BLASTX nr result
ID: Rehmannia32_contig00007148
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia32_contig00007148
(374 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020551710.1| protein RETICULATA-RELATED 1, chloroplastic ... 105 8e-24
gb|PIN23938.1| hypothetical protein CDL12_03334 [Handroanthus im... 99 1e-21
gb|PIN20055.1| hypothetical protein CDL12_07253 [Handroanthus im... 89 3e-18
ref|XP_022896982.1| protein RETICULATA-RELATED 1, chloroplastic-... 80 6e-15
ref|XP_022855108.1| protein RETICULATA-RELATED 1, chloroplastic-... 76 2e-13
ref|XP_022855107.1| protein RETICULATA-RELATED 1, chloroplastic-... 76 2e-13
ref|XP_019173592.1| PREDICTED: protein RETICULATA-RELATED 1, chl... 69 3e-11
ref|XP_015055835.1| PREDICTED: protein RETICULATA-RELATED 1, chl... 68 1e-10
ref|XP_019169722.1| PREDICTED: protein RETICULATA-RELATED 1, chl... 67 2e-10
ref|XP_019169721.1| PREDICTED: protein RETICULATA-RELATED 1, chl... 67 2e-10
ref|XP_004248816.1| PREDICTED: protein RETICULATA-RELATED 1, chl... 67 2e-10
ref|XP_019243612.1| PREDICTED: protein RETICULATA-RELATED 1, chl... 66 4e-10
ref|XP_016495347.1| PREDICTED: uncharacterized protein LOC107814... 65 5e-10
ref|XP_009800611.1| PREDICTED: uncharacterized protein LOC104246... 66 6e-10
ref|XP_006339929.1| PREDICTED: protein RETICULATA-RELATED 1, chl... 66 6e-10
ref|XP_009621706.1| PREDICTED: protein RETICULATA-RELATED 1, chl... 65 8e-10
ref|XP_009761238.1| PREDICTED: uncharacterized protein LOC104213... 65 1e-09
ref|XP_016456433.1| PREDICTED: protein RETICULATA-RELATED 1, chl... 62 2e-08
ref|XP_009630601.1| PREDICTED: protein RETICULATA-RELATED 1, chl... 62 2e-08
gb|KZV22728.1| hypothetical protein F511_05360 [Dorcoceras hygro... 60 8e-08
>ref|XP_020551710.1| protein RETICULATA-RELATED 1, chloroplastic [Sesamum indicum]
Length = 530
Score = 105 bits (261), Expect = 8e-24
Identities = 58/92 (63%), Positives = 63/92 (68%), Gaps = 3/92 (3%)
Frame = +3
Query: 108 MSHSVFQTAQIMPLAXXXXXXXXXXXXXXXXVFRHSVLPPAAGKLRKCYLTIKASSSAVV 287
MSHSVFQTAQIMPLA FR +V P AGKLR+C T+KASSSAVV
Sbjct: 1 MSHSVFQTAQIMPLAPTPNTLSSKSLLPTTATFRSTVSPAVAGKLRRCCFTVKASSSAVV 60
Query: 288 DGDAIASLERCFQASP---DAPSSTPSCSADF 374
D DA+ASLERCFQASP DAPSST S +ADF
Sbjct: 61 DDDAVASLERCFQASPPAADAPSSTSSSTADF 92
>gb|PIN23938.1| hypothetical protein CDL12_03334 [Handroanthus impetiginosus]
Length = 533
Score = 99.0 bits (245), Expect = 1e-21
Identities = 56/90 (62%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Frame = +3
Query: 108 MSHSVFQTAQIMPLAXXXXXXXXXXXXXXXXVFRHSVLPPAAGKLRKCYLTIKASSSAVV 287
MSHSVFQTAQIMPLA VFR VLPP+A K+RKC LT++ASSSAVV
Sbjct: 1 MSHSVFQTAQIMPLAPTPKTLSSKPLLPTAAVFRSPVLPPSASKIRKCCLTVRASSSAVV 60
Query: 288 DGDAIASLERCFQA-SPDAPSSTPSCSADF 374
D DAIASLERCFQA + DAP+S+ S A F
Sbjct: 61 DEDAIASLERCFQAPAADAPTSSSSGPAVF 90
>gb|PIN20055.1| hypothetical protein CDL12_07253 [Handroanthus impetiginosus]
Length = 530
Score = 89.4 bits (220), Expect = 3e-18
Identities = 56/92 (60%), Positives = 58/92 (63%), Gaps = 3/92 (3%)
Frame = +3
Query: 108 MSHSVFQTAQIMPLAXXXXXXXXXXXXXXXXVFRHSVLPPAAGKLRKCYLTIKASSSAVV 287
MSH VFQTA LA VFR PP +GKLRKC LTIKASSSAVV
Sbjct: 1 MSHLVFQTA----LAPIPNTLSSKSLLPPTTVFRCPFSPPVSGKLRKCCLTIKASSSAVV 56
Query: 288 DGDAIASLERCFQAS---PDAPSSTPSCSADF 374
DGDAIA LERCFQAS DAPSST S SA+F
Sbjct: 57 DGDAIAHLERCFQASLPVEDAPSSTASSSANF 88
>ref|XP_022896982.1| protein RETICULATA-RELATED 1, chloroplastic-like [Olea europaea
var. sylvestris]
Length = 532
Score = 80.1 bits (196), Expect = 6e-15
Identities = 52/91 (57%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Frame = +3
Query: 108 MSHSVFQTAQIMPLAXXXXXXXXXXXXXXXXVFRHSVLPPAAGKLRKCYLTIKASSSAVV 287
MSH VFQTAQIMP+A + R V PP A KLRK TIKASS AVV
Sbjct: 1 MSHIVFQTAQIMPIAPITKTLSSKPSLPAG-LERPPVAPPIAVKLRKSSFTIKASS-AVV 58
Query: 288 DGDAIASLERCFQASP--DAPSSTPSCSADF 374
DGD IA LERCFQ SP D PS +PS S DF
Sbjct: 59 DGDVIAGLERCFQTSPARDVPSPSPSGSLDF 89
>ref|XP_022855108.1| protein RETICULATA-RELATED 1, chloroplastic-like isoform X2 [Olea
europaea var. sylvestris]
Length = 477
Score = 75.9 bits (185), Expect = 2e-13
Identities = 49/91 (53%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Frame = +3
Query: 108 MSHSVFQTAQIMPLAXXXXXXXXXXXXXXXXVFRHSVLPPAAGKLRKCYLTIKASSSAVV 287
MSH+VFQTAQIMP+A + V PP AGKLRK +T KAS AVV
Sbjct: 1 MSHAVFQTAQIMPVAPITKTLSSKPLLPAGLHWS-PVAPPIAGKLRKSSVTTKASY-AVV 58
Query: 288 DGDAIASLERCFQASP--DAPSSTPSCSADF 374
DGD IA LERCFQASP D PS++P DF
Sbjct: 59 DGDVIAGLERCFQASPAADFPSASPLGYVDF 89
>ref|XP_022855107.1| protein RETICULATA-RELATED 1, chloroplastic-like isoform X1 [Olea
europaea var. sylvestris]
Length = 532
Score = 75.9 bits (185), Expect = 2e-13
Identities = 49/91 (53%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Frame = +3
Query: 108 MSHSVFQTAQIMPLAXXXXXXXXXXXXXXXXVFRHSVLPPAAGKLRKCYLTIKASSSAVV 287
MSH+VFQTAQIMP+A + V PP AGKLRK +T KAS AVV
Sbjct: 1 MSHAVFQTAQIMPVAPITKTLSSKPLLPAGLHWS-PVAPPIAGKLRKSSVTTKASY-AVV 58
Query: 288 DGDAIASLERCFQASP--DAPSSTPSCSADF 374
DGD IA LERCFQASP D PS++P DF
Sbjct: 59 DGDVIAGLERCFQASPAADFPSASPLGYVDF 89
>ref|XP_019173592.1| PREDICTED: protein RETICULATA-RELATED 1, chloroplastic [Ipomoea
nil]
Length = 534
Score = 69.3 bits (168), Expect = 3e-11
Identities = 49/93 (52%), Positives = 57/93 (61%), Gaps = 6/93 (6%)
Frame = +3
Query: 108 MSHSVFQTAQIMPLAXXXXXXXXXXXXXXXXVFRHSVLPPAA----GKLRKCYLTIKASS 275
MSHSVFQ QIMP+ F +LPPAA GKLRK + IKASS
Sbjct: 1 MSHSVFQAVQIMPIHTQTSKSLPSSS------FLKPLLPPAAPVVAGKLRK-FCLIKASS 53
Query: 276 SAVVDGDAIASLERCFQASP--DAPSSTPSCSA 368
AVVDGD IA+LERCFQASP D+PSS+ S ++
Sbjct: 54 -AVVDGDGIAALERCFQASPSLDSPSSSSSTAS 85
>ref|XP_015055835.1| PREDICTED: protein RETICULATA-RELATED 1, chloroplastic-like
[Solanum pennellii]
Length = 531
Score = 67.8 bits (164), Expect = 1e-10
Identities = 46/88 (52%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Frame = +3
Query: 108 MSHSVFQTAQIMPLAXXXXXXXXXXXXXXXXVFRHSVLPPAAGKLRKCYLTIKASSSAVV 287
MSHSVFQTAQIMP+ V R VL G LRK + I+AS+S V+
Sbjct: 1 MSHSVFQTAQIMPI-NTQLLPTSTKPLFPAIVIRRPVLR-VGGTLRKINV-IRASTSPVI 57
Query: 288 DGDAIASLERCFQASP--DAPSSTPSCS 365
DGDAIA LERCFQA+P D+PSS+ S S
Sbjct: 58 DGDAIAGLERCFQATPSVDSPSSSSSTS 85
>ref|XP_019169722.1| PREDICTED: protein RETICULATA-RELATED 1, chloroplastic-like isoform
X2 [Ipomoea nil]
Length = 542
Score = 67.4 bits (163), Expect = 2e-10
Identities = 45/92 (48%), Positives = 55/92 (59%), Gaps = 8/92 (8%)
Frame = +3
Query: 108 MSHSVFQTAQIMPLAXXXXXXXXXXXXXXXXV-----FRHSVLPPA-AGKLRKCYLTIKA 269
MSH+VFQTAQ+MP+ + LP A AGK+RK I+A
Sbjct: 1 MSHTVFQTAQLMPIYTSTIPTSKVVSSPKQLLHPAGALHRLPLPQAVAGKMRKS--CIRA 58
Query: 270 SSSAVVDGDAIASLERCFQASP--DAPSSTPS 359
SSS+VVDGDA+++LERCFQASP D PSST S
Sbjct: 59 SSSSVVDGDAVSALERCFQASPPADCPSSTSS 90
>ref|XP_019169721.1| PREDICTED: protein RETICULATA-RELATED 1, chloroplastic-like isoform
X1 [Ipomoea nil]
Length = 566
Score = 67.4 bits (163), Expect = 2e-10
Identities = 45/92 (48%), Positives = 55/92 (59%), Gaps = 8/92 (8%)
Frame = +3
Query: 108 MSHSVFQTAQIMPLAXXXXXXXXXXXXXXXXV-----FRHSVLPPA-AGKLRKCYLTIKA 269
MSH+VFQTAQ+MP+ + LP A AGK+RK I+A
Sbjct: 1 MSHTVFQTAQLMPIYTSTIPTSKVVSSPKQLLHPAGALHRLPLPQAVAGKMRKS--CIRA 58
Query: 270 SSSAVVDGDAIASLERCFQASP--DAPSSTPS 359
SSS+VVDGDA+++LERCFQASP D PSST S
Sbjct: 59 SSSSVVDGDAVSALERCFQASPPADCPSSTSS 90
>ref|XP_004248816.1| PREDICTED: protein RETICULATA-RELATED 1, chloroplastic [Solanum
lycopersicum]
Length = 531
Score = 67.0 bits (162), Expect = 2e-10
Identities = 46/88 (52%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Frame = +3
Query: 108 MSHSVFQTAQIMPLAXXXXXXXXXXXXXXXXVFRHSVLPPAAGKLRKCYLTIKASSSAVV 287
MSHSVFQTAQIMP+ V R VL G LRK + I+AS+S V+
Sbjct: 1 MSHSVFQTAQIMPI-NTQLLPTSTKPLFPAIVIRRPVLR-VGGTLRKINV-IRASTSPVI 57
Query: 288 DGDAIASLERCFQASP--DAPSSTPSCS 365
DGDAIA LERCFQA+P D PSS+ S S
Sbjct: 58 DGDAIAGLERCFQATPSVDPPSSSSSTS 85
>ref|XP_019243612.1| PREDICTED: protein RETICULATA-RELATED 1, chloroplastic-like
[Nicotiana attenuata]
gb|OIT07687.1| protein reticulata-related 1, chloroplastic [Nicotiana attenuata]
Length = 539
Score = 66.2 bits (160), Expect = 4e-10
Identities = 45/97 (46%), Positives = 58/97 (59%), Gaps = 10/97 (10%)
Frame = +3
Query: 108 MSHSVFQTAQIMPLAXXXXXXXXXXXXXXXXVFRHSVLPPA-------AGKLRKCY-LTI 263
MSHSVFQTAQIMP+ + +LPP+ AGK+RK + I
Sbjct: 1 MSHSVFQTAQIMPI------NTQIIPSSKPNLSSKPLLPPSLCRPSLFAGKVRKTNGVII 54
Query: 264 KASSSAVVDGDAIASLERCFQASP--DAPSSTPSCSA 368
KA++S VDGD IA+LERCFQASP D+P+S+ S S+
Sbjct: 55 KATASPAVDGDPIAALERCFQASPSIDSPASSSSSSS 91
>ref|XP_016495347.1| PREDICTED: uncharacterized protein LOC107814447 [Nicotiana tabacum]
Length = 254
Score = 65.1 bits (157), Expect = 5e-10
Identities = 44/97 (45%), Positives = 57/97 (58%), Gaps = 10/97 (10%)
Frame = +3
Query: 108 MSHSVFQTAQIMPLAXXXXXXXXXXXXXXXXVFRHSVLPPA-------AGKLRKCY-LTI 263
MSHSVFQTAQIMP+ + +LPP AGK+RK + +
Sbjct: 1 MSHSVFQTAQIMPI------NTQIIPSSKPHLSSKPLLPPLLCRPSVFAGKVRKTNGVIV 54
Query: 264 KASSSAVVDGDAIASLERCFQASP--DAPSSTPSCSA 368
KA++S VDGD IA+LERCFQASP D+P+S+ S S+
Sbjct: 55 KATASPAVDGDPIAALERCFQASPSIDSPASSSSSSS 91
>ref|XP_009800611.1| PREDICTED: uncharacterized protein LOC104246496 [Nicotiana
sylvestris]
ref|XP_016475936.1| PREDICTED: protein RETICULATA-RELATED 1, chloroplastic-like
[Nicotiana tabacum]
Length = 528
Score = 65.9 bits (159), Expect = 6e-10
Identities = 41/87 (47%), Positives = 49/87 (56%)
Frame = +3
Query: 108 MSHSVFQTAQIMPLAXXXXXXXXXXXXXXXXVFRHSVLPPAAGKLRKCYLTIKASSSAVV 287
MSHSVFQTAQ MP+ V P AGKLR+ + IKAS++ +
Sbjct: 1 MSHSVFQTAQFMPI---NTQIVPTSKPLFPAVVIRRPAPVVAGKLRQTNV-IKASTAPAI 56
Query: 288 DGDAIASLERCFQASPDAPSSTPSCSA 368
DGDAI LERCFQASP S +PS S+
Sbjct: 57 DGDAIDGLERCFQASPSIDSPSPSSSS 83
>ref|XP_006339929.1| PREDICTED: protein RETICULATA-RELATED 1, chloroplastic-like
[Solanum tuberosum]
Length = 531
Score = 65.9 bits (159), Expect = 6e-10
Identities = 45/89 (50%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Frame = +3
Query: 108 MSHSVFQTAQIMPLAXXXXXXXXXXXXXXXXVFRHSVLPPAAGKLRKCYLTIKASSSAVV 287
MSHSVFQTAQIMP+ V R VL KLRK + I+AS+S V+
Sbjct: 1 MSHSVFQTAQIMPI-NTQLLPTSTKPLFPAIVIRRPVLG-VGRKLRKINV-IRASTSPVI 57
Query: 288 DGDAIASLERCFQASP-DAPSSTPSCSAD 371
+GDAIA LERCFQASP D+PSS+ S + +
Sbjct: 58 NGDAIAGLERCFQASPVDSPSSSSSSATN 86
>ref|XP_009621706.1| PREDICTED: protein RETICULATA-RELATED 1, chloroplastic-like
[Nicotiana tomentosiformis]
Length = 530
Score = 65.5 bits (158), Expect = 8e-10
Identities = 43/88 (48%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Frame = +3
Query: 108 MSHSVFQTAQIMPLAXXXXXXXXXXXXXXXXVFRHSVLPPAAGKLRKCYLTIKASSSAVV 287
MSHSVFQTAQ MP+ V P AGKLR+ + IKAS++ +
Sbjct: 1 MSHSVFQTAQFMPI---NTQIVPTSKPLFPAVVIRRPAPVVAGKLRQTNV-IKASTAPAI 56
Query: 288 DGDAIASLERCFQASP--DAPSSTPSCS 365
DGDAI LERCFQASP D+PSS+ S S
Sbjct: 57 DGDAIDGLERCFQASPSIDSPSSSSSSS 84
>ref|XP_009761238.1| PREDICTED: uncharacterized protein LOC104213436 [Nicotiana
sylvestris]
Length = 539
Score = 65.1 bits (157), Expect = 1e-09
Identities = 44/97 (45%), Positives = 57/97 (58%), Gaps = 10/97 (10%)
Frame = +3
Query: 108 MSHSVFQTAQIMPLAXXXXXXXXXXXXXXXXVFRHSVLPPA-------AGKLRKCY-LTI 263
MSHSVFQTAQIMP+ + +LPP AGK+RK + +
Sbjct: 1 MSHSVFQTAQIMPI------NTQIIPSSKPHLSSKPLLPPLLCRPSVFAGKVRKTNGVIV 54
Query: 264 KASSSAVVDGDAIASLERCFQASP--DAPSSTPSCSA 368
KA++S VDGD IA+LERCFQASP D+P+S+ S S+
Sbjct: 55 KATASPAVDGDPIAALERCFQASPSIDSPASSSSSSS 91
>ref|XP_016456433.1| PREDICTED: protein RETICULATA-RELATED 1, chloroplastic-like
[Nicotiana tabacum]
Length = 507
Score = 61.6 bits (148), Expect = 2e-08
Identities = 42/92 (45%), Positives = 54/92 (58%), Gaps = 10/92 (10%)
Frame = +3
Query: 108 MSHSVFQTAQIMPLAXXXXXXXXXXXXXXXXVFRHSVLPPA-------AGKLRKCYLTI- 263
MSHSVFQTAQIMP+ + +LPP+ AGK+RK + I
Sbjct: 1 MSHSVFQTAQIMPI------NTQIIPSSKPHLSSKPLLPPSLCRPSLFAGKVRKTNVVII 54
Query: 264 KASSSAVVDGDAIASLERCFQASP--DAPSST 353
KA++S VDGD +A LERCFQASP D+P+S+
Sbjct: 55 KATASPAVDGDPMAVLERCFQASPSLDSPASS 86
>ref|XP_009630601.1| PREDICTED: protein RETICULATA-RELATED 1, chloroplastic-like
[Nicotiana tomentosiformis]
Length = 533
Score = 61.6 bits (148), Expect = 2e-08
Identities = 42/92 (45%), Positives = 54/92 (58%), Gaps = 10/92 (10%)
Frame = +3
Query: 108 MSHSVFQTAQIMPLAXXXXXXXXXXXXXXXXVFRHSVLPPA-------AGKLRKCYLTI- 263
MSHSVFQTAQIMP+ + +LPP+ AGK+RK + I
Sbjct: 1 MSHSVFQTAQIMPI------NTQIIPSSKPHLSSKPLLPPSLCRPSLFAGKVRKTNVVII 54
Query: 264 KASSSAVVDGDAIASLERCFQASP--DAPSST 353
KA++S VDGD +A LERCFQASP D+P+S+
Sbjct: 55 KATASPAVDGDPMAVLERCFQASPSLDSPASS 86
>gb|KZV22728.1| hypothetical protein F511_05360 [Dorcoceras hygrometricum]
Length = 510
Score = 59.7 bits (143), Expect = 8e-08
Identities = 38/79 (48%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Frame = +3
Query: 108 MSHSVFQTAQIMPLAXXXXXXXXXXXXXXXXVFRHSVLPPAAGKL---RKCYLTIKASSS 278
M H+VF+T QIMP+A ++LPPAA R+ L IKASSS
Sbjct: 1 MGHTVFRTGQIMPVAPTHKTL--------------TLLPPAAFHRYLKRRGVLRIKASSS 46
Query: 279 AVVDGDAIASLERCFQASP 335
AVVDGDA+A LERCF A+P
Sbjct: 47 AVVDGDAVARLERCFLATP 65