BLASTX nr result

ID: Rehmannia32_contig00008637 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00008637
         (389 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011080479.1| UBP1-associated protein 2A-like [Sesamum ind...    65   9e-10
gb|PIM97329.1| RNA-binding protein musashi/mRNA cleavage and pol...    64   4e-09
gb|EYU46155.1| hypothetical protein MIMGU_mgv1a006683mg [Erythra...    62   2e-08
ref|XP_012851882.1| PREDICTED: UBP1-associated protein 2B-like [...    62   2e-08
ref|XP_012838451.1| PREDICTED: UBP1-associated protein 2A-like [...    59   1e-07

>ref|XP_011080479.1| UBP1-associated protein 2A-like [Sesamum indicum]
 ref|XP_011080482.1| UBP1-associated protein 2A-like [Sesamum indicum]
          Length = 515

 Score = 65.5 bits (158), Expect = 9e-10
 Identities = 48/139 (34%), Positives = 52/139 (37%), Gaps = 10/139 (7%)
 Frame = +2

Query: 2   DGPKHTKGYFNXXXXXXXXXXXXXXXXXXXXT------AKKGRYSGSSDGGRPTGGHLMA 163
           DGPKH+KGYFN                           AKKGRY+GSS  G  TGGHLMA
Sbjct: 350 DGPKHSKGYFNQQHGQSQQQQHQHQHHHQGNQGYYHHPAKKGRYAGSSGVGH-TGGHLMA 408

Query: 164 PNAGP----VGYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQGVPPMMNN 331
           P+AGP    VG+N                                     PQGVPPMMNN
Sbjct: 409 PSAGPAVPSVGFNPAVAPAAIGQAVAALLATQGAGLGIGNLLGGIGAGVNPQGVPPMMNN 468

Query: 332 XXXXXXXXXXXXXXXPGMQ 388
                          PGMQ
Sbjct: 469 AGYGGQGGAGGYGGQPGMQ 487


>gb|PIM97329.1| RNA-binding protein musashi/mRNA cleavage and polyadenylation
           factor I complex, subunit HRP1 [Handroanthus
           impetiginosus]
          Length = 522

 Score = 63.5 bits (153), Expect = 4e-09
 Identities = 48/140 (34%), Positives = 51/140 (36%), Gaps = 11/140 (7%)
 Frame = +2

Query: 2   DGPKHTKGYFNXXXXXXXXXXXXXXXXXXXX-------TAKKGRYSGSSDGGRPTGGHLM 160
           DGPKH+KGYFN                            AKKGRY+GSS  G  TGGHLM
Sbjct: 356 DGPKHSKGYFNQQHGQSQSQQQQQHQHHQQGHQGYYHHPAKKGRYAGSSGVGH-TGGHLM 414

Query: 161 APNAGP----VGYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQGVPPMMN 328
           AP+AGP    VG N                                     PQGVPPMMN
Sbjct: 415 APSAGPAAPSVGLNPAVAPAAIGQAVAALLATQGAGLGIGNLLGGIGGGVNPQGVPPMMN 474

Query: 329 NXXXXXXXXXXXXXXXPGMQ 388
           N               PGMQ
Sbjct: 475 NAGYGAQGGAGGYGGQPGMQ 494


>gb|EYU46155.1| hypothetical protein MIMGU_mgv1a006683mg [Erythranthe guttata]
 gb|EYU46156.1| hypothetical protein MIMGU_mgv1a006683mg [Erythranthe guttata]
          Length = 435

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 45/136 (33%), Positives = 51/136 (37%), Gaps = 7/136 (5%)
 Frame = +2

Query: 2   DGPKHTKGYFNXXXXXXXXXXXXXXXXXXXX---TAKKGRYSGSSDGGRPTGGHLMAPNA 172
           DGPKH+KG+FN                        AKKGRY+GSS  G  TGGHLMAP+A
Sbjct: 273 DGPKHSKGHFNQQHGQSQQQPQQHHHQGHQGYYPPAKKGRYAGSSGAGH-TGGHLMAPSA 331

Query: 173 GP----VGYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQGVPPMMNNXXX 340
           GP    +G+N                                      QGVPPMMNN   
Sbjct: 332 GPAVPQMGFNPAVAPAAIGQAVAAILATQGAGLGIGNLLGGIGAGVNQQGVPPMMNNAGY 391

Query: 341 XXXXXXXXXXXXPGMQ 388
                       PGMQ
Sbjct: 392 GGQVGAGGYGGQPGMQ 407


>ref|XP_012851882.1| PREDICTED: UBP1-associated protein 2B-like [Erythranthe guttata]
 ref|XP_012851949.1| PREDICTED: UBP1-associated protein 2B-like [Erythranthe guttata]
 ref|XP_012852026.1| PREDICTED: UBP1-associated protein 2B-like [Erythranthe guttata]
 ref|XP_012852102.1| PREDICTED: UBP1-associated protein 2B-like [Erythranthe guttata]
 ref|XP_012852181.1| PREDICTED: UBP1-associated protein 2B-like [Erythranthe guttata]
          Length = 509

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 45/136 (33%), Positives = 51/136 (37%), Gaps = 7/136 (5%)
 Frame = +2

Query: 2   DGPKHTKGYFNXXXXXXXXXXXXXXXXXXXX---TAKKGRYSGSSDGGRPTGGHLMAPNA 172
           DGPKH+KG+FN                        AKKGRY+GSS  G  TGGHLMAP+A
Sbjct: 347 DGPKHSKGHFNQQHGQSQQQPQQHHHQGHQGYYPPAKKGRYAGSSGAGH-TGGHLMAPSA 405

Query: 173 GP----VGYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPQGVPPMMNNXXX 340
           GP    +G+N                                      QGVPPMMNN   
Sbjct: 406 GPAVPQMGFNPAVAPAAIGQAVAAILATQGAGLGIGNLLGGIGAGVNQQGVPPMMNNAGY 465

Query: 341 XXXXXXXXXXXXPGMQ 388
                       PGMQ
Sbjct: 466 GGQVGAGGYGGQPGMQ 481


>ref|XP_012838451.1| PREDICTED: UBP1-associated protein 2A-like [Erythranthe guttata]
 ref|XP_012838452.1| PREDICTED: UBP1-associated protein 2A-like [Erythranthe guttata]
 gb|EYU35971.1| hypothetical protein MIMGU_mgv1a004343mg [Erythranthe guttata]
 gb|EYU35972.1| hypothetical protein MIMGU_mgv1a004343mg [Erythranthe guttata]
          Length = 532

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 33/69 (47%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
 Frame = +2

Query: 2   DGPKHTKGYFNXXXXXXXXXXXXXXXXXXXX-TAKKGRYSGSSDGGRPTGGHLMAPNAG- 175
           DGPKH+KG+FN                     TAKKGRYSGSS+G   TGGHLMAP+ G 
Sbjct: 374 DGPKHSKGFFNQQQSQPNQQHQEGGNQGYYGHTAKKGRYSGSSEGVGHTGGHLMAPSGGG 433

Query: 176 ----PVGYN 190
               P+G+N
Sbjct: 434 SAMPPMGFN 442


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