BLASTX nr result

ID: Rehmannia32_contig00009124 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00009124
         (540 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012834967.1| PREDICTED: glycine-rich RNA-binding protein ...   136   3e-36
ref|XP_022892614.1| glycine-rich RNA-binding protein RZ1C-like i...   112   7e-28
gb|PIN24451.1| Alternative splicing factor SRp20/9G8 (RRM superf...   113   2e-27
emb|CDO99800.1| unnamed protein product [Coffea canephora]            112   4e-27
ref|XP_022892616.1| glycine-rich RNA-binding protein RZ1C-like i...   112   4e-27
ref|XP_022890092.1| glycine-rich RNA-binding protein RZ1C-like i...   104   2e-24
ref|XP_015069805.1| PREDICTED: glycine-rich RNA-binding protein ...   103   5e-24
ref|XP_019068400.1| PREDICTED: glycine-rich RNA-binding protein ...   103   5e-24
ref|XP_006364447.1| PREDICTED: glycine-rich RNA-binding protein ...   101   6e-23
ref|XP_021897869.1| glycine-rich RNA-binding protein RZ1C isofor...   100   6e-23
ref|XP_021897866.1| glycine-rich RNA-binding protein RZ1C isofor...   100   8e-23
ref|XP_016565245.1| PREDICTED: glycine-rich RNA-binding protein ...   100   8e-23
ref|XP_011084273.1| glycine-rich RNA-binding protein RZ1C-like i...   100   1e-22
ref|XP_023925020.1| glycine-rich RNA-binding protein RZ1B-like i...   100   1e-22
ref|XP_016507374.1| PREDICTED: glycine-rich RNA-binding protein ...   100   2e-22
ref|XP_009627103.1| PREDICTED: glycine-rich RNA-binding protein ...   100   2e-22
ref|XP_023925029.1| glycine-rich RNA-binding protein RZ1C-like i...   100   2e-22
ref|XP_019265071.1| PREDICTED: glycine-rich RNA-binding protein ...    99   3e-22
ref|XP_009778384.1| PREDICTED: serine/arginine-rich splicing fac...    99   3e-22
gb|PON42218.1| Splicing factor-like protein [Trema orientalis]         99   5e-22

>ref|XP_012834967.1| PREDICTED: glycine-rich RNA-binding protein RZ1C isoform X2
           [Erythranthe guttata]
          Length = 280

 Score =  136 bits (343), Expect = 3e-36
 Identities = 68/80 (85%), Positives = 74/80 (92%)
 Frame = -2

Query: 350 ITGLCSAKFKA*VKLMSDDGICNSADSSPHVMLERDTGRPRGFGFVTFADRRAMEDAIRD 171
           +T LCSA+F+A VKLMSD GIC SADSS HVM+ERDTGRPRGFGF+TFADRRAM+DAIRD
Sbjct: 4   LTALCSAEFEAWVKLMSDHGIC-SADSSTHVMMERDTGRPRGFGFLTFADRRAMDDAIRD 62

Query: 170 MHGRELGDRSISVNKAQPKM 111
           MHGRELGDR ISVNKAQPKM
Sbjct: 63  MHGRELGDRVISVNKAQPKM 82


>ref|XP_022892614.1| glycine-rich RNA-binding protein RZ1C-like isoform X2 [Olea
           europaea var. sylvestris]
          Length = 176

 Score =  112 bits (279), Expect = 7e-28
 Identities = 53/60 (88%), Positives = 56/60 (93%)
 Frame = -2

Query: 290 ICNSADSSPHVMLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPKM 111
           IC SADSS H+MLERDTGRPRGFGF+TFADRRAMEDAIRDMHGRE G+R ISVNKAQPKM
Sbjct: 4   ICCSADSSTHIMLERDTGRPRGFGFLTFADRRAMEDAIRDMHGREFGERVISVNKAQPKM 63


>gb|PIN24451.1| Alternative splicing factor SRp20/9G8 (RRM superfamily)
           [Handroanthus impetiginosus]
          Length = 279

 Score =  113 bits (283), Expect = 2e-27
 Identities = 54/60 (90%), Positives = 56/60 (93%)
 Frame = -2

Query: 290 ICNSADSSPHVMLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPKM 111
           ICNS DSS HVMLERDTGRPRGFGFVTFADRRAMEDAIR+MHGRE G+R ISVNKAQPKM
Sbjct: 28  ICNSKDSSTHVMLERDTGRPRGFGFVTFADRRAMEDAIREMHGREFGERVISVNKAQPKM 87


>emb|CDO99800.1| unnamed protein product [Coffea canephora]
          Length = 252

 Score =  112 bits (279), Expect = 4e-27
 Identities = 59/96 (61%), Positives = 62/96 (64%)
 Frame = -2

Query: 290 ICNSADSSPHVMLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPKM 111
           IC SADSS HVMLERDTGRPRGFGF+TFADRRAM+DAIR+MHGRE GDR ISVNKAQPKM
Sbjct: 3   ICCSADSSIHVMLERDTGRPRGFGFLTFADRRAMDDAIREMHGREFGDRVISVNKAQPKM 62

Query: 110 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDCFKC 3
                                         DDCFKC
Sbjct: 63  GGDDSDHGYGGGYSSGGRGSYGGGDRSVGQDDCFKC 98


>ref|XP_022892616.1| glycine-rich RNA-binding protein RZ1C-like isoform X2 [Olea
           europaea var. sylvestris]
          Length = 253

 Score =  112 bits (279), Expect = 4e-27
 Identities = 53/60 (88%), Positives = 56/60 (93%)
 Frame = -2

Query: 290 ICNSADSSPHVMLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPKM 111
           IC SADSS H+MLERDTGRPRGFGF+TFADRRAMEDAIRDMHGRE G+R ISVNKAQPKM
Sbjct: 4   ICCSADSSTHIMLERDTGRPRGFGFLTFADRRAMEDAIRDMHGREFGERVISVNKAQPKM 63


>ref|XP_022890092.1| glycine-rich RNA-binding protein RZ1C-like isoform X4 [Olea
           europaea var. sylvestris]
          Length = 243

 Score =  104 bits (260), Expect = 2e-24
 Identities = 51/59 (86%), Positives = 55/59 (93%)
 Frame = -2

Query: 290 ICNSADSSPHVMLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPK 114
           IC+S DSS HVMLERDTGRPRGFGF+TFADRRA+EDAI+DMHGRE GDR ISVNKAQPK
Sbjct: 4   ICSS-DSSTHVMLERDTGRPRGFGFLTFADRRAVEDAIKDMHGREFGDRVISVNKAQPK 61


>ref|XP_015069805.1| PREDICTED: glycine-rich RNA-binding protein RZ1C-like isoform X2
           [Solanum pennellii]
          Length = 246

 Score =  103 bits (258), Expect = 5e-24
 Identities = 49/61 (80%), Positives = 55/61 (90%)
 Frame = -2

Query: 293 GICNSADSSPHVMLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPK 114
           GIC +ADS+  VML+RDTGRPRGFGF+TFADRRAMEDAIR+M G E+GDR ISVNKAQPK
Sbjct: 3   GICRTADSAAQVMLDRDTGRPRGFGFLTFADRRAMEDAIREMDGAEVGDRVISVNKAQPK 62

Query: 113 M 111
           M
Sbjct: 63  M 63


>ref|XP_019068400.1| PREDICTED: glycine-rich RNA-binding protein RZ1C-like isoform X2
           [Solanum lycopersicum]
          Length = 246

 Score =  103 bits (258), Expect = 5e-24
 Identities = 49/61 (80%), Positives = 55/61 (90%)
 Frame = -2

Query: 293 GICNSADSSPHVMLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPK 114
           GIC +ADS+  VML+RDTGRPRGFGF+TFADRRAMEDAIR+M G E+GDR ISVNKAQPK
Sbjct: 3   GICRTADSAAQVMLDRDTGRPRGFGFLTFADRRAMEDAIREMDGAEVGDRVISVNKAQPK 62

Query: 113 M 111
           M
Sbjct: 63  M 63


>ref|XP_006364447.1| PREDICTED: glycine-rich RNA-binding protein RZ1C-like isoform X2
           [Solanum tuberosum]
 ref|XP_015159425.1| PREDICTED: glycine-rich RNA-binding protein RZ1C-like isoform X2
           [Solanum tuberosum]
 ref|XP_015159426.1| PREDICTED: glycine-rich RNA-binding protein RZ1C-like isoform X2
           [Solanum tuberosum]
          Length = 266

 Score =  101 bits (252), Expect = 6e-23
 Identities = 48/60 (80%), Positives = 54/60 (90%)
 Frame = -2

Query: 290 ICNSADSSPHVMLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPKM 111
           IC +ADS+  VML+RDTGRPRGFGF+TFADRRAMEDAIR+M G E+GDR ISVNKAQPKM
Sbjct: 24  ICRTADSAAQVMLDRDTGRPRGFGFLTFADRRAMEDAIREMDGAEVGDRVISVNKAQPKM 83


>ref|XP_021897869.1| glycine-rich RNA-binding protein RZ1C isoform X2 [Carica papaya]
          Length = 222

 Score =  100 bits (249), Expect = 6e-23
 Identities = 46/50 (92%), Positives = 50/50 (100%)
 Frame = -2

Query: 260 VMLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPKM 111
           +MLERDTGRPRGFGF+TFADRRAMEDAIR+MHGRELGDR+ISVNKAQPKM
Sbjct: 38  IMLERDTGRPRGFGFITFADRRAMEDAIREMHGRELGDRTISVNKAQPKM 87


>ref|XP_021897866.1| glycine-rich RNA-binding protein RZ1C isoform X1 [Carica papaya]
 ref|XP_021897867.1| glycine-rich RNA-binding protein RZ1C isoform X1 [Carica papaya]
 ref|XP_021897868.1| glycine-rich RNA-binding protein RZ1C isoform X1 [Carica papaya]
          Length = 231

 Score =  100 bits (249), Expect = 8e-23
 Identities = 46/50 (92%), Positives = 50/50 (100%)
 Frame = -2

Query: 260 VMLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPKM 111
           +MLERDTGRPRGFGF+TFADRRAMEDAIR+MHGRELGDR+ISVNKAQPKM
Sbjct: 47  IMLERDTGRPRGFGFITFADRRAMEDAIREMHGRELGDRTISVNKAQPKM 96


>ref|XP_016565245.1| PREDICTED: glycine-rich RNA-binding protein RZ1B-like isoform X2
           [Capsicum annuum]
 ref|XP_016565246.1| PREDICTED: glycine-rich RNA-binding protein RZ1B-like isoform X2
           [Capsicum annuum]
          Length = 250

 Score =  100 bits (250), Expect = 8e-23
 Identities = 48/60 (80%), Positives = 53/60 (88%)
 Frame = -2

Query: 290 ICNSADSSPHVMLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPKM 111
           IC SADS+  VMLERDTGRPRGFGF+TFADRR MEDAIR+M G E+GDR ISVNKAQPK+
Sbjct: 4   ICRSADSAAQVMLERDTGRPRGFGFLTFADRRTMEDAIREMDGAEVGDRLISVNKAQPKI 63


>ref|XP_011084273.1| glycine-rich RNA-binding protein RZ1C-like isoform X2 [Sesamum
           indicum]
 ref|XP_020551015.1| glycine-rich RNA-binding protein RZ1C-like isoform X2 [Sesamum
           indicum]
          Length = 254

 Score =  100 bits (249), Expect = 1e-22
 Identities = 47/51 (92%), Positives = 49/51 (96%)
 Frame = -2

Query: 263 HVMLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPKM 111
           HVMLERDTGRPRGFGF+TFADRRAMEDAIRDMHGRE G+R ISVNKAQPKM
Sbjct: 10  HVMLERDTGRPRGFGFLTFADRRAMEDAIRDMHGREFGERVISVNKAQPKM 60


>ref|XP_023925020.1| glycine-rich RNA-binding protein RZ1B-like isoform X1 [Quercus
           suber]
          Length = 281

 Score =  100 bits (250), Expect = 1e-22
 Identities = 52/86 (60%), Positives = 54/86 (62%)
 Frame = -2

Query: 260 VMLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPKMXXXXXXXXXX 81
           +MLERDTGRPRGFGF+TFADRR MEDAIRDMHGRELGDR ISVNKAQPKM          
Sbjct: 38  IMLERDTGRPRGFGFITFADRRGMEDAIRDMHGRELGDRVISVNKAQPKMGEDLDHGYRG 97

Query: 80  XXXXXXXXXXXXXXXXXXXXDDCFKC 3
                               DDCFKC
Sbjct: 98  GGYSSSGRGSYGGGDRSTGQDDCFKC 123


>ref|XP_016507374.1| PREDICTED: glycine-rich RNA-binding protein RZ1C-like isoform X2
           [Nicotiana tabacum]
 ref|XP_016507375.1| PREDICTED: glycine-rich RNA-binding protein RZ1C-like isoform X2
           [Nicotiana tabacum]
          Length = 250

 Score =  100 bits (248), Expect = 2e-22
 Identities = 46/60 (76%), Positives = 54/60 (90%)
 Frame = -2

Query: 290 ICNSADSSPHVMLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPKM 111
           IC +ADS+  VML+RDTGRPRGFGF+T+ADRRAMEDAIR+M G E GDR+I+VNKAQPKM
Sbjct: 4   ICRTADSAAQVMLDRDTGRPRGFGFLTYADRRAMEDAIREMDGAEFGDRAITVNKAQPKM 63


>ref|XP_009627103.1| PREDICTED: glycine-rich RNA-binding protein RZ1C-like isoform X2
           [Nicotiana tomentosiformis]
 ref|XP_009627109.1| PREDICTED: glycine-rich RNA-binding protein RZ1C-like isoform X2
           [Nicotiana tomentosiformis]
          Length = 250

 Score =  100 bits (248), Expect = 2e-22
 Identities = 46/60 (76%), Positives = 54/60 (90%)
 Frame = -2

Query: 290 ICNSADSSPHVMLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPKM 111
           IC +ADS+  VML+RDTGRPRGFGF+T+ADRRAMEDAIR+M G E GDR+I+VNKAQPKM
Sbjct: 4   ICRTADSAAQVMLDRDTGRPRGFGFLTYADRRAMEDAIREMDGAEFGDRAITVNKAQPKM 63


>ref|XP_023925029.1| glycine-rich RNA-binding protein RZ1C-like isoform X2 [Quercus
           suber]
          Length = 243

 Score = 99.8 bits (247), Expect = 2e-22
 Identities = 52/85 (61%), Positives = 53/85 (62%)
 Frame = -2

Query: 257 MLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPKMXXXXXXXXXXX 78
           MLERDTGRPRGFGF+TFADRR MEDAIRDMHGRELGDR ISVNKAQPKM           
Sbjct: 1   MLERDTGRPRGFGFITFADRRGMEDAIRDMHGRELGDRVISVNKAQPKMGEDLDHGYRGG 60

Query: 77  XXXXXXXXXXXXXXXXXXXDDCFKC 3
                              DDCFKC
Sbjct: 61  GYSSSGRGSYGGGDRSTGQDDCFKC 85


>ref|XP_019265071.1| PREDICTED: glycine-rich RNA-binding protein RZ1C-like isoform X2
           [Nicotiana attenuata]
          Length = 246

 Score = 99.4 bits (246), Expect = 3e-22
 Identities = 46/60 (76%), Positives = 53/60 (88%)
 Frame = -2

Query: 290 ICNSADSSPHVMLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPKM 111
           IC +ADS+  VML+RDTGRPRGFGF+T+ADRRAMEDAIR+M G E GDR I+VNKAQPKM
Sbjct: 4   ICRTADSAAQVMLDRDTGRPRGFGFLTYADRRAMEDAIREMDGAEFGDRPITVNKAQPKM 63


>ref|XP_009778384.1| PREDICTED: serine/arginine-rich splicing factor RSZ21A-like isoform
           X2 [Nicotiana sylvestris]
 ref|XP_016443985.1| PREDICTED: glycine-rich RNA-binding protein RZ1C-like isoform X2
           [Nicotiana tabacum]
          Length = 250

 Score = 99.4 bits (246), Expect = 3e-22
 Identities = 46/60 (76%), Positives = 53/60 (88%)
 Frame = -2

Query: 290 ICNSADSSPHVMLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPKM 111
           IC +ADS+  VML+RDTGRPRGFGF+T+ADRRAMEDAIR+M G E GDR I+VNKAQPKM
Sbjct: 4   ICRTADSAAQVMLDRDTGRPRGFGFLTYADRRAMEDAIREMDGAEFGDRPITVNKAQPKM 63


>gb|PON42218.1| Splicing factor-like protein [Trema orientalis]
          Length = 277

 Score = 99.4 bits (246), Expect = 5e-22
 Identities = 51/86 (59%), Positives = 53/86 (61%)
 Frame = -2

Query: 260 VMLERDTGRPRGFGFVTFADRRAMEDAIRDMHGRELGDRSISVNKAQPKMXXXXXXXXXX 81
           +MLERDTGRPRGFGF+TFADRR MEDAIRDMHGRE GDR ISVNKAQPKM          
Sbjct: 38  IMLERDTGRPRGFGFITFADRRGMEDAIRDMHGREFGDRIISVNKAQPKMGDDDTDHGYR 97

Query: 80  XXXXXXXXXXXXXXXXXXXXDDCFKC 3
                               DDCFKC
Sbjct: 98  GGYSSGGRRGYGGGDRSVGQDDCFKC 123


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