BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00007641
         (1334 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA69272.1| lectin receptor kinase, partial [Arabidopsis tha...   496   e-168
emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]   504   e-162
gb|KYP38573.1| Retrovirus-related Pol polyprotein from transposo...   493   e-161
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A...   496   e-161
gb|AIC77183.1| polyprotein [Gossypium barbadense]                     498   e-161
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         495   e-159
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   495   e-159
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   494   e-159
gb|KYP66219.1| Retrovirus-related Pol polyprotein from transposo...   482   e-158
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   487   e-157
ref|XP_013583262.1| PREDICTED: LOW QUALITY PROTEIN: copia protei...   483   e-156
gb|ABA95820.1| retrotransposon protein, putative, unclassified [...   481   e-156
gb|PHT36714.1| hypothetical protein CQW23_24414 [Capsicum baccatum]   486   e-156
gb|KYP43625.1| Retrovirus-related Pol polyprotein from transposo...   462   e-148
ref|XP_020867873.1| uncharacterized protein LOC110224828 [Arabid...   444   e-144
gb|KYP55941.1| Retrovirus-related Pol polyprotein from transposo...   429   e-141
gb|PNY02378.1| putative copia-like retrotransposable element [Tr...   433   e-139
emb|CAN68235.1| hypothetical protein VITISV_037104 [Vitis vinifera]   446   e-138
gb|KYP60991.1| Retrovirus-related Pol polyprotein from transposo...   413   e-136
gb|PNX89974.1| copia-type polyprotein, partial [Trifolium pratense]   397   e-132

>emb|CAA69272.1| lectin receptor kinase, partial [Arabidopsis thaliana]
          Length = 623

 Score =  496 bits (1277), Expect = e-168
 Identities = 246/453 (54%), Positives = 312/453 (68%), Gaps = 9/453 (1%)
 Frame = -1

Query: 1334 LNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLRTDRGGEFI 1155
            L  + YFLLF+DDFSR  WVY LK+KSE F  F +FK +VE +SG  IKT+R+D GGEF 
Sbjct: 40   LGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDSGGEFT 99

Query: 1154 GKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKIFWAEAVNA 975
             K FL YC+D GI RQLTV  SPQQNGVAERKNRTI+EMARSM+  K LPK  WAEAV  
Sbjct: 100  SKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVAC 159

Query: 974  AIYILNRSPTKAVQNKTPYEAWHQRKPQVNHLKVFGYIAYSHIPSQQREKFDEKGEKMIF 795
            A+Y+LNRSPTK+V  KTP EAW  RKP V+HL+VFG IA++H+P ++R K D+K EK IF
Sbjct: 160  AVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLDDKSEKYIF 219

Query: 794  VGYSDESKGYRLLNPKTNKLIISRDVIFDKMQSWNWNENEK-MKKIVHLPGTLPISTSHG 618
            +GY + SKGY+L NP T K IISR+++FD+   W+WN NE+      H     P  T   
Sbjct: 220  IGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDKPEPT--- 276

Query: 617  DQXXXXXXXXXXXXXXXXXXXXXXXXXXPIRRVRSLREIYE--------TCDVAFFACEP 462
             +                             R RS++E+YE        T    F  CEP
Sbjct: 277  -REEPPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAECEP 335

Query: 461  QNYEEAAKEEVWQIAMDEEIASIEKNNTWELVDLPEGKSVIGVKWIYKTKYKEDGSIHKH 282
             +++EA +++ W+ AMDEEI SI+KN+TWEL  LP G   IGVKW+YK K    G + ++
Sbjct: 336  MDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERY 395

Query: 281  KARLVAKGYSQQPGVDFNETFAPVARMETIRIVLAIAAQFELPVYQMDVKSAFLNGDLEE 102
            KARLVAKGYSQ+ G+D++E FAPVAR+ET+R+++++AAQ +  ++QMDVKSAFLNGDLEE
Sbjct: 396  KARLVAKGYSQRAGIDYDEIFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEE 455

Query: 101  EVYVEQPEDYIANGDEDKVYRLRKALYGLKQAP 3
            EVY+EQP+ YI  G+EDKV RL+K LYGLKQAP
Sbjct: 456  EVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAP 488


>emb|CAN79061.1| hypothetical protein VITISV_024577 [Vitis vinifera]
          Length = 1424

 Score =  504 bits (1298), Expect = e-162
 Identities = 249/455 (54%), Positives = 325/455 (71%), Gaps = 13/455 (2%)
 Frame = -1

Query: 1328 DNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLRTDRGGEFIGK 1149
            +N+YF+LF+DDF+RM WV+ +KQKSE F  F +FK +VE QSG  IKTLR+DRG E+   
Sbjct: 610  NNKYFVLFIDDFTRMTWVFFMKQKSEVFSIFKKFKSFVEKQSGCYIKTLRSDRGMEYTSS 669

Query: 1148 SFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKIFWAEAVNAAI 969
             F ++C+D+G+ RQLTV Y+PQQNGV ERKN+T++EMA++M+  KGLPKIFWAEAVN A+
Sbjct: 670  QFGNFCEDEGVERQLTVAYTPQQNGVVERKNQTVMEMAKAMLYEKGLPKIFWAEAVNTAV 729

Query: 968  YILNRSPTKAVQNKTPYEAWHQRKPQVNHLKVFGYIAYSHIPSQQREKFDEKGEKMIFVG 789
            Y+LNR PTKA+ NKTP EAW  RKP V H KVFG + YS +P Q+R K DE  EK IF+G
Sbjct: 730  YLLNRCPTKALLNKTPIEAWSGRKPSVRHFKVFGCLCYSQVPKQRRSKLDETSEKCIFMG 789

Query: 788  YSDESKGYRLLNPKTNKLIISRDVIFDKMQSWNWNENEKMKKIV---HLPGTLPISTSHG 618
            YS +SKGYRL N KT KLIISRDVIFD+  +WNW E + +KK +    L    P+ T +G
Sbjct: 790  YSSQSKGYRLYNLKTXKLIISRDVIFDEKVAWNWEEGKILKKTILVDELQTKAPVETGNG 849

Query: 617  ----DQXXXXXXXXXXXXXXXXXXXXXXXXXXPIRRVRSLREIYETCDVAFFACEPQNYE 450
                                              R++RSL ++YE C++     EPQ++E
Sbjct: 850  STSTSSPQESPRSVPLSPSIESPTSXSSSPSSTPRKMRSLTDVYERCNLCI--VEPQSFE 907

Query: 449  EAAKEEVWQIAMDEEIASIEKNNTWELVDLPEGKSVIGVKWIYKT------KYKEDGSIH 288
            EA K+E W+ AM++EI  IEKN TW+LV+ P+ K +IGVKWI++       KY  DG + 
Sbjct: 908  EAIKDEDWRKAMEKEIDVIEKNETWQLVEKPKDKEIIGVKWIFRVKWIFRXKYHSDGRVQ 967

Query: 287  KHKARLVAKGYSQQPGVDFNETFAPVARMETIRIVLAIAAQFELPVYQMDVKSAFLNGDL 108
            + KARLVAKGYSQQPG DF+ETFAPVAR++TIR ++A+AAQ    +YQ+D+KSAFLNG L
Sbjct: 968  RLKARLVAKGYSQQPGXDFHETFAPVARLDTIRTIIAVAAQKGWLLYQLDIKSAFLNGKL 1027

Query: 107  EEEVYVEQPEDYIANGDEDKVYRLRKALYGLKQAP 3
            E E+YVEQP+ ++ +G+E+KVY+L+KALYGLKQAP
Sbjct: 1028 EXEIYVEQPQGFVVDGEENKVYKLKKALYGLKQAP 1062


>gb|KYP38573.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial
            [Cajanus cajan]
          Length = 1120

 Score =  493 bits (1268), Expect = e-161
 Identities = 247/442 (55%), Positives = 308/442 (69%)
 Frame = -1

Query: 1328 DNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLRTDRGGEFIGK 1149
            +NRYF+LF+ DFSRM WVY LK KSE F  F +FK  VE QSG++IK LR+DRG E+   
Sbjct: 444  NNRYFILFIYDFSRMTWVYFLKTKSEVFGIFKKFKALVEKQSGKQIKVLRSDRGKEYTSC 503

Query: 1148 SFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKIFWAEAVNAAI 969
             F  +C+D+GI RQLTV Y+PQQNGV ERKNR ++EM RSM+  KGLP IFWAEAV   +
Sbjct: 504  EFDKFCEDEGIERQLTVAYTPQQNGVLERKNRIVMEMERSMLKEKGLPNIFWAEAVYTVV 563

Query: 968  YILNRSPTKAVQNKTPYEAWHQRKPQVNHLKVFGYIAYSHIPSQQREKFDEKGEKMIFVG 789
            Y+LNR PT A +  TP E+    KP   HL+VFG I Y H+P ++R K ++K  + IF+G
Sbjct: 564  YLLNRFPTNAFRENTPIESCSGNKPATKHLRVFGSICYIHVPDEKRHKLEDKTVRGIFLG 623

Query: 788  YSDESKGYRLLNPKTNKLIISRDVIFDKMQSWNWNENEKMKKIVHLPGTLPISTSHGDQX 609
            YS +SKGYR+ N +T KL ISRD+  D+  +WNW E    KK +++P   P ++S  D  
Sbjct: 624  YSSQSKGYRVYNLQTKKLTISRDIEVDENATWNWEEKRIEKKTIYMPINQPTTSSLEDNN 683

Query: 608  XXXXXXXXXXXXXXXXXXXXXXXXXPIRRVRSLREIYETCDVAFFACEPQNYEEAAKEEV 429
                                       RRVRSL +IYETC++A    EP ++EEAA +EV
Sbjct: 684  QDIVISPESPRIVPQQEESSPESTP--RRVRSLVDIYETCNLAIL--EPGSFEEAANQEV 739

Query: 428  WQIAMDEEIASIEKNNTWELVDLPEGKSVIGVKWIYKTKYKEDGSIHKHKARLVAKGYSQ 249
            W  AM+EEI  IEKNNTWELVD P GK +IGVKW+YKTK   DG+I KHKARLVAKGYSQ
Sbjct: 740  WVKAMEEEIKMIEKNNTWELVDFPHGKDIIGVKWVYKTKLNPDGTIQKHKARLVAKGYSQ 799

Query: 248  QPGVDFNETFAPVARMETIRIVLAIAAQFELPVYQMDVKSAFLNGDLEEEVYVEQPEDYI 69
            +PGVD+NETFAPVAR++TIR ++A+AA     +YQ+DVKSAFLNG LEEE+YVEQP  ++
Sbjct: 800  KPGVDYNETFAPVARLDTIRTLIALAAHKGWNIYQLDVKSAFLNGVLEEEIYVEQPPGFV 859

Query: 68   ANGDEDKVYRLRKALYGLKQAP 3
              G E KV RL+KALYGLKQAP
Sbjct: 860  MKGHEGKVLRLKKALYGLKQAP 881


>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
          Length = 1272

 Score =  496 bits (1277), Expect = e-161
 Identities = 246/453 (54%), Positives = 312/453 (68%), Gaps = 9/453 (1%)
 Frame = -1

Query: 1334 LNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLRTDRGGEFI 1155
            L  + YFLLF+DDFSR  WVY LK+KSE F  F +FK +VE +SG  IKT+R+D GGEF 
Sbjct: 543  LGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDSGGEFT 602

Query: 1154 GKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKIFWAEAVNA 975
             K FL YC+D GI RQLTV  SPQQNGVAERKNRTI+EMARSM+  K LPK  WAEAV  
Sbjct: 603  SKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVAC 662

Query: 974  AIYILNRSPTKAVQNKTPYEAWHQRKPQVNHLKVFGYIAYSHIPSQQREKFDEKGEKMIF 795
            A+Y+LNRSPTK+V  KTP EAW  RKP V+HL+VFG IA++H+P ++R K D+K EK IF
Sbjct: 663  AVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLDDKSEKYIF 722

Query: 794  VGYSDESKGYRLLNPKTNKLIISRDVIFDKMQSWNWNENEK-MKKIVHLPGTLPISTSHG 618
            +GY + SKGY+L NP T K IISR+++FD+   W+WN NE+      H     P  T   
Sbjct: 723  IGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDKPEPT--- 779

Query: 617  DQXXXXXXXXXXXXXXXXXXXXXXXXXXPIRRVRSLREIYE--------TCDVAFFACEP 462
             +                             R RS++E+YE        T    F  CEP
Sbjct: 780  -REEPPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAECEP 838

Query: 461  QNYEEAAKEEVWQIAMDEEIASIEKNNTWELVDLPEGKSVIGVKWIYKTKYKEDGSIHKH 282
             +++EA +++ W+ AMDEEI SI+KN+TWEL  LP G   IGVKW+YK K    G + ++
Sbjct: 839  MDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERY 898

Query: 281  KARLVAKGYSQQPGVDFNETFAPVARMETIRIVLAIAAQFELPVYQMDVKSAFLNGDLEE 102
            KARLVAKGYSQ+ G+D++E FAPVAR+ET+R+++++AAQ +  ++QMDVKSAFLNGDLEE
Sbjct: 899  KARLVAKGYSQRAGIDYDEIFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEE 958

Query: 101  EVYVEQPEDYIANGDEDKVYRLRKALYGLKQAP 3
            EVY+EQP+ YI  G+EDKV RL+K LYGLKQAP
Sbjct: 959  EVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAP 991


>gb|AIC77183.1| polyprotein [Gossypium barbadense]
          Length = 1369

 Score =  498 bits (1282), Expect = e-161
 Identities = 251/455 (55%), Positives = 311/455 (68%), Gaps = 11/455 (2%)
 Frame = -1

Query: 1334 LNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLRTDRGGEFI 1155
            L  NRY+L F+DD+SR  WVY LK KSEA  KF EFK  VE QSGR +K LR+DRGGE+ 
Sbjct: 560  LGGNRYYLTFIDDYSRKCWVYFLKAKSEALEKFKEFKAMVEKQSGRYLKILRSDRGGEYT 619

Query: 1154 GKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKIFWAEAVNA 975
             K +  +CKD GI  QLT R +PQQNGVAERKNRTI++MARSM+ GK LP+ FWAEAV  
Sbjct: 620  AKLYESFCKDHGIIHQLTARRTPQQNGVAERKNRTILDMARSMIKGKHLPRTFWAEAVEC 679

Query: 974  AIYILNRSPTKAVQNKTPYEAWHQRKPQVNHLKVFGYIAYSHIPSQQREKFDEKGEKMIF 795
            A+Y+LN+ PTK+V++KTP EAW   KP+V HLK+FG IAY+H+P QQR+K D++GEK IF
Sbjct: 680  AVYLLNQCPTKSVRHKTPEEAWSGHKPRVGHLKIFGCIAYAHVPEQQRKKLDDRGEKCIF 739

Query: 794  VGYSDESKGYRLLNPKTNKLIISRDVIFDKMQSWNWNENEKMKKIVHLPGTLPISTSHGD 615
            +GY   SK YRL NP T KLIISRDV FD+   W W+E EK  + +            GD
Sbjct: 740  IGYDKRSKAYRLYNPLTKKLIISRDVEFDEADYWRWSEEEKKVEGLFFNEDDNNQEEQGD 799

Query: 614  QXXXXXXXXXXXXXXXXXXXXXXXXXXPIRRVRSLREIYETC-------DVAFFA----C 468
                                          R RSL +IY +        D + F     C
Sbjct: 800  DQSPGTTAPSSPTSSSGSSSLDEAP----TRTRSLNDIYNSTEPVETQFDYSLFCLMTEC 855

Query: 467  EPQNYEEAAKEEVWQIAMDEEIASIEKNNTWELVDLPEGKSVIGVKWIYKTKYKEDGSIH 288
            +P  YEEA +   W+ AMDEEIA+I +N+TWEL  LPEG S IGVKW+YKTK  ++G + 
Sbjct: 856  DPVTYEEAIENNKWKKAMDEEIAAIRRNDTWELTSLPEGHSPIGVKWVYKTKTNKEGKVE 915

Query: 287  KHKARLVAKGYSQQPGVDFNETFAPVARMETIRIVLAIAAQFELPVYQMDVKSAFLNGDL 108
            K+KARLVAKGY Q+ GVD++E FAPVAR++TIR+++A+AAQ++  +YQMDVKSAFLNG L
Sbjct: 916  KYKARLVAKGYKQRQGVDYDEIFAPVARIDTIRLLIAVAAQYKWKIYQMDVKSAFLNGYL 975

Query: 107  EEEVYVEQPEDYIANGDEDKVYRLRKALYGLKQAP 3
            EEEVY+EQP  Y   G EDKVYRL+K+LYGLKQAP
Sbjct: 976  EEEVYIEQPPGYSIQGKEDKVYRLKKSLYGLKQAP 1010


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  495 bits (1274), Expect = e-159
 Identities = 245/453 (54%), Positives = 312/453 (68%), Gaps = 9/453 (1%)
 Frame = -1

Query: 1334 LNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLRTDRGGEFI 1155
            L  + YFLLF+DDFSR  WVY LK+KSE F  F +FK +VE +SG  IKT+R+DRGGEF 
Sbjct: 543  LGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFT 602

Query: 1154 GKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKIFWAEAVNA 975
             K FL YC+D GI RQLTV  SPQQNGV ERKNRTI+EMARSM+  K LPK  WAEAV  
Sbjct: 603  SKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAEAVAC 662

Query: 974  AIYILNRSPTKAVQNKTPYEAWHQRKPQVNHLKVFGYIAYSHIPSQQREKFDEKGEKMIF 795
            A+Y+LNRSPTK+V  KTP EAW  RKP V+HL+VFG IA++H+P ++R K D+K EK IF
Sbjct: 663  AVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIF 722

Query: 794  VGYSDESKGYRLLNPKTNKLIISRDVIFDKMQSWNWNENEK-MKKIVHLPGTLPISTSHG 618
            +GY + SKGY+L NP T K IISR+++FD+   W+WN NE+      H     P  T   
Sbjct: 723  IGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPT--- 779

Query: 617  DQXXXXXXXXXXXXXXXXXXXXXXXXXXPIRRVRSLREIYE--------TCDVAFFACEP 462
             +                             R RS++E+YE        T    F  CEP
Sbjct: 780  -REEPPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAECEP 838

Query: 461  QNYEEAAKEEVWQIAMDEEIASIEKNNTWELVDLPEGKSVIGVKWIYKTKYKEDGSIHKH 282
             ++++A +++ W+ AMDEEI SI+KN+TWEL  LP G   IGVKW+YK K    G + ++
Sbjct: 839  MDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERY 898

Query: 281  KARLVAKGYSQQPGVDFNETFAPVARMETIRIVLAIAAQFELPVYQMDVKSAFLNGDLEE 102
            KARLVAKGYSQ+ G+D++E FAPVAR+ET+R+++++AAQ +  ++QMDVKSAFLNGDLEE
Sbjct: 899  KARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEE 958

Query: 101  EVYVEQPEDYIANGDEDKVYRLRKALYGLKQAP 3
            EVY+EQP+ YI  G+EDKV RL+K LYGLKQAP
Sbjct: 959  EVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAP 991


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  495 bits (1274), Expect = e-159
 Identities = 245/453 (54%), Positives = 312/453 (68%), Gaps = 9/453 (1%)
 Frame = -1

Query: 1334 LNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLRTDRGGEFI 1155
            L  + YFLLF+DDFSR  WVY LK+KSE F  F +FK +VE +SG  IKT+R+DRGGEF 
Sbjct: 543  LGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFT 602

Query: 1154 GKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKIFWAEAVNA 975
             K FL YC+D GI RQLTV  SPQQNGV ERKNRTI+EMARSM+  K LPK  WAEAV  
Sbjct: 603  SKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAEAVAC 662

Query: 974  AIYILNRSPTKAVQNKTPYEAWHQRKPQVNHLKVFGYIAYSHIPSQQREKFDEKGEKMIF 795
            A+Y+LNRSPTK+V  KTP EAW  RKP V+HL+VFG IA++H+P ++R K D+K EK IF
Sbjct: 663  AVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIF 722

Query: 794  VGYSDESKGYRLLNPKTNKLIISRDVIFDKMQSWNWNENEK-MKKIVHLPGTLPISTSHG 618
            +GY + SKGY+L NP T K IISR+++FD+   W+WN NE+      H     P  T   
Sbjct: 723  IGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPT--- 779

Query: 617  DQXXXXXXXXXXXXXXXXXXXXXXXXXXPIRRVRSLREIYE--------TCDVAFFACEP 462
             +                             R RS++E+YE        T    F  CEP
Sbjct: 780  -REEPPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAECEP 838

Query: 461  QNYEEAAKEEVWQIAMDEEIASIEKNNTWELVDLPEGKSVIGVKWIYKTKYKEDGSIHKH 282
             ++++A +++ W+ AMDEEI SI+KN+TWEL  LP G   IGVKW+YK K    G + ++
Sbjct: 839  MDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERY 898

Query: 281  KARLVAKGYSQQPGVDFNETFAPVARMETIRIVLAIAAQFELPVYQMDVKSAFLNGDLEE 102
            KARLVAKGYSQ+ G+D++E FAPVAR+ET+R+++++AAQ +  ++QMDVKSAFLNGDLEE
Sbjct: 899  KARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEE 958

Query: 101  EVYVEQPEDYIANGDEDKVYRLRKALYGLKQAP 3
            EVY+EQP+ YI  G+EDKV RL+K LYGLKQAP
Sbjct: 959  EVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAP 991


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  494 bits (1273), Expect = e-159
 Identities = 246/453 (54%), Positives = 312/453 (68%), Gaps = 9/453 (1%)
 Frame = -1

Query: 1334 LNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLRTDRGGEFI 1155
            L  + YFLLF+DDFSR  WVY LK+KSE F  F +FK +VE +SG  IKT+R+DRGGEF 
Sbjct: 543  LGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFT 602

Query: 1154 GKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKIFWAEAVNA 975
             K FL YC+D GI RQLTV  SPQQNGVAERKNRTI+EMARSM+  K LPK  WAEAV  
Sbjct: 603  SKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVAC 662

Query: 974  AIYILNRSPTKAVQNKTPYEAWHQRKPQVNHLKVFGYIAYSHIPSQQREKFDEKGEKMIF 795
            A+Y+LNRSPTK+V  KTP EAW  RK  V+HL+VFG IA++H+P ++R K D+K EK IF
Sbjct: 663  AVYLLNRSPTKSVSGKTPQEAWSGRKSGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIF 722

Query: 794  VGYSDESKGYRLLNPKTNKLIISRDVIFDKMQSWNWNENEK-MKKIVHLPGTLPISTSHG 618
            +GY + SKGY+L NP T K IISR+++FD+   W+WN NE+      H     P  T   
Sbjct: 723  IGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPT--- 779

Query: 617  DQXXXXXXXXXXXXXXXXXXXXXXXXXXPIRRVRSLREIYE--------TCDVAFFACEP 462
             +                             R RS++E+YE        T    F  CEP
Sbjct: 780  -REEPPSEEPTTPPTSPTSSQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAECEP 838

Query: 461  QNYEEAAKEEVWQIAMDEEIASIEKNNTWELVDLPEGKSVIGVKWIYKTKYKEDGSIHKH 282
             +++EA +++ W+ AMDEEI SI+KN+TWEL  LP G   IGVKW+YK K    G + ++
Sbjct: 839  MDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKTIGVKWVYKAKKNSKGEVERY 898

Query: 281  KARLVAKGYSQQPGVDFNETFAPVARMETIRIVLAIAAQFELPVYQMDVKSAFLNGDLEE 102
            KARLVAKGY Q+ G+D++E FAPVAR+ET+R+++++AAQ +  ++QMDVKSAFLNGDLEE
Sbjct: 899  KARLVAKGYIQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEE 958

Query: 101  EVYVEQPEDYIANGDEDKVYRLRKALYGLKQAP 3
            EVY+EQP+ YI  G+EDKV RL+KALYGLKQAP
Sbjct: 959  EVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAP 991


>gb|KYP66219.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1033

 Score =  482 bits (1240), Expect = e-158
 Identities = 246/467 (52%), Positives = 313/467 (67%), Gaps = 23/467 (4%)
 Frame = -1

Query: 1334 LNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLRTDRGGEFI 1155
            L  + YFLLF+DDFSR  WVY LK+KSE F  F +FK +VE +SG  IK LR+DRGGEF 
Sbjct: 475  LGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKKFKAHVEKESGLLIKALRSDRGGEFT 534

Query: 1154 GKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKIFWAEAVNA 975
             K F  YC+D GI RQLTV  SPQQNGVAERKNRTI+EMARSM+  K LPK FWAEAV  
Sbjct: 535  SKEFQKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKKLPKEFWAEAVAC 594

Query: 974  AIYILNRSPTKAVQNKTPYEAWHQRKPQVNHLKVFGYIAYSHIPSQQREKFDEKGEKMIF 795
            A+Y+ NRSPT++V  KTP EAW  RKP ++HL+VFG IA+ H+P ++R K D+K EK IF
Sbjct: 595  AVYLTNRSPTRSVSGKTPQEAWSGRKPGISHLRVFGSIAHVHVPDEKRSKLDDKSEKYIF 654

Query: 794  VGYSDESKGYRLLNPKTNKLIISRDVIFDKMQSWNWNEN---------------EKMKKI 660
            +GY   SKGY+L NP + K IISR+V+FD+   W+W+ N               E+ ++ 
Sbjct: 655  IGYDANSKGYKLYNPDSRKTIISRNVVFDEEGEWDWSTNCEDHTFFPCVEEDDVEQQQQP 714

Query: 659  VHLPGTLPISTSHGDQXXXXXXXXXXXXXXXXXXXXXXXXXXPIRRVRSLREIYE----- 495
               P T P S +   Q                           + R RSL+EIYE     
Sbjct: 715  QETPTTPPTSPNTTLQ-------------------DYESSSERMPRFRSLQEIYEATENL 755

Query: 494  ---TCDVAFFACEPQNYEEAAKEEVWQIAMDEEIASIEKNNTWELVDLPEGKSVIGVKWI 324
               T    F  CEP N++EA  ++ W+ AMDEEI +I+KN+TWELV LP+  + IGVKW+
Sbjct: 756  DNVTLFCLFADCEPMNFQEAIGKKSWRNAMDEEIEAIKKNDTWELVSLPKEHTAIGVKWV 815

Query: 323  YKTKYKEDGSIHKHKARLVAKGYSQQPGVDFNETFAPVARMETIRIVLAIAAQFELPVYQ 144
            YK K    G + ++KARLVAKGYSQ+ G+D++E FAPVAR+ET+R+++++AAQ    ++Q
Sbjct: 816  YKAKKDSKGEVQRYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNNWKIHQ 875

Query: 143  MDVKSAFLNGDLEEEVYVEQPEDYIANGDEDKVYRLRKALYGLKQAP 3
            MDVKSAFLNG LEEEVY+EQP+ Y   G+EDKV RL+KALYGLKQAP
Sbjct: 876  MDVKSAFLNGVLEEEVYIEQPQGYEVKGEEDKVLRLKKALYGLKQAP 922


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
 gb|AAG50765.1|AC079131_10 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  487 bits (1254), Expect = e-157
 Identities = 242/445 (54%), Positives = 306/445 (68%), Gaps = 1/445 (0%)
 Frame = -1

Query: 1334 LNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLRTDRGGEFI 1155
            L  + YFLLF+DDFSR  WVY LK+KSE F  F +FK +VE +SG  IKT+R+DRGGEF 
Sbjct: 543  LGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFT 602

Query: 1154 GKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKIFWAEAVNA 975
             K FL YC+D GI RQLTV  SPQQNGVAERKNRTI+EMARSM+  K LPK  WAEAV  
Sbjct: 603  SKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVAC 662

Query: 974  AIYILNRSPTKAVQNKTPYEAWHQRKPQVNHLKVFGYIAYSHIPSQQREKFDEKGEKMIF 795
            A+Y+LNRSPTK+V  KTP EAW  RKP V+HL+VFG IA++H+P ++R K D+K EK IF
Sbjct: 663  AVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIF 722

Query: 794  VGYSDESKGYRLLNPKTNKLIISRDVIFDKMQSWNWNENEK-MKKIVHLPGTLPISTSHG 618
            +GY + SKGY+L NP T K IISR+++FD+   W+WN NE+      H     P  T   
Sbjct: 723  IGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDKPEPTREE 782

Query: 617  DQXXXXXXXXXXXXXXXXXXXXXXXXXXPIRRVRSLREIYETCDVAFFACEPQNYEEAAK 438
                                              +  +I E C       EP +++EA +
Sbjct: 783  PPSEEPTTPPTSP---------------------TSSQIEEKC-------EPMDFQEAIE 814

Query: 437  EEVWQIAMDEEIASIEKNNTWELVDLPEGKSVIGVKWIYKTKYKEDGSIHKHKARLVAKG 258
            ++ W+ AMDEEI SI+KN+TWEL  LP G   IGVKW+YK K    G + ++KARLVAKG
Sbjct: 815  KKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKG 874

Query: 257  YSQQPGVDFNETFAPVARMETIRIVLAIAAQFELPVYQMDVKSAFLNGDLEEEVYVEQPE 78
            YSQ+ G+D++E FAPVAR+ET+R+++++AAQ +  ++QMDVKSAFLNGDLEEEVY+EQP+
Sbjct: 875  YSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQ 934

Query: 77   DYIANGDEDKVYRLRKALYGLKQAP 3
             YI  G+EDKV RL+KALYGLKQAP
Sbjct: 935  GYIVKGEEDKVLRLKKALYGLKQAP 959


>ref|XP_013583262.1| PREDICTED: LOW QUALITY PROTEIN: copia protein [Brassica oleracea var.
            oleracea]
          Length = 1184

 Score =  483 bits (1242), Expect = e-156
 Identities = 245/460 (53%), Positives = 313/460 (68%), Gaps = 23/460 (5%)
 Frame = -1

Query: 1313 LLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLRTDRGGEFIGKSFLDY 1134
            +LF+DDFSR  WVY LKQKSE F  F +FK +VE +SG KIK++R+DRGGEF+ K F+ Y
Sbjct: 439  ILFIDDFSRKTWVYFLKQKSEVFENFKKFKTHVEKESGLKIKSMRSDRGGEFMSKEFMKY 498

Query: 1133 CKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKIFWAEAVNAAIYILNR 954
            C+D GI RQLTV  +PQQNGVAERKNRTI+EMARSM+  K LPK  WAEAV  A+YI NR
Sbjct: 499  CEDNGIRRQLTVPRTPQQNGVAERKNRTILEMARSMLKSKKLPKELWAEAVACAVYISNR 558

Query: 953  SPTKAVQNKTPYEAWHQRKPQVNHLKVFGYIAYSHIPSQQREKFDEKGEKMIFVGYSDES 774
            SPTK+V  KTP EA   RKP V+HL+VFG IA++H+P ++R K D+K EK IF+GY   S
Sbjct: 559  SPTKSVLEKTPQEAXSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDANS 618

Query: 773  KGYRLLNPKTNKLIISRDVIFDKMQSWNWNEN---------------EKMKKIVHLPGTL 639
            KGY+L NP+T K II+R+VIFD+   W+W  N               E+ ++    P T 
Sbjct: 619  KGYKLYNPETKKTIINRNVIFDEEGEWDWRSNNEDYNFFPSFEEDNVEQPREEPTTPPTS 678

Query: 638  PISTSHGDQXXXXXXXXXXXXXXXXXXXXXXXXXXPIRRVRSLREIYE--------TCDV 483
            P ++S GD+                             R RSL++IYE        T   
Sbjct: 679  PTTSSQGDESSSERTP----------------------RFRSLQDIYEVTENQDNLTLFC 716

Query: 482  AFFACEPQNYEEAAKEEVWQIAMDEEIASIEKNNTWELVDLPEGKSVIGVKWIYKTKYKE 303
             F  CEP N+EEA +++  + AMDEEI SI+KN+TW+L  LP G   IGVKW+YK K   
Sbjct: 717  LFADCEPMNFEEAKEKKSXRSAMDEEIKSIQKNDTWKLASLPNGHKAIGVKWVYKAKKNS 776

Query: 302  DGSIHKHKARLVAKGYSQQPGVDFNETFAPVARMETIRIVLAIAAQFELPVYQMDVKSAF 123
             G + ++KARLVAK YSQ+ G+D++E FAPVAR+ET+R+++++AAQ    ++QMDVKSAF
Sbjct: 777  KGEVERYKARLVAKCYSQRAGIDYDEVFAPVARLETVRLIISLAAQKSWRIHQMDVKSAF 836

Query: 122  LNGDLEEEVYVEQPEDYIANGDEDKVYRLRKALYGLKQAP 3
            LNGDLEEEVY+EQP+ YI  G+EDKV RL+KALYGLKQAP
Sbjct: 837  LNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAP 876


>gb|ABA95820.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1142

 Score =  481 bits (1239), Expect = e-156
 Identities = 245/464 (52%), Positives = 312/464 (67%), Gaps = 23/464 (4%)
 Frame = -1

Query: 1325 NRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLRTDRGGEFIGKS 1146
            N YF+ F+DD++RM+WVY LK+KS A   F +FK  VENQS RKIK LR+D+GGE+I K 
Sbjct: 326  NWYFITFIDDYTRMIWVYFLKEKSAALEIFKKFKAMVENQSNRKIKVLRSDQGGEYISKE 385

Query: 1145 FLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKIFWAEAVNAAIY 966
            F  YC++ GI RQLT  YS QQNGVAERKNRTI +MA SM+  KG+PK FWAEAVN AIY
Sbjct: 386  FEKYCENAGIRRQLTAGYSTQQNGVAERKNRTINDMANSMLQDKGMPKSFWAEAVNTAIY 445

Query: 965  ILNRSPTKAVQNKTPYEAWHQRKPQVNHLKVFGYIAYSHIPSQQREKFDEKGEKMIFVGY 786
            ILNRSPTKAV N+TP+EAW+ +KP + H++VFG I Y+ +P+Q+R KFD K ++ IFVGY
Sbjct: 446  ILNRSPTKAVPNRTPFEAWYGKKPVIGHMRVFGCICYAQVPAQKRVKFDNKSDRCIFVGY 505

Query: 785  SDESKGYRLLNPKTNKLIISRDVIFDKMQSWNWNENEKMKKIV-----------HLPGTL 639
            +D  KGYRL N +  K+II RDVIFD+  +WNW   E     +           H+ GT 
Sbjct: 506  ADGIKGYRLYNLEKKKIIIIRDVIFDESATWNWKSPEASSTPLLPTTTITLGQPHMHGTH 565

Query: 638  PIS--TSHGDQXXXXXXXXXXXXXXXXXXXXXXXXXXPIRRVRSLREIYETCD------- 486
             +   T                                 RRVRS+ E+ E+         
Sbjct: 566  EVEDHTPSPQPSSPMSSSSASSDSSPSSEEQISTPESAPRRVRSMVELLESTSQQRGSEQ 625

Query: 485  ---VAFFACEPQNYEEAAKEEVWQIAMDEEIASIEKNNTWELVDLPEGKSVIGVKWIYKT 315
                 +   EPQ+++EA K + W  AM++EI  IEKNNTWELVD P  + VIGVKW+YKT
Sbjct: 626  HEFCNYSVVEPQSFQEAEKHDNWIKAMEDEIHMIEKNNTWELVDRPRDREVIGVKWVYKT 685

Query: 314  KYKEDGSIHKHKARLVAKGYSQQPGVDFNETFAPVARMETIRIVLAIAAQFELPVYQMDV 135
            K   DGS+ K+KARLVAKG+ Q+PG+D+ ET+APVAR+ETIR ++A+AAQ    +YQ+DV
Sbjct: 686  KLNLDGSVQKYKARLVAKGFKQKPGIDYYETYAPVARLETIRTIIALAAQKRWKIYQLDV 745

Query: 134  KSAFLNGDLEEEVYVEQPEDYIANGDEDKVYRLRKALYGLKQAP 3
            KSAFLNG L+EE+YVEQPE +   G E+KV+RL+KALYGLKQAP
Sbjct: 746  KSAFLNGYLDEEIYVEQPEGFSVQGGENKVFRLKKALYGLKQAP 789


>gb|PHT36714.1| hypothetical protein CQW23_24414 [Capsicum baccatum]
          Length = 1427

 Score =  486 bits (1251), Expect = e-156
 Identities = 250/459 (54%), Positives = 311/459 (67%), Gaps = 15/459 (3%)
 Frame = -1

Query: 1334 LNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLRTDRGGEFI 1155
            L  NRY+L F+DDFSR  WVYILK+KSE   KF EFK  VE QSG  +K LR+DRGGE+ 
Sbjct: 859  LGGNRYYLTFIDDFSRRSWVYILKEKSETLDKFKEFKAMVEKQSGYYVKILRSDRGGEYT 918

Query: 1154 GKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKIFWAEAVNA 975
               F D+ K+ GI  QLTVRY+PQQNGVAERKNRTI+++ARSM+ GK LP+ FWAEAV  
Sbjct: 919  ANLFEDFVKEHGIIHQLTVRYTPQQNGVAERKNRTILDLARSMVKGKHLPRNFWAEAVRC 978

Query: 974  AIYILNRSPTKAVQNKTPYEAWHQRKPQVNHLKVFGYIAYSHIPSQQREKFDEKGEKMIF 795
            A+Y+LNR PTK+V+  TP EAW  +KP V HLK+FG IAYSH+P Q R+K D++GEK IF
Sbjct: 979  AVYLLNRCPTKSVRYMTPNEAWSGQKPGVGHLKIFGCIAYSHVPEQLRKKLDDRGEKCIF 1038

Query: 794  VGYSDESKGYRLLNPKTNKLIISRDVIFDKMQSWNWNENEKMKKIVHL----PGTLPIST 627
            +GY + SK YR  NP T K+IISRDV FD+   W W+E EK  + +           I  
Sbjct: 1039 IGYDERSKAYRFYNPLTKKVIISRDVEFDEADYWRWSEEEKKVEGLFFSDEEDDDFVIQN 1098

Query: 626  SHGDQXXXXXXXXXXXXXXXXXXXXXXXXXXPIRRVRSLREIYE-------TCDVAFFA- 471
              GD                           P  ++RSL EIYE       T D + F  
Sbjct: 1099 EEGDGQSPPESSGATNPSTSASPSSSSSSDAP-TKMRSLHEIYEDTEPIETTFDYSLFCL 1157

Query: 470  ---CEPQNYEEAAKEEVWQIAMDEEIASIEKNNTWELVDLPEGKSVIGVKWIYKTKYKED 300
               C+P  YEEA  +  W+ AMDEEIA+I +N+TWEL  +PEG + IGVKW+YKTK  ++
Sbjct: 1158 MAECDPVTYEEANVDVKWKKAMDEEIAAIRRNDTWELTSMPEGHNPIGVKWVYKTKTNKE 1217

Query: 299  GSIHKHKARLVAKGYSQQPGVDFNETFAPVARMETIRIVLAIAAQFELPVYQMDVKSAFL 120
            G + K+KARLVAKGY ++ GVD++E FAPVAR++T+R++ A+AAQ    +YQMDVKSAFL
Sbjct: 1218 GKVDKYKARLVAKGYKKKYGVDYDEVFAPVARIDTVRLLTALAAQNRWKIYQMDVKSAFL 1277

Query: 119  NGDLEEEVYVEQPEDYIANGDEDKVYRLRKALYGLKQAP 3
            NG LEEEVY+EQP  Y+  G EDKVYRL+KALYGLKQAP
Sbjct: 1278 NGYLEEEVYIEQPPGYLKKGHEDKVYRLKKALYGLKQAP 1316


>gb|KYP43625.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1262

 Score =  462 bits (1190), Expect = e-148
 Identities = 234/444 (52%), Positives = 303/444 (68%)
 Frame = -1

Query: 1334 LNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLRTDRGGEFI 1155
            LN N+YF+LF+DDF+RM WVY LKQKSE F  F +FK  VE QSG  +K LRTD G E+ 
Sbjct: 483  LNGNKYFILFIDDFTRMTWVYFLKQKSEVFSVFKKFKALVEAQSGFLLKKLRTDNGKEYT 542

Query: 1154 GKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKIFWAEAVNA 975
               F  +C D G+  QLTV YSPQQNGVAERKNR+++EMAR M+  K LPK FWAEA+N 
Sbjct: 543  STEFNIFCDDLGVEHQLTVSYSPQQNGVAERKNRSVLEMARCMIFEKKLPKSFWAEAINT 602

Query: 974  AIYILNRSPTKAVQNKTPYEAWHQRKPQVNHLKVFGYIAYSHIPSQQREKFDEKGEKMIF 795
            A+Y+ NR PT+A++  TP EAW   KP V HLKVFG + Y+H+P+ +R K DE+ E+ I 
Sbjct: 603  AVYLQNRLPTRAIKGMTPVEAWGGIKPSVRHLKVFGSLCYTHVPAVKRSKLDERAERGIL 662

Query: 794  VGYSDESKGYRLLNPKTNKLIISRDVIFDKMQSWNWNENEKMKKIVHLPGTLPISTSHGD 615
            +GYS +SKGY++    + K+ +SRD+  D+   WNW E  +M++ + LP      ++  D
Sbjct: 663  IGYSSKSKGYKVYGIDSGKVSVSRDIKVDEDAYWNW-ETCQMERHLVLP---TFESTIED 718

Query: 614  QXXXXXXXXXXXXXXXXXXXXXXXXXXPIRRVRSLREIYETCDVAFFACEPQNYEEAAKE 435
            Q                           IR  R L EIY+ C+V     EP N+EEA+K 
Sbjct: 719  Q------------------EEDIDDDFAIRGTRHLSEIYQRCNVV--VLEPTNFEEASKV 758

Query: 434  EVWQIAMDEEIASIEKNNTWELVDLPEGKSVIGVKWIYKTKYKEDGSIHKHKARLVAKGY 255
            + W  AM EE+ +IE N TW+LVD P+ K+VIGVKW+Y+TK   D SI+K+KA LV KGY
Sbjct: 759  DEWNQAMKEEMTTIEDNKTWQLVDKPKDKNVIGVKWVYRTKLNPDRSINKYKAILVVKGY 818

Query: 254  SQQPGVDFNETFAPVARMETIRIVLAIAAQFELPVYQMDVKSAFLNGDLEEEVYVEQPED 75
             QQPG+D+ ETFAPVARM+TIRI+LA+AAQ +  ++ +DVKSAFLNG+L EE+YV QPE 
Sbjct: 819  VQQPGIDYTETFAPVARMDTIRILLALAAQMKWEIWHLDVKSAFLNGNLVEEIYVAQPEG 878

Query: 74   YIANGDEDKVYRLRKALYGLKQAP 3
            ++  GDEDKVY+L KALYGLKQAP
Sbjct: 879  FVVKGDEDKVYKLHKALYGLKQAP 902


>ref|XP_020867873.1| uncharacterized protein LOC110224828 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 961

 Score =  444 bits (1142), Expect = e-144
 Identities = 225/442 (50%), Positives = 292/442 (66%), Gaps = 27/442 (6%)
 Frame = -1

Query: 1334 LNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLRTDRGGEFI 1155
            L  + YFLLF+DDFSR  WVY LK+KSE F  F  FK +VE +SG  IK++R+DRGGEF 
Sbjct: 542  LGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKRFKAHVEKESGLTIKSMRSDRGGEFT 601

Query: 1154 GKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKIFWAEAVNA 975
             K FL YC+D GI RQLTV  SPQQNGVAERKNRTI+EMARSM+  K LPK  WAEAV  
Sbjct: 602  SKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVAY 661

Query: 974  AIYILNRSPTKAVQNKTPYEAWHQRKPQVNHLKVFGYIAYSHIPSQQREKFDEKGEKMIF 795
            A+Y+LNRSPTK++  KTP EAW  RKP V+HL+VFG IA++H+P ++R K D+K EK IF
Sbjct: 662  AVYLLNRSPTKSISGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIF 721

Query: 794  VGYSDESKGYRLLNPKTNKLIISRDVIFDKMQSWNWNENE-----------------KMK 666
            +GY + SKGY+L NP T K IISR+V+FD+ + W+W  NE                 + +
Sbjct: 722  IGYDNNSKGYKLYNPDTKKTIISRNVVFDEEEEWDWKSNEDDYNFFPHFEEDDSELTRDE 781

Query: 665  KIVHLPGTLPIS--TSHGDQXXXXXXXXXXXXXXXXXXXXXXXXXXPIRRVRSLREIYE- 495
                 P T P S  +S G++                               RSL+E+YE 
Sbjct: 782  PPREEPTTPPTSPTSSQGEESSSERTL----------------------HFRSLQELYEV 819

Query: 494  -------TCDVAFFACEPQNYEEAAKEEVWQIAMDEEIASIEKNNTWELVDLPEGKSVIG 336
                   T    F  CEP +++EA +++ W+ AMDEEI +I+KN+TWEL  LP G   IG
Sbjct: 820  TENQDNLTLFCLFAECEPMDFQEAIEKKTWRNAMDEEIKAIKKNDTWELASLPNGHKAIG 879

Query: 335  VKWIYKTKYKEDGSIHKHKARLVAKGYSQQPGVDFNETFAPVARMETIRIVLAIAAQFEL 156
            VKW+YK K    G + ++KARLVAKGYSQ+  +D++E FAPVAR+ET+R+++++AAQ + 
Sbjct: 880  VKWVYKAKKNSKGEVERYKARLVAKGYSQRARIDYDEVFAPVARLETVRLIISLAAQNKW 939

Query: 155  PVYQMDVKSAFLNGDLEEEVYV 90
             ++QMDVKSAFLNGDLEEEVY+
Sbjct: 940  KIHQMDVKSAFLNGDLEEEVYI 961


>gb|KYP55941.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 723

 Score =  429 bits (1103), Expect = e-141
 Identities = 221/428 (51%), Positives = 284/428 (66%)
 Frame = -1

Query: 1286 MMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLRTDRGGEFIGKSFLDYCKDKGIHRQ 1107
            M WVY LKQKSE F  F +FK  VE QSG  +K LRTD G E+    F  +C D G+  Q
Sbjct: 1    MTWVYFLKQKSEVFSVFKKFKALVEAQSGFLLKKLRTDNGKEYTSTEFNIFCDDLGVEHQ 60

Query: 1106 LTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKIFWAEAVNAAIYILNRSPTKAVQNK 927
            LTV YSPQQNGVAERKNR+++EMAR M+  K LPK FWAEA+N A+Y+ NR PT+A++  
Sbjct: 61   LTVSYSPQQNGVAERKNRSVLEMARCMIFEKKLPKSFWAEAINTAVYLQNRLPTRAIKGM 120

Query: 926  TPYEAWHQRKPQVNHLKVFGYIAYSHIPSQQREKFDEKGEKMIFVGYSDESKGYRLLNPK 747
            TP EAW   KP V HLKVFG + Y+H+P+ +R K DE+ EK I +GYS +SKGY++    
Sbjct: 121  TPVEAWGGIKPSVRHLKVFGSLCYTHVPAVKRSKLDERAEKGILIGYSSKSKGYKVYGID 180

Query: 746  TNKLIISRDVIFDKMQSWNWNENEKMKKIVHLPGTLPISTSHGDQXXXXXXXXXXXXXXX 567
            + K+ +SRD+  D+   WNW E  +M++   LP      ++  DQ               
Sbjct: 181  SGKVSVSRDIKVDEDAYWNW-ETCQMERHSVLP---TFESTIEDQ--------------- 221

Query: 566  XXXXXXXXXXXPIRRVRSLREIYETCDVAFFACEPQNYEEAAKEEVWQIAMDEEIASIEK 387
                        IR  R L EIY+ C+V     EP N+EEA+K + W  AM EE+ +IE 
Sbjct: 222  ---EEDIDDDFAIRGTRRLSEIYQRCNVV--VLEPTNFEEASKVDEWNQAMKEEMTTIED 276

Query: 386  NNTWELVDLPEGKSVIGVKWIYKTKYKEDGSIHKHKARLVAKGYSQQPGVDFNETFAPVA 207
            N TW+LVD P+ K+VIGVKW+Y+TK   D SI+K+KA LV KGY QQPG+D+ ETFAPVA
Sbjct: 277  NKTWQLVDKPKDKNVIGVKWVYRTKLNPDRSINKYKAILVVKGYVQQPGIDYTETFAPVA 336

Query: 206  RMETIRIVLAIAAQFELPVYQMDVKSAFLNGDLEEEVYVEQPEDYIANGDEDKVYRLRKA 27
            R + I I+LA+AAQ +  ++ +DVKSAFLNG+L EE+YV QPE ++  GDEDKVY+L KA
Sbjct: 337  RRDPIHILLALAAQMKWEIWHVDVKSAFLNGNLVEEIYVAQPEGFVVKGDEDKVYKLHKA 396

Query: 26   LYGLKQAP 3
            LYGLKQAP
Sbjct: 397  LYGLKQAP 404


>gb|PNY02378.1| putative copia-like retrotransposable element [Trifolium pratense]
          Length = 1018

 Score =  433 bits (1114), Expect = e-139
 Identities = 214/447 (47%), Positives = 293/447 (65%), Gaps = 3/447 (0%)
 Frame = -1

Query: 1334 LNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLRTDRGGEFI 1155
            LN + Y+++F+DD +RM W+Y L+ KSE    F +FK +VENQS   I+ LR+D G E++
Sbjct: 528  LNGSLYYIVFIDDLTRMCWIYFLRYKSEVAAVFWKFKAHVENQSNSHIQILRSDNGKEYL 587

Query: 1154 GKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKIFWAEAVNA 975
               F  +C + GI  QLT  Y+PQQNGV+ERKNR+I++M R M+  K LPK  WAEA + 
Sbjct: 588  SNQFQQFCDEAGIEHQLTAPYTPQQNGVSERKNRSIMDMVRCMLHQKELPKKLWAEAAST 647

Query: 974  AIYILNRSPTKAVQNKTPYEAWHQRKPQVNHLKVFGYIAYSHIPSQQREKFDEKGEKMIF 795
            A++I NR PT+A+QN+TP+EAW   KP ++  KVFG + YSH+P  +R+K D+K E  IF
Sbjct: 648  AVFIQNRLPTRALQNQTPFEAWFGFKPSLDFFKVFGCLCYSHVPQVKRDKLDKKAEPGIF 707

Query: 794  VGYSDESKGYRLLNPKTNKLIISRDVIFDKMQSWNWNENEKMKKIVHLPGTLPISTSHGD 615
            +GYS  SK Y++  P+T KL++SRDV F + + W+W++ +     +    T+        
Sbjct: 708  IGYSTISKAYKIFQPQTGKLLVSRDVHFMENEKWSWSDPKNKNVALEFQDTI-------- 759

Query: 614  QXXXXXXXXXXXXXXXXXXXXXXXXXXPIRRVRSLREIYETCDVA---FFACEPQNYEEA 444
                                       P+R  R + +IY+  ++A       EP ++EEA
Sbjct: 760  ------------------------DDPPVRGTRLVSDIYQRSNIAVCNIVVFEPSSFEEA 795

Query: 443  AKEEVWQIAMDEEIASIEKNNTWELVDLPEGKSVIGVKWIYKTKYKEDGSIHKHKARLVA 264
            A EE W  AM EE++ IEKN TWELV  P  + VIGVKW+++TK+  DGSI+KHKARLV 
Sbjct: 796  ATEEKWLAAMQEELSMIEKNQTWELVPRPRDRKVIGVKWVFRTKFNPDGSINKHKARLVV 855

Query: 263  KGYSQQPGVDFNETFAPVARMETIRIVLAIAAQFELPVYQMDVKSAFLNGDLEEEVYVEQ 84
            KGYSQ  G+D+++TFAPVAR +TIR++LAI AQ    V+ MDVKSAFLNG L+EE+YVEQ
Sbjct: 856  KGYSQIFGIDYSDTFAPVARQDTIRLLLAIVAQKGWQVFHMDVKSAFLNGFLQEEIYVEQ 915

Query: 83   PEDYIANGDEDKVYRLRKALYGLKQAP 3
            PE +   G ED+VY L+KALYGLKQAP
Sbjct: 916  PEGFSVKGQEDRVYLLKKALYGLKQAP 942


>emb|CAN68235.1| hypothetical protein VITISV_037104 [Vitis vinifera]
          Length = 2041

 Score =  446 bits (1147), Expect = e-138
 Identities = 229/444 (51%), Positives = 293/444 (65%)
 Frame = -1

Query: 1334 LNDNRYFLLFVDDFSRMMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLRTDRGGEFI 1155
            L++N YF LF+DDFSRM WVY LK KS+    F  FKK VE QSG+ +K LRTD GGE+ 
Sbjct: 1254 LSNNVYFALFIDDFSRMTWVYFLKTKSQVLSMFKSFKKMVETQSGQXVKVLRTDNGGEYT 1313

Query: 1154 GKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKIFWAEAVNA 975
             K F  +C++ GI  QLT  YSPQ NGV+ERKNRT++EMAR M+  K LPK+ WAEAVN 
Sbjct: 1314 SKEFSVFCQEAGIVHQLTAPYSPQXNGVSERKNRTVMEMARCMLFEKKLPKLLWAEAVNT 1373

Query: 974  AIYILNRSPTKAVQNKTPYEAWHQRKPQVNHLKVFGYIAYSHIPSQQREKFDEKGEKMIF 795
            ++Y+LNR PTK+VQ+KTP EAW   KP V HLKVFG   Y H+PS +R K DE+ EK +F
Sbjct: 1374 SVYLLNRLPTKSVQSKTPIEAWSGVKPSVKHLKVFGSFCYLHVPSVKRGKLDERAEKGVF 1433

Query: 794  VGYSDESKGYRLLNPKTNKLIISRDVIFDKMQSWNWNENEKMKKIVHLPGTLPISTSHGD 615
            VGY+ ESKGYR+ +    K++ISRDV FD+   W W+    +KK+     T P       
Sbjct: 1434 VGYAAESKGYRIYSLSRMKIVISRDVHFDENSYWXWD----LKKVHKCDQTTP------- 1482

Query: 614  QXXXXXXXXXXXXXXXXXXXXXXXXXXPIRRVRSLREIYETCDVAFFACEPQNYEEAAKE 435
                                       P+ ++R L ++YE C++     EP  Y EAA+ 
Sbjct: 1483 ---SILEPAIESTIIEGPLDVEATSDTPVLKMRPLFDVYERCNLVH--AEPTCYTEAARF 1537

Query: 434  EVWQIAMDEEIASIEKNNTWELVDLPEGKSVIGVKWIYKTKYKEDGSIHKHKARLVAKGY 255
              W  AM  EI +IE+N TW+L +LPE K+ IGVKW+++TK+  DGSI +HKARLV KG+
Sbjct: 1538 LEWIEAMKAEIDAIERNGTWKLTELPEAKNAIGVKWVFRTKFNSDGSIFRHKARLVVKGF 1597

Query: 254  SQQPGVDFNETFAPVARMETIRIVLAIAAQFELPVYQMDVKSAFLNGDLEEEVYVEQPED 75
            +Q  GVD+ +TFAPVAR +TIR++LA+A Q    VY +DVKSAFLNG L EE+YV+QPE 
Sbjct: 1598 AQVAGVDYGDTFAPVARHDTIRLLLALAGQMGWKVYHLDVKSAFLNGILLEEIYVQQPEG 1657

Query: 74   YIANGDEDKVYRLRKALYGLKQAP 3
            +   G E KVY+L KALYGLKQAP
Sbjct: 1658 FEVIGHEHKVYKLHKALYGLKQAP 1681


>gb|KYP60991.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 612

 Score =  413 bits (1062), Expect = e-136
 Identities = 204/369 (55%), Positives = 258/369 (69%)
 Frame = -1

Query: 1286 MMWVYILKQKSEAFPKFLEFKKYVENQSGRKIKTLRTDRGGEFIGKSFLDYCKDKGIHRQ 1107
            M WVY LK KSE F  F +FK +VE QS ++IK  R+DRG E+  + F  +C+D+GI RQ
Sbjct: 1    MTWVYFLKTKSEVFGIFKKFKAFVEKQSEKQIKVRRSDRGNEYTSREFDKFCEDEGIERQ 60

Query: 1106 LTVRYSPQQNGVAERKNRTIVEMARSMMTGKGLPKIFWAEAVNAAIYILNRSPTKAVQNK 927
            LTV Y+PQQNGV+ERKNRT++EMARSM+  KGLP  FWAEAV  A+Y+LNR PTKAV++K
Sbjct: 61   LTVAYTPQQNGVSERKNRTVMEMARSMLKEKGLPNTFWAEAVYTAVYLLNRCPTKAVRDK 120

Query: 926  TPYEAWHQRKPQVNHLKVFGYIAYSHIPSQQREKFDEKGEKMIFVGYSDESKGYRLLNPK 747
            TP EAW  +KP   HL+VFG I Y H+P ++R K ++K  + IF+GYS +SKGYR+ N +
Sbjct: 121  TPIEAWSGKKPSAKHLRVFGSICYIHVPDEKRHKLEDKTVRGIFLGYSSQSKGYRVYNLQ 180

Query: 746  TNKLIISRDVIFDKMQSWNWNENEKMKKIVHLPGTLPISTSHGDQXXXXXXXXXXXXXXX 567
            T KL ISRD+  D+  +WNW E    KK +++P   P ++S  D                
Sbjct: 181  TKKLTISRDIEVDENATWNWEEERIEKKTIYMPINQPTTSSLEDNNQDIVISPESPRIVP 240

Query: 566  XXXXXXXXXXXPIRRVRSLREIYETCDVAFFACEPQNYEEAAKEEVWQIAMDEEIASIEK 387
                         RRVRSL +IYETC++A    EP ++EEAA +EVW  AM+EEI  IEK
Sbjct: 241  QQEESSPESTP--RRVRSLVDIYETCNLAIL--EPGSFEEAANQEVWVKAMEEEIKMIEK 296

Query: 386  NNTWELVDLPEGKSVIGVKWIYKTKYKEDGSIHKHKARLVAKGYSQQPGVDFNETFAPVA 207
            NNTWELVD P GK +IGVKW+YKTK   DG+I KHKARLVAKGYSQQPGVD+NETFAPVA
Sbjct: 297  NNTWELVDCPHGKDIIGVKWVYKTKLNPDGTIQKHKARLVAKGYSQQPGVDYNETFAPVA 356

Query: 206  RMETIRIVL 180
            R++TIR ++
Sbjct: 357  RLDTIRALI 365


>gb|PNX89974.1| copia-type polyprotein, partial [Trifolium pratense]
          Length = 415

 Score =  397 bits (1021), Expect = e-132
 Identities = 204/416 (49%), Positives = 271/416 (65%), Gaps = 11/416 (2%)
 Frame = -1

Query: 1217 VENQSGRKIKTLRTDRGGEFIGKSFLDYCKDKGIHRQLTVRYSPQQNGVAERKNRTIVEM 1038
            VE ++   I+ LRTDRGGEF    F  +C   GI RQLT  ++PQQNGVAERKN+TI+ M
Sbjct: 2    VEKETRASIQCLRTDRGGEFTSHEFNSFCSSHGIKRQLTAAFTPQQNGVAERKNQTIMNM 61

Query: 1037 ARSMMTGKGLPKIFWAEAVNAAIYILNRSPTKAVQNKTPYEAWHQRKPQVNHLKVFGYIA 858
             R M++ K LPK  W EAVN A++ILNRSPT AV++KTP EAW   KP V++LKVFG +A
Sbjct: 62   VRCMLSEKHLPKFLWGEAVNWAVHILNRSPTLAVKDKTPEEAWSDIKPAVHYLKVFGCVA 121

Query: 857  YSHIPSQQREKFDEKGEKMIFVGYSDESKGYRLLNPKTNKLIISRDVIFDKMQSWNWNEN 678
            + HIP  +R+K D K  + + +G SDESK YRL +P T +++IS+DVIF++ + W+W  +
Sbjct: 122  HVHIPEAKRKKLDAKSFRCVMLGISDESKAYRLFDPTTKRIVISKDVIFEENECWDWERS 181

Query: 677  EKMKKIVHLPGTLPISTSHGDQXXXXXXXXXXXXXXXXXXXXXXXXXXPIRRVRSLREIY 498
             +  K    P  L    S  ++                           +RR     + Y
Sbjct: 182  PEQMK----PDLLDWGESEEERNENTEEVREGMGSSSSLSSEEAPIEGRVRRPPGWMQDY 237

Query: 497  ---------ETCDVAFF--ACEPQNYEEAAKEEVWQIAMDEEIASIEKNNTWELVDLPEG 351
                     E  ++  F  A +P  +EEA K E W+ AM+ E+ +IEKNNTWEL DLP G
Sbjct: 238  TSGEEFSEEEIQNLVMFTVASDPTTFEEAVKSEKWRNAMNNEMEAIEKNNTWELTDLPTG 297

Query: 350  KSVIGVKWIYKTKYKEDGSIHKHKARLVAKGYSQQPGVDFNETFAPVARMETIRIVLAIA 171
               IG+KWI+KTK  E+G + K+KARLVAKGYSQQ GVD+ E FAPVAR +TIR+V+A+A
Sbjct: 298  AKTIGLKWIFKTKLNENGEVEKYKARLVAKGYSQQYGVDYTEVFAPVARWDTIRMVIALA 357

Query: 170  AQFELPVYQMDVKSAFLNGDLEEEVYVEQPEDYIANGDEDKVYRLRKALYGLKQAP 3
            AQ    VYQ+DVKSAFL+G+L E+V+V+QP+ Y+  GDE KVY+L++ALYGLKQAP
Sbjct: 358  AQKGWNVYQLDVKSAFLHGELNEQVFVDQPQGYVKKGDELKVYKLKRALYGLKQAP 413