BLASTX nr result

ID: Rehmannia32_contig00007275 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00007275
         (361 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011096582.1| pyruvate dehydrogenase E1 component subunit ...    77   7e-14
ref|XP_012853974.1| PREDICTED: pyruvate dehydrogenase E1 compone...    73   1e-12
gb|PIN04065.1| Pyruvate dehydrogenase E1, beta subunit [Handroan...    68   9e-11
gb|AJQ20642.1| Pyruvate Dehydrogenase beta subunit [Salvia milti...    56   1e-06

>ref|XP_011096582.1| pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic
           [Sesamum indicum]
          Length = 405

 Score = 76.6 bits (187), Expect = 7e-14
 Identities = 44/74 (59%), Positives = 45/74 (60%)
 Frame = -1

Query: 223 MAAPVMQGVGATTALSSVNYKNYCFASRRSLPERKTSFFFIHCDXXXXXXXXXXXXXXXX 44
           MA+  MQGVGATTALSS NYKN CFAS RSLPERK SFF I  D                
Sbjct: 1   MASAFMQGVGATTALSSANYKNSCFASPRSLPERKGSFFVIRSDGSLSSGLNPRNSRRGT 60

Query: 43  XXXXAVATKQDNVT 2
               AVATKQDNVT
Sbjct: 61  LSTNAVATKQDNVT 74


>ref|XP_012853974.1| PREDICTED: pyruvate dehydrogenase E1 component subunit beta-3,
           chloroplastic-like [Erythranthe guttata]
 gb|EYU23494.1| hypothetical protein MIMGU_mgv1a007504mg [Erythranthe guttata]
          Length = 405

 Score = 73.2 bits (178), Expect = 1e-12
 Identities = 41/74 (55%), Positives = 45/74 (60%)
 Frame = -1

Query: 223 MAAPVMQGVGATTALSSVNYKNYCFASRRSLPERKTSFFFIHCDXXXXXXXXXXXXXXXX 44
           MAA +MQ VGATTA+SSVNYKN  +ASRRS PERK S   IHCD                
Sbjct: 1   MAAAIMQSVGATTAISSVNYKNSGYASRRSFPERKRSCLSIHCDGSLTFGMNNQNNRSAG 60

Query: 43  XXXXAVATKQDNVT 2
               AVA+KQDNVT
Sbjct: 61  LSTNAVASKQDNVT 74


>gb|PIN04065.1| Pyruvate dehydrogenase E1, beta subunit [Handroanthus
           impetiginosus]
          Length = 405

 Score = 67.8 bits (164), Expect = 9e-11
 Identities = 38/73 (52%), Positives = 42/73 (57%)
 Frame = -1

Query: 223 MAAPVMQGVGATTALSSVNYKNYCFASRRSLPERKTSFFFIHCDXXXXXXXXXXXXXXXX 44
           MAA +MQGV AT  LSS NYK  CFA+ RSLPERK S F IHCD                
Sbjct: 1   MAAAIMQGVRATKDLSSANYKRSCFATPRSLPERKRSSFVIHCDGNLTSGLNNSSSRSVR 60

Query: 43  XXXXAVATKQDNV 5
               AV+TKQ+NV
Sbjct: 61  LSANAVSTKQENV 73


>gb|AJQ20642.1| Pyruvate Dehydrogenase beta subunit [Salvia miltiorrhiza]
          Length = 402

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 36/75 (48%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
 Frame = -1

Query: 223 MAAPVMQGVGATTALSSVNYKNYCFASRRSLPERKTSFFFIHCDXXXXXXXXXXXXXXXX 44
           MAA ++ GVGATTALSS+NY N    SRRSLPERK +   I CD                
Sbjct: 1   MAATILHGVGATTALSSINYNN----SRRSLPERKRTSLVIQCDGSLSSGLNISNNRGAK 56

Query: 43  XXXXAVA-TKQDNVT 2
               AVA +KQ+NVT
Sbjct: 57  LSTNAVAQSKQENVT 71


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