BLASTX nr result
ID: Rehmannia32_contig00009134
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia32_contig00009134
(2514 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_006576520.1| movement protein [Amazon lily mild mottle vi... 519 e-176
ref|YP_009104376.1| putative movement protein [Cassava Ivorian b... 493 e-166
ref|YP_006576521.1| coat protein [Amazon lily mild mottle virus]... 283 9e-87
gb|AHG25373.3| movement protein [Pelargonium zonate spot virus] 284 2e-85
gb|AFU72535.1| putative movement protein [Pelargonium zonate spo... 284 2e-85
ref|YP_009104377.1| putative coat protein [Cassava Ivorian bacil... 279 5e-85
ref|NP_619772.1| putative movement protein [Pelargonium zonate s... 282 1e-84
gb|ACS72229.1| movement protein, partial [Pelargonium zonate spo... 266 1e-79
gb|ADE87484.1| movement protein, partial [Pelargonium zonate spo... 263 8e-79
gb|AFG73943.1| movement protein [Peanut stunt virus] 82 4e-13
ref|NP_049333.1| 3a protein [Peanut stunt virus] >gi|806736|gb|A... 82 4e-13
gb|AFG28426.1| movement protein [Peanut stunt virus] 81 8e-13
gb|ACF34996.1| 3a protein [Peanut stunt virus] 79 2e-12
emb|CAP19052.1| 3a protein [Peanut stunt virus] 79 4e-12
ref|YP_003208109.1| 3a protein [Melandrium yellow fleck virus] >... 79 5e-12
ref|NP_613276.1| movement protein [Cowpea chlorotic mottle virus... 78 1e-11
gb|AEI54610.1| movement protein [Cowpea chlorotic mottle virus] ... 78 1e-11
gb|AAM64086.1|AF428096_1 3a protein [Cowpea chlorotic mottle virus] 78 1e-11
gb|ADW09016.1| movement protein 3a [Brome mosaic virus] 78 1e-11
ref|YP_233103.1| 3a protein [Cassia yellow blotch virus] >gi|632... 77 1e-11
>ref|YP_006576520.1| movement protein [Amazon lily mild mottle virus]
dbj|BAM34545.1| movement protein [Amazon lily mild mottle virus]
Length = 296
Score = 519 bits (1337), Expect = e-176
Identities = 257/284 (90%), Positives = 271/284 (95%), Gaps = 1/284 (0%)
Frame = +2
Query: 377 LTRSFSSRPLTKLDGAVNEYLGSKEFEDDMRQQAGYGRWKGLKVGGGERSFVLVPENSHN 556
LTRS SSR LTKLD +VNEYLGSKEFE+DMRQQAGYGRWKGLKVGGGERSFVLVPENS+N
Sbjct: 5 LTRSSSSRSLTKLDNSVNEYLGSKEFEEDMRQQAGYGRWKGLKVGGGERSFVLVPENSYN 64
Query: 557 KLTGLFRADYDKGLVPSKGYMHLKWVMVFLVSHVPKSSAGSVTLSLKDPGWSLTDPLPDT 736
KL+GLF+ADYDKGLVPSKGYMHLKWVMVFLVSHVPKSSAGSVTL LKDPGWSLTDPLPDT
Sbjct: 65 KLSGLFKADYDKGLVPSKGYMHLKWVMVFLVSHVPKSSAGSVTLGLKDPGWSLTDPLPDT 124
Query: 737 SFEMALSSLPRVCLLTTDYDLPLSKKPIKLGDRGEMRRMFLLTAKVTGLVGAGDALSLFP 916
SFEM+LSSLPRVCLLTTDYDLPL KK IKLGDRGEMRRMFLL+AKVTGLVGAGDALSLFP
Sbjct: 125 SFEMSLSSLPRVCLLTTDYDLPLGKKTIKLGDRGEMRRMFLLSAKVTGLVGAGDALSLFP 184
Query: 917 IWDCDFRSSCNNYEVVPCTSVPITRCIRSDVLSCVAELNRYVKGTLLSLPRSSVSGARFA 1096
IWDCDFRSSCNNYEVVPCTSVPITRC+RSDVLSCVAELNRYVKGTLLSLPRSSVSG RFA
Sbjct: 185 IWDCDFRSSCNNYEVVPCTSVPITRCVRSDVLSCVAELNRYVKGTLLSLPRSSVSGTRFA 244
Query: 1097 APKLINQNESESDSSTAVVPESAGVRSAPPQ-GLAQSPALFNGV 1225
AP+LINQNE ++DSSTAVVPESAGV+ A PQ +Q+PALFNGV
Sbjct: 245 APELINQNEFDADSSTAVVPESAGVKLAAPQSSFSQAPALFNGV 288
>ref|YP_009104376.1| putative movement protein [Cassava Ivorian bacilliform virus]
gb|AHJ89007.1| putative movement protein [Cassava Ivorian bacilliform virus]
Length = 302
Score = 493 bits (1270), Expect = e-166
Identities = 249/303 (82%), Positives = 270/303 (89%), Gaps = 11/303 (3%)
Frame = +2
Query: 377 LTRSFSSRPLTKLDGAVNEYLGSKEFEDDMRQQAGYGRWKGLKVGGGERSFVLVPENSHN 556
LTRSFSSR L KLD +VNEYLGSKEFE+DMRQQAGYGRWKGLKVGGGERSFVLVPENS++
Sbjct: 3 LTRSFSSRSLAKLDNSVNEYLGSKEFEEDMRQQAGYGRWKGLKVGGGERSFVLVPENSYS 62
Query: 557 KLTGLFRADYDKGLVPSKGYMHLKWVMVFLVSHVPKSSAGSVTLSLKDPGWSLTDPLPDT 736
KL+ LF+ADY+KGL+PSKGYMHLKWVMVFLVSHVPKSSAGSVTL+LKDPGWSLTDPLPDT
Sbjct: 63 KLSSLFKADYEKGLIPSKGYMHLKWVMVFLVSHVPKSSAGSVTLALKDPGWSLTDPLPDT 122
Query: 737 SFEMALSSLPRVCLLTTDYDLPLSKKPIKLGDRGEMRRMFLLTAKVTGLVGAGDALSLFP 916
SFEM+LS LPRVCLLTTDYDLPL KK IKLGDRGEMRRMFLL+AKV+GLVGAGDALSLFP
Sbjct: 123 SFEMSLSQLPRVCLLTTDYDLPLGKKTIKLGDRGEMRRMFLLSAKVSGLVGAGDALSLFP 182
Query: 917 IWDCDFRSSCNNYEVVPCTSVPITRCIRSDVLSCVAELNRYVKGTLLSLPRSSVSGARFA 1096
IWDCDFRSSCNNYEVVPCTSVPI+RCIRSDVLSCVAELNRYVKGTLLSLPRSSVSG RFA
Sbjct: 183 IWDCDFRSSCNNYEVVPCTSVPISRCIRSDVLSCVAELNRYVKGTLLSLPRSSVSGTRFA 242
Query: 1097 APKLINQNESESDSSTAVVPESAG-------VRSAPPQ----GLAQSPALFNGVEDVSKE 1243
AP+LINQNESE DS+ AV ESAG V++ P + PALFNGVE+ +
Sbjct: 243 APELINQNESEPDSNAAVASESAGVVVPGSAVQTTDPTLSGGSVEVRPALFNGVEE---K 299
Query: 1244 VIP 1252
V+P
Sbjct: 300 VVP 302
>ref|YP_006576521.1| coat protein [Amazon lily mild mottle virus]
dbj|BAM34546.1| coat protein [Amazon lily mild mottle virus]
Length = 204
Score = 283 bits (725), Expect = 9e-87
Identities = 138/159 (86%), Positives = 148/159 (93%)
Frame = +3
Query: 1641 GPVTSGMVDAGGIPVTPGFVVTSVTLNEPFQWAGAGTGAWTLFRERSLVIPPALPPETRL 1820
GP TS +VDAGGIPVTPGFVVTSVTL+E FQW+G GTGAWTLFRERSLVIP ALPPETRL
Sbjct: 38 GPSTSALVDAGGIPVTPGFVVTSVTLSEAFQWSGPGTGAWTLFRERSLVIPSALPPETRL 97
Query: 1821 NHVILRVTPTPGLSSFDIWAAIAAAKGSLPTAADFDALNVPFLTMNGTSRTRHVVIPFAN 2000
N+VILRVTPTPGL+SFDIW A+AAAKGS PTA DFDALNVPFLTM TSRTRHVV+PF N
Sbjct: 98 NNVILRVTPTPGLASFDIWVAVAAAKGSTPTAVDFDALNVPFLTMRETSRTRHVVVPFVN 157
Query: 2001 RTVADLSQQRVWLGARTGTVTADNLVVGLVRVFIEHRPI 2117
RTVADL+QQRVWLGARTGTVTA++LVVGLVRVFIEHRPI
Sbjct: 158 RTVADLAQQRVWLGARTGTVTAESLVVGLVRVFIEHRPI 196
>gb|AHG25373.3| movement protein [Pelargonium zonate spot virus]
Length = 309
Score = 284 bits (726), Expect = 2e-85
Identities = 135/269 (50%), Positives = 186/269 (69%)
Frame = +2
Query: 368 MSILTRSFSSRPLTKLDGAVNEYLGSKEFEDDMRQQAGYGRWKGLKVGGGERSFVLVPEN 547
MS++ RS +S L LD ++ YLGS+EF++DMR+QAG+GRWKG+K GE+ VLVP+N
Sbjct: 1 MSLIRRS-TSHQLNALDNSLQSYLGSQEFKEDMREQAGFGRWKGVKASAGEKPIVLVPDN 59
Query: 548 SHNKLTGLFRADYDKGLVPSKGYMHLKWVMVFLVSHVPKSSAGSVTLSLKDPGWSLTDPL 727
S++ L L +++Y+KGL+PSKGYMHLKW ++F+V+HVPK + G V + L+DPG S DPL
Sbjct: 60 SYSALKALMKSEYEKGLIPSKGYMHLKWCLIFIVAHVPKETMGEVCVELRDPGISTADPL 119
Query: 728 PDTSFEMALSSLPRVCLLTTDYDLPLSKKPIKLGDRGEMRRMFLLTAKVTGLVGAGDALS 907
P ALS LPR +L DYD+PL K ++LG++ EMRRMF L KV+G G G A+S
Sbjct: 120 PGCQVVCALSDLPRAVMLVPDYDMPLGKSKLRLGNQ-EMRRMFFLHTKVSGFTGQGVAIS 178
Query: 908 LFPIWDCDFRSSCNNYEVVPCTSVPITRCIRSDVLSCVAELNRYVKGTLLSLPRSSVSGA 1087
LFP+WDCDFR +CNNY VP SV I R R+ +L+CV +L +Y + LL++P+S G
Sbjct: 179 LFPVWDCDFRGTCNNYVKVPAVSVGIDRTERTSLLNCVKQLKQYAENALLTMPQSISGGT 238
Query: 1088 RFAAPKLINQNESESDSSTAVVPESAGVR 1174
FA P ++ NES++ ST+ R
Sbjct: 239 SFARPSHLSFNESKTLPSTSTTEAEGSER 267
>gb|AFU72535.1| putative movement protein [Pelargonium zonate spot virus]
Length = 309
Score = 284 bits (726), Expect = 2e-85
Identities = 135/269 (50%), Positives = 186/269 (69%)
Frame = +2
Query: 368 MSILTRSFSSRPLTKLDGAVNEYLGSKEFEDDMRQQAGYGRWKGLKVGGGERSFVLVPEN 547
MS++ RS +S L LD ++ YLGS+EF++DMR+QAG+GRWKG+K GE+ VLVP+N
Sbjct: 1 MSLIRRS-TSHQLNALDNSLQSYLGSQEFKEDMREQAGFGRWKGVKASAGEKPIVLVPDN 59
Query: 548 SHNKLTGLFRADYDKGLVPSKGYMHLKWVMVFLVSHVPKSSAGSVTLSLKDPGWSLTDPL 727
S++ L L +++Y+KGL+PSKGYMHLKW ++F+V+HVPK + G V + L+DPG S DPL
Sbjct: 60 SYSALKALMKSEYEKGLIPSKGYMHLKWCLIFIVAHVPKETMGEVCVELRDPGISTADPL 119
Query: 728 PDTSFEMALSSLPRVCLLTTDYDLPLSKKPIKLGDRGEMRRMFLLTAKVTGLVGAGDALS 907
P ALS LPR +L DYD+PL K ++LG++ EMRRMF L KV+G G G A+S
Sbjct: 120 PGCQVVCALSDLPRAVMLVPDYDMPLGKSKLRLGNQ-EMRRMFFLHTKVSGFTGQGVAIS 178
Query: 908 LFPIWDCDFRSSCNNYEVVPCTSVPITRCIRSDVLSCVAELNRYVKGTLLSLPRSSVSGA 1087
LFP+WDCDFR +CNNY VP SV I R R+ +L+CV +L +Y + LL++P+S G
Sbjct: 179 LFPVWDCDFRGTCNNYVKVPAVSVGIDRTERTSLLNCVKQLKQYAENALLTMPQSISGGT 238
Query: 1088 RFAAPKLINQNESESDSSTAVVPESAGVR 1174
FA P ++ NES++ ST+ R
Sbjct: 239 SFARPSHLSFNESKTLPSTSTTEAEGSER 267
>ref|YP_009104377.1| putative coat protein [Cassava Ivorian bacilliform virus]
gb|AHJ89008.1| putative coat protein [Cassava Ivorian bacilliform virus]
Length = 205
Score = 279 bits (713), Expect = 5e-85
Identities = 134/159 (84%), Positives = 145/159 (91%)
Frame = +3
Query: 1641 GPVTSGMVDAGGIPVTPGFVVTSVTLNEPFQWAGAGTGAWTLFRERSLVIPPALPPETRL 1820
GP TSG+VD GGIPVTPGFV+TSVTL+E F W G GTG WTLFRERSLVIPP LPPETRL
Sbjct: 39 GPSTSGVVDVGGIPVTPGFVLTSVTLSESFSWTGPGTGTWTLFRERSLVIPPTLPPETRL 98
Query: 1821 NHVILRVTPTPGLSSFDIWAAIAAAKGSLPTAADFDALNVPFLTMNGTSRTRHVVIPFAN 2000
N+VILRVTPTPG++S+DIWAA+AAAKGS PTA DFD+LNVPFLTM TSR RHVVIPFA
Sbjct: 99 NNVILRVTPTPGMTSYDIWAAVAAAKGSTPTAVDFDSLNVPFLTMRETSRNRHVVIPFAG 158
Query: 2001 RTVADLSQQRVWLGARTGTVTADNLVVGLVRVFIEHRPI 2117
RTVADL+QQRVWLGARTGTVTADNLVVGLVR+FIEHRPI
Sbjct: 159 RTVADLAQQRVWLGARTGTVTADNLVVGLVRLFIEHRPI 197
>ref|NP_619772.1| putative movement protein [Pelargonium zonate spot virus]
sp|Q9DUT1.1|MVP_PZSVT RecName: Full=Movement protein; Short=MP; AltName: Full=Protein 3A
emb|CAC08528.1| putative movement protein [Pelargonium zonate spot virus]
Length = 309
Score = 282 bits (721), Expect = 1e-84
Identities = 135/269 (50%), Positives = 185/269 (68%)
Frame = +2
Query: 368 MSILTRSFSSRPLTKLDGAVNEYLGSKEFEDDMRQQAGYGRWKGLKVGGGERSFVLVPEN 547
MS++ RS +S L LD ++ YLGS+EF++DMR+QAG+GRWK +K GE+ VLVP+N
Sbjct: 1 MSLIRRS-TSHQLNALDNSLQSYLGSQEFKEDMREQAGFGRWKRVKASAGEKPIVLVPDN 59
Query: 548 SHNKLTGLFRADYDKGLVPSKGYMHLKWVMVFLVSHVPKSSAGSVTLSLKDPGWSLTDPL 727
S++ L L +++Y+KGL+PSKGYMHLKW +VF+V+HVPK + G V + L+DPG S DPL
Sbjct: 60 SYSALKALMKSEYEKGLIPSKGYMHLKWCLVFIVAHVPKETMGEVCIELRDPGISTADPL 119
Query: 728 PDTSFEMALSSLPRVCLLTTDYDLPLSKKPIKLGDRGEMRRMFLLTAKVTGLVGAGDALS 907
P ALS LPR +L DYD+PL K ++LG++ EMRRMF L KV+G G G A+S
Sbjct: 120 PGCQVVCALSDLPRAVMLVPDYDMPLGKSKLRLGNQ-EMRRMFFLHTKVSGFTGQGVAIS 178
Query: 908 LFPIWDCDFRSSCNNYEVVPCTSVPITRCIRSDVLSCVAELNRYVKGTLLSLPRSSVSGA 1087
LFP+WDCDFR +CNNY VP SV I R R+ +L+CV +L +Y + LL++P+S G
Sbjct: 179 LFPVWDCDFRGTCNNYVKVPAVSVGIDRTERTSLLNCVKQLKQYAENALLTMPQSISGGT 238
Query: 1088 RFAAPKLINQNESESDSSTAVVPESAGVR 1174
FA P ++ NES++ ST+ R
Sbjct: 239 SFARPSHLSLNESKTLPSTSTTEAEGSER 267
>gb|ACS72229.1| movement protein, partial [Pelargonium zonate spot virus]
gb|ACS72230.1| movement protein, partial [Pelargonium zonate spot virus]
Length = 231
Score = 266 bits (679), Expect = 1e-79
Identities = 122/227 (53%), Positives = 163/227 (71%)
Frame = +2
Query: 422 AVNEYLGSKEFEDDMRQQAGYGRWKGLKVGGGERSFVLVPENSHNKLTGLFRADYDKGLV 601
++ YLGS+EF++DMR+QAG+GRWKG+K GE+ VLVP+NS++ L L +++Y+KGL+
Sbjct: 1 SLQSYLGSQEFKEDMREQAGFGRWKGVKASAGEKPIVLVPDNSYSALKALMKSEYEKGLI 60
Query: 602 PSKGYMHLKWVMVFLVSHVPKSSAGSVTLSLKDPGWSLTDPLPDTSFEMALSSLPRVCLL 781
PSKGYMHLKW +VF+V+HVPK + G V + L+DPG S DPLP ALS LPR +L
Sbjct: 61 PSKGYMHLKWCLVFIVAHVPKETMGEVCVELRDPGISTADPLPGCQVVCALSDLPRAVML 120
Query: 782 TTDYDLPLSKKPIKLGDRGEMRRMFLLTAKVTGLVGAGDALSLFPIWDCDFRSSCNNYEV 961
DYD+PL K ++LG++ EMRRMF L KV+G G G A+SLFP+WDCDFR +CNNY
Sbjct: 121 VPDYDMPLGKSKLRLGNQ-EMRRMFFLHTKVSGFTGQGVAISLFPVWDCDFRGTCNNYVK 179
Query: 962 VPCTSVPITRCIRSDVLSCVAELNRYVKGTLLSLPRSSVSGARFAAP 1102
VP SV I R R+ +L+CV +L Y + LL++P+S G FA P
Sbjct: 180 VPAVSVGIDRTERTSLLNCVKQLKHYAENALLTMPQSISGGTSFAHP 226
>gb|ADE87484.1| movement protein, partial [Pelargonium zonate spot virus]
Length = 229
Score = 263 bits (673), Expect = 8e-79
Identities = 121/230 (52%), Positives = 165/230 (71%)
Frame = +2
Query: 443 SKEFEDDMRQQAGYGRWKGLKVGGGERSFVLVPENSHNKLTGLFRADYDKGLVPSKGYMH 622
S+EF+ DMR+QAG+GRWKG+K GE+ VLVP+NS++ L L +++Y+KGL+PSKGYMH
Sbjct: 1 SQEFKKDMREQAGFGRWKGVKASAGEKPIVLVPDNSYSALKALMKSEYEKGLIPSKGYMH 60
Query: 623 LKWVMVFLVSHVPKSSAGSVTLSLKDPGWSLTDPLPDTSFEMALSSLPRVCLLTTDYDLP 802
LKW ++F+V+HVPK + G V + L+DPG S DPLP ALS LPR +L DYD+P
Sbjct: 61 LKWCLIFIVAHVPKETMGEVCVELRDPGISTADPLPGCQVVCALSDLPRAVMLVPDYDMP 120
Query: 803 LSKKPIKLGDRGEMRRMFLLTAKVTGLVGAGDALSLFPIWDCDFRSSCNNYEVVPCTSVP 982
L K ++LG++ EMRRMF L KV+G G G A+SLFP+WDCDFR +CNNY VP SV
Sbjct: 121 LGKSKLRLGNQ-EMRRMFFLHTKVSGFTGQGVAISLFPVWDCDFRGTCNNYVKVPAVSVG 179
Query: 983 ITRCIRSDVLSCVAELNRYVKGTLLSLPRSSVSGARFAAPKLINQNESES 1132
I R R+ +L+CV +L +Y + LL++P+S G FA P ++ NES++
Sbjct: 180 IDRIERTSLLNCVKQLKQYAENALLTMPQSISGGTSFARPSHLSLNESKT 229
>gb|AFG73943.1| movement protein [Peanut stunt virus]
Length = 289
Score = 81.6 bits (200), Expect = 4e-13
Identities = 77/288 (26%), Positives = 120/288 (41%), Gaps = 8/288 (2%)
Frame = +2
Query: 386 SFSSRPLTKLDGA-----VNEYLGSKEFEDDMRQQAGYGRWKGLKVGGGERSFVLVPENS 550
S SSR LT+ A ++ L S E +M + GR ++ LVPE++
Sbjct: 4 SGSSRTLTQQSSAATSDDLHRILFSPEAIKEMATKCDLGRHHWMRADDAICVRPLVPEST 63
Query: 551 HNKLTGLFRADYDKGLVPSKGYMHLKWVMVFLVSHVPKSSAGSVTLSLKDPGWSLTDPLP 730
NK+T F++ Y+ G +PSKGYM + V+ + V S+ GS+ + L D G P+
Sbjct: 64 SNKVTQWFKSGYEAGKLPSKGYMSVPQVLCAVTRTVTASAEGSLEIYLADSGDEELAPID 123
Query: 731 DTSFEMALSSLPRVCLLTTDYDLPLSKKPIKLGDRGEMRRMFLLTAKVTGLVG-AGDALS 907
+ LP + YD P+ GE R F + K G +G G S
Sbjct: 124 GQIVTLHNRDLPALVSFQPTYDCPMESV-------GERSRCFAVVIKRYGYIGHPGSTAS 176
Query: 908 LFPIWDCDFRSSCNNYEVVPCTSVPITRCIRSDVLSCVAELNRYVKGTL--LSLPRSSVS 1081
+ W F S NNY+ + I R LS + + R +K L S P +
Sbjct: 177 ICSNWQPRFSSKNNNYKPITAGKTLILPYNRLSELSGPSAVVRLLKSQLNMQSSPLFQLP 236
Query: 1082 GARFAAPKLINQNESESDSSTAVVPESAGVRSAPPQGLAQSPALFNGV 1225
G+ + +++E + E V +AP L P++ NG+
Sbjct: 237 GSPIMQKAIGSEHEEGLNCKRKQPLEE--VCTAPQDSLGSRPSVVNGI 282
>ref|NP_049333.1| 3a protein [Peanut stunt virus]
gb|AAA70086.1| 3a protein [Peanut stunt virus]
Length = 289
Score = 81.6 bits (200), Expect = 4e-13
Identities = 77/289 (26%), Positives = 122/289 (42%), Gaps = 8/289 (2%)
Frame = +2
Query: 386 SFSSRPLTKLDGA-----VNEYLGSKEFEDDMRQQAGYGRWKGLKVGGGERSFVLVPENS 550
S SSR LT+ A +++ L S + +M ++ GR ++ LVPE++
Sbjct: 4 SGSSRTLTQQSSAASSDDLHKILFSPDAIKEMATKSDLGRHHCVRADDAVCVRPLVPEST 63
Query: 551 HNKLTGLFRADYDKGLVPSKGYMHLKWVMVFLVSHVPKSSAGSVTLSLKDPGWSLTDPLP 730
NK+ F+ Y+ G +PSKGYM + V+ + V S+ GS+ + L D G P+
Sbjct: 64 SNKVAQWFKTGYEAGKLPSKGYMIIPQVLCAVTRTVTSSAEGSLEIYLADTGDVELAPID 123
Query: 731 DTSFEMALSSLPRVCLLTTDYDLPLSKKPIKLGDRGEMRRMFLLTAKVTGLVG-AGDALS 907
D + LP + YD P+ K+GDR R F + K G +G G S
Sbjct: 124 DQVVTLHNRDLPALISFQPTYDCPME----KVGDRS---RCFAVVIKRHGYLGHPGSTAS 176
Query: 908 LFPIWDCDFRSSCNNYEVVPCTSVPITRCIRSDVLSCVAELNRYVKGTL--LSLPRSSVS 1081
+ W F S NNY+ + R LS + + R +K L LP +
Sbjct: 177 VCSNWQPKFSSKNNNYKSAAAGKTLVLPYNRLSELSGPSAVARLLKSQLNVQRLPLFQLP 236
Query: 1082 GARFAAPKLINQNESESDSSTAVVPESAGVRSAPPQGLAQSPALFNGVE 1228
G+ + +E E + P R+ P + P++ NG+E
Sbjct: 237 GSPIMQKAI--GSEHEEGLNCKRKPPLEEDRTTPQDSVGSRPSVVNGIE 283
>gb|AFG28426.1| movement protein [Peanut stunt virus]
Length = 289
Score = 80.9 bits (198), Expect = 8e-13
Identities = 77/288 (26%), Positives = 120/288 (41%), Gaps = 8/288 (2%)
Frame = +2
Query: 386 SFSSRPLTKLDGA-----VNEYLGSKEFEDDMRQQAGYGRWKGLKVGGGERSFVLVPENS 550
S SSR LT+ A ++ L S E +M + GR ++ LVPE++
Sbjct: 4 SGSSRTLTQQSSAATSDDLHRILFSPEAIKEMATKCDLGRHHWMRADDAICVRPLVPEST 63
Query: 551 HNKLTGLFRADYDKGLVPSKGYMHLKWVMVFLVSHVPKSSAGSVTLSLKDPGWSLTDPLP 730
NK+T F++ Y+ G +PSKGYM + V+ + V S+ GS+ + L D G P+
Sbjct: 64 SNKVTQWFKSGYEAGKLPSKGYMSVPQVLCAVTRTVTASAEGSLEIYLADSGDEELAPID 123
Query: 731 DTSFEMALSSLPRVCLLTTDYDLPLSKKPIKLGDRGEMRRMFLLTAKVTGLVG-AGDALS 907
+ LP + YD P+ GE R F + K G +G G S
Sbjct: 124 GQIVTLHNRDLPALVSFQPTYDCPMELV-------GERSRCFAVVIKRYGYIGHPGSTAS 176
Query: 908 LFPIWDCDFRSSCNNYEVVPCTSVPITRCIRSDVLSCVAELNRYVKGTL--LSLPRSSVS 1081
+ W F S NNY+ + I R LS + + R +K L S P +
Sbjct: 177 ICSNWQPRFSSKNNNYKPITAGKTLILPYNRLSELSGPSAVVRLLKSQLNMQSSPLFQLP 236
Query: 1082 GARFAAPKLINQNESESDSSTAVVPESAGVRSAPPQGLAQSPALFNGV 1225
G+ + +++E + E V +AP L P++ NG+
Sbjct: 237 GSPIMQKAIGSEHEEGLNCKRKQPLEE--VCTAPQDSLGSRPSVVNGI 282
>gb|ACF34996.1| 3a protein [Peanut stunt virus]
Length = 289
Score = 79.3 bits (194), Expect = 2e-12
Identities = 75/289 (25%), Positives = 117/289 (40%), Gaps = 8/289 (2%)
Frame = +2
Query: 386 SFSSRPLTKLDGA-----VNEYLGSKEFEDDMRQQAGYGRWKGLKVGGGERSFVLVPENS 550
S SSR LT+ ++ L S E +M + GR ++ LVPE +
Sbjct: 4 SGSSRTLTQQSSVASSDDLHRILFSPEAIKEMATKCDLGRHHWMRADDAICVRPLVPEAT 63
Query: 551 HNKLTGLFRADYDKGLVPSKGYMHLKWVMVFLVSHVPKSSAGSVTLSLKDPGWSLTDPLP 730
NK+T F++ Y+ G +PSKGYM + V+ + V S+ GS+ + L D G P+
Sbjct: 64 SNKVTQWFKSGYEAGKLPSKGYMSVPQVLCAVTRTVTSSAEGSLEIYLADSGDEELAPID 123
Query: 731 DTSFEMALSSLPRVCLLTTDYDLPLSKKPIKLGDRGEMRRMFLLTAKVTGLVG-AGDALS 907
+ LP + YD P+ G R F++ K G +G G S
Sbjct: 124 GQMVTLHNRDLPALVSFQPTYDCPMESV-------GGRSRCFVVVTKRYGYLGHPGSTAS 176
Query: 908 LFPIWDCDFRSSCNNYEVVPCTSVPITRCIRSDVLSCVAELNRYVKGTL--LSLPRSSVS 1081
+ W F NNY+ + + R LS + + R +K L S P +
Sbjct: 177 VCSNWQPKFSPKNNNYKSIAAGKTLVLPYNRLSELSGPSAVVRLLKSQLNMQSSPLFQLP 236
Query: 1082 GARFAAPKLINQNESESDSSTAVVPESAGVRSAPPQGLAQSPALFNGVE 1228
G+ A + +E E + P V + P L P++ NG+E
Sbjct: 237 GSPIAQKAI--GSECEEGLNCKRKPPLEEVSATPQNSLGSRPSVVNGIE 283
>emb|CAP19052.1| 3a protein [Peanut stunt virus]
Length = 289
Score = 78.6 bits (192), Expect = 4e-12
Identities = 72/288 (25%), Positives = 124/288 (43%), Gaps = 7/288 (2%)
Frame = +2
Query: 386 SFSSRPLTKLDGA-----VNEYLGSKEFEDDMRQQAGYGRWKGLKVGGGERSFVLVPENS 550
S SSR LT+ A +++ L S E +M + GR ++ LVPE++
Sbjct: 4 SGSSRTLTQQSSAASSDDLHKILFSPEAIKEMATKCDLGRHHWMRADNAVCVRPLVPEST 63
Query: 551 HNKLTGLFRADYDKGLVPSKGYMHLKWVMVFLVSHVPKSSAGSVTLSLKDPGWSLTDPLP 730
NK+T F++ Y+ G +PSKGYM + V+ + V ++ GS+ + L D G P+
Sbjct: 64 SNKVTRWFKSGYEAGDLPSKGYMSVPQVLCAITRTVMANAEGSIRIYLADLGDDELAPID 123
Query: 731 DTSFEMALSSLPRVCLLTTDYDLPLSKKPIKLGDRGEMRRMFLLTAKVTGLVGAGDALSL 910
D + LP + YD P+ +G+ R ++T + + +G S+
Sbjct: 124 DQVVTLHNRDLPALVSFQPTYDCPMEIV------KGKSRCFVVVTERYGYIGHSGSTASV 177
Query: 911 FPIWDCDFRSSCNNYEVVPCTSVPITRCIRSDVLSCVAELNRYVKGTL--LSLPRSSVSG 1084
W F S NNY + R LS + + R +K L S P + G
Sbjct: 178 CSSWQPKFSSKNNNYRPAAAGKTLVLPYNRLSELSGPSAVARLLKSQLNMQSSPFFQLPG 237
Query: 1085 ARFAAPKLINQNESESDSSTAVVPESAGVRSAPPQGLAQSPALFNGVE 1228
+ + +++E + + + E V + P ++ P++ NGVE
Sbjct: 238 SPVIQKAIGSEHEEGLNCNRKLPLEE--VSTTPQDMVSSKPSVVNGVE 283
>ref|YP_003208109.1| 3a protein [Melandrium yellow fleck virus]
dbj|BAI40163.1| 3a protein [Melandrium yellow fleck virus]
Length = 295
Score = 78.6 bits (192), Expect = 5e-12
Identities = 66/238 (27%), Positives = 107/238 (44%), Gaps = 12/238 (5%)
Frame = +2
Query: 368 MSILTRSFSSRPLT---KLDGAVNEYLGSKEFED----DMRQQAGYGRWKGLKVGGGERS 526
MS L + F+ R T ++ + N L S+ F + +M + G + L
Sbjct: 1 MSNLVKPFTGRSSTVTEQVGSSNNNTLISEIFSEKAIKEMASECKLGMYTNLSSDKMFNY 60
Query: 527 FVLVPENSHNKLTGLFRADYDKGLVPSKGYMHLKWVMVFLVSHVPKSSAGSVTLSLKDPG 706
LVP+ +KL +++Y++G VPS G + + V++F+V V S +GS+T+ L D G
Sbjct: 61 IDLVPKTQMSKLISWTKSEYEQGKVPSTGVLSIPRVLLFIVRTVSSSVSGSITVRLCDSG 120
Query: 707 WSLT----DPLPDTSFEMALSSLPRVCLLTTDYDLPLSKKPIKLGDRGEMRRMFLLTAKV 874
T D + + + LS+LP + L+ YD P+ LG R F L ++
Sbjct: 121 VIATSGGLDSIDNQECTVQLSALPALIALSPSYDCPME----VLGGNKGRNRCFGLVTQL 176
Query: 875 TGLVG-AGDALSLFPIWDCDFRSSCNNYEVVPCTSVPITRCIRSDVLSCVAELNRYVK 1045
G+VG G W+ F+ NNY+ V +T R EL +Y+K
Sbjct: 177 NGVVGVTGTVAMTHAYWNASFKVKPNNYKSYSPRHVSVTAFDRLQAYG-KKELKQYIK 233
>ref|NP_613276.1| movement protein [Cowpea chlorotic mottle virus]
sp|P20180.1|MVP_CCMV RecName: Full=Movement protein; Short=MP; AltName: Full=Protein 3A
gb|AAA46372.1| 3a protein [Cowpea chlorotic mottle virus]
gb|AAN37633.1| 3a protein [Cowpea chlorotic mottle virus]
gb|AAN37637.1| 3a protein [Cowpea chlorotic mottle virus]
Length = 302
Score = 77.8 bits (190), Expect = 1e-11
Identities = 51/187 (27%), Positives = 94/187 (50%), Gaps = 6/187 (3%)
Frame = +2
Query: 416 DGAVNEYLGSKEFEDDMRQQAGYGRWKGLKVGGGERSFVLVPENSHNKLTGLFRADYDKG 595
D ++ + L S + ++ ++ G + L LVP+N+ ++ LF+++Y+KG
Sbjct: 27 DMSLLQSLFSDKSREEFAKECKLGMYTNLSSNNRLNYIDLVPKNTGSRALNLFKSEYEKG 86
Query: 596 LVPSKGYMHLKWVMVFLVSHVPKSSAGSVTLSLKD----PGWSLTDPLPDT-SFEMALSS 760
+PS G + + V+VFLV + +GSVT+ L D + +P+ T + +SS
Sbjct: 87 HIPSSGVLSIPRVLVFLVRTTTVTESGSVTIRLVDLISASSVEILEPVDGTQEATIPISS 146
Query: 761 LPRVCLLTTDYDLPLSKKPIKLGDRGEMRRMFLLTAKVTGLVGAGDALSL-FPIWDCDFR 937
LP + + YD P+ +G+R R F L ++ G++ +G + + W +FR
Sbjct: 147 LPAIVCFSPSYDCPMQ----MIGNR---HRCFGLVTQLDGVISSGSTVVMSHAYWSANFR 199
Query: 938 SSCNNYE 958
S NNY+
Sbjct: 200 SKPNNYK 206
>gb|AEI54610.1| movement protein [Cowpea chlorotic mottle virus]
gb|AEI54614.1| movement protein [Cowpea chlorotic mottle virus]
Length = 302
Score = 77.8 bits (190), Expect = 1e-11
Identities = 51/187 (27%), Positives = 94/187 (50%), Gaps = 6/187 (3%)
Frame = +2
Query: 416 DGAVNEYLGSKEFEDDMRQQAGYGRWKGLKVGGGERSFVLVPENSHNKLTGLFRADYDKG 595
D ++ + L S + ++ ++ G + L LVP+N+ ++ LF+++Y+KG
Sbjct: 27 DMSLLQSLFSDKSREEFAKECKLGMYTNLSSNNRLNYIDLVPKNTGSRALNLFKSEYEKG 86
Query: 596 LVPSKGYMHLKWVMVFLVSHVPKSSAGSVTLSLKD----PGWSLTDPLPDT-SFEMALSS 760
+PS G + + V+VFLV + +GSVT+ L D + +P+ T + +SS
Sbjct: 87 HIPSSGVLSIPRVLVFLVRTTTVTESGSVTIRLVDLISASSVEILEPVDGTQEATIPISS 146
Query: 761 LPRVCLLTTDYDLPLSKKPIKLGDRGEMRRMFLLTAKVTGLVGAGDALSL-FPIWDCDFR 937
LP + + YD P+ +G+R R F L ++ G++ +G + + W +FR
Sbjct: 147 LPAIVCFSPSYDCPMQ----MIGNR---HRCFGLVTQLDGVISSGSTVVMSHAYWSANFR 199
Query: 938 SSCNNYE 958
S NNY+
Sbjct: 200 SKPNNYK 206
>gb|AAM64086.1|AF428096_1 3a protein [Cowpea chlorotic mottle virus]
Length = 302
Score = 77.8 bits (190), Expect = 1e-11
Identities = 51/187 (27%), Positives = 94/187 (50%), Gaps = 6/187 (3%)
Frame = +2
Query: 416 DGAVNEYLGSKEFEDDMRQQAGYGRWKGLKVGGGERSFVLVPENSHNKLTGLFRADYDKG 595
D ++ + L S + ++ ++ G + L LVP+N+ ++ LF+++Y+KG
Sbjct: 27 DMSLLQSLFSDKSREEFAKECKLGMYTNLSSNNRLNYIDLVPKNTGSRALNLFKSEYEKG 86
Query: 596 LVPSKGYMHLKWVMVFLVSHVPKSSAGSVTLSLKD----PGWSLTDPLPDT-SFEMALSS 760
+PS G + + V+VFLV + +GSVT+ L D + +P+ T + +SS
Sbjct: 87 HIPSSGVLSIPRVLVFLVRTTTVTESGSVTIRLVDLISASSVEILEPVDGTQEATIPISS 146
Query: 761 LPRVCLLTTDYDLPLSKKPIKLGDRGEMRRMFLLTAKVTGLVGAGDALSL-FPIWDCDFR 937
LP + + YD P+ +G+R R F L ++ G++ +G + + W +FR
Sbjct: 147 LPAIVCFSPSYDCPMQ----MIGNR---HRCFGLVTQLDGVISSGSTVVMSHAYWSANFR 199
Query: 938 SSCNNYE 958
S NNY+
Sbjct: 200 SKPNNYK 206
>gb|ADW09016.1| movement protein 3a [Brome mosaic virus]
Length = 303
Score = 77.8 bits (190), Expect = 1e-11
Identities = 77/284 (27%), Positives = 127/284 (44%), Gaps = 18/284 (6%)
Frame = +2
Query: 416 DGAVNEYLGSKEFEDDMRQQAGYGRWKGLKVGGGERSFVLVPENSHNKLTGLFRADYDKG 595
D + E L S++ ++ + G + LK LVP++ + YDKG
Sbjct: 27 DEKLIESLFSEKAVKEIAAECKLGCYNYLKPNEPRNYIDLVPKSHVSAWLSWATPKYDKG 86
Query: 596 LVPSKGYMHLKWVMVFLVSHVPKSSAGSVTLSLKDPGWS----LTDPLPDTSFEMALSSL 763
+PS+G+M++ V+ FLV + +GS+T+SL D G + + + + + + LS+L
Sbjct: 87 ELPSRGFMNVPRVVCFLVRTTDSAESGSITVSLCDSGKAARAGVLEAIDNQEATIQLSAL 146
Query: 764 PRVCLLTTDYDLPLSKKPIKLGDRGEMRRMFLLTAKVTGLVG-AGDALSLFPIWDCDFRS 940
P + LT YD P+ + GD G R F + +++G+VG G W +F++
Sbjct: 147 PALIALTPSYDCPME---VIGGDSGR-NRCFGIATQLSGVVGTTGSVAVTHAYWQANFKA 202
Query: 941 SCNNYEV-VPCT--SVPITRCIRSDVLSCVAELNRYVKGT---------LLSLPRSSVSG 1084
NNY++ P T +P R R D S L Y++G LL P SV
Sbjct: 203 KPNNYKLHGPATIMVMPFDRLRRLDKKS----LKNYIRGISNQSVDHGYLLGRPLQSVD- 257
Query: 1085 ARFAAPKLINQNESESDSSTAVVPESAGVRSAPPQGL-AQSPAL 1213
+ A L+ + + V +S V ++ GL SP L
Sbjct: 258 -QVAQEDLLVEESESPSAPDRGVKDSKSVSASSVAGLPVSSPTL 300
>ref|YP_233103.1| 3a protein [Cassia yellow blotch virus]
dbj|BAD98318.1| 3a protein [Cassia yellow blotch virus]
Length = 306
Score = 77.4 bits (189), Expect = 1e-11
Identities = 58/178 (32%), Positives = 86/178 (48%), Gaps = 5/178 (2%)
Frame = +2
Query: 437 LGSKEFEDDMRQQAGYGRWKGLKVGGGERSFVLVPENSHNKLTGLFRADYDKGLVPSKGY 616
L S+E D ++ G + L+ LVP+ +K+ LFR +Y+KG +PS G
Sbjct: 33 LFSEESRDQFAKECKLGLYTNLRSSQRFNYVDLVPQAHGSKVLNLFRTEYEKGRIPSSGV 92
Query: 617 MHLKWVMVFLVSHVPKSSAGSVTLSLKD-PGWSLTDPLP--DTSFE--MALSSLPRVCLL 781
+ + V+VFLV S GSVTL L D G S D L D + E + +S LP +
Sbjct: 93 LSIPRVLVFLVRTSSASEGGSVTLRLVDLKGASNLDGLEAVDGTQEATVPISDLPAIVCF 152
Query: 782 TTDYDLPLSKKPIKLGDRGEMRRMFLLTAKVTGLVGAGDALSLFPIWDCDFRSSCNNY 955
+ YD P+ LG+R R F L +++ G+ +G + W FR+ NNY
Sbjct: 153 SPSYDCPME----MLGNR---PRCFGLVSQLDGVSSSGTTVMSHAYWSASFRTKPNNY 203