BLASTX nr result

ID: Rehmannia32_contig00008102 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00008102
         (456 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN22940.1| hypothetical protein CDL12_04349 [Handroanthus im...    56   1e-06

>gb|PIN22940.1| hypothetical protein CDL12_04349 [Handroanthus impetiginosus]
          Length = 192

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
 Frame = -1

Query: 453 EKQQQNDTWYSKNGYSGYGKLKNGNKYSD-SMSPDVETGYGAHQGSRMSMDKPGPVYSEQ 277
           E ++  +TW   N + G GK ++ N+Y   S   +   GYG HQG    M +  P Y   
Sbjct: 121 EDEEDYNTWNGVNDHFGLGKHQDANRYPGMSYGLEKSWGYGVHQGPHKPMVELRPYYI-- 178

Query: 276 NKAPPVWCAKGIVD 235
           + APPVWCAKG+ D
Sbjct: 179 SAAPPVWCAKGVKD 192