BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00007624
         (1810 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011075762.1| RNA polymerase sigma factor sigA [Sesamum in...   803   0.0  
gb|PIN23497.1| hypothetical protein CDL12_03781 [Handroanthus im...   803   0.0  
ref|XP_012850610.1| PREDICTED: RNA polymerase sigma factor sigA ...   740   0.0  
gb|EYU44876.1| hypothetical protein MIMGU_mgv1a004509mg [Erythra...   734   0.0  
ref|XP_022861587.1| RNA polymerase sigma factor sigA [Olea europ...   698   0.0  
ref|XP_015164353.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...   669   0.0  
ref|XP_015070237.1| PREDICTED: RNA polymerase sigma factor sigA ...   669   0.0  
ref|XP_004235299.1| PREDICTED: RNA polymerase sigma factor sigA ...   668   0.0  
ref|NP_001312542.1| RNA polymerase sigma factor sigA-like [Nicot...   660   0.0  
ref|XP_009771934.1| PREDICTED: RNA polymerase sigma factor sigA ...   660   0.0  
gb|EOY10268.1| Sigma factor A isoform 1 [Theobroma cacao]             660   0.0  
ref|XP_021656961.1| RNA polymerase sigma factor sigA-like isofor...   660   0.0  
ref|XP_021624392.1| RNA polymerase sigma factor sigA-like [Manih...   660   0.0  
ref|XP_007029766.2| PREDICTED: RNA polymerase sigma factor sigA ...   659   0.0  
ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA ...   657   0.0  
gb|OMO87271.1| RNA polymerase sigma-70 [Corchorus capsularis]         655   0.0  
ref|XP_019259164.1| PREDICTED: RNA polymerase sigma factor sigA-...   654   0.0  
emb|CDP04910.1| unnamed protein product [Coffea canephora]            654   0.0  
gb|KDO48032.1| hypothetical protein CISIN_1g010521mg [Citrus sin...   653   0.0  
gb|OMP05985.1| RNA polymerase sigma-70 [Corchorus olitorius]          652   0.0  

>ref|XP_011075762.1| RNA polymerase sigma factor sigA [Sesamum indicum]
 ref|XP_020548999.1| RNA polymerase sigma factor sigA [Sesamum indicum]
          Length = 505

 Score =  803 bits (2073), Expect = 0.0
 Identities = 420/507 (82%), Positives = 447/507 (88%), Gaps = 6/507 (1%)
 Frame = +3

Query: 96   MIMATA-VIGLSTGKRLLLSSTFYYSDLSEKLACTTDPHHQNASTKNAITAKRSSNFVSN 272
            MIMATA VIGLSTGKRLLLSSTF YSDLS+KLACTTDPH+Q ASTKNAITAK+SSNF+SN
Sbjct: 1    MIMATAAVIGLSTGKRLLLSSTFSYSDLSDKLACTTDPHYQIASTKNAITAKKSSNFISN 60

Query: 273  RRSQ-SIRALKEHHVDTASNPCTLEPWLIHGSSLLNEEISDPEYLVDAILLLQKSMLEKQ 449
            RR   S+RALKEH VDTASN CTLEPWLIHGS+L  +E +DPEYLVDA+LLLQKSMLEKQ
Sbjct: 61   RRPPASVRALKEH-VDTASNNCTLEPWLIHGSTLSTDETTDPEYLVDAVLLLQKSMLEKQ 119

Query: 450  WNLSAETTKTT----SRARKKIQVICSGTSARRRRMDSRKKVIGRKVSNPGQLNTSKQWR 617
            WNLSAETT        RAR KI+V CSGTSARRRRMDSRKK++GRK     QL TS+QWR
Sbjct: 120  WNLSAETTTKAVIPKDRARNKIEVTCSGTSARRRRMDSRKKILGRKFP-ASQLTTSRQWR 178

Query: 618  SIISPELLQNSLKGYVKGVISDELLTHAQVVQLSQKIKAGXXXXXXXXXXXXXXGCEPSD 797
            SI+SPELLQN LKGYVKGV+S+ELLTHAQVVQLS+KIKAG              G EPSD
Sbjct: 179  SIVSPELLQNRLKGYVKGVVSEELLTHAQVVQLSEKIKAGLLLEEQKSRLKERLGFEPSD 238

Query: 798  EQLATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMADXXXXXXXX 977
            EQLATSLRISRT+LQSK+IECSLAR+KLAMSNIRLVMSIAQRYDNMGAEMAD        
Sbjct: 239  EQLATSLRISRTNLQSKLIECSLARDKLAMSNIRLVMSIAQRYDNMGAEMADLIQGGLIG 298

Query: 978  XXXXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKARLE 1157
                 EKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERL LIRNAKARLE
Sbjct: 299  LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKARLE 358

Query: 1158 EKGITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGLPGESLHSYIADNHI 1337
            EKGITPSID+IAE LNMSQKK++NATEAI+KVFSLDREAFPSLNGLPGE+LHSYIADNH+
Sbjct: 359  EKGITPSIDRIAECLNMSQKKVKNATEAITKVFSLDREAFPSLNGLPGETLHSYIADNHV 418

Query: 1338 ENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRRIGLSRERV 1517
            ENNPWHGVDEWALKDEVDKLI LTLRERER+IIRLYYGLDNECLTWEDISRRIGLSRERV
Sbjct: 419  ENNPWHGVDEWALKDEVDKLINLTLREREREIIRLYYGLDNECLTWEDISRRIGLSRERV 478

Query: 1518 RQVGLVALEKLKHAARKRRLDAMLVQH 1598
            RQVGLVALEKLKHAARKRRLD MLVQH
Sbjct: 479  RQVGLVALEKLKHAARKRRLDTMLVQH 505


>gb|PIN23497.1| hypothetical protein CDL12_03781 [Handroanthus impetiginosus]
          Length = 510

 Score =  803 bits (2073), Expect = 0.0
 Identities = 424/512 (82%), Positives = 449/512 (87%), Gaps = 11/512 (2%)
 Frame = +3

Query: 96   MIMAT-AVIGLSTGKRLLLSSTFYYSDLSEKLACT-TDPHHQNASTKNAITAKRSSNFVS 269
            MIMAT A +GLSTGKRL L STF+YSDL+EKLACT TDP++Q AS+KNAITAK+SSNF+S
Sbjct: 1    MIMATTAFVGLSTGKRLFLGSTFFYSDLAEKLACTSTDPNYQIASSKNAITAKKSSNFIS 60

Query: 270  NRRSQSIRALKEHHVDTASNPCTLEPWLIHG---SSLLNEEISDPEYLVDAILLLQKSML 440
            NRR QSIRALKEH +D ASNPCTLEPWLIHG   SSLLN+E S+ EYLVDAILLLQKSML
Sbjct: 61   NRRPQSIRALKEH-LDAASNPCTLEPWLIHGTSESSLLNDESSNHEYLVDAILLLQKSML 119

Query: 441  EKQWNLSAETTKTTS------RARKKIQVICSGTSARRRRMDSRKKVIGRKVSNPGQLNT 602
            EKQWNLSA  T T +         KKIQV CSGTSARRRRMDSRKKV+GRK+S   QLN+
Sbjct: 120  EKQWNLSANQTTTRTVIQKGEMEHKKIQVTCSGTSARRRRMDSRKKVLGRKIST-SQLNS 178

Query: 603  SKQWRSIISPELLQNSLKGYVKGVISDELLTHAQVVQLSQKIKAGXXXXXXXXXXXXXXG 782
            SKQWRS++SPELLQN LKGYVKGV+S+ELLTHA+VVQLSQKIKAG              G
Sbjct: 179  SKQWRSVVSPELLQNRLKGYVKGVVSEELLTHAEVVQLSQKIKAGLLLEDHKSRLEERLG 238

Query: 783  CEPSDEQLATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMADXXX 962
            CEPSDEQLATSLRISR DLQSK+IECSLAREKLAMSNIRLVMSIAQRYDNMGAEMAD   
Sbjct: 239  CEPSDEQLATSLRISRADLQSKLIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMADLIQ 298

Query: 963  XXXXXXXXXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA 1142
                      EKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERL LIRNA
Sbjct: 299  GGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNA 358

Query: 1143 KARLEEKGITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGLPGESLHSYI 1322
            KARLEEKGITPSID+IAE LNMSQKK+RNATEAISKVFSLDREAFPSLNGLPGE+LHSYI
Sbjct: 359  KARLEEKGITPSIDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYI 418

Query: 1323 ADNHIENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRRIGL 1502
            ADN IENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRRIGL
Sbjct: 419  ADNRIENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRRIGL 478

Query: 1503 SRERVRQVGLVALEKLKHAARKRRLDAMLVQH 1598
            SRERVRQVGLVALEKLKHAARKRRLDAMLV+H
Sbjct: 479  SRERVRQVGLVALEKLKHAARKRRLDAMLVKH 510


>ref|XP_012850610.1| PREDICTED: RNA polymerase sigma factor sigA [Erythranthe guttata]
 ref|XP_012850616.1| PREDICTED: RNA polymerase sigma factor sigA [Erythranthe guttata]
 gb|EYU44877.1| hypothetical protein MIMGU_mgv1a004509mg [Erythranthe guttata]
 gb|EYU44878.1| hypothetical protein MIMGU_mgv1a004509mg [Erythranthe guttata]
          Length = 520

 Score =  740 bits (1910), Expect = 0.0
 Identities = 397/521 (76%), Positives = 434/521 (83%), Gaps = 20/521 (3%)
 Frame = +3

Query: 96   MIMATAVI--GLSTGKRLLLSSTFYYSDLSEK-LACTTDPHHQNASTKNAITAKRSSNFV 266
            MIMATA +  GLSTGKRLLLSS+ +YSD+S+K +AC+TD H   AS+K  I AK+SSNF 
Sbjct: 1    MIMATAAVINGLSTGKRLLLSSSLFYSDVSDKFVACSTDSHCPIASSKKPINAKKSSNFF 60

Query: 267  SNRRSQSIRALKEHHVDTASNPCTLEPWLIHGSSLLNEEI-SDPEYLVDAILLLQKSMLE 443
            SNR   SIRALKEH VD AS+PCTLEPWLIHGS+LL EE  +  EYLVDA+LLLQKS+LE
Sbjct: 61   SNRHPHSIRALKEH-VDAASDPCTLEPWLIHGSTLLGEEDETSDEYLVDAVLLLQKSLLE 119

Query: 444  KQWNLSAET-TKTT-------------SRARKKI-QVICSGTSARRRRMDSRKKVIGRKV 578
            KQWNLSAE+ TK T             +RARKKI QV CSGTSAR RRMDSRKK +GR +
Sbjct: 120  KQWNLSAESSTKQTVTSPRERTPAPARARARKKITQVTCSGTSARSRRMDSRKKAVGRNI 179

Query: 579  SNPGQLNTSKQWRSIISPELLQNSLK-GYVKGVISDELLTHAQVVQLSQKIKAGXXXXXX 755
            SN    N  KQWRSIISPELLQNS + GYVKGVIS++LLTH+QVVQLSQ IKAG      
Sbjct: 180  SNSHHDNVRKQWRSIISPELLQNSSRRGYVKGVISEDLLTHSQVVQLSQIIKAGLLLEDR 239

Query: 756  XXXXXXXXGCEPSDEQLATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNM 935
                    GCEPSDEQLATSL+ISR DLQSK+IECSLAREKLAMSNIRLVMSIAQRYD+M
Sbjct: 240  RSRLKERLGCEPSDEQLATSLQISRADLQSKLIECSLAREKLAMSNIRLVMSIAQRYDHM 299

Query: 936  GAEMADXXXXXXXXXXXXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLH 1115
            GAEMAD             EK+DSSKGFKISTYVYWWIRQGVS+ALVENSRTLRLPTHLH
Sbjct: 300  GAEMADLIQGGLIGLLRGIEKYDSSKGFKISTYVYWWIRQGVSKALVENSRTLRLPTHLH 359

Query: 1116 ERLGLIRNAKARLEEKGITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGL 1295
            ERL LIRNAKARLEEKGITPSI +IAE+LNMSQKK+RNATEA SKVFSLDREAFPSLNG+
Sbjct: 360  ERLSLIRNAKARLEEKGITPSISRIAESLNMSQKKVRNATEANSKVFSLDREAFPSLNGI 419

Query: 1296 PGESLHSYIADNHIENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTW 1475
            PG++LHSYIADNH+EN PWHGVDEWALKDEVDKLITLTLRERER+IIRLYYGLDNECLTW
Sbjct: 420  PGKTLHSYIADNHVENIPWHGVDEWALKDEVDKLITLTLREREREIIRLYYGLDNECLTW 479

Query: 1476 EDISRRIGLSRERVRQVGLVALEKLKHAARKRRLDAMLVQH 1598
            EDISRRIGLSRERVRQVGLVALEKLKHAAR  RLDA+ +QH
Sbjct: 480  EDISRRIGLSRERVRQVGLVALEKLKHAARNTRLDALFIQH 520


>gb|EYU44876.1| hypothetical protein MIMGU_mgv1a004509mg [Erythranthe guttata]
          Length = 523

 Score =  734 bits (1896), Expect = 0.0
 Identities = 397/524 (75%), Positives = 434/524 (82%), Gaps = 23/524 (4%)
 Frame = +3

Query: 96   MIMATAVI--GLSTGKRLLLSSTFYYSDLSEK-LACTTDPHHQNASTKNAITAKRSSNFV 266
            MIMATA +  GLSTGKRLLLSS+ +YSD+S+K +AC+TD H   AS+K  I AK+SSNF 
Sbjct: 1    MIMATAAVINGLSTGKRLLLSSSLFYSDVSDKFVACSTDSHCPIASSKKPINAKKSSNFF 60

Query: 267  SNRRSQSIRALKEHHVDTASNPCTLEPWLIHGSSLLNEEI-SDPEYLVDAILLLQKSMLE 443
            SNR   SIRALKEH VD AS+PCTLEPWLIHGS+LL EE  +  EYLVDA+LLLQKS+LE
Sbjct: 61   SNRHPHSIRALKEH-VDAASDPCTLEPWLIHGSTLLGEEDETSDEYLVDAVLLLQKSLLE 119

Query: 444  KQWNLSAET-TKTT-------------SRARKKI-QVICSGTSARRRRMDSRKKVIGRKV 578
            KQWNLSAE+ TK T             +RARKKI QV CSGTSAR RRMDSRKK +GR +
Sbjct: 120  KQWNLSAESSTKQTVTSPRERTPAPARARARKKITQVTCSGTSARSRRMDSRKKAVGRNI 179

Query: 579  SNPGQLNTSKQWRSIISPELLQNSLK-GYVKGVISDELLTHAQVVQLSQKIKAGXXXXXX 755
            SN    N  KQWRSIISPELLQNS + GYVKGVIS++LLTH+QVVQLSQ IKAG      
Sbjct: 180  SNSHHDNVRKQWRSIISPELLQNSSRRGYVKGVISEDLLTHSQVVQLSQIIKAGLLLEDR 239

Query: 756  XXXXXXXXGCEPSDEQLATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNM 935
                    GCEPSDEQLATSL+ISR DLQSK+IECSLAREKLAMSNIRLVMSIAQRYD+M
Sbjct: 240  RSRLKERLGCEPSDEQLATSLQISRADLQSKLIECSLAREKLAMSNIRLVMSIAQRYDHM 299

Query: 936  GAEMADXXXXXXXXXXXXXEKFDSSKGFKISTYVYWWIRQ---GVSRALVENSRTLRLPT 1106
            GAEMAD             EK+DSSKGFKISTYVYWWIRQ   GVS+ALVENSRTLRLPT
Sbjct: 300  GAEMADLIQGGLIGLLRGIEKYDSSKGFKISTYVYWWIRQHCQGVSKALVENSRTLRLPT 359

Query: 1107 HLHERLGLIRNAKARLEEKGITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSL 1286
            HLHERL LIRNAKARLEEKGITPSI +IAE+LNMSQKK+RNATEA SKVFSLDREAFPSL
Sbjct: 360  HLHERLSLIRNAKARLEEKGITPSISRIAESLNMSQKKVRNATEANSKVFSLDREAFPSL 419

Query: 1287 NGLPGESLHSYIADNHIENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNEC 1466
            NG+PG++LHSYIADNH+EN PWHGVDEWALKDEVDKLITLTLRERER+IIRLYYGLDNEC
Sbjct: 420  NGIPGKTLHSYIADNHVENIPWHGVDEWALKDEVDKLITLTLREREREIIRLYYGLDNEC 479

Query: 1467 LTWEDISRRIGLSRERVRQVGLVALEKLKHAARKRRLDAMLVQH 1598
            LTWEDISRRIGLSRERVRQVGLVALEKLKHAAR  RLDA+ +QH
Sbjct: 480  LTWEDISRRIGLSRERVRQVGLVALEKLKHAARNTRLDALFIQH 523


>ref|XP_022861587.1| RNA polymerase sigma factor sigA [Olea europaea var. sylvestris]
 ref|XP_022861588.1| RNA polymerase sigma factor sigA [Olea europaea var. sylvestris]
 ref|XP_022861589.1| RNA polymerase sigma factor sigA [Olea europaea var. sylvestris]
          Length = 496

 Score =  698 bits (1802), Expect = 0.0
 Identities = 374/504 (74%), Positives = 413/504 (81%), Gaps = 4/504 (0%)
 Frame = +3

Query: 96   MIMATAVIGLSTGKRLLLSSTFYYSDLSEKLACTTDPHHQNASTKNAITAKRSSN----F 263
            M+  TAVIGLSTGKRLL SS FYYSD  EKLA T+  H    STKN ITAK+SSN    F
Sbjct: 1    MMATTAVIGLSTGKRLL-SSNFYYSDFVEKLAGTSYQHQVLPSTKNVITAKKSSNYGPTF 59

Query: 264  VSNRRSQSIRALKEHHVDTASNPCTLEPWLIHGSSLLNEEISDPEYLVDAILLLQKSMLE 443
            +S+R  QSIRA+KEH VDTASNP  +E  L  G     EE SDP+YLVDA+LLLQK MLE
Sbjct: 60   LSDRNPQSIRAVKEH-VDTASNPYAVEEPLPQG-----EETSDPDYLVDALLLLQKFMLE 113

Query: 444  KQWNLSAETTKTTSRARKKIQVICSGTSARRRRMDSRKKVIGRKVSNPGQLNTSKQWRSI 623
            KQWNLS  T   + + RKK+QV  SGTSARRRR+DSR+K+I R+ S   Q+  SKQ RS+
Sbjct: 114  KQWNLS--TDMPSEKGRKKVQVTGSGTSARRRRIDSRRKLIFRRSSTTAQIGKSKQLRSV 171

Query: 624  ISPELLQNSLKGYVKGVISDELLTHAQVVQLSQKIKAGXXXXXXXXXXXXXXGCEPSDEQ 803
            ISPELLQN  KGY+KGV+S+ELLTH +VVQLS+KIKAG              GC+PSDEQ
Sbjct: 172  ISPELLQNRTKGYIKGVVSEELLTHVEVVQLSKKIKAGLLLEEHKSRLKERLGCDPSDEQ 231

Query: 804  LATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMADXXXXXXXXXX 983
            LATSLRISR +LQS+ +ECSLAREKL MSNIRLVMSIAQRYDNMGAEMAD          
Sbjct: 232  LATSLRISRAELQSEFMECSLAREKLTMSNIRLVMSIAQRYDNMGAEMADLIQGGLIGLL 291

Query: 984  XXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKARLEEK 1163
               EKFDSSKG+KISTYVYWWIRQGVSRALV NSRTLRLPTHLHERL LIRNAKA+LEEK
Sbjct: 292  RGIEKFDSSKGYKISTYVYWWIRQGVSRALVRNSRTLRLPTHLHERLSLIRNAKAKLEEK 351

Query: 1164 GITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGLPGESLHSYIADNHIEN 1343
            GITPS+D+IAE LNMSQKK+RNATEAISKVFSLDREAFPSLNGLPGE+LHSYIAD  IEN
Sbjct: 352  GITPSVDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIADTRIEN 411

Query: 1344 NPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRRIGLSRERVRQ 1523
            NPWH VDEWALKDEVDKL++ TLRERE++IIRLYYGLDNECLTWEDISRRIGLSRERVRQ
Sbjct: 412  NPWHEVDEWALKDEVDKLLSSTLREREQEIIRLYYGLDNECLTWEDISRRIGLSRERVRQ 471

Query: 1524 VGLVALEKLKHAARKRRLDAMLVQ 1595
            VGLVALEKLKHAARKRRLDAML++
Sbjct: 472  VGLVALEKLKHAARKRRLDAMLLK 495


>ref|XP_015164353.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase sigma factor sigA
            [Solanum tuberosum]
          Length = 509

 Score =  669 bits (1726), Expect = 0.0
 Identities = 352/511 (68%), Positives = 409/511 (80%), Gaps = 11/511 (2%)
 Frame = +3

Query: 96   MIMATAVIGLSTGKRLLLSSTFYYSDLSEKLACTTD---PHHQNASTKNAITAKRSSNF- 263
            M+  TAVIGLS GKRLL SS+FYYSDL+EKL+C++D   P HQ  S KN ITAK+SSN+ 
Sbjct: 1    MMATTAVIGLSAGKRLL-SSSFYYSDLNEKLSCSSDHSFPCHQVPSVKNVITAKKSSNYS 59

Query: 264  ---VSNRRSQSIRALKEHHVDTASNPCTLEPWLIHGSSLLNEEISDPEYLVDAILLLQKS 434
               VS+R+ QS++ALKEH +D AS+P  ++ W      L NE   + +  V+A LLLQKS
Sbjct: 60   PSYVSSRKLQSVKALKEH-IDIASDPSDVQSWFERFEQLQNESDDEDDDSVEAFLLLQKS 118

Query: 435  MLEKQWNLSAETTKTTSRAR----KKIQVICSGTSARRRRMDSRKKVIGRKVSNPGQLNT 602
            MLEKQWNLSAE T T S       KK+ + CSGT+ARRRR DSR++V+G K S+   ++ 
Sbjct: 119  MLEKQWNLSAEETLTASPQHEKNCKKMHITCSGTTARRRRTDSRQRVLGPK-SSATPISA 177

Query: 603  SKQWRSIISPELLQNSLKGYVKGVISDELLTHAQVVQLSQKIKAGXXXXXXXXXXXXXXG 782
            +K  RSII PELLQN LKGYVKGV+SDELLTH +V+QLS+KI+ G              G
Sbjct: 178  TKPLRSIIGPELLQNRLKGYVKGVVSDELLTHTEVLQLSKKIQVGLHVEEQKSRLKDRLG 237

Query: 783  CEPSDEQLATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMADXXX 962
            CEPSD+QLA SL++ RTDLQS +IECSLARE+L+MSN+RLVMSIAQRYDNMGAEMAD   
Sbjct: 238  CEPSDDQLALSLKMPRTDLQSTLIECSLARERLSMSNVRLVMSIAQRYDNMGAEMADLVQ 297

Query: 963  XXXXXXXXXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA 1142
                      EKFD SKG+KISTYVYWWIRQGVSR LVENSRTLRLPTHLHERLGLIRNA
Sbjct: 298  GGLIGLLRGIEKFDPSKGYKISTYVYWWIRQGVSRTLVENSRTLRLPTHLHERLGLIRNA 357

Query: 1143 KARLEEKGITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGLPGESLHSYI 1322
            K RLEEKGITPS++ IA +LNMSQKK+RNATEA SKV+SLDRE FPSLNGLPG +LHSYI
Sbjct: 358  KMRLEEKGITPSVNNIAASLNMSQKKVRNATEASSKVYSLDREVFPSLNGLPGATLHSYI 417

Query: 1323 ADNHIENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRRIGL 1502
            ADNH+ENNPWHGVD WALKDEV+ LI+ +LRERER+IIRLYYGLD+ECLTWEDIS+RIGL
Sbjct: 418  ADNHLENNPWHGVDTWALKDEVNNLISSSLREREREIIRLYYGLDSECLTWEDISKRIGL 477

Query: 1503 SRERVRQVGLVALEKLKHAARKRRLDAMLVQ 1595
            SRERVRQVGLVALEKLKHAARKRRLDAML++
Sbjct: 478  SRERVRQVGLVALEKLKHAARKRRLDAMLIK 508


>ref|XP_015070237.1| PREDICTED: RNA polymerase sigma factor sigA [Solanum pennellii]
          Length = 509

 Score =  669 bits (1726), Expect = 0.0
 Identities = 350/511 (68%), Positives = 411/511 (80%), Gaps = 11/511 (2%)
 Frame = +3

Query: 96   MIMATAVIGLSTGKRLLLSSTFYYSDLSEKLACTTD---PHHQNASTKNAITAKRSSNF- 263
            M+  TAVIGLS GKRLL SS+FYYSDL+EKL+C++D   P HQ  + KN I+AK+SS++ 
Sbjct: 1    MMATTAVIGLSAGKRLL-SSSFYYSDLNEKLSCSSDHSLPCHQVPTVKNVISAKKSSDYS 59

Query: 264  ---VSNRRSQSIRALKEHHVDTASNPCTLEPWLIHGSSLLNEEISDPEYLVDAILLLQKS 434
               VS+R+ QS++ALKEH VD AS+P  ++ W      L NE   + +  V+ +LLLQKS
Sbjct: 60   PSCVSSRKLQSVKALKEH-VDIASDPSDVQSWFERFEQLQNESDDEEDDSVEVLLLLQKS 118

Query: 435  MLEKQWNLSAETTKTTSRAR----KKIQVICSGTSARRRRMDSRKKVIGRKVSNPGQLNT 602
            MLEKQWNLSAE T T S       KK+ + CSGTSARRRRMDSR++V+ +K S+   ++ 
Sbjct: 119  MLEKQWNLSAEETLTASTQHEKNCKKMHIACSGTSARRRRMDSRQRVLAQK-SSATPISA 177

Query: 603  SKQWRSIISPELLQNSLKGYVKGVISDELLTHAQVVQLSQKIKAGXXXXXXXXXXXXXXG 782
            +K  RSI+ PELLQN LKGYVKG++S+ELLTH +V+QLS+KIK G              G
Sbjct: 178  TKPLRSILGPELLQNRLKGYVKGIVSEELLTHTEVLQLSKKIKVGLHVEEQKSRLKERLG 237

Query: 783  CEPSDEQLATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMADXXX 962
            CEPSD+QLA SL++SRTDLQS +IECSLARE+L+MSN+RLVMSIAQRYDNMGAEMAD   
Sbjct: 238  CEPSDDQLAVSLKMSRTDLQSTLIECSLARERLSMSNVRLVMSIAQRYDNMGAEMADLVQ 297

Query: 963  XXXXXXXXXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA 1142
                      EKFD SKG+KISTYVYWWIRQGVSR LVENSRTLRLPTHLHERLGLIRNA
Sbjct: 298  GGLIGLLRGIEKFDPSKGYKISTYVYWWIRQGVSRTLVENSRTLRLPTHLHERLGLIRNA 357

Query: 1143 KARLEEKGITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGLPGESLHSYI 1322
            K RLEEKGITPS++ IA +LNMSQKK+RNATEA SKV+SLDRE FPSLNGLPG +LHSYI
Sbjct: 358  KMRLEEKGITPSVNNIAASLNMSQKKVRNATEASSKVYSLDREVFPSLNGLPGATLHSYI 417

Query: 1323 ADNHIENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRRIGL 1502
            ADNH+ENNPWHGVD WALKDEV+ LI+ TLRERER+IIRLYYGLD+ECLTWEDIS+RIGL
Sbjct: 418  ADNHLENNPWHGVDVWALKDEVNNLISSTLREREREIIRLYYGLDSECLTWEDISKRIGL 477

Query: 1503 SRERVRQVGLVALEKLKHAARKRRLDAMLVQ 1595
            SRERVRQVGLVALEKLKHAARKRRLDAML++
Sbjct: 478  SRERVRQVGLVALEKLKHAARKRRLDAMLIK 508


>ref|XP_004235299.1| PREDICTED: RNA polymerase sigma factor sigA [Solanum lycopersicum]
          Length = 509

 Score =  668 bits (1723), Expect = 0.0
 Identities = 349/511 (68%), Positives = 411/511 (80%), Gaps = 11/511 (2%)
 Frame = +3

Query: 96   MIMATAVIGLSTGKRLLLSSTFYYSDLSEKLACTTD---PHHQNASTKNAITAKRSSNF- 263
            M+  TAVIGLS GKRLL SS+FYYSDL+EKL+C++D   P HQ  + KN I+AK+SS++ 
Sbjct: 1    MMATTAVIGLSAGKRLL-SSSFYYSDLNEKLSCSSDHSLPCHQVPTVKNVISAKKSSDYS 59

Query: 264  ---VSNRRSQSIRALKEHHVDTASNPCTLEPWLIHGSSLLNEEISDPEYLVDAILLLQKS 434
               VS+R+ QS++ALKEH VD AS+P  ++ W      L NE   + +  V+ +LLLQKS
Sbjct: 60   PSCVSSRKLQSVKALKEH-VDIASDPSDVQSWFERFEQLQNESDDEEDDSVEVLLLLQKS 118

Query: 435  MLEKQWNLSAETTKTTSRARKK----IQVICSGTSARRRRMDSRKKVIGRKVSNPGQLNT 602
            MLEKQWNLSAE T T S  RKK    + + CSGTSARRRRMDSR++V+ +K S+   ++ 
Sbjct: 119  MLEKQWNLSAEETLTASTQRKKNCKKMHIACSGTSARRRRMDSRQRVLAQK-SSATPISA 177

Query: 603  SKQWRSIISPELLQNSLKGYVKGVISDELLTHAQVVQLSQKIKAGXXXXXXXXXXXXXXG 782
            +K  RSI+ P+LLQN LKGYVKG++S+ELLTH +V+QLS+KIK G              G
Sbjct: 178  TKPLRSILGPDLLQNRLKGYVKGIVSEELLTHTEVLQLSKKIKVGLHVEEQKSRLKERLG 237

Query: 783  CEPSDEQLATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMADXXX 962
            CEPSD+QLA SL++SRTDLQS +IECSLARE+L+MSN+RLVMSIAQRYDNMGAEMAD   
Sbjct: 238  CEPSDDQLAVSLKMSRTDLQSTLIECSLARERLSMSNVRLVMSIAQRYDNMGAEMADLVQ 297

Query: 963  XXXXXXXXXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA 1142
                      EKFD SKG+KISTYVYWWIRQGVSR LVENSRTLRLPTHLHERLGLIRNA
Sbjct: 298  GGLIGLLRGIEKFDPSKGYKISTYVYWWIRQGVSRTLVENSRTLRLPTHLHERLGLIRNA 357

Query: 1143 KARLEEKGITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGLPGESLHSYI 1322
            K RLEEKGI PS++ IA +LNMSQKK+RNATEA SKV+SLDRE FPSLNGLPG +LHSYI
Sbjct: 358  KMRLEEKGINPSVNNIAASLNMSQKKVRNATEASSKVYSLDREVFPSLNGLPGTTLHSYI 417

Query: 1323 ADNHIENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRRIGL 1502
            ADNH+ENNPWHGVD WALKDEV+ LI+ TLRERER+IIRLYYGLD+ECLTWEDIS+RIGL
Sbjct: 418  ADNHLENNPWHGVDVWALKDEVNNLISSTLREREREIIRLYYGLDSECLTWEDISKRIGL 477

Query: 1503 SRERVRQVGLVALEKLKHAARKRRLDAMLVQ 1595
            SRERVRQVGLVALEKLKHAARKRRLDAML++
Sbjct: 478  SRERVRQVGLVALEKLKHAARKRRLDAMLIK 508


>ref|NP_001312542.1| RNA polymerase sigma factor sigA-like [Nicotiana tabacum]
 ref|XP_016474122.1| PREDICTED: RNA polymerase sigma factor sigA-like [Nicotiana tabacum]
 dbj|BAA88921.1| sigma factor [Nicotiana tabacum]
          Length = 508

 Score =  660 bits (1703), Expect = 0.0
 Identities = 351/511 (68%), Positives = 408/511 (79%), Gaps = 11/511 (2%)
 Frame = +3

Query: 96   MIMATAVIGLSTGKRLLLSSTFYYSDLSEKLACTTD---PHHQNASTKNAITAKRSSNF- 263
            M+   AVIGLS GKRLL SS+FYYSDL+EKL CT+D   P H   S KN ITAK+SS++ 
Sbjct: 1    MMSTAAVIGLSAGKRLL-SSSFYYSDLNEKLTCTSDHSLPCHHVPSIKNVITAKKSSDYS 59

Query: 264  ---VSNRRSQSIRALKEHHVDTASNPCTLEPWLIHGSSLLNEEISDPEYLVDAILLLQKS 434
               VS+R+SQS ++LKEH VD  ++P  +  W      L NE   D +  V+ +LLLQKS
Sbjct: 60   PSCVSSRKSQSAKSLKEH-VDITADPSDVPSWFEMYEQLQNES-DDEDESVEVLLLLQKS 117

Query: 435  MLEKQWNLSAETTKTTS----RARKKIQVICSGTSARRRRMDSRKKVIGRKVSNPGQLNT 602
            MLEKQWNLS E T T S    +  KK+ + CSGTSARRRRMDSR++V+ R  S+    + 
Sbjct: 118  MLEKQWNLSLEQTLTASPQHEKKSKKMHITCSGTSARRRRMDSRQRVLDRH-SSATPTSA 176

Query: 603  SKQWRSIISPELLQNSLKGYVKGVISDELLTHAQVVQLSQKIKAGXXXXXXXXXXXXXXG 782
            +K  RSII PELLQN LKGYVKGV+S+ELLTHA+V+QLS+KI+ G              G
Sbjct: 177  AKPLRSIIGPELLQNRLKGYVKGVVSEELLTHAEVLQLSKKIQVGLYLEEQKSRLKERLG 236

Query: 783  CEPSDEQLATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMADXXX 962
            CEPSD+QLA SL++SRTDLQS +IECSLARE+LAMSN+RLVMSIAQRYDN+GAEMAD   
Sbjct: 237  CEPSDDQLAVSLKMSRTDLQSTLIECSLARERLAMSNVRLVMSIAQRYDNVGAEMADLVQ 296

Query: 963  XXXXXXXXXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA 1142
                      EKFD SKG+KISTYVYWWIRQGVSRALVENSRTLRLPT+LHERL LIRNA
Sbjct: 297  GGLIGLLRGIEKFDPSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLSLIRNA 356

Query: 1143 KARLEEKGITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGLPGESLHSYI 1322
            KARLEEKGITPS++ IA +LNMSQKK+RNATEA SK++SLDREAFPSLNGLPGE+LHSYI
Sbjct: 357  KARLEEKGITPSVNNIAASLNMSQKKVRNATEASSKMYSLDREAFPSLNGLPGETLHSYI 416

Query: 1323 ADNHIENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRRIGL 1502
            ADNH+ENNPWHGVD WALKDEV+ LI+ TLR+RER+IIRLYYGLDNECLTWEDIS+RIGL
Sbjct: 417  ADNHLENNPWHGVDVWALKDEVNNLISSTLRDREREIIRLYYGLDNECLTWEDISKRIGL 476

Query: 1503 SRERVRQVGLVALEKLKHAARKRRLDAMLVQ 1595
            SRERVRQVGLVALEKLKHAARKR+LDAML++
Sbjct: 477  SRERVRQVGLVALEKLKHAARKRQLDAMLIK 507


>ref|XP_009771934.1| PREDICTED: RNA polymerase sigma factor sigA [Nicotiana sylvestris]
          Length = 508

 Score =  660 bits (1703), Expect = 0.0
 Identities = 351/511 (68%), Positives = 408/511 (79%), Gaps = 11/511 (2%)
 Frame = +3

Query: 96   MIMATAVIGLSTGKRLLLSSTFYYSDLSEKLACTTD---PHHQNASTKNAITAKRSSNF- 263
            M+   AVIGLS GKRLL SS+FYYSDL+EKL CT+D   P H   S KN ITAK+SS++ 
Sbjct: 1    MMSTAAVIGLSAGKRLL-SSSFYYSDLNEKLTCTSDHSLPCHHVPSIKNVITAKKSSDYS 59

Query: 264  ---VSNRRSQSIRALKEHHVDTASNPCTLEPWLIHGSSLLNEEISDPEYLVDAILLLQKS 434
               VS+R+SQS ++LKEH VD  ++P  +  W      L NE   D +  V+ +LLLQKS
Sbjct: 60   PSCVSSRKSQSTKSLKEH-VDITADPSDVPSWFEMYEQLQNES-DDEDESVEVLLLLQKS 117

Query: 435  MLEKQWNLSAETTKTTS----RARKKIQVICSGTSARRRRMDSRKKVIGRKVSNPGQLNT 602
            MLEKQWNLS E T T S    +  KK+ + CSGTSARRRRMDSR++V+ R  S+    + 
Sbjct: 118  MLEKQWNLSLEQTLTASPQHEKKSKKMHITCSGTSARRRRMDSRQRVLDRH-SSATPTSA 176

Query: 603  SKQWRSIISPELLQNSLKGYVKGVISDELLTHAQVVQLSQKIKAGXXXXXXXXXXXXXXG 782
            +K  RSII PELLQN LKGYVKGV+S+ELLTHA+V+QLS+KI+ G              G
Sbjct: 177  AKPLRSIIGPELLQNRLKGYVKGVVSEELLTHAEVLQLSKKIQVGLYLEEQKSRLKERLG 236

Query: 783  CEPSDEQLATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMADXXX 962
            CEPSD+QLA SL++SRTDLQS +IECSLARE+LAMSN+RLVMSIAQRYDN+GAEMAD   
Sbjct: 237  CEPSDDQLAVSLKMSRTDLQSTLIECSLARERLAMSNVRLVMSIAQRYDNVGAEMADLVQ 296

Query: 963  XXXXXXXXXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA 1142
                      EKFD SKG+KISTYVYWWIRQGVSRALVENSRTLRLPT+LHERL LIRNA
Sbjct: 297  GGLIGLLRGIEKFDPSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLSLIRNA 356

Query: 1143 KARLEEKGITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGLPGESLHSYI 1322
            KARLEEKGITPS++ IA +LNMSQKK+RNATEA SK++SLDREAFPSLNGLPGE+LHSYI
Sbjct: 357  KARLEEKGITPSVNNIAASLNMSQKKVRNATEASSKMYSLDREAFPSLNGLPGETLHSYI 416

Query: 1323 ADNHIENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRRIGL 1502
            ADNH+ENNPWHGVD WALKDEV+ LI+ TLR+RER+IIRLYYGLDNECLTWEDIS+RIGL
Sbjct: 417  ADNHLENNPWHGVDVWALKDEVNNLISSTLRDREREIIRLYYGLDNECLTWEDISKRIGL 476

Query: 1503 SRERVRQVGLVALEKLKHAARKRRLDAMLVQ 1595
            SRERVRQVGLVALEKLKHAARKR+LDAML++
Sbjct: 477  SRERVRQVGLVALEKLKHAARKRQLDAMLIK 507


>gb|EOY10268.1| Sigma factor A isoform 1 [Theobroma cacao]
          Length = 508

 Score =  660 bits (1703), Expect = 0.0
 Identities = 356/515 (69%), Positives = 414/515 (80%), Gaps = 14/515 (2%)
 Frame = +3

Query: 96   MIMATAVIGLSTGKRLLLSSTFYYSDLSEKLACTTD---PHHQNASTKNAITAKRSSNFV 266
            M+   AVIGL+TGKRLL SS+F YSD+ EKL+   D    HHQ +STK+ I AK+SSN  
Sbjct: 1    MMATAAVIGLTTGKRLL-SSSFSYSDIIEKLSYANDYGSSHHQTSSTKSLIVAKKSSNCS 59

Query: 267  -----SNRRSQSIRALKEHHVDTASNPCTLEPWLIHGSSLLNEEISDPEYLVDAILLLQK 431
                 SNRR+QSI+ALKEH VD+AS   T EP L  GS+ L  E  D +Y V+A+LLLQK
Sbjct: 60   QSLPSSNRRAQSIKALKEH-VDSASIVSTAEP-LFQGSNDLEVESYDLDYSVEALLLLQK 117

Query: 432  SMLEKQWNLSAETTKTTS----RARKKIQVICSGTSARRRRMDSRKKVI--GRKVSNPGQ 593
            SMLEKQW LS E T  T     +  KKI V CSG SAR+RR ++++K++   + +  P  
Sbjct: 118  SMLEKQWTLSFERTVFTESPSRKIHKKIPVTCSGVSARQRRFNTKRKILIQNKSIIQPN- 176

Query: 594  LNTSKQWRSIISPELLQNSLKGYVKGVISDELLTHAQVVQLSQKIKAGXXXXXXXXXXXX 773
               +KQ RS+ISPELLQ+ LKGYVKGV+SDELL+HA+VV+LS+KIKAG            
Sbjct: 177  ---AKQLRSLISPELLQSRLKGYVKGVVSDELLSHAEVVRLSKKIKAGLSLEEHRLRLKE 233

Query: 774  XXGCEPSDEQLATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMAD 953
              GCEPSDEQLATSL+ISR +L+SK+IECSLAREKLAMSN+RLVMSIAQRYDNMGAEM+D
Sbjct: 234  RLGCEPSDEQLATSLKISRAELRSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSD 293

Query: 954  XXXXXXXXXXXXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI 1133
                         EKFDSSKG+KISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI
Sbjct: 294  LIQGGLIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI 353

Query: 1134 RNAKARLEEKGITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGLPGESLH 1313
            RNAK RLEEKGITP+ID+IAE+LNMSQKK+RNATEA+SKVFSLDR+AFPSLNGLPGE+ H
Sbjct: 354  RNAKIRLEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHH 413

Query: 1314 SYIADNHIENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRR 1493
            SYIADNH+EN PWHGVDEWALKDEV++LIT+TL ERER+IIRLYYGLD E LTWEDIS+R
Sbjct: 414  SYIADNHVENIPWHGVDEWALKDEVNRLITITLGEREREIIRLYYGLDKESLTWEDISKR 473

Query: 1494 IGLSRERVRQVGLVALEKLKHAARKRRLDAMLVQH 1598
            IGLSRERVRQVGLVALEKLKHAARK++++AMLV+H
Sbjct: 474  IGLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 508


>ref|XP_021656961.1| RNA polymerase sigma factor sigA-like isoform X1 [Hevea brasiliensis]
 ref|XP_021656962.1| RNA polymerase sigma factor sigA-like isoform X1 [Hevea brasiliensis]
          Length = 509

 Score =  660 bits (1703), Expect = 0.0
 Identities = 357/515 (69%), Positives = 412/515 (80%), Gaps = 14/515 (2%)
 Frame = +3

Query: 96   MIMATAVIGLSTGKRLLLSSTFYYSDLSEKLACTTD---PHHQNASTKNAITAKRSSNF- 263
            M++  AV+GLS GK+ L SSTFYYSDL+EKL    D    H+Q ASTKN I AK+SSN+ 
Sbjct: 1    MMVTAAVVGLSAGKKFL-SSTFYYSDLTEKLFNVNDNGLTHYQIASTKNVIVAKKSSNYG 59

Query: 264  ----VSNRRSQSIRALKEHHVDTASNPCTLEPWL--IHGSSLLNEEISDPEYLVDAILLL 425
                 SNR +QSI+ALKEH +DTAS P T        H    + E+ISD +Y V+A+LLL
Sbjct: 60   PSYPSSNRNTQSIKALKEH-MDTASAPSTAATRFKTFHD---IEEDISDLDYSVEALLLL 115

Query: 426  QKSMLEKQWNLSAETT----KTTSRARKKIQVICSGTSARRRRMDSRKKVIGRKVSNPGQ 593
            QKSMLEKQWNLS E T     T  +++KKI V CSG SAR+RR+++R+K + +  S   Q
Sbjct: 116  QKSMLEKQWNLSFERTASSDSTNKKSQKKIPVTCSGLSARQRRINTRRKNLSQSKSIV-Q 174

Query: 594  LNTSKQWRSIISPELLQNSLKGYVKGVISDELLTHAQVVQLSQKIKAGXXXXXXXXXXXX 773
             +T KQ +S +SPELLQN LKGYVKGV+S+ELLTHA+VV LS+ IKAG            
Sbjct: 175  ASTFKQLKSAVSPELLQNRLKGYVKGVVSEELLTHAEVVCLSRIIKAGLSMEEHRSRLKE 234

Query: 774  XXGCEPSDEQLATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMAD 953
              GCEPSDE+LATSLRISR +LQSK+I CSLAREKLAMSN+RLVMSIAQRYDNMGAEMAD
Sbjct: 235  RLGCEPSDEELATSLRISRAELQSKLIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMAD 294

Query: 954  XXXXXXXXXXXXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI 1133
                         EKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP HLHERLGLI
Sbjct: 295  LVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLI 354

Query: 1134 RNAKARLEEKGITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGLPGESLH 1313
            RNAK RL EKG+TPSID+IAE+LNMSQKK+RNATEAISKVFSLDREAFPSLNGLPGE+ H
Sbjct: 355  RNAKIRLAEKGVTPSIDRIAESLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETHH 414

Query: 1314 SYIADNHIENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRR 1493
            SY+ADN +ENNPWHGVDEWALK+EV+KLI +TL+ERER+IIRLYYGLDNE LTWEDIS+R
Sbjct: 415  SYVADNCLENNPWHGVDEWALKEEVNKLINVTLQEREREIIRLYYGLDNESLTWEDISKR 474

Query: 1494 IGLSRERVRQVGLVALEKLKHAARKRRLDAMLVQH 1598
            IGLSRER+RQVGLVALEKLKHAARK++L+AMLV+H
Sbjct: 475  IGLSRERIRQVGLVALEKLKHAARKKKLEAMLVKH 509


>ref|XP_021624392.1| RNA polymerase sigma factor sigA-like [Manihot esculenta]
 ref|XP_021624393.1| RNA polymerase sigma factor sigA-like [Manihot esculenta]
 gb|OAY41811.1| hypothetical protein MANES_09G130800 [Manihot esculenta]
 gb|OAY41812.1| hypothetical protein MANES_09G130800 [Manihot esculenta]
          Length = 509

 Score =  660 bits (1703), Expect = 0.0
 Identities = 360/515 (69%), Positives = 413/515 (80%), Gaps = 14/515 (2%)
 Frame = +3

Query: 96   MIMATAVIGLSTGKRLLLSSTFYYSDLSEKLACTTD---PHHQNASTKNAITAKRSSNF- 263
            M+   AVIGLS GKRLL SS+FYYSDL++KL    D    H+Q ASTKN I AK+SSN+ 
Sbjct: 1    MMTTAAVIGLSAGKRLL-SSSFYYSDLTDKLFNVNDHGLTHYQIASTKNVIGAKKSSNYG 59

Query: 264  ----VSNRRSQSIRALKEHHVDTASNPCTLEPWL--IHGSSLLNEEISDPEYLVDAILLL 425
                 SNR +QSI+ALKEH VDTAS+  T E      H    + E+ISD +Y V+A+LLL
Sbjct: 60   PTYPSSNRNTQSIKALKEH-VDTASSSSTTETRFKTFHD---IEEDISDLDYSVEALLLL 115

Query: 426  QKSMLEKQWNLSAETT----KTTSRARKKIQVICSGTSARRRRMDSRKKVIGRKVSNPGQ 593
            QKSMLEKQWNLS E T     T  ++ KKI V CSG SAR+RR+++R+K +G+  +   Q
Sbjct: 116  QKSMLEKQWNLSFERTASSDSTNRKSEKKIPVTCSGLSARQRRINTRRKNLGQNKATV-Q 174

Query: 594  LNTSKQWRSIISPELLQNSLKGYVKGVISDELLTHAQVVQLSQKIKAGXXXXXXXXXXXX 773
             +T KQ +S +SPELLQN LKGYVKGV+S+ELLTHA+VV+LS+ IKAG            
Sbjct: 175  ASTFKQLQSAVSPELLQNRLKGYVKGVVSEELLTHAEVVRLSRIIKAGLSLEDHKSRLKE 234

Query: 774  XXGCEPSDEQLATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMAD 953
              GCEPSDEQLATSLRISR +LQSK+I CSLAREKLAMSN+RLVMSIAQRYD+MGAEMAD
Sbjct: 235  RLGCEPSDEQLATSLRISRAELQSKLIACSLAREKLAMSNVRLVMSIAQRYDHMGAEMAD 294

Query: 954  XXXXXXXXXXXXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI 1133
                         EKFDSSKGFKISTYVYWWIRQGVSRALV+NSRTLRLP HLHERLGLI
Sbjct: 295  LVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHERLGLI 354

Query: 1134 RNAKARLEEKGITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGLPGESLH 1313
            RNAK RLEEKG+TPSID+IAE+L MSQKK+RNATEAISKVFSLDREAFPSLNGLPGE+ H
Sbjct: 355  RNAKIRLEEKGVTPSIDRIAESLKMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETHH 414

Query: 1314 SYIADNHIENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRR 1493
            SYIADN ++NNPWH VDEWALKDEV++LI LTLRERER+IIRLYYGLDNE LTWEDIS+R
Sbjct: 415  SYIADNCLDNNPWHVVDEWALKDEVNRLIDLTLREREREIIRLYYGLDNESLTWEDISKR 474

Query: 1494 IGLSRERVRQVGLVALEKLKHAARKRRLDAMLVQH 1598
            IGLSRERVRQVGLVALEKLKHAARK++L+AMLV+H
Sbjct: 475  IGLSRERVRQVGLVALEKLKHAARKKKLEAMLVKH 509


>ref|XP_007029766.2| PREDICTED: RNA polymerase sigma factor sigA isoform X1 [Theobroma
            cacao]
          Length = 508

 Score =  659 bits (1700), Expect = 0.0
 Identities = 356/515 (69%), Positives = 414/515 (80%), Gaps = 14/515 (2%)
 Frame = +3

Query: 96   MIMATAVIGLSTGKRLLLSSTFYYSDLSEKLACTTD---PHHQNASTKNAITAKRSSNFV 266
            M+   AVIGL+TGKRLL SS+F YSD+ EKL+   D    HHQ +STK+ I AK+SSN  
Sbjct: 1    MMATAAVIGLTTGKRLL-SSSFSYSDIIEKLSYANDYGSSHHQTSSTKSLIVAKKSSNCS 59

Query: 267  -----SNRRSQSIRALKEHHVDTASNPCTLEPWLIHGSSLLNEEISDPEYLVDAILLLQK 431
                 SNRR+QSI+ALKEH VD+AS   T EP L  GS+ L  E  D +Y V+A+LLLQK
Sbjct: 60   QSLPSSNRRAQSIKALKEH-VDSASIVSTAEP-LFQGSNHLEVESYDLDYSVEALLLLQK 117

Query: 432  SMLEKQWNLSAETTKTTS----RARKKIQVICSGTSARRRRMDSRKKVIGRKVS--NPGQ 593
            SMLEKQW LS E T  T     +  KKI V CSG SAR+RR ++++K++ +  S   P  
Sbjct: 118  SMLEKQWTLSFERTVFTESPSRKIHKKIPVTCSGVSARQRRFNTKRKILSQNKSIIQPN- 176

Query: 594  LNTSKQWRSIISPELLQNSLKGYVKGVISDELLTHAQVVQLSQKIKAGXXXXXXXXXXXX 773
               +KQ RS+ISPELLQ+ LKGYVKGV+S+ELL+HA+VV+LS+KIKAG            
Sbjct: 177  ---AKQLRSLISPELLQSRLKGYVKGVVSEELLSHAEVVRLSKKIKAGLSLEEHRLRLKE 233

Query: 774  XXGCEPSDEQLATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMAD 953
              GCEPSDEQLATSL+ISR +L+SK+IECSLAREKLAMSN+RLVMSIAQRYDNMGAEM+D
Sbjct: 234  RLGCEPSDEQLATSLKISRAELRSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSD 293

Query: 954  XXXXXXXXXXXXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI 1133
                         EKFDSSKG+KISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI
Sbjct: 294  LIQGGLIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI 353

Query: 1134 RNAKARLEEKGITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGLPGESLH 1313
            RNAK RLEEKGITP+ID+IAE+LNMSQKK+RNATEA+SKVFSLDR+AFPSLNGLPGE+ H
Sbjct: 354  RNAKIRLEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHH 413

Query: 1314 SYIADNHIENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRR 1493
            SYIADNH+EN PWHGVDEWALKDEV++LIT+TL ERER+IIRLYYGLD E LTWEDIS+R
Sbjct: 414  SYIADNHVENIPWHGVDEWALKDEVNRLITITLGEREREIIRLYYGLDKESLTWEDISKR 473

Query: 1494 IGLSRERVRQVGLVALEKLKHAARKRRLDAMLVQH 1598
            IGLSRERVRQVGLVALEKLKHAARK++++AMLV+H
Sbjct: 474  IGLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 508


>ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA [Citrus sinensis]
 ref|XP_006484699.1| PREDICTED: RNA polymerase sigma factor sigA [Citrus sinensis]
 ref|XP_006484700.1| PREDICTED: RNA polymerase sigma factor sigA [Citrus sinensis]
          Length = 508

 Score =  657 bits (1695), Expect = 0.0
 Identities = 353/513 (68%), Positives = 408/513 (79%), Gaps = 12/513 (2%)
 Frame = +3

Query: 96   MIMATAVIGLSTGKRLLLSSTFYYSDLSEKLACTTD---PHHQNASTKNAITAKRSSNF- 263
            M+   AVIGLS GKRLL SS+FYYSD+SEK +   D    + Q  STKN + AK+SSN+ 
Sbjct: 1    MMATAAVIGLSAGKRLL-SSSFYYSDISEKFSYINDLGSANSQVGSTKNVVAAKKSSNYN 59

Query: 264  ----VSNRRSQSIRALKEHHVDTASNPCTLEPWLIHGSSLLNEEISDPEYLVDAILLLQK 431
                 SNR++Q I+ALKEH VDT +   T EPW    +S+  EE S+ +Y V+A+LLLQK
Sbjct: 60   PSFPSSNRQTQPIKALKEH-VDT-NFASTAEPWAEPPNSI-EEESSELDYSVEALLLLQK 116

Query: 432  SMLEKQWNLSAETTKTTS----RARKKIQVICSGTSARRRRMDSRKKVIGRKVSNPGQLN 599
            SMLEKQWNLS E T  T     +  KK+ V CSG SAR+RR++S+KK++ +  S P Q N
Sbjct: 117  SMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSVPQQ-N 175

Query: 600  TSKQWRSIISPELLQNSLKGYVKGVISDELLTHAQVVQLSQKIKAGXXXXXXXXXXXXXX 779
             SKQ RS+ISPEL+QN LKGYVKGV+S+ELLTHA+VV+LS+KIK G              
Sbjct: 176  GSKQLRSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERL 235

Query: 780  GCEPSDEQLATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMADXX 959
            GCEPS EQLA SLRISR +LQS ++ECSLAREKL MSN+RLVMSIAQRYDNMGA+MAD  
Sbjct: 236  GCEPSMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLV 295

Query: 960  XXXXXXXXXXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRN 1139
                       EKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP HLHERLGLIRN
Sbjct: 296  QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRN 355

Query: 1140 AKARLEEKGITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGLPGESLHSY 1319
            AK RLEEKG+TPS+D+IAE LNMSQKK+RNATEAI KVFSLDREAFPSLNGLPGE+ HSY
Sbjct: 356  AKLRLEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSY 415

Query: 1320 IADNHIENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRRIG 1499
            IADN +ENNPWHGVD+WALKDEV+KLI +TL ERER+IIRLYYGLD ECLTWEDIS+RIG
Sbjct: 416  IADNRVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIG 475

Query: 1500 LSRERVRQVGLVALEKLKHAARKRRLDAMLVQH 1598
            LSRERVRQVGLVALEKLKHAARK++++AMLV+H
Sbjct: 476  LSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 508


>gb|OMO87271.1| RNA polymerase sigma-70 [Corchorus capsularis]
          Length = 508

 Score =  655 bits (1689), Expect = 0.0
 Identities = 352/514 (68%), Positives = 413/514 (80%), Gaps = 14/514 (2%)
 Frame = +3

Query: 96   MIMATAVIGLSTGKRLLLSSTFYYSDLSEKLACTTD---PHHQNASTKNAITAKRSSNFV 266
            M+  TAVIGLSTGKRLL SS+F YSD+ EKL+   D    HH  +STK+ I AK+SSN  
Sbjct: 1    MMATTAVIGLSTGKRLL-SSSFSYSDIIEKLSYANDYGCSHHPTSSTKSLIVAKKSSNCS 59

Query: 267  -----SNRRSQSIRALKEHHVDTASNPCTLEPWLIHGSSLLNEEISDPEYLVDAILLLQK 431
                 SNRR+QSI+ALKEH VD+A+   T EPW   GS+ L+EE  D +Y VDA+LLLQK
Sbjct: 60   QNLPSSNRRTQSIKALKEH-VDSATVISTAEPWF-QGSNDLDEENYDLDYSVDALLLLQK 117

Query: 432  SMLEKQWNLSAETTKTTS----RARKKIQVICSGTSARRRRMDSRKKVI--GRKVSNPGQ 593
            SMLEKQW LS E T  T     +  KKI V CSG SAR+RR+++++K++   + V  P  
Sbjct: 118  SMLEKQWTLSFERTVFTESPGRKTHKKIPVTCSGVSARQRRLNTKRKLLRQNKSVIQP-- 175

Query: 594  LNTSKQWRSIISPELLQNSLKGYVKGVISDELLTHAQVVQLSQKIKAGXXXXXXXXXXXX 773
              ++KQ RS+ISPEL Q+ L GYVKGV+S+ELL+HA+VV+LS+KIK G            
Sbjct: 176  --SAKQLRSLISPELFQSRLNGYVKGVVSEELLSHAEVVRLSKKIKVGLSLEDHRSRLTE 233

Query: 774  XXGCEPSDEQLATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMAD 953
              GCEPSDEQLATSL+I+R +L+SK+IECSLAREKLAMSN+RLVMSIAQRYDNMGAEM+D
Sbjct: 234  RLGCEPSDEQLATSLKITRAELRSKVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSD 293

Query: 954  XXXXXXXXXXXXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI 1133
                         EKFDSSKG+KISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI
Sbjct: 294  LIQGGLIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI 353

Query: 1134 RNAKARLEEKGITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGLPGESLH 1313
            RNAK RLEEKGITP+ID+IAE+LNMSQKK+RNATEA+SKVFSLDR+AFPSLNGLPGE+ H
Sbjct: 354  RNAKNRLEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHH 413

Query: 1314 SYIADNHIENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRR 1493
            SYI DNH+ENNPWHGVDEWALKDEV++LIT+TL ERER+IIRLYYGLD   LTWEDIS+R
Sbjct: 414  SYIPDNHVENNPWHGVDEWALKDEVNRLITITLGEREREIIRLYYGLDKGSLTWEDISKR 473

Query: 1494 IGLSRERVRQVGLVALEKLKHAARKRRLDAMLVQ 1595
            IGLSRERVRQVGLVALEKLKHAARK++++AMLV+
Sbjct: 474  IGLSRERVRQVGLVALEKLKHAARKKKMEAMLVK 507


>ref|XP_019259164.1| PREDICTED: RNA polymerase sigma factor sigA-like [Nicotiana
            attenuata]
 gb|OIT40023.1| rna polymerase sigma factor siga [Nicotiana attenuata]
          Length = 508

 Score =  654 bits (1688), Expect = 0.0
 Identities = 349/511 (68%), Positives = 404/511 (79%), Gaps = 11/511 (2%)
 Frame = +3

Query: 96   MIMATAVIGLSTGKRLLLSSTFYYSDLSEKLACTTD---PHHQNASTKNAITAKRSSNF- 263
            M+   AVIGLS GKRLL SS+FYYSDL EKL CT+D   P HQ  S KN I AK+SS + 
Sbjct: 1    MMATAAVIGLSAGKRLL-SSSFYYSDLIEKLNCTSDHSLPCHQVPSVKNVINAKKSSGYS 59

Query: 264  ---VSNRRSQSIRALKEHHVDTASNPCTLEPWLIHGSSLLNEEISDPEYLVDAILLLQKS 434
               VS+R+ QS +ALKEH VD  ++P  +  W      L NE   D +  V+ +LLLQKS
Sbjct: 60   HSCVSSRKPQSAKALKEH-VDVTADPSDVPSWFEMFEQLQNES-DDEDDSVEVLLLLQKS 117

Query: 435  MLEKQWNLSAETTKTTS----RARKKIQVICSGTSARRRRMDSRKKVIGRKVSNPGQLNT 602
            MLEKQWNLS E T T S    +  KK+ + CSGTSARRRRMDSR++V+ R  S+    + 
Sbjct: 118  MLEKQWNLSLEQTLTASPQHEKKSKKMHITCSGTSARRRRMDSRQRVLDRH-SSATPTSA 176

Query: 603  SKQWRSIISPELLQNSLKGYVKGVISDELLTHAQVVQLSQKIKAGXXXXXXXXXXXXXXG 782
            +K  RSII PELLQN LKGYVKGV+S+ELLTHA+V+QLS+KI+ G              G
Sbjct: 177  AKPLRSIIGPELLQNRLKGYVKGVVSEELLTHAEVLQLSKKIQVGLYLEEQKSRLKERLG 236

Query: 783  CEPSDEQLATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMADXXX 962
            CEPSD+QLA SL++SRTDLQS +IECSLARE+LAMSN+RLVMSIAQRYDN+GAEMAD   
Sbjct: 237  CEPSDDQLAVSLKMSRTDLQSTLIECSLARERLAMSNVRLVMSIAQRYDNVGAEMADLVQ 296

Query: 963  XXXXXXXXXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA 1142
                      EKFD SKG+KISTYVYWWIRQGVSRALVENSRTLRLPT+LHERL LIRNA
Sbjct: 297  GGLIGLLRGIEKFDPSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLSLIRNA 356

Query: 1143 KARLEEKGITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGLPGESLHSYI 1322
            K RLEEKGITPS++ IA +LNMSQKK++NATEA SK++SLDREAFPSLNGLPGE+LHSYI
Sbjct: 357  KTRLEEKGITPSVNNIAASLNMSQKKVKNATEASSKMYSLDREAFPSLNGLPGETLHSYI 416

Query: 1323 ADNHIENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRRIGL 1502
            ADNH+ENNPWHGVD WALKDEV+ LI+ TLR+RER+IIRLYYGLDNECLTWEDIS+RIGL
Sbjct: 417  ADNHLENNPWHGVDIWALKDEVNNLISSTLRDREREIIRLYYGLDNECLTWEDISKRIGL 476

Query: 1503 SRERVRQVGLVALEKLKHAARKRRLDAMLVQ 1595
            SRERVRQVGLVALEKLKHAARKR+LDAML++
Sbjct: 477  SRERVRQVGLVALEKLKHAARKRQLDAMLIK 507


>emb|CDP04910.1| unnamed protein product [Coffea canephora]
          Length = 503

 Score =  654 bits (1687), Expect = 0.0
 Identities = 354/508 (69%), Positives = 406/508 (79%), Gaps = 10/508 (1%)
 Frame = +3

Query: 102  MATA-VIGLSTGKRLLLSSTFYYSDL-SEKLACTTDPHHQNASTKNAITAKRSSNF---- 263
            MATA VIGLS GKRLL SS  YYSDL S+KL+CT D H    S+ + + AKRSSNF    
Sbjct: 1    MATAAVIGLSPGKRLL-SSASYYSDLFSDKLSCTCD-HFLPVSSNSVLAAKRSSNFSPKF 58

Query: 264  VSNRRSQSIRALKEHHVDTASNPCTLEPWLIHGSSLLNEEISDPEYLVDAILLLQKSMLE 443
            +S  ++Q   ALKEH  +TA +  +++PWL H ++  +EE  DPE+ + A+LLLQKSMLE
Sbjct: 59   LSRHKTQPTYALKEH-AETAPDLSSIQPWL-HVNA--DEEFLDPEFSMQALLLLQKSMLE 114

Query: 444  KQWNLSAET----TKTTSRARKKIQVICSGTSARRRRMDSRKKVIGRKVSNPGQLNTSKQ 611
            KQWNLSAE     T T    +  +QV  SG+SARRRR+DSR+  +  + S+  QL  S+ 
Sbjct: 115  KQWNLSAENDYLVTGTPPTGKTCVQVTSSGSSARRRRIDSRRHPLSSRKSSVRQLRLSRH 174

Query: 612  WRSIISPELLQNSLKGYVKGVISDELLTHAQVVQLSQKIKAGXXXXXXXXXXXXXXGCEP 791
             RSIISPELLQN L GYVKGV+S+ELLTH +VVQLS+KIK G              GCEP
Sbjct: 175  LRSIISPELLQNRLNGYVKGVVSEELLTHTEVVQLSEKIKQGLCFEEQKARLRKRLGCEP 234

Query: 792  SDEQLATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMADXXXXXX 971
            S+EQLATSL+I+R DLQSK IECSLARE+LAMSN+RLVMSIAQRYDNMGAEMAD      
Sbjct: 235  SEEQLATSLKITRADLQSKFIECSLARERLAMSNVRLVMSIAQRYDNMGAEMADLIQGGL 294

Query: 972  XXXXXXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKAR 1151
                   EK+DSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERL LIRNAK R
Sbjct: 295  IGLLRGIEKYDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIR 354

Query: 1152 LEEKGITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGLPGESLHSYIADN 1331
            LEEKGITPS+DKIAE+LNMSQKK+RNATEA+ KV SLDREAFPSLNGLPGE+LHSYIADN
Sbjct: 355  LEEKGITPSVDKIAESLNMSQKKVRNATEAVCKVISLDREAFPSLNGLPGETLHSYIADN 414

Query: 1332 HIENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRRIGLSRE 1511
             +ENNPWHGVD+WALKDEV+KLIT TLRERERDIIRLYYGL+NECLTWEDIS+RIGLSRE
Sbjct: 415  RLENNPWHGVDQWALKDEVNKLITSTLRERERDIIRLYYGLENECLTWEDISKRIGLSRE 474

Query: 1512 RVRQVGLVALEKLKHAARKRRLDAMLVQ 1595
            RVRQVGLVALEKLK+AARKRRL+AM+ +
Sbjct: 475  RVRQVGLVALEKLKYAARKRRLEAMIAR 502


>gb|KDO48032.1| hypothetical protein CISIN_1g010521mg [Citrus sinensis]
 gb|KDO48033.1| hypothetical protein CISIN_1g010521mg [Citrus sinensis]
          Length = 508

 Score =  653 bits (1685), Expect = 0.0
 Identities = 352/513 (68%), Positives = 407/513 (79%), Gaps = 12/513 (2%)
 Frame = +3

Query: 96   MIMATAVIGLSTGKRLLLSSTFYYSDLSEKLACTTD---PHHQNASTKNAITAKRSSNF- 263
            M+   AVIGLS GKRLL SS+FYYSD+SEK +   D    + Q  STKN + AK+SSN+ 
Sbjct: 1    MMATAAVIGLSAGKRLL-SSSFYYSDISEKFSYINDLGSANSQVGSTKNVVAAKKSSNYN 59

Query: 264  ----VSNRRSQSIRALKEHHVDTASNPCTLEPWLIHGSSLLNEEISDPEYLVDAILLLQK 431
                 SNR++Q I+ALKEH VDT +   T EPW    +S+  EE S+ +Y V+A+LLLQK
Sbjct: 60   PSFPSSNRQTQPIKALKEH-VDT-NFASTAEPWAEPPNSI-EEESSELDYSVEALLLLQK 116

Query: 432  SMLEKQWNLSAETTKTTS----RARKKIQVICSGTSARRRRMDSRKKVIGRKVSNPGQLN 599
            SMLEKQWNLS E T  T     +  KK+ V CSG SAR+RR++S+KK++ +  S   Q N
Sbjct: 117  SMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSILQQ-N 175

Query: 600  TSKQWRSIISPELLQNSLKGYVKGVISDELLTHAQVVQLSQKIKAGXXXXXXXXXXXXXX 779
             SKQ RS+ISPEL+QN LKGYVKGV+S+ELLTHA+VV+LS+KIK G              
Sbjct: 176  GSKQLRSMISPELIQNRLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERL 235

Query: 780  GCEPSDEQLATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMADXX 959
            GCEPS EQLA SLRISR +LQS ++ECSLAREKL MSN+RLVMSIAQRYDNMGA+MAD  
Sbjct: 236  GCEPSMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLV 295

Query: 960  XXXXXXXXXXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRN 1139
                       EKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP HLHERLGLIRN
Sbjct: 296  QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRN 355

Query: 1140 AKARLEEKGITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGLPGESLHSY 1319
            AK RLEEKG+TPS+D+IAE LNMSQKK+RNATEAI KVFSLDREAFPSLNGLPGE+ HSY
Sbjct: 356  AKLRLEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSY 415

Query: 1320 IADNHIENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRRIG 1499
            IADN +ENNPWHGVD+WALKDEV+KLI +TL ERER+IIRLYYGLD ECLTWEDIS+RIG
Sbjct: 416  IADNRVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIG 475

Query: 1500 LSRERVRQVGLVALEKLKHAARKRRLDAMLVQH 1598
            LSRERVRQVGLVALEKLKHAARK++++AMLV+H
Sbjct: 476  LSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 508


>gb|OMP05985.1| RNA polymerase sigma-70 [Corchorus olitorius]
          Length = 507

 Score =  652 bits (1683), Expect = 0.0
 Identities = 354/513 (69%), Positives = 416/513 (81%), Gaps = 15/513 (2%)
 Frame = +3

Query: 102  MATA-VIGLSTGKRLLLSSTFYYSDLSEKLACTTD---PHHQNASTKNAITAKRSSNFV- 266
            MATA VIGLSTGKRLL SS+F YSD+ EKL+   D    HH  +STK+ I AK+SSN   
Sbjct: 1    MATAAVIGLSTGKRLL-SSSFSYSDIIEKLSYANDYGCSHHPTSSTKSLIVAKKSSNCSQ 59

Query: 267  ----SNRRSQSIRALKEHHVDTASNPCTLEPWLIHGSSLLNEEISDPEYLVDAILLLQKS 434
                SNRR+QSI+ALKEH VD+A+   T EPW   GS+ L+EE  D +Y V+A+LLLQKS
Sbjct: 60   SLPSSNRRTQSIKALKEH-VDSATVISTAEPWF-QGSNDLDEESYDLDYSVEALLLLQKS 117

Query: 435  MLEKQWNLSAETTKTTS----RARKKIQVICSGTSARRRRMDSRKKVIGRKVS--NPGQL 596
            MLEKQW LS E T  T     +  KKI V CSG SAR+RR+++++K++ +K S   P   
Sbjct: 118  MLEKQWTLSFERTVFTESPSRKTLKKIPVTCSGVSARQRRLNTKRKLLRQKKSVIQP--- 174

Query: 597  NTSKQWRSIISPELLQNSLKGYVKGVISDELLTHAQVVQLSQKIKAGXXXXXXXXXXXXX 776
             ++KQ RS+ISPELLQ+ LKGYVKGV+S+ELL+HA+VV+LS+KIK G             
Sbjct: 175  -SAKQLRSLISPELLQSRLKGYVKGVVSEELLSHAEVVRLSKKIKVGLSLEDHRSRLTER 233

Query: 777  XGCEPSDEQLATSLRISRTDLQSKMIECSLAREKLAMSNIRLVMSIAQRYDNMGAEMADX 956
             GCEPSDEQLATSL+I+R +L+SK+IECSLAREKLAMSN+RLVMSIAQRYDNMGAEM+D 
Sbjct: 234  LGCEPSDEQLATSLKITRAELRSKVIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDL 293

Query: 957  XXXXXXXXXXXXEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIR 1136
                        EKFDSSKG+KISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIR
Sbjct: 294  IQGGLIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIR 353

Query: 1137 NAKARLEEKGITPSIDKIAENLNMSQKKIRNATEAISKVFSLDREAFPSLNGLPGESLHS 1316
            NAK RLEEKGITP+ID+IAE+LNMSQKK+RNATEA+SKVFSLDR+AFPSLNGLPGE+ HS
Sbjct: 354  NAKNRLEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHS 413

Query: 1317 YIADNHIENNPWHGVDEWALKDEVDKLITLTLRERERDIIRLYYGLDNECLTWEDISRRI 1496
            YI DNH+ENNPWHGVD+WALKDEV++LIT+TL  RER+IIRLYYGLD E LTWEDIS+RI
Sbjct: 414  YIPDNHVENNPWHGVDDWALKDEVNRLITITLGIREREIIRLYYGLDKESLTWEDISKRI 473

Query: 1497 GLSRERVRQVGLVALEKLKHAARKRRLDAMLVQ 1595
            GLSRERVRQVGLVALEKLKHAARK++++AMLV+
Sbjct: 474  GLSRERVRQVGLVALEKLKHAARKKKMEAMLVK 506