ VR+RTKLMN +LERG+P EA+  F+
Sbjct: 61  NSCRTVRARTKLMNTVLERGRPEEARLTFD 90


>ref|XP_009604489.1| PREDICTED: pentatricopeptide repeat-containing protein At5g25630
           isoform X3 [Nicotiana tomentosiformis]
          Length = 629

 Score = 84.0 bits (206), Expect = 4e-16
 Identities = 42/89 (47%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
 Frame = +2

Query: 140 EEFHKEMSNLEI-NSKNDSNLVLRDERAQELSIKEKSGDEKIQFYPMPESTLCTFCTSEE 316
           ++F KE  N E  + K+    ++R E      IKEK  D+K+   P PES LCTFC +  
Sbjct: 2   DDFGKEKRNCETYHKKSGMRTLIRKEWLHTSPIKEKDLDDKMPLRPTPESVLCTFCVNGN 61

Query: 317 SCKIVRSRTKLMNILLERGKPSEAQSVFN 403
           SC+ VRSRTKLMN +LERG+P EA+ +F+
Sbjct: 62  SCRTVRSRTKLMNTVLERGRPKEAELIFD 90


>ref|XP_004245260.1| PREDICTED: pentatricopeptide repeat-containing protein At5g25630
           isoform X2 [Solanum lycopersicum]
          Length = 629

 Score = 84.0 bits (206), Expect = 4e-16
 Identities = 43/90 (47%), Positives = 60/90 (66%), Gaps = 2/90 (2%)
 Frame = +2

Query: 140 EEFHKEMSNLEINSKNDSNL--VLRDERAQELSIKEKSGDEKIQFYPMPESTLCTFCTSE 313
           ++F KE SN E NS+  S +  ++R E     SIKEK  ++K+   P PES+LC FC + 
Sbjct: 2   DDFRKERSNCE-NSRRKSGMKTLIRKEFLHPFSIKEKDLEDKMPLRPTPESSLCAFCVNG 60

Query: 314 ESCKIVRSRTKLMNILLERGKPSEAQSVFN 403
            SC+ VR+RTKLMN +LERG+P EA+  F+
Sbjct: 61  NSCRTVRARTKLMNTVLERGRPEEARLTFD 90


>ref|XP_016449168.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g25630-like isoform X1 [Nicotiana tabacum]
          Length = 643

 Score = 84.0 bits (206), Expect = 4e-16
 Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
 Frame = +2

Query: 134 YQEEFHKEMSNLEI-NSKNDSNLVLRDERAQELSIKEKSGDEKIQFYPMPESTLCTFCTS 310
           Y ++F KE  N E    K+    ++R E      IKEK  D+K+   P PES  CTFC +
Sbjct: 14  YMDDFGKERQNCETYRKKSGMRTLIRKEWLHASPIKEKDPDDKMPLRPTPESGHCTFCVN 73

Query: 311 EESCKIVRSRTKLMNILLERGKPSEAQSVFN 403
             SC+ VRSRTKLMN +LERG+P EA+ +F+
Sbjct: 74  GNSCRTVRSRTKLMNTVLERGRPKEAELIFD 104


>ref|XP_009785708.1| PREDICTED: pentatricopeptide repeat-containing protein At5g25630
           isoform X1 [Nicotiana sylvestris]
          Length = 643

 Score = 84.0 bits (206), Expect = 4e-16
 Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
 Frame = +2

Query: 134 YQEEFHKEMSNLEI-NSKNDSNLVLRDERAQELSIKEKSGDEKIQFYPMPESTLCTFCTS 310
           Y ++F KE  N E    K+    ++R E      IKEK  D+K+   P PES  CTFC +
Sbjct: 14  YMDDFGKERQNCETYRKKSGMRTLIRKEWLHASPIKEKDPDDKMPLRPTPESGHCTFCVN 73

Query: 311 EESCKIVRSRTKLMNILLERGKPSEAQSVFN 403
             SC+ VRSRTKLMN +LERG+P EA+ +F+
Sbjct: 74  GNSCRTVRSRTKLMNTVLERGRPKEAELIFD 104


>ref|XP_017230210.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g25630-like [Daucus carota subsp. sativus]
 ref|XP_017230211.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g25630-like [Daucus carota subsp. sativus]
 gb|KZN11841.1| hypothetical protein DCAR_004497 [Daucus carota subsp. sativus]
          Length = 628

 Score = 82.0 bits (201), Expect = 2e-15
 Identities = 42/70 (60%), Positives = 49/70 (70%)
 Frame = +2

Query: 194 NLVLRDERAQELSIKEKSGDEKIQFYPMPESTLCTFCTSEESCKIVRSRTKLMNILLERG 373
           N V R+E  Q   IK K+ D  IQF P PES LCTFC  + SC+ VRS+TKLMNIL ERG
Sbjct: 21  NAVNRNELIQLSPIKRKNQDGWIQFSPHPESILCTFCLGKVSCRTVRSKTKLMNILTERG 80

Query: 374 KPSEAQSVFN 403
           KP EA S+F+
Sbjct: 81  KPEEALSIFD 90


>ref|XP_016449169.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g25630-like isoform X2 [Nicotiana tabacum]
 ref|XP_016449170.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g25630-like isoform X2 [Nicotiana tabacum]
 ref|XP_016449171.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g25630-like isoform X2 [Nicotiana tabacum]
 ref|XP_016449172.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g25630-like isoform X2 [Nicotiana tabacum]
          Length = 629

 Score = 81.3 bits (199), Expect = 3e-15
 Identities = 41/89 (46%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
 Frame = +2

Query: 140 EEFHKEMSNLEI-NSKNDSNLVLRDERAQELSIKEKSGDEKIQFYPMPESTLCTFCTSEE 316
           ++F KE  N E    K+    ++R E      IKEK  D+K+   P PES  CTFC +  
Sbjct: 2   DDFGKERQNCETYRKKSGMRTLIRKEWLHASPIKEKDPDDKMPLRPTPESGHCTFCVNGN 61

Query: 317 SCKIVRSRTKLMNILLERGKPSEAQSVFN 403
           SC+ VRSRTKLMN +LERG+P EA+ +F+
Sbjct: 62  SCRTVRSRTKLMNTVLERGRPKEAELIFD 90


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