BLASTX nr result
ID: Rehmannia32_contig00008871
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia32_contig00008871
(838 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotei... 307 1e-97
gb|OAE31340.1| hypothetical protein AXG93_4510s1160 [Marchantia ... 203 8e-59
gb|PNX96445.1| copia LTR rider [Trifolium pratense] 197 1e-53
gb|PKU72844.1| Retrovirus-related Pol polyprotein from transposo... 195 7e-53
gb|KYP36391.1| Retrovirus-related Pol polyprotein from transposo... 188 1e-52
gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Ja... 192 1e-51
gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subc... 192 1e-51
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 191 2e-51
gb|KYP63308.1| Retrovirus-related Pol polyprotein from transposo... 185 2e-51
gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygro... 191 3e-51
gb|KYP48029.1| Retrovirus-related Pol polyprotein from transposo... 185 1e-50
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 184 4e-49
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 184 4e-49
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 184 5e-49
emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group] 182 2e-48
emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa] 179 2e-47
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 179 3e-47
ref|XP_024038695.1| LOW QUALITY PROTEIN: DNA (cytosine-5)-methyl... 178 6e-47
gb|KZV37190.1| hypothetical protein F511_15110 [Dorcoceras hygro... 169 6e-47
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 178 7e-47
>ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 [Erythranthe guttata]
Length = 598
Score = 307 bits (787), Expect = 1e-97
Identities = 158/281 (56%), Positives = 199/281 (70%), Gaps = 4/281 (1%)
Frame = -3
Query: 833 TAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLG 654
TA YLINRSPS+PL G PESV+ GK++D SNL VFG AAFVH +GDKLEPR KC+FLG
Sbjct: 341 TATYLINRSPSMPLNGDLPESVWCGKKVDLSNLHVFGYAAFVHHKGDKLEPRFVKCIFLG 400
Query: 653 YPEGVKGYRLWLRGEPGFKAITSRDVIFNESDFPCLSA-TMPLPESEPAPNKVEQLLGLS 477
YP+GVKGYRLWL+G+ G+K I SRDVIFNES FPCL+ + +P+S PN+VEQL
Sbjct: 401 YPDGVKGYRLWLKGDFGYKIIISRDVIFNESGFPCLAVPNVVIPQS--TPNEVEQL---- 454
Query: 476 HIDETENLHVXXXXXXXXXXXXXXXXXNMPENVDNAEMHDDLVDLNDNEP--EELGNYQL 303
++V ++E+ ++L D P ++L +YQL
Sbjct: 455 --------------------------PIKSDDVSDSELSENLQDQTVELPNVDDLSDYQL 488
Query: 302 ARDRTRR-NIRQPTRFDDFQMISYVFSVFESIDNCEPKTYQDALKSEHSQEWLNAMHEEM 126
ARDR RR ++R+P FDDF + S+VF+VFES+D EPK+Y+DALKS+ S EWLN+M++EM
Sbjct: 489 ARDRPRREHVRKPKHFDDFHLASHVFNVFESLDGNEPKSYKDALKSDKSTEWLNSMNDEM 548
Query: 125 NSLHVNNTWILVPKPENCSLVDCKWLFKVKNENDSVRYKAR 3
NSLHVN TW LVPKP NCS+VDC WLFKVKNE DS++YKAR
Sbjct: 549 NSLHVNQTWELVPKPVNCSVVDCNWLFKVKNEVDSIKYKAR 589
>gb|OAE31340.1| hypothetical protein AXG93_4510s1160 [Marchantia polymorpha subsp.
ruderalis]
Length = 467
Score = 203 bits (517), Expect = 8e-59
Identities = 114/289 (39%), Positives = 157/289 (54%), Gaps = 12/289 (4%)
Frame = -3
Query: 833 TAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLG 654
TAAYL+NR PS ++ K PE +S + D ++L+VFGC+A+VHQ KLEPR+ KCVFLG
Sbjct: 29 TAAYLVNRCPSSAIEFKTPEEKWSSRPPDLNHLRVFGCSAYVHQSQGKLEPRAIKCVFLG 88
Query: 653 YPEGVKGYRLWLRGEPGFKAITSRDVIFNESDFPCLSATMPLPESEPAPNKVEQLLGLSH 474
YP+G KGYRLW+R GFK I SRDVIFNE+ FPC S T P N E L +
Sbjct: 89 YPQGTKGYRLWVREGNGFKIINSRDVIFNETIFPCQSRTDPNSSVVSVSNPAENLENIIQ 148
Query: 473 IDETENLHVXXXXXXXXXXXXXXXXXNMPENVDNAEMHDD------LVDLNDNEPEELGN 312
+ T ++ P+ V H D N + + +
Sbjct: 149 TEPTIHVTPPQAQDQRNSSDHEDQDVQAPDQVSEPSNHTDQEQGEMTSHSNSEQSLQQCD 208
Query: 311 YQLARDRTRRNIRQPTRFD---DFQMISYVFSVFESIDNCEPKTYQDALKSEHSQEWLNA 141
Y L RDR +R R P R+ ++++Y F+ I EP YQDA+ S++W A
Sbjct: 209 YILTRDREKRVSRPPQRYGFSAYSEILAYAFTSALEIQMKEPLYYQDAIAGSDSEKWKEA 268
Query: 140 MHEEMNSLHVNNTWILVPKPENCSLVDCKWLFKVKN---ENDSVRYKAR 3
M EEM SL+ N TW +VP+P++ V C+WL+K+K ++ R+KAR
Sbjct: 269 MREEMESLYRNKTWNIVPRPKDQKPVTCRWLYKIKEGVVNSEEPRFKAR 317
>gb|PNX96445.1| copia LTR rider [Trifolium pratense]
Length = 1318
Score = 197 bits (502), Expect = 1e-53
Identities = 116/284 (40%), Positives = 158/284 (55%), Gaps = 7/284 (2%)
Frame = -3
Query: 833 TAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLG 654
TA YLINR PS L K PE V+SG D L+VFGC A+ H R DK+EPR+ KC+F+G
Sbjct: 606 TATYLINRCPSTALDMKTPEEVWSGHPPDLDKLRVFGCVAYAHIRQDKVEPRALKCMFMG 665
Query: 653 YPEGVKGYRLWLRGEPGFK-AITSRDVIFNESDFPCLSATMPLPESEPAPNKVEQL---L 486
YPEGVK YRLW EPG K ITSRDV+FNE++ +E + ++EQ+ +
Sbjct: 666 YPEGVKAYRLWCL-EPGHKRCITSRDVVFNEAEMAFKKTVDVGRSTETSDEELEQVEIPV 724
Query: 485 GLSHIDETENLHVXXXXXXXXXXXXXXXXXNMPENVDNAEMHDDLVDLNDNEPEELGNYQ 306
+ H+D LH+ + E +NAE ++ D +Y
Sbjct: 725 EVEHVD--AELHI---------------PDEVEEEAENAEEVEETDD----------DYL 757
Query: 305 LARDRTRRNIRQPTRFDDFQMISYVFSVFESIDNCEPKTYQDALKSEHSQEWLNAMHEEM 126
L+RDR+RR I+ P R +I+Y + + EP+ Y++ ++S + EWL AM +EM
Sbjct: 758 LSRDRSRRVIKAPQRLGYADLIAYALISASEVLDEEPRDYKEVMRSRNKTEWLKAMDDEM 817
Query: 125 NSLHVNNTWILVPKPENCSLVDCKWLFKVKNENDSV---RYKAR 3
SLH N+TW L+ KP LV CKW+FKVK + V RYKAR
Sbjct: 818 KSLHDNHTWELIKKPAGARLVSCKWIFKVKEGIEGVTSKRYKAR 861
>gb|PKU72844.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 993
Score = 195 bits (495), Expect = 7e-53
Identities = 112/284 (39%), Positives = 160/284 (56%), Gaps = 7/284 (2%)
Frame = -3
Query: 833 TAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLG 654
TA YL+NR+PS + K P+ ++ GK ++L+VFGC A+ HQ KLEPRS KCVFLG
Sbjct: 554 TACYLVNRTPSSAINFKTPQELWKGKPPSLTHLRVFGCLAYPHQNKGKLEPRSIKCVFLG 613
Query: 653 YPEGVKGYRLWLRGEPGFKAITSRDVIFNESDFPCLSATMPLPESEPAPNKVEQLLGLSH 474
YP GVKGYRLW PG K I SRDVIFNE+ + + ESE NK + + +
Sbjct: 614 YPTGVKGYRLWDLSSPGVKTIISRDVIFNEN-------RLYISESE---NKDTTISSIEN 663
Query: 473 IDETENLHVXXXXXXXXXXXXXXXXXNMPENVDNAEMHDDLVDLNDNEPEELG----NYQ 306
D ++ + P N + E + +NEPE + +Y
Sbjct: 664 SDSNKDYY--------------EFEVEPPSNTLSFENPQQSTE-PENEPEPVSENNHDYL 708
Query: 305 LARDRTRRNIRQPTRFDDFQMISYVFSVFESIDNCEPKTYQDALKSEHSQEWLNAMHEEM 126
L+RDR RRNI+ P+++ ++I Y ++ EP +Y++A+ + S+ W+ AM +E
Sbjct: 709 LSRDRERRNIKPPSKYGYAELIEYALLSALEYEDSEPISYKEAVSCKDSENWVKAMQDEY 768
Query: 125 NSLHVNNTWILVPKPENCSLVDCKWLFKVK---NENDSVRYKAR 3
+SL NNTWILV K EN +V CKW++K+K +N+ RYKAR
Sbjct: 769 DSLIKNNTWILVNKKENQKVVSCKWIYKIKEGNTKNEPNRYKAR 812
>gb|KYP36391.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 498
Score = 188 bits (477), Expect = 1e-52
Identities = 109/283 (38%), Positives = 152/283 (53%), Gaps = 6/283 (2%)
Frame = -3
Query: 833 TAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLG 654
TAAYLINR PS L K P + GK +D+SNL+VFG A+ H + KLEPR+ KCVF+G
Sbjct: 208 TAAYLINRCPSSALNNKTPMEAWHGKPVDYSNLRVFGSLAYAHVKEGKLEPRAVKCVFIG 267
Query: 653 YPEGVKGYRLWLRGEPGFKAITSRDVIFNESDFPCLSATMPLPESEPAPN---KVEQLLG 483
YP+GVKGY+LW + G K I SRDV F+E+ L + ES + +VE
Sbjct: 268 YPDGVKGYKLWKLEKGGGKCIISRDVTFDETKLGILE-EQQMEESSSKDHVQFEVESSTH 326
Query: 482 LSHIDETENLHVXXXXXXXXXXXXXXXXXNMPENVDNAEMHDDLVDLNDNEPEELGNYQL 303
S I++TEN E D A ++ +++ +YQL
Sbjct: 327 SSEINQTEN---------------------SEEITDGASSSGEVA-----RNQDISSYQL 360
Query: 302 ARDRTRRNIRQPTRFDDFQMISYVFSVFESIDNCEPKTYQDALKSEHSQEWLNAMHEEMN 123
RDR RR + +R+ +I Y + + EPKTY++A++S +Q+W+ A+HEEM
Sbjct: 361 VRDRARRVPKPSSRYGYADLICYALNTANEVQGFEPKTYKEAMESSEAQDWMKAVHEEMK 420
Query: 122 SLHVNNTWILVPKPENCSLVDCKWLFKVKNENDSV---RYKAR 3
SL N TW LV P ++ CKW+FK K+ V R+KAR
Sbjct: 421 SLQKNLTWKLVSLPTGKKVISCKWIFKRKDGIPGVEAPRFKAR 463
>gb|AAM08562.1|AC092749_15 Putative retroelement [Oryza sativa Japonica Group]
gb|AAM10749.1|AC112514_2 Putative retroelement [Oryza sativa Japonica Group]
Length = 1225
Score = 192 bits (487), Expect = 1e-51
Identities = 111/285 (38%), Positives = 158/285 (55%), Gaps = 9/285 (3%)
Frame = -3
Query: 833 TAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLG 654
TA YLINRSPS + K P V+SG ++S+L+VFGC A+ H KLEPR+ KC+FLG
Sbjct: 588 TACYLINRSPSYAIDKKTPIKVWSGSPANYSDLRVFGCIAYAHVDNSKLEPRAIKCIFLG 647
Query: 653 YPEGVKGYRLWLRGEPGFKAITSRDVIFNES----DFPCLSATMPLPESEPAPNKVEQLL 486
YP GVKGY+LW K + SR+V+F+ES D P S +P+ E A +VE L+
Sbjct: 648 YPSGVKGYKLWCPETK--KVVISRNVVFHESVMLHDKP--STNVPVESQEKASVQVEHLI 703
Query: 485 GLSHIDETENLHVXXXXXXXXXXXXXXXXXNMPENVDNAEMHDDLVDLNDNEPEELGNYQ 306
H E EN+ + N+D + D + P+ +
Sbjct: 704 SSGHAPEKENVAI---------------------NLDAPVIEDSDSSIVQQSPK----HS 738
Query: 305 LARDRTRRNIRQPTRF-DDFQMISYVFSVFESID-NCEPKTYQDALKSEHSQEWLNAMHE 132
+A+D+ +RNI+ P R+ ++ +++Y SV E I+ N EP TY DA+ S+ W+ AMH+
Sbjct: 739 IAKDKPKRNIKPPRRYIEEANIVAYALSVAEEIEGNVEPSTYSDAIVSDDCNRWITAMHD 798
Query: 131 EMNSLHVNNTWILVPKPENCSLVDCKWLFKVK---NENDSVRYKA 6
EM SL N+TW LV P+ + CKW+FK K + +D RYKA
Sbjct: 799 EMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKA 843
>gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1262
Score = 192 bits (487), Expect = 1e-51
Identities = 111/285 (38%), Positives = 158/285 (55%), Gaps = 9/285 (3%)
Frame = -3
Query: 833 TAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLG 654
TA YLINRSPS + K P V+SG ++S+L+VFGC A+ H KLEPR+ KC+FLG
Sbjct: 625 TACYLINRSPSYAIDKKTPIKVWSGSPANYSDLRVFGCIAYAHVDNSKLEPRAIKCIFLG 684
Query: 653 YPEGVKGYRLWLRGEPGFKAITSRDVIFNES----DFPCLSATMPLPESEPAPNKVEQLL 486
YP GVKGY+LW K + SR+V+F+ES D P S +P+ E A +VE L+
Sbjct: 685 YPSGVKGYKLWCPETK--KVVISRNVVFHESVMLHDKP--STNVPVESQEKASVQVEHLI 740
Query: 485 GLSHIDETENLHVXXXXXXXXXXXXXXXXXNMPENVDNAEMHDDLVDLNDNEPEELGNYQ 306
H E EN+ + N+D + D + P+ +
Sbjct: 741 SSGHAPEKENVAI---------------------NLDAPVIEDSDSSIVQQSPK----HS 775
Query: 305 LARDRTRRNIRQPTRF-DDFQMISYVFSVFESID-NCEPKTYQDALKSEHSQEWLNAMHE 132
+A+D+ +RNI+ P R+ ++ +++Y SV E I+ N EP TY DA+ S+ W+ AMH+
Sbjct: 776 IAKDKPKRNIKPPRRYIEEANIVAYALSVAEEIEGNVEPSTYSDAIVSDDCNRWITAMHD 835
Query: 131 EMNSLHVNNTWILVPKPENCSLVDCKWLFKVK---NENDSVRYKA 6
EM SL N+TW LV P+ + CKW+FK K + +D RYKA
Sbjct: 836 EMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKA 880
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 2340
Score = 191 bits (486), Expect = 2e-51
Identities = 111/286 (38%), Positives = 157/286 (54%), Gaps = 9/286 (3%)
Frame = -3
Query: 833 TAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLG 654
TA YLINRSPS + K P V+SG ++S+L+VFGC A+ H KLEPR+ KC+FLG
Sbjct: 834 TACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLG 893
Query: 653 YPEGVKGYRLWLRGEPGFKAITSRDVIFNES----DFPCLSATMPLPESEPAPNKVEQLL 486
YP GVKGY+LW K + SR+V+F+ES D P S +P+ E A +VE L+
Sbjct: 894 YPSGVKGYKLWCPETK--KVVISRNVVFHESVMLHDKP--STNVPVESQEKASVQVEHLI 949
Query: 485 GLSHIDETENLHVXXXXXXXXXXXXXXXXXNMPENVDNAEMHDDLVDLNDNEPEELGNYQ 306
H E E++ + N D + D + P+
Sbjct: 950 SSGHAPEKEDVAI---------------------NQDEPVIEDSNSSIVQQSPKR----S 984
Query: 305 LARDRTRRNIRQPTRF-DDFQMISYVFSVFESID-NCEPKTYQDALKSEHSQEWLNAMHE 132
+A+DR +RNI+ P R+ ++ +++Y SV E I+ N EP TY +A+ S+ W+ AMH+
Sbjct: 985 IAKDRPKRNIKPPQRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHD 1044
Query: 131 EMNSLHVNNTWILVPKPENCSLVDCKWLFKVK---NENDSVRYKAR 3
EM SL N+TW LV P+ + CKW+FK K + +D RYKAR
Sbjct: 1045 EMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGISSSDEARYKAR 1090
>gb|KYP63308.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 516
Score = 185 bits (470), Expect = 2e-51
Identities = 106/268 (39%), Positives = 150/268 (55%), Gaps = 2/268 (0%)
Frame = -3
Query: 833 TAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLG 654
+A Y INR PS L+ K P+ V+SG+++D+S L+VFGC A+ H + DKLEPR+ K +F+G
Sbjct: 155 SAVYCINRCPSTALEFKTPQEVWSGRKVDYSELRVFGCIAYAHIKQDKLEPRALKFIFIG 214
Query: 653 YPEGVKGYRLWLRGEPGF-KAITSRDVIFNESDFPCLSATMPLPESEPAPNKVEQLLGLS 477
YPEGVKGYRLW EPG+ K + SRDV+FNE + L P+KVE +
Sbjct: 215 YPEGVKGYRLWCL-EPGYKKCLISRDVVFNEIEMANL----------VKPSKVE--IHEK 261
Query: 476 HIDETENLHVXXXXXXXXXXXXXXXXXNMPENVDNAEMHDDLVDLNDNEPEELGNYQLAR 297
D+T + V + + + D+E + +Y LAR
Sbjct: 262 SQDQTIKIEVEFTVITEAKAATQRQQHILQQEL-------------DDEERSIQSYSLAR 308
Query: 296 DRTRRNIRQPTRFDDFQMISYVFSV-FESIDNCEPKTYQDALKSEHSQEWLNAMHEEMNS 120
DR RR + P R+ ++S+ F+V + D+ EPK+Y +A++S+ WL AM EEM S
Sbjct: 309 DRERRAHKAPQRYGHADLVSFAFTVGLDLEDHDEPKSYSEAMRSKDKNSWLKAMKEEMGS 368
Query: 119 LHVNNTWILVPKPENCSLVDCKWLFKVK 36
L N TWILV KP+ +V KW+FK K
Sbjct: 369 LEKNQTWILVDKPKEQKIVGSKWIFKRK 396
>gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygrometricum]
Length = 1309
Score = 191 bits (484), Expect = 3e-51
Identities = 111/282 (39%), Positives = 149/282 (52%), Gaps = 5/282 (1%)
Frame = -3
Query: 833 TAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLG 654
TA+YLINR PS L+ K P+ V++G DFSNL+ FGC AF H R DKL+PR+KKCV LG
Sbjct: 606 TASYLINRCPSTALEFKTPQEVWTGHRPDFSNLRAFGCTAFAHIRQDKLQPRAKKCVLLG 665
Query: 653 YPEGVKGYRLWLRGEPGFKAITSRDVIFNESDFPCLS--ATMPLPESEPAPNKVEQLLGL 480
YPE VKGY+LW + + SRDV+FNE +FP S + LP A +VE
Sbjct: 666 YPENVKGYKLWCIETGEERCLISRDVVFNEEEFPLKSKGTSETLPGVHGAKQEVE----- 720
Query: 479 SHIDETENLHVXXXXXXXXXXXXXXXXXNMPENVDNAEMHDDLVDLNDNEPEELGNYQLA 300
I N E VDN ++ D D +G+YQL
Sbjct: 721 --ISPRNN-----------------------ELVDNTKVVSG-PDAEDINAHAVGDYQLI 754
Query: 299 RDRTRRNIRQPTRFDDFQMISYVFSVFESIDNCEPKTYQDALKSEHSQEWLNAMHEEMNS 120
RDR +R ++ P +F + ++ F+ +D EP +Y++A+ S W+ AM +EM+S
Sbjct: 755 RDREKRIVKAPQKFGFADLTAFAFTAAYELDEVEPLSYEEAVSSRDKVHWIEAMKQEMDS 814
Query: 119 LHVNNTWILVPKPENCSLVDCKWLFKVKNENDSV---RYKAR 3
L TW LV +P LV CKW++K K V RYKAR
Sbjct: 815 LRKKGTWTLVDRPNKQRLVGCKWVYKRKQGIPGVELPRYKAR 856
>gb|KYP48029.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 634
Score = 185 bits (470), Expect = 1e-50
Identities = 106/268 (39%), Positives = 150/268 (55%), Gaps = 2/268 (0%)
Frame = -3
Query: 833 TAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLG 654
+A Y INR PS L+ K P+ V+SG+++D+S L+VFGC A+ H + DKLEPR+ K +F+G
Sbjct: 273 SAVYCINRCPSTALEFKTPQEVWSGRKVDYSELRVFGCIAYAHIKQDKLEPRALKFIFIG 332
Query: 653 YPEGVKGYRLWLRGEPGF-KAITSRDVIFNESDFPCLSATMPLPESEPAPNKVEQLLGLS 477
YPEGVKGYRLW EPG+ K + SRDV+FNE + L P+KVE +
Sbjct: 333 YPEGVKGYRLWCL-EPGYKKCLISRDVVFNEIEMANL----------VKPSKVE--IHEK 379
Query: 476 HIDETENLHVXXXXXXXXXXXXXXXXXNMPENVDNAEMHDDLVDLNDNEPEELGNYQLAR 297
D+T + V + + + D+E + +Y LAR
Sbjct: 380 SQDQTIKIEVEFTVITEAKAATQRQQHILQQEL-------------DDEERSIQSYSLAR 426
Query: 296 DRTRRNIRQPTRFDDFQMISYVFSV-FESIDNCEPKTYQDALKSEHSQEWLNAMHEEMNS 120
DR RR + P R+ ++S+ F+V + D+ EPK+Y +A++S+ WL AM EEM S
Sbjct: 427 DRERRAHKAPQRYGHADLVSFAFTVGLDLEDHDEPKSYSEAMRSKDKNSWLKAMKEEMGS 486
Query: 119 LHVNNTWILVPKPENCSLVDCKWLFKVK 36
L N TWILV KP+ +V KW+FK K
Sbjct: 487 LEKNQTWILVDKPKEQKIVGSKWIFKRK 514
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 184 bits (468), Expect = 4e-49
Identities = 108/286 (37%), Positives = 155/286 (54%), Gaps = 9/286 (3%)
Frame = -3
Query: 833 TAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLG 654
T YLINRSPS K P V+SG ++S+L+VFGC A+ H KLEPR+ KC+FLG
Sbjct: 662 TTCYLINRSPSYATDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLG 721
Query: 653 YPEGVKGYRLWLRGEPGFKAITSRDVIFNES----DFPCLSATMPLPESEPAPNKVEQLL 486
YP GVKGY+LW K + SR+V+F+ES D P S +P+ E A +VE L+
Sbjct: 722 YPSGVKGYKLWCPETK--KVVISRNVVFHESVILHDKP--STNVPVESQEKASVQVEHLI 777
Query: 485 GLSHIDETENLHVXXXXXXXXXXXXXXXXXNMPENVDNAEMHDDLVDLNDNEPEELGNYQ 306
H E EN+ + N D + D + + ++
Sbjct: 778 SSGHAPEKENVAI---------------------NQDAPVIEDS----DSSIVQQSSKRS 812
Query: 305 LARDRTRRNIRQPTRF-DDFQMISYVFSVFESID-NCEPKTYQDALKSEHSQEWLNAMHE 132
+A+D+ +RNI+ P R+ ++ +++Y SV E I+ N EP TY +A+ S+ W+ AMH+
Sbjct: 813 IAKDKPKRNIKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHD 872
Query: 131 EMNSLHVNNTWILVPKPENCSLVDCKWLFKVK---NENDSVRYKAR 3
EM SL N+TW V P+ + CKW+FK K + +D RYKAR
Sbjct: 873 EMESLKKNHTWEFVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKAR 918
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 184 bits (468), Expect = 4e-49
Identities = 108/286 (37%), Positives = 155/286 (54%), Gaps = 9/286 (3%)
Frame = -3
Query: 833 TAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLG 654
T YLINRSPS K P V+SG ++S+L+VFGC A+ H KLEPR+ KC+FLG
Sbjct: 662 TTCYLINRSPSYATDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLG 721
Query: 653 YPEGVKGYRLWLRGEPGFKAITSRDVIFNES----DFPCLSATMPLPESEPAPNKVEQLL 486
YP GVKGY+LW K + SR+V+F+ES D P S +P+ E A +VE L+
Sbjct: 722 YPSGVKGYKLWCPETK--KVVISRNVVFHESVILHDKP--STNVPVESQEKASVQVEHLI 777
Query: 485 GLSHIDETENLHVXXXXXXXXXXXXXXXXXNMPENVDNAEMHDDLVDLNDNEPEELGNYQ 306
H E EN+ + N D + D + + ++
Sbjct: 778 SSGHAPEKENVAI---------------------NQDAPVIEDS----DSSIVQQSSKRS 812
Query: 305 LARDRTRRNIRQPTRF-DDFQMISYVFSVFESID-NCEPKTYQDALKSEHSQEWLNAMHE 132
+A+D+ +RNI+ P R+ ++ +++Y SV E I+ N EP TY +A+ S+ W+ AMH+
Sbjct: 813 IAKDKPKRNIKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSEAIVSDDCNRWITAMHD 872
Query: 131 EMNSLHVNNTWILVPKPENCSLVDCKWLFKVK---NENDSVRYKAR 3
EM SL N+TW V P+ + CKW+FK K + +D RYKAR
Sbjct: 873 EMESLKKNHTWEFVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKAR 918
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 184 bits (467), Expect = 5e-49
Identities = 108/286 (37%), Positives = 156/286 (54%), Gaps = 9/286 (3%)
Frame = -3
Query: 833 TAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLG 654
TA YLINRSP + K P V+SG ++S+L+VFGC A+ H KLEPR+ KC+FLG
Sbjct: 599 TACYLINRSPGYAIDKKTPIEVWSGSPTNYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLG 658
Query: 653 YPEGVKGYRLWLRGEPGFKAITSRDVIFNES----DFPCLSATMPLPESEPAPNKVEQLL 486
Y GVKGY+LW K + SR+V+F+ES D P S +P+ E A +VE L+
Sbjct: 659 YASGVKGYKLWCPETK--KVVISRNVVFHESVILHDKP--STNVPVESQEKASVQVEHLI 714
Query: 485 GLSHIDETENLHVXXXXXXXXXXXXXXXXXNMPENVDNAEMHDDLVDLNDNEPEELGNYQ 306
H E E++ + N D + D + P+
Sbjct: 715 SSGHAPEKEDVAI---------------------NQDAPVIEDSDSSIVHQSPKR----S 749
Query: 305 LARDRTRRNIRQPTRF-DDFQMISYVFSVFESID-NCEPKTYQDALKSEHSQEWLNAMHE 132
+A+D+ +RNI+ P R+ ++ ++++Y SV E I+ N EP TY +A+ S+ W+ AMH+
Sbjct: 750 IAKDKPKRNIKPPRRYIEEAKIVAYALSVAEKIEGNAEPSTYSEAIVSDDCNRWITAMHD 809
Query: 131 EMNSLHVNNTWILVPKPENCSLVDCKWLFKVK---NENDSVRYKAR 3
EM SL N+TW LV P+ + CKW+FK K + +D RYKAR
Sbjct: 810 EMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKAR 855
>emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]
Length = 1007
Score = 182 bits (463), Expect = 2e-48
Identities = 107/286 (37%), Positives = 154/286 (53%), Gaps = 9/286 (3%)
Frame = -3
Query: 833 TAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLG 654
TA YLINRSPS + K P V+S +++S+L+VFGC A+ H KLEPR+ KC+FLG
Sbjct: 409 TACYLINRSPSYAIDKKTPIEVWSDSPVNYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLG 468
Query: 653 YPEGVKGYRLWLRGEPGFKAITSRDVIFNES----DFPCLSATMPLPESEPAPNKVEQLL 486
YP G+KGY+LW K + SR+V+F+ES D P S +P+ E A +VE L+
Sbjct: 469 YPSGMKGYKLWCPKTK--KVVISRNVVFHESVMLHDKP--STNVPVESQEKASVQVEHLI 524
Query: 485 GLSHIDETENLHVXXXXXXXXXXXXXXXXXNMPENVDNAEMHDDLVDLNDNEPEELGNYQ 306
H E EN+ + N D + D P+
Sbjct: 525 SSGHAPEKENVAI---------------------NQDVPVIEDSDSSTVQQSPKRF---- 559
Query: 305 LARDRTRRNIRQPTRF-DDFQMISYVFSVFESID-NCEPKTYQDALKSEHSQEWLNAMHE 132
+A+D+ +RN + P R+ ++ +++Y SV E I+ N EP TY +A+ S+ W+ AMH+
Sbjct: 560 IAKDKPKRNTKPPQRYIEEANIVAYALSVAEDIEGNAEPSTYSEAIVSDDCNRWITAMHD 619
Query: 131 EMNSLHVNNTWILVPKPENCSLVDCKWLFKVK---NENDSVRYKAR 3
EM SL N+TW LV P+ + CKW+FK K + +D YKAR
Sbjct: 620 EMESLEKNHTWELVKLPKEKKPIRCKWIFKRKKGISPSDEAMYKAR 665
>emb|CAH65740.1| OSIGBa0127D24.3 [Oryza sativa]
Length = 1009
Score = 179 bits (455), Expect = 2e-47
Identities = 106/285 (37%), Positives = 152/285 (53%), Gaps = 9/285 (3%)
Frame = -3
Query: 833 TAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLG 654
TA YLINRSPS + K P V+S +S+L+VF C A+ H KLEPR+ KC+FLG
Sbjct: 448 TACYLINRSPSYAIDKKTPIEVWSSSPAKYSDLRVFSCTAYAHVDNGKLEPRAIKCIFLG 507
Query: 653 YPEGVKGYRLWLRGEPGFKAITSRDVIFNES----DFPCLSATMPLPESEPAPNKVEQLL 486
YP GVKGY+LW K + +R+V+F+ES D P S +P+ E A +VE L+
Sbjct: 508 YPSGVKGYKLWCPETK--KVVINRNVVFHESVMLHDKP--STNVPVESQEKASVQVEHLI 563
Query: 485 GLSHIDETENLHVXXXXXXXXXXXXXXXXXNMPENVDNAEMHDDLVDLNDNEPEELGNYQ 306
H E E++ + N D + D + P+
Sbjct: 564 SSGHAPEKEDVAI---------------------NQDAPVIEDSDSSIVQQSPKR----S 598
Query: 305 LARDRTRRNIRQPTRF-DDFQMISYVFSVFESID-NCEPKTYQDALKSEHSQEWLNAMHE 132
+A+DR +RN + P ++ ++ +++Y SV E I+ N EP TY DA+ S+ W+ AMH+
Sbjct: 599 IAKDRPKRNTKPPRKYIEEANIVTYALSVAEEIEGNTEPSTYSDAIVSDDCNRWITAMHD 658
Query: 131 EMNSLHVNNTWILVPKPENCSLVDCKWLFKVK---NENDSVRYKA 6
EM SL N+TW LV P+ + CKW+FK K + +D RYKA
Sbjct: 659 EMESLEKNHTWELVKLPKEKKPIRCKWIFKRKEGMSPSDEARYKA 703
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 179 bits (454), Expect = 3e-47
Identities = 107/286 (37%), Positives = 152/286 (53%), Gaps = 9/286 (3%)
Frame = -3
Query: 833 TAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLG 654
TA YLINRSPS + K P V+SG ++S+L+VFGC A+ H KLEPR KC+FLG
Sbjct: 536 TACYLINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRVIKCIFLG 595
Query: 653 YPEGVKGYRLWLRGEPGFKAITSRDVIFNES----DFPCLSATMPLPESEPAPNKVEQLL 486
Y GVKGY+LW K + SR+V+F+ES D P S +P+ E +VE L+
Sbjct: 596 YLSGVKGYKLWCPETK--KVVISRNVVFHESIMLHDKP--STNVPVESQEKVSVQVEHLI 651
Query: 485 GLSHIDETENLHVXXXXXXXXXXXXXXXXXNMPENVDNAEMHDDLVDLNDNEPEELGNYQ 306
H E E++ + N D + D + P+
Sbjct: 652 SSGHAPEKEDVAI---------------------NQDAPVIEDSDSSIVQQSPKR----S 686
Query: 305 LARDRTRRNIRQPTRF-DDFQMISYVFSVFESID-NCEPKTYQDALKSEHSQEWLNAMHE 132
+A+DR +RN + P R+ ++ +++Y SV E I+ N EP TY DA+ S+ W+ AMH+
Sbjct: 687 IAKDRPKRNTKPPRRYIEEANIVAYALSVAEEIEGNAEPSTYSDAIVSDDCNRWITAMHD 746
Query: 131 EMNSLHVNNTWILVPKPENCSLVDCKWLFKVK---NENDSVRYKAR 3
EM SL N++W L P+ + CKW+FK K + +D RYKAR
Sbjct: 747 EMESLEKNHSWELEKLPKEKKPIRCKWIFKRKEGMSPSDEARYKAR 792
>ref|XP_024038695.1| LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase 1-like
[Citrus clementina]
Length = 2164
Score = 178 bits (452), Expect = 6e-47
Identities = 108/282 (38%), Positives = 154/282 (54%), Gaps = 6/282 (2%)
Frame = -3
Query: 833 TAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLG 654
T AYLINRSPS L K P+ ++SGK D SNL++FGC A+ H + KLEPR+ K FLG
Sbjct: 354 TIAYLINRSPSSTLGFKTPQELWSGKPPDLSNLRIFGCPAYAHIKQGKLEPRAVKGYFLG 413
Query: 653 YPEGVKGYRLW-LRGEPGFKAITSRDVIFNESDFPCLSATMPLPESEPAPNKVEQLLGLS 477
YPEG+KG+++W L G+P + + +RDV F+E +KVE + +
Sbjct: 414 YPEGIKGFKIWTLNGKPS-RILITRDVTFDEEQM--------------LQSKVEIEIEAT 458
Query: 476 HIDETENLHVXXXXXXXXXXXXXXXXXNMPENVDNAEMHDDLVDLNDNE--PEELGNYQL 303
I+E E+ E+ D+ + + D + P EL YQL
Sbjct: 459 EIEEEESA------------------GQKVEHSDSCKTSEQPSDQSKERKNPSELETYQL 500
Query: 302 ARDRTRRNIRQPTRFDDFQMISYVFSVFESIDNCEPKTYQDALKSEHSQEWLNAMHEEMN 123
ARDR RR I+ P + +ISY +V + ++ EP +Y++A+ +W AM +E+
Sbjct: 501 ARDRERRAIKMPKKHSTADLISYALTVADEVNGGEPLSYKEAMCCSDKLKWYAAMQDEII 560
Query: 122 SLHVNNTWILVPKPENCSLVDCKWLFKVK---NENDSVRYKA 6
SL NNTWILV KP N LV KW+FK+K +EN+ R+KA
Sbjct: 561 SLKKNNTWILVNKPLNKKLVGSKWIFKLKAGASENEPPRHKA 602
>gb|KZV37190.1| hypothetical protein F511_15110 [Dorcoceras hygrometricum]
Length = 354
Score = 169 bits (429), Expect = 6e-47
Identities = 104/270 (38%), Positives = 142/270 (52%), Gaps = 3/270 (1%)
Frame = -3
Query: 833 TAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLG 654
TAAY+INR PS ++ K ++G+ NL+VFGC A+ H + KLE R+ +CVFLG
Sbjct: 109 TAAYIINRCPSTAIELKTHVHKWNGEPQTLDNLRVFGCEAYAHVKQGKLEARAVRCVFLG 168
Query: 653 YPEGVKGYRLWLRGEPG-FKAITSRDVIFNESDFPCLSATMPLPESEPAPNKVEQLLGLS 477
YPEGVKGY+LW EPG K I SRDV FNE FP PN + +G S
Sbjct: 169 YPEGVKGYKLWCI-EPGQKKTIISRDVTFNEIVFPL------------KPNFSDTYIGDS 215
Query: 476 HIDETENLHVXXXXXXXXXXXXXXXXXNMPENVDNAE--MHDDLVDLNDNEPEELGNYQL 303
++ +T V +P N E +L + E + +YQL
Sbjct: 216 NL-KTSTTRV---------------EVELPVNQSETEGGAQSELSGHDTEEETGVDDYQL 259
Query: 302 ARDRTRRNIRQPTRFDDFQMISYVFSVFESIDNCEPKTYQDALKSEHSQEWLNAMHEEMN 123
RDR RR + R+ +I++ +V +D EP T +AL S+ ++W AM EEMN
Sbjct: 260 TRDRQRRAAKPTQRYGYADLITFALNVASDVDKEEPATVSEALNSQEREKWQRAMEEEMN 319
Query: 122 SLHVNNTWILVPKPENCSLVDCKWLFKVKN 33
SL N TW LVPKP + ++ CKW+FK K+
Sbjct: 320 SLMKNRTWELVPKPVDQRVIGCKWIFKKKD 349
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 178 bits (451), Expect = 7e-47
Identities = 111/290 (38%), Positives = 158/290 (54%), Gaps = 13/290 (4%)
Frame = -3
Query: 833 TAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQRGDKLEPRSKKCVFLG 654
TA YLINRSPS+PL K P V+SG D+S LKVFGC A+ H KLEPR+ KC+FLG
Sbjct: 619 TACYLINRSPSIPLNKKTPIEVWSGMPADYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLG 678
Query: 653 YPEGVKGYRLWLRGEPGFKAITSRDVIFNESDFPCLSATMPLPESEPAPNKVEQLLGL-- 480
Y GVKGY+LW E G K SR V+FNES + T LP SE P K Q + +
Sbjct: 679 YGSGVKGYKLW-NPETG-KTFMSRSVVFNES----VMFTNSLP-SEHVPEKELQRMHMQV 731
Query: 479 SHIDETENLHVXXXXXXXXXXXXXXXXXNMPENVDNAEMHDD------LVDLNDNEPEEL 318
H+D+ + V +V + + HDD ++ L + P
Sbjct: 732 EHVDDDTGVQVEPVHEQDDHN----------NDVADDDAHDDVQQTPPILQLEEELP--- 778
Query: 317 GNYQLARDRTRRNIRQPTR-FDDFQMISYVFSVFESIDNC-EPKTYQDALKSEHSQEWLN 144
+A+ +++R + P R ++ + Y S E ++N EP TY++A++ S+ W++
Sbjct: 779 ----IAQRKSKRTTKPPKRLIEECNLSYYALSCAEQVENVHEPATYKEAVRCGDSENWIS 834
Query: 143 AMHEEMNSLHVNNTWILVPKPENCSLVDCKWLFKVK---NENDSVRYKAR 3
AMHEEM SL N+TW +VP P+ + CKW+FK K + ++ +YKAR
Sbjct: 835 AMHEEMQSLEKNSTWEVVPLPKKKKTISCKWIFKRKEGLSSSEPPKYKAR 884